Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZFYVE9 Sequence: fasta or formatted (1366aa) NCBI GI: 47717112
Description:

zinc finger, FYVE domain containing 9 isoform 1

Referenced in:

TGF-beta Family

Other entries for this name:
alt prot [1425aa] zinc finger, FYVE domain containing 9 isoform 3
alt prot [762aa] zinc finger, FYVE domain containing 9 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         77           2
 C cysteine            3.3         45           2
 D aspartate           6.4         88           3
 E glutamate           7.2         98           3
 F phenylalanine       3.4         47           2
 G glycine             6.2         85           2
 H histidine           2.3         31           2
 I isoleucine          4.0         55           1
 K lysine              5.7         78           2
 L leucine             9.2        126           3
 M methionine          2.6         36           2
 N asparagine          6.5         89           2
 P proline             5.6         77           2
 Q glutamine           4.3         59           2
 R arginine            3.1         42           2
 S serine              9.5        130           3
 T threonine           5.1         70           2
 V valine              6.7         92           2
 W tryptophan          0.8         11           1
 Y tyrosine            2.2         30           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger, FYVE domain containing 9 isoform 1 [Hom... 
ZFYVE9                0.974   zinc finger, FYVE domain containing 9 isoform 3 [Hom...
ZFYVE9                0.555   zinc finger, FYVE domain containing 9 isoform 2 [Homo...
ZFYVE16               0.202   zinc finger, FYVE domain containing 16 
ZFYVE16               0.202   zinc finger, FYVE domain containing 16 
FGD6                  0.022   FYVE, RhoGEF and PH domain containing 6 
FGD2                  0.018   FYVE, RhoGEF and PH domain containing 2 
FGD4                  0.018   FYVE, RhoGEF and PH domain containing 4 
ZFYVE21               0.017   zinc finger, FYVE domain containing 21 
PLEKHF2               0.016   phafin 2 
FGD1                  0.016   faciogenital dysplasia protein 
PIKFYVE               0.016   phosphatidylinositol-3-phosphate 5-kinase type III ...
ZFYVE28               0.015   zinc finger, FYVE domain containing 28 
MTMR4                 0.015   myotubularin related protein 4 
MTMR3                 0.015   myotubularin-related protein 3 isoform b 
FGD5                  0.015   FYVE, RhoGEF and PH domain containing 5 
MTMR3                 0.015   myotubularin-related protein 3 isoform c 
RUFY2                 0.015   RUN and FYVE domain-containing 2 isoform a 
PLEKHF1               0.015   apoptosis-inducing protein D 
RUFY1                 0.015   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.015   RUN and FYVE domain-containing 1 isoform b 
RUFY1                 0.015   RUN and FYVE domain-containing 1 isoform a 
EEA1                  0.015   early endosome antigen 1, 162kD 
MTMR3                 0.012   myotubularin-related protein 3 isoform a 
ZFYVE26               0.012   zinc finger, FYVE domain containing 26 
FYCO1                 0.012   FYVE and coiled-coil domain containing 1 
HGS                   0.012   hepatocyte growth factor-regulated tyrosine kinase su...
WDFY3                 0.012   WD repeat and FYVE domain containing 3 isoform 3 [Ho...
WDFY3                 0.012   WD repeat and FYVE domain containing 3 isoform 1 [Ho...
ANKFY1                0.012   ankyrin repeat and FYVE domain containing 1 isoform...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press