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Search of human proteins with 157388997
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157388997 protein-L-isoaspartate (D-aspartate)
O-methyltransferase domain containing 2 isoform 2 [Homo sapiens]
(334 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157388997 protein-L-isoaspartate (D-aspartate) O-methyltransf... 678 0.0
gi|157388995 protein-L-isoaspartate (D-aspartate) O-methyltransf... 663 0.0
gi|190360566 protein-L-isoaspartate (D-aspartate) O-methyltransf... 435 e-122
gi|239757983 PREDICTED: similar to protein-L-isoaspartate (D-asp... 97 2e-20
gi|239747889 PREDICTED: hypothetical protein XP_002346467 [Homo ... 97 2e-20
gi|239752574 PREDICTED: hypothetical protein XP_002348296 [Homo ... 88 9e-18
gi|239758102 PREDICTED: similar to protein-L-isoaspartate (D-asp... 84 2e-16
gi|239756570 PREDICTED: similar to protein-L-isoaspartate (D-asp... 81 1e-15
gi|239752577 PREDICTED: hypothetical protein XP_002348294 [Homo ... 81 1e-15
gi|239745549 PREDICTED: hypothetical protein XP_002343514 [Homo ... 81 1e-15
gi|226530908 protein-L-isoaspartate (D-aspartate) O-methyltransf... 52 7e-07
gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens] 38 0.014
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa... 35 0.072
gi|166197690 neuronal guanine nucleotide exchange factor isoform... 34 0.16
gi|166197688 neuronal guanine nucleotide exchange factor isoform... 34 0.16
gi|187761324 shootin1 isoform a [Homo sapiens] 33 0.27
gi|50511340 shootin1 isoform b [Homo sapiens] 33 0.27
gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens] 32 0.61
gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens] 32 0.61
gi|123173772 tRNA(m1A58)-methyltransferase subunit TRM61 [Homo s... 32 0.79
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo... 32 0.79
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo... 32 0.79
gi|12056465 fibrillarin [Homo sapiens] 31 1.4
gi|61966703 NHS-like 2 [Homo sapiens] 31 1.4
gi|16507239 wingless-type MMTV integration site family, member 6... 31 1.8
gi|83716024 kinesin family member 21B [Homo sapiens] 31 1.8
gi|6912398 general transcription factor IIIC, polypeptide 3, 102... 31 1.8
gi|23346412 cysteine-serine-rich nuclear protein 3 [Homo sapiens] 30 3.9
gi|110815815 centlein isoform 1 [Homo sapiens] 30 3.9
gi|68077166 DnaJ homology subfamily A member 5 isoform 2 [Homo s... 30 3.9
>gi|157388997 protein-L-isoaspartate (D-aspartate)
O-methyltransferase domain containing 2 isoform 2 [Homo
sapiens]
Length = 334
Score = 678 bits (1749), Expect = 0.0
Identities = 334/334 (100%), Positives = 334/334 (100%)
Query: 1 MGGAVSAGEDNDELIDNLKEAQYIRTELVEQAFRAIDRADYYLEEFKENAYKDLAWKHGN 60
MGGAVSAGEDNDELIDNLKEAQYIRTELVEQAFRAIDRADYYLEEFKENAYKDLAWKHGN
Sbjct: 1 MGGAVSAGEDNDELIDNLKEAQYIRTELVEQAFRAIDRADYYLEEFKENAYKDLAWKHGN 60
Query: 61 IHLSAPCIYSEVMEALDLQPGLSFLNLGSGTGYLSSMVGLILGPFGVNHGVELHSDVIEY 120
IHLSAPCIYSEVMEALDLQPGLSFLNLGSGTGYLSSMVGLILGPFGVNHGVELHSDVIEY
Sbjct: 61 IHLSAPCIYSEVMEALDLQPGLSFLNLGSGTGYLSSMVGLILGPFGVNHGVELHSDVIEY 120
Query: 121 AKQKLDFFIRTSDSFDKFDFCEPSFVTGNCLEISPDCSQYDRVYCGAGVQKEHEEYMKNL 180
AKQKLDFFIRTSDSFDKFDFCEPSFVTGNCLEISPDCSQYDRVYCGAGVQKEHEEYMKNL
Sbjct: 121 AKQKLDFFIRTSDSFDKFDFCEPSFVTGNCLEISPDCSQYDRVYCGAGVQKEHEEYMKNL 180
Query: 181 LKVGGILVMPLEEKPCHSESGKSRLVQLPPVAVRSLQDLARIAIRGTIKKIIHQETVSKN 240
LKVGGILVMPLEEKPCHSESGKSRLVQLPPVAVRSLQDLARIAIRGTIKKIIHQETVSKN
Sbjct: 181 LKVGGILVMPLEEKPCHSESGKSRLVQLPPVAVRSLQDLARIAIRGTIKKIIHQETVSKN 240
Query: 241 GNGLKNTPRFKRRRVRRRRMETIVFLDKEVFASRISNPSDDNSCEDLEEERREEEEKTPP 300
GNGLKNTPRFKRRRVRRRRMETIVFLDKEVFASRISNPSDDNSCEDLEEERREEEEKTPP
Sbjct: 241 GNGLKNTPRFKRRRVRRRRMETIVFLDKEVFASRISNPSDDNSCEDLEEERREEEEKTPP 300
Query: 301 ETKPDPPVNFLRQKVLSLPLPDPLKYYLLYYREK 334
ETKPDPPVNFLRQKVLSLPLPDPLKYYLLYYREK
Sbjct: 301 ETKPDPPVNFLRQKVLSLPLPDPLKYYLLYYREK 334
>gi|157388995 protein-L-isoaspartate (D-aspartate)
O-methyltransferase domain containing 2 isoform 1 [Homo
sapiens]
Length = 361
Score = 663 bits (1711), Expect = 0.0
Identities = 334/361 (92%), Positives = 334/361 (92%), Gaps = 27/361 (7%)
Query: 1 MGGAVSAGEDNDELIDNLKEAQYIRTELVEQAFRAIDRADYYLEEFKENAYKDLAWKHGN 60
MGGAVSAGEDNDELIDNLKEAQYIRTELVEQAFRAIDRADYYLEEFKENAYKDLAWKHGN
Sbjct: 1 MGGAVSAGEDNDELIDNLKEAQYIRTELVEQAFRAIDRADYYLEEFKENAYKDLAWKHGN 60
Query: 61 IHLSAPCIYSEVMEALDLQPGLSFLNLGSGTGYLSSMVGLILGPFGVNHGVELHSDVIEY 120
IHLSAPCIYSEVMEALDLQPGLSFLNLGSGTGYLSSMVGLILGPFGVNHGVELHSDVIEY
Sbjct: 61 IHLSAPCIYSEVMEALDLQPGLSFLNLGSGTGYLSSMVGLILGPFGVNHGVELHSDVIEY 120
Query: 121 AKQKLDFFIRTSDSFDKFDFCEPSFVTGNCLEISPDCSQYDRVYCGAGVQKEHEEYMKNL 180
AKQKLDFFIRTSDSFDKFDFCEPSFVTGNCLEISPDCSQYDRVYCGAGVQKEHEEYMKNL
Sbjct: 121 AKQKLDFFIRTSDSFDKFDFCEPSFVTGNCLEISPDCSQYDRVYCGAGVQKEHEEYMKNL 180
Query: 181 LKVGGILVMPLEEK---------------------------PCHSESGKSRLVQLPPVAV 213
LKVGGILVMPLEEK PCHSESGKSRLVQLPPVAV
Sbjct: 181 LKVGGILVMPLEEKLTKITRTGPSAWETKKILAVSFAPLIQPCHSESGKSRLVQLPPVAV 240
Query: 214 RSLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETIVFLDKEVFAS 273
RSLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETIVFLDKEVFAS
Sbjct: 241 RSLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETIVFLDKEVFAS 300
Query: 274 RISNPSDDNSCEDLEEERREEEEKTPPETKPDPPVNFLRQKVLSLPLPDPLKYYLLYYRE 333
RISNPSDDNSCEDLEEERREEEEKTPPETKPDPPVNFLRQKVLSLPLPDPLKYYLLYYRE
Sbjct: 301 RISNPSDDNSCEDLEEERREEEEKTPPETKPDPPVNFLRQKVLSLPLPDPLKYYLLYYRE 360
Query: 334 K 334
K
Sbjct: 361 K 361
>gi|190360566 protein-L-isoaspartate (D-aspartate)
O-methyltransferase domain containing 1 [Homo sapiens]
Length = 357
Score = 435 bits (1119), Expect = e-122
Identities = 226/363 (62%), Positives = 273/363 (75%), Gaps = 35/363 (9%)
Query: 1 MGGAVSAGEDNDELIDNLKEAQYIRTELVEQAFRAIDRADYYLEEFKENAYKDLAWKHGN 60
MGGAVSAGEDND+LIDNLKEAQYIRTE VEQAFRAIDR DYYLE +++NAYKDLAWKHGN
Sbjct: 1 MGGAVSAGEDNDDLIDNLKEAQYIRTERVEQAFRAIDRGDYYLEGYRDNAYKDLAWKHGN 60
Query: 61 IHLSAPCIYSEVMEALDLQPGLSFLNLGSGTGYLSSMVGLILGPFGVNHGVELHSDVIEY 120
IHLSAPCIYSEVMEAL LQPGLSFLNLGSGTGYLS+MVGLILGPFG+NHG+ELHSDV+EY
Sbjct: 61 IHLSAPCIYSEVMEALKLQPGLSFLNLGSGTGYLSTMVGLILGPFGINHGIELHSDVVEY 120
Query: 121 AKQKLDFFIRTSDSFDKFDFCEPSFVTGNCLEISPDCSQYDRVYCGAGVQKEHEEYMKNL 180
AK+KL+ FI+ SDSFDKF+FCEP+FV GNCL+I+ D QYDR+YCGAGVQK+HE YMK L
Sbjct: 121 AKEKLESFIKNSDSFDKFEFCEPAFVVGNCLQIASDSHQYDRIYCGAGVQKDHENYMKIL 180
Query: 181 LKVGGILVMPLEE---------------------------KPCHSESGKSRLVQLPPVAV 213
LKVGGILVMP+E+ +P +++GK V LPP AV
Sbjct: 181 LKVGGILVMPIEDQLTQIMRTGQNTWESKNILAVSFAPLVQPSKNDNGKPDSVGLPPCAV 240
Query: 214 RSLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETIVFLDKEVFAS 273
R+LQDLARI IR T++ I+ E +K G + P+ KR+RV ++R+ T VF+ ++
Sbjct: 241 RNLQDLARIYIRRTLRNFINDEMQAK-GIPQRAPPKRKRKRV-KQRINTYVFVGNQL--- 295
Query: 274 RISNPSDDNSCEDLEEERREEEEKTPPET-KP-DPPVNFLRQKVLSLPLPDPLKYYLLYY 331
I P D E +EE+ +EEEEK E KP +PP N LR+K++ LPLP+ LK YL Y+
Sbjct: 296 -IPQPLDSEEDEKMEEDNKEEEEKDHNEAMKPEEPPQNLLREKIMKLPLPESLKAYLTYF 354
Query: 332 REK 334
R+K
Sbjct: 355 RDK 357
>gi|239757983 PREDICTED: similar to protein-L-isoaspartate
(D-aspartate) O-methyltransferase domain containing 1
[Homo sapiens]
Length = 132
Score = 97.4 bits (241), Expect = 2e-20
Identities = 58/133 (43%), Positives = 85/133 (63%), Gaps = 8/133 (6%)
Query: 204 RLVQLPPVAVRSLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETI 263
R + +PP AVR+LQDLA I IR T++K + E +K G + P+ KR+R ++R + T
Sbjct: 6 RALGIPPSAVRNLQDLALIYIRRTLRKFTNDEMQAK-GIPQRAPPKRKRKRAKQR-ITTY 63
Query: 264 VFLDKEVFASRISNPSDDNSCEDLEEERREEEEKTPPET-KPD-PPVNFLRQKVLSLPLP 321
VF+ ++ I P D E++EE+ +EEEEK E KP+ PP N LR+K++ LPLP
Sbjct: 64 VFVGNQL----IPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLP 119
Query: 322 DPLKYYLLYYREK 334
+ LK YL Y+R+K
Sbjct: 120 ESLKAYLTYFRDK 132
>gi|239747889 PREDICTED: hypothetical protein XP_002346467 [Homo
sapiens]
Length = 132
Score = 97.4 bits (241), Expect = 2e-20
Identities = 58/133 (43%), Positives = 85/133 (63%), Gaps = 8/133 (6%)
Query: 204 RLVQLPPVAVRSLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETI 263
R + +PP AVR+LQDLA I IR T++K + E +K G + P+ KR+R ++R + T
Sbjct: 6 RALGIPPSAVRNLQDLALIYIRRTLRKFTNDEMQAK-GIPQRAPPKRKRKRAKQR-ITTY 63
Query: 264 VFLDKEVFASRISNPSDDNSCEDLEEERREEEEKTPPET-KPD-PPVNFLRQKVLSLPLP 321
VF+ ++ I P D E++EE+ +EEEEK E KP+ PP N LR+K++ LPLP
Sbjct: 64 VFVGNQL----IPQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQNLLREKIMKLPLP 119
Query: 322 DPLKYYLLYYREK 334
+ LK YL Y+R+K
Sbjct: 120 ESLKAYLTYFRDK 132
>gi|239752574 PREDICTED: hypothetical protein XP_002348296 [Homo
sapiens]
Length = 164
Score = 88.2 bits (217), Expect = 9e-18
Identities = 55/126 (43%), Positives = 79/126 (62%), Gaps = 8/126 (6%)
Query: 211 VAVRSLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETIVFLDKEV 270
V VR+LQDLARI IR T++ I+ E +K G + P+ KR+RV++R + T VF+ ++
Sbjct: 45 VTVRNLQDLARIYIRCTLRNFINDEMQAK-GIPQRAPPKRKRKRVKQR-ITTYVFVGNQL 102
Query: 271 FASRISNPSDDNSCEDLEEERREEEEKTPPET-KPD-PPVNFLRQKVLSLPLPDPLKYYL 328
I P D E +EE+ +EEEEK E KP+ PP N L +K++ L LP+ LK YL
Sbjct: 103 ----IPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYL 158
Query: 329 LYYREK 334
Y+R+K
Sbjct: 159 TYFRDK 164
>gi|239758102 PREDICTED: similar to protein-L-isoaspartate
(D-aspartate) O-methyltransferase domain containing 1
[Homo sapiens]
Length = 118
Score = 83.6 bits (205), Expect = 2e-16
Identities = 52/122 (42%), Positives = 76/122 (62%), Gaps = 8/122 (6%)
Query: 215 SLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETIVFLDKEVFASR 274
+LQDLARI IR T++ I+ E +K G + P+ KR+RV++R + T VF+ ++
Sbjct: 3 NLQDLARIYIRRTLRNFINDEMQAK-GIPQRAPPKRKRKRVKQR-ITTYVFVGNQL---- 56
Query: 275 ISNPSDDNSCEDLEEERREEEEKTPPET-KPD-PPVNFLRQKVLSLPLPDPLKYYLLYYR 332
I P D E +EE+ +EEEEK E KP+ PP N L +K++ L LP+ LK YL Y+R
Sbjct: 57 IPQPLDSEEDEKMEEDNKEEEEKDHSEAMKPEEPPQNLLTEKIMKLTLPESLKAYLTYFR 116
Query: 333 EK 334
+K
Sbjct: 117 DK 118
>gi|239756570 PREDICTED: similar to protein-L-isoaspartate
(D-aspartate) O-methyltransferase domain containing 1
[Homo sapiens]
Length = 150
Score = 80.9 bits (198), Expect = 1e-15
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 8/126 (6%)
Query: 211 VAVRSLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETIVFLDKEV 270
+ VR+LQDLA I IR T++ I+ E +K G + P+ KR+RV++R + + V
Sbjct: 31 ITVRNLQDLALIYIRRTLRNFINDEMQAK-GIPQRAPPKRKRKRVKQR-----ITIYVCV 84
Query: 271 FASRISNPSDDNSCEDLEEERREEEEKTPPET-KPD-PPVNFLRQKVLSLPLPDPLKYYL 328
I P D E++EE+ +EEEEK E KP+ PP L +K++ LPLP+ LK YL
Sbjct: 85 CNQLILQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQYLLTEKIMKLPLPESLKAYL 144
Query: 329 LYYREK 334
Y+R+K
Sbjct: 145 TYFRDK 150
>gi|239752577 PREDICTED: hypothetical protein XP_002348294 [Homo
sapiens]
Length = 150
Score = 80.9 bits (198), Expect = 1e-15
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 8/126 (6%)
Query: 211 VAVRSLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETIVFLDKEV 270
+ VR+LQDLA I IR T++ I+ E +K G + P+ KR+RV++R + + V
Sbjct: 31 ITVRNLQDLALIYIRRTLRNFINDEMQAK-GIPQRAPPKRKRKRVKQR-----ITIYVCV 84
Query: 271 FASRISNPSDDNSCEDLEEERREEEEKTPPET-KPD-PPVNFLRQKVLSLPLPDPLKYYL 328
I P D E++EE+ +EEEEK E KP+ PP L +K++ LPLP+ LK YL
Sbjct: 85 CNQLILQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQYLLTEKIMKLPLPESLKAYL 144
Query: 329 LYYREK 334
Y+R+K
Sbjct: 145 TYFRDK 150
>gi|239745549 PREDICTED: hypothetical protein XP_002343514 [Homo
sapiens]
Length = 150
Score = 80.9 bits (198), Expect = 1e-15
Identities = 51/126 (40%), Positives = 75/126 (59%), Gaps = 8/126 (6%)
Query: 211 VAVRSLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETIVFLDKEV 270
+ VR+LQDLA I IR T++ I+ E +K G + P+ KR+RV++R + + V
Sbjct: 31 ITVRNLQDLALIYIRRTLRNFINDEMQAK-GIPQRAPPKRKRKRVKQR-----ITIYVCV 84
Query: 271 FASRISNPSDDNSCEDLEEERREEEEKTPPET-KPD-PPVNFLRQKVLSLPLPDPLKYYL 328
I P D E++EE+ +EEEEK E KP+ PP L +K++ LPLP+ LK YL
Sbjct: 85 CNQLILQPLDSEEDEEMEEDNKEEEEKDHSEAMKPEEPPQYLLTEKIMKLPLPESLKAYL 144
Query: 329 LYYREK 334
Y+R+K
Sbjct: 145 TYFRDK 150
>gi|226530908 protein-L-isoaspartate (D-aspartate)
O-methyltransferase 1 [Homo sapiens]
Length = 285
Score = 52.0 bits (123), Expect = 7e-07
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 6 SAGEDNDELIDNLKEAQYIRTELVEQAFRAIDRADYYLEEFKENAYKDLAWKHG-NIHLS 64
S G + ELI NL++ I+T+ V + A DR+ Y K N Y D G +S
Sbjct: 63 SGGASHSELIHNLRKNGIIKTDKVFEVMLATDRSHY----AKCNPYMDSPQSIGFQATIS 118
Query: 65 APCIYSEVMEAL--DLQPGLSFLNLGSGTGYLSS----MVGLILGPFGVNHGVELHSDVI 118
AP +++ +E L L G L++GSG+G L++ MVG G++H EL D +
Sbjct: 119 APHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSV 178
Query: 119 EYAKQKLDFFIRTSDSFDKFDFCEPSFVTGNCLEISPDCSQYDRVYCGAGVQKEHEEYMK 178
++ D V G+ + + YD ++ GA + +
Sbjct: 179 NNVRK---------DDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPVVPQALI- 228
Query: 179 NLLKVGGILVMPL 191
+ LK GG L++P+
Sbjct: 229 DQLKPGGRLILPV 241
>gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens]
Length = 224
Score = 37.7 bits (86), Expect = 0.014
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Query: 272 ASRISNPSDDNSCEDLEEERREEEEKTPPETKPD--PPVNFLRQKVLSLPLPDPL 324
+S +S P DD E+ EEE EEEE+ E + + PP + ++ L PDP+
Sbjct: 35 SSSVSGPDDDEEDEEEEEEEEEEEEEEEEEEEEEAPPPPRVVSEEHLRRYAPDPV 89
>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
sapiens]
Length = 2881
Score = 35.4 bits (80), Expect = 0.072
Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 18/111 (16%)
Query: 166 GAGVQKEHEEYMKNLLKVGGILVM-----PLEEKPCHSESGK-------SRLVQLPPVAV 213
GAGV++EH++ + + K GG+ + +++P E G +RL +L +
Sbjct: 2320 GAGVKEEHDQSTQ-MSKEGGLKLTFQKQGLAQKRPFDGEDGALGQQQYLTRLRELQSASE 2378
Query: 214 RSLQDLAR-IAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETI 263
SL + + I + GT Q T+ NG L N P K+RR RR+ +E +
Sbjct: 2379 TSLVNFPKSIPVSGTSI----QPTLGANGVILDNQPIVKKRRGRRKNVEGV 2425
>gi|166197690 neuronal guanine nucleotide exchange factor isoform 2
[Homo sapiens]
Length = 618
Score = 34.3 bits (77), Expect = 0.16
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 258 RRMETIVFLDKEVFASRISNPSDDNSCEDLEEERREEEEKTPPETKPDPPVNFL 311
+ +ET D E+ + +P+ +++ E+ EEE EEE +PPE K P + L
Sbjct: 97 QEIETRRQQDAEIEDNTNGSPASEDTPEEEEEEEEEEEPASPPERKTLPQICLL 150
>gi|166197688 neuronal guanine nucleotide exchange factor isoform 1
[Homo sapiens]
Length = 710
Score = 34.3 bits (77), Expect = 0.16
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 258 RRMETIVFLDKEVFASRISNPSDDNSCEDLEEERREEEEKTPPETKPDPPVNFL 311
+ +ET D E+ + +P+ +++ E+ EEE EEE +PPE K P + L
Sbjct: 189 QEIETRRQQDAEIEDNTNGSPASEDTPEEEEEEEEEEEPASPPERKTLPQICLL 242
>gi|187761324 shootin1 isoform a [Homo sapiens]
Length = 631
Score = 33.5 bits (75), Expect = 0.27
Identities = 26/127 (20%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 213 VRSLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETIVFLDKEVFA 272
+++L + A++ + ++I HQ+ V + L+N K ++++E ++ DK+
Sbjct: 263 LKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLHKEIHNLKQQLE-LLEEDKKELE 321
Query: 273 SRISNPSDD-----NSCEDLEEERREEEEKTPPETKPDPPVNFLRQKVLSLPLPDPLKYY 327
+ N + +S ++L++ + E PP P PP L P P+P++
Sbjct: 322 LKYQNSEEKARNLKHSVDELQKRVNQSENSVPPPPPPPPP--------LPPPPPNPIRSL 373
Query: 328 LLYYREK 334
+ R++
Sbjct: 374 MSMIRKR 380
>gi|50511340 shootin1 isoform b [Homo sapiens]
Length = 456
Score = 33.5 bits (75), Expect = 0.27
Identities = 26/127 (20%), Positives = 59/127 (46%), Gaps = 14/127 (11%)
Query: 213 VRSLQDLARIAIRGTIKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETIVFLDKEVFA 272
+++L + A++ + ++I HQ+ V + L+N K ++++E ++ DK+
Sbjct: 263 LKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLHKEIHNLKQQLE-LLEEDKKELE 321
Query: 273 SRISNPSDD-----NSCEDLEEERREEEEKTPPETKPDPPVNFLRQKVLSLPLPDPLKYY 327
+ N + +S ++L++ + E PP P PP L P P+P++
Sbjct: 322 LKYQNSEEKARNLKHSVDELQKRVNQSENSVPPPPPPPPP--------LPPPPPNPIRSL 373
Query: 328 LLYYREK 334
+ R++
Sbjct: 374 MSMIRKR 380
>gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens]
Length = 1049
Score = 32.3 bits (72), Expect = 0.61
Identities = 40/148 (27%), Positives = 58/148 (39%), Gaps = 21/148 (14%)
Query: 175 EYMKNLLKVGGILVMPLEEKPCHSESGKSRLV--QLPPVAVRSLQDLARIAIRGT----- 227
EY +N V L +++P K R V + PP + L + A+R
Sbjct: 252 EYFRNF--VDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRELDNLQY 309
Query: 228 --IKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETIVFLDKE-----VFASRISNPSD 280
+KKI+ QE + NG G + + R T+ L+ + S S S
Sbjct: 310 RKMKKILFQE--APNGPGAEAPEEEEEAEPYMHRAGTLTSLESSHSVPSMSISASSQSSS 367
Query: 281 DNSCEDL---EEERREEEEKTPPETKPD 305
NS D EEE EEEE+ E P+
Sbjct: 368 VNSLADASDNEEEEEEEEEEEEEEEGPE 395
>gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens]
Length = 1235
Score = 32.3 bits (72), Expect = 0.61
Identities = 40/148 (27%), Positives = 58/148 (39%), Gaps = 21/148 (14%)
Query: 175 EYMKNLLKVGGILVMPLEEKPCHSESGKSRLV--QLPPVAVRSLQDLARIAIRGT----- 227
EY +N V L +++P K R V + PP + L + A+R
Sbjct: 252 EYFRNF--VDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRELDNLQY 309
Query: 228 --IKKIIHQETVSKNGNGLKNTPRFKRRRVRRRRMETIVFLDKE-----VFASRISNPSD 280
+KKI+ QE + NG G + + R T+ L+ + S S S
Sbjct: 310 RKMKKILFQE--APNGPGAEAPEEEEEAEPYMHRAGTLTSLESSHSVPSMSISASSQSSS 367
Query: 281 DNSCEDL---EEERREEEEKTPPETKPD 305
NS D EEE EEEE+ E P+
Sbjct: 368 VNSLADASDNEEEEEEEEEEEEEEEGPE 395
>gi|123173772 tRNA(m1A58)-methyltransferase subunit TRM61 [Homo
sapiens]
Length = 289
Score = 32.0 bits (71), Expect = 0.79
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 76 LDLQPGLSFLNLGSGTGYLSSMVGLILGPFGVNHGVELHSDVIEYAKQK 124
L+L+PG G+G+G +S + + P G H VE H E A+++
Sbjct: 99 LELRPGSVVCESGTGSGSVSHAIIRTIAPTGHLHTVEFHQQRAEKAREE 147
>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform
b [Homo sapiens]
Length = 1524
Score = 32.0 bits (71), Expect = 0.79
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 225 RGTIKKIIHQETVSKNGNG--LKNTPRFKRRRVRRRRMETIVFLDKEVFASRISNPSDDN 282
R +KKI+ +E + K LK +R ++R + + + +L + S P +D
Sbjct: 349 REELKKIVEEERLKKKEEKERLKVEREKEREKLREEKRKYVEYL------KQWSKPREDM 402
Query: 283 SCEDLEEERREEEEKTPPETKPDPPV 308
C+DL +E E TP +T+ P +
Sbjct: 403 ECDDL----KELPEPTPVKTRLPPEI 424
>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform
a [Homo sapiens]
Length = 1556
Score = 32.0 bits (71), Expect = 0.79
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 12/86 (13%)
Query: 225 RGTIKKIIHQETVSKNGNG--LKNTPRFKRRRVRRRRMETIVFLDKEVFASRISNPSDDN 282
R +KKI+ +E + K LK +R ++R + + + +L + S P +D
Sbjct: 349 REELKKIVEEERLKKKEEKERLKVEREKEREKLREEKRKYVEYL------KQWSKPREDM 402
Query: 283 SCEDLEEERREEEEKTPPETKPDPPV 308
C+DL +E E TP +T+ P +
Sbjct: 403 ECDDL----KELPEPTPVKTRLPPEI 424
>gi|12056465 fibrillarin [Homo sapiens]
Length = 321
Score = 31.2 bits (69), Expect = 1.4
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 73 MEALDLQPGLSFLNLGSGTGYLSSMVGLILGPFGVNHGVELH----SDVIEYAKQK 124
++ + ++PG L LG+ +G S V I+GP G+ + VE D+I AK++
Sbjct: 152 VDQIHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR 207
>gi|61966703 NHS-like 2 [Homo sapiens]
Length = 709
Score = 31.2 bits (69), Expect = 1.4
Identities = 16/33 (48%), Positives = 17/33 (51%)
Query: 276 SNPSDDNSCEDLEEERREEEEKTPPETKPDPPV 308
S P DD + EE R EE T PE K PPV
Sbjct: 473 SEPEDDIESPEYAEEPRAEEVFTLPERKTKPPV 505
>gi|16507239 wingless-type MMTV integration site family, member 6
precursor [Homo sapiens]
Length = 365
Score = 30.8 bits (68), Expect = 1.8
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 7/53 (13%)
Query: 136 DKFDFCEPSFVTGN-------CLEISPDCSQYDRVYCGAGVQKEHEEYMKNLL 181
D DFC P+ TG+ C +PD S D + CG G ++E + +N L
Sbjct: 289 DSPDFCAPNRRTGSPGTRGRACNSSAPDLSGCDLLCCGRGHRQESVQLEENCL 341
>gi|83716024 kinesin family member 21B [Homo sapiens]
Length = 1624
Score = 30.8 bits (68), Expect = 1.8
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 13/58 (22%)
Query: 249 RFKRRRVRRRRMETIVFLDKEVFASRI------SNPSDDNSCEDLEEERRE---EEEK 297
R K++ VR+RR +KE F R S +D+N E+ EEER E EEE+
Sbjct: 550 RLKKKEVRQRRKSP----EKEAFKKRAKLQQENSEETDENEAEEEEEERDESGCEEEE 603
>gi|6912398 general transcription factor IIIC, polypeptide 3, 102kDa
[Homo sapiens]
Length = 886
Score = 30.8 bits (68), Expect = 1.8
Identities = 16/37 (43%), Positives = 19/37 (51%)
Query: 269 EVFASRISNPSDDNSCEDLEEERREEEEKTPPETKPD 305
+VFAS + DD E+ EEE EEEE T D
Sbjct: 84 KVFASMLGENEDDEEEEEEEEEEEEEEETPEQPTAGD 120
>gi|23346412 cysteine-serine-rich nuclear protein 3 [Homo sapiens]
Length = 585
Score = 29.6 bits (65), Expect = 3.9
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 267 DKEVFASRISNPSDDN-----SCEDLEEERREEEEKTPPETKPDPPVNFLRQKVLSLPLP 321
D F S +++ S + S E+ EEE EEEE+ + K D V L +PLP
Sbjct: 348 DGSSFCSGVTDSSTQSLAPSESDEEEEEEEEEEEEEDDDDDKGDGFVEGLGTHAEVVPLP 407
Query: 322 DPLKY 326
L Y
Sbjct: 408 SVLCY 412
>gi|110815815 centlein isoform 1 [Homo sapiens]
Length = 1406
Score = 29.6 bits (65), Expect = 3.9
Identities = 47/174 (27%), Positives = 77/174 (44%), Gaps = 15/174 (8%)
Query: 158 SQYDRVYCGAGVQKEHEEYMKNLLKVGGILVMPLEEKPCHSESGKSRLVQLPPVAVRSLQ 217
SQY+++Y QK EE K LK+ ++ E + +E + QL +A++S Q
Sbjct: 1207 SQYEQMY-----QKSKEELEKKDLKLTLLVSRISETESAMAEIETAASKQLQELALQSEQ 1261
Query: 218 DL--ARIAIRGTIKKIIHQETVSKN-GNGLKNTPRFKRRRVRR-RRMETIVFLDK----- 268
L A+ + +K+ T K L+N RR++R ++M+ K
Sbjct: 1262 VLEGAQKTLLLANEKVEEFTTFVKALAKELQNDVHVVRRQIRELKKMKKNRDACKTSTHK 1321
Query: 269 -EVFASRISNPSDDNSCEDLEEERREEEEKTPPETKPDPPVNFLRQKVLSLPLP 321
+ A+ I N S + E L+ E + E EKT + + D QK+L LP
Sbjct: 1322 AQTLAASILNISRSDLEEILDTEDQVEIEKTKIDAENDKEWMLYIQKLLEGQLP 1375
>gi|68077166 DnaJ homology subfamily A member 5 isoform 2 [Homo
sapiens]
Length = 531
Score = 29.6 bits (65), Expect = 3.9
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 239 KNGNGLKNTPRFKRRRVRRRRMETIVFLDKEVFASRI--SNPSDDNSCEDLEEERREEEE 296
K +KN + K+ R ++ + ++E F+ NP DDNS E++E+ +++
Sbjct: 324 KTEKAMKNHEKSKKHREMVALLKQQLEEEEENFSRPQIDENPLDDNSEEEMEDAPKQKLS 383
Query: 297 KTPPETKPDPPVNF 310
K + K P N+
Sbjct: 384 KKQKKKKQKPAQNY 397
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.137 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,059,929
Number of Sequences: 37866
Number of extensions: 689061
Number of successful extensions: 4208
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 4057
Number of HSP's gapped (non-prelim): 95
length of query: 334
length of database: 18,247,518
effective HSP length: 103
effective length of query: 231
effective length of database: 14,347,320
effective search space: 3314230920
effective search space used: 3314230920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.