Guide to the Human Genome
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Name: ZFYVE16 Sequence: fasta or formatted (1539aa) NCBI GI: 157426864
Description:

zinc finger, FYVE domain containing 16

Referenced in:

Lysosomes and Related Organelles
TGF-beta Family
Zinc Finger Proteins

Other entries for this name:
alt mRNA [1539aa] zinc finger, FYVE domain containing 16
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4         67           2
 C cysteine            2.7         42           2
 D aspartate           7.6        117           3
 E glutamate           7.3        112           2
 F phenylalanine       3.7         57           2
 G glycine             5.9         91           2
 H histidine           2.0         31           2
 I isoleucine          6.4         98           3
 K lysine              6.6        101           2
 L leucine             9.7        149           3
 M methionine          1.7         26           2
 N asparagine          5.7         87           2
 P proline             4.6         71           2
 Q glutamine           4.3         66           2
 R arginine            2.2         34           2
 S serine             11.3        174           3
 T threonine           5.7         88           2
 V valine              6.0         93           2
 W tryptophan          0.3          5           1
 Y tyrosine            1.9         30           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, FYVE domain containing 16 
ZFYVE16               1.000   zinc finger, FYVE domain containing 16 
ZFYVE9                0.226   zinc finger, FYVE domain containing 9 isoform 3 [Hom...
ZFYVE9                0.183   zinc finger, FYVE domain containing 9 isoform 1 [Hom...
ZFYVE9                0.036   zinc finger, FYVE domain containing 9 isoform 2 [Homo...
FGD6                  0.020   FYVE, RhoGEF and PH domain containing 6 
MTMR4                 0.016   myotubularin related protein 4 
FGD5                  0.016   FYVE, RhoGEF and PH domain containing 5 
ZFYVE21               0.016   zinc finger, FYVE domain containing 21 
HGS                   0.015   hepatocyte growth factor-regulated tyrosine kinase su...
PIKFYVE               0.015   phosphatidylinositol-3-phosphate 5-kinase type III ...
FGD4                  0.015   FYVE, RhoGEF and PH domain containing 4 
FYCO1                 0.015   FYVE and coiled-coil domain containing 1 
PLEKHF2               0.015   phafin 2 
MTMR3                 0.014   myotubularin-related protein 3 isoform b 
MTMR3                 0.014   myotubularin-related protein 3 isoform c 
RUFY2                 0.014   RUN and FYVE domain-containing 2 isoform a 
FGD1                  0.014   faciogenital dysplasia protein 
FGD2                  0.014   FYVE, RhoGEF and PH domain containing 2 
RUFY1                 0.013   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.013   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.013   RUN and FYVE domain-containing 1 isoform a 
ZFYVE28               0.013   zinc finger, FYVE domain containing 28 
ZFYVE26               0.013   zinc finger, FYVE domain containing 26 
EEA1                  0.013   early endosome antigen 1, 162kD 
DSPP                  0.012   dentin sialophosphoprotein preproprotein 
WDFY3                 0.012   WD repeat and FYVE domain containing 3 isoform 3 [Ho...
WDFY3                 0.012   WD repeat and FYVE domain containing 3 isoform 1 [Ho...
PLEKHF1               0.012   apoptosis-inducing protein D 
MTMR3                 0.011   myotubularin-related protein 3 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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