Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZFYVE26 Sequence: fasta or formatted (2539aa) NCBI GI: 38202205
Description:

zinc finger, FYVE domain containing 26

Referenced in:

Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5        191           4
 C cysteine            3.3         83           3
 D aspartate           4.5        113           3
 E glutamate           7.6        194           3
 F phenylalanine       2.8         72           2
 G glycine             4.3        110           3
 H histidine           3.3         83           2
 I isoleucine          3.2         81           2
 K lysine              4.3        109           2
 L leucine            14.3        362           3
 M methionine          1.6         40           2
 N asparagine          2.5         64           2
 P proline             6.0        153           2
 Q glutamine           6.0        153           2
 R arginine            5.9        149           2
 S serine              9.5        242           3
 T threonine           4.4        111           2
 V valine              5.3        135           2
 W tryptophan          1.3         32           1
 Y tyrosine            2.4         62           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, FYVE domain containing 26 
PLEKHF2               0.010   phafin 2 
PLEKHF1               0.010   apoptosis-inducing protein D 
FGD6                  0.010   FYVE, RhoGEF and PH domain containing 6 
ZFYVE16               0.008   zinc finger, FYVE domain containing 16 
ZFYVE16               0.008   zinc finger, FYVE domain containing 16 
FGD2                  0.008   FYVE, RhoGEF and PH domain containing 2 
ZFYVE28               0.007   zinc finger, FYVE domain containing 28 
HGS                   0.007   hepatocyte growth factor-regulated tyrosine kinase su...
RUFY1                 0.007   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.007   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.007   RUN and FYVE domain-containing 1 isoform a 
ZFYVE9                0.007   zinc finger, FYVE domain containing 9 isoform 3 [Hom...
EEA1                  0.007   early endosome antigen 1, 162kD 
MTMR3                 0.007   myotubularin-related protein 3 isoform b 
MTMR3                 0.007   myotubularin-related protein 3 isoform c 
ZFYVE9                0.007   zinc finger, FYVE domain containing 9 isoform 1 [Hom...
ZFYVE9                0.007   zinc finger, FYVE domain containing 9 isoform 2 [Homo...
WDFY3                 0.006   WD repeat and FYVE domain containing 3 isoform 3 [Ho...
WDFY3                 0.006   WD repeat and FYVE domain containing 3 isoform 1 [Ho...
RUFY2                 0.006   RUN and FYVE domain-containing 2 isoform a 
MTMR4                 0.006   myotubularin related protein 4 
FGD5                  0.006   FYVE, RhoGEF and PH domain containing 5 
ZFYVE21               0.006   zinc finger, FYVE domain containing 21 
FGD1                  0.006   faciogenital dysplasia protein 
FGD4                  0.006   FYVE, RhoGEF and PH domain containing 4 
ANKFY1                0.006   ankyrin repeat and FYVE domain containing 1 isoform...
ZFYVE1                0.006   zinc finger, FYVE domain containing 1 isoform 2 [Hom...
ZFYVE1                0.006   zinc finger, FYVE domain containing 1 isoform 1 [Hom...
HIVEP2                0.006   human immunodeficiency virus type I enhancer bindin...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press