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Search of human proteins with 157388941
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157388941 hypothetical protein LOC55071 [Homo sapiens]
(194 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157388941 hypothetical protein LOC55071 [Homo sapiens] 417 e-117
gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens] 43 1e-04
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 41 6e-04
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 41 6e-04
gi|38788260 bromodomain PHD finger transcription factor isoform ... 41 7e-04
gi|38788274 bromodomain PHD finger transcription factor isoform ... 41 7e-04
gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens] 40 0.001
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 40 0.001
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 40 0.001
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 40 0.001
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 40 0.001
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 40 0.001
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 39 0.003
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 39 0.003
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 39 0.003
gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Hom... 39 0.004
gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Hom... 39 0.004
gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens] 39 0.004
gi|239754674 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|222831660 family with sequence similarity 171, member A2 [Hom... 38 0.005
gi|239753324 PREDICTED: hypothetical protein [Homo sapiens] 38 0.005
gi|169163057 PREDICTED: hypothetical protein [Homo sapiens] 38 0.005
gi|47778921 alpha 1 type XIX collagen precursor [Homo sapiens] 38 0.005
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 38 0.005
gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens] 38 0.006
gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo ... 38 0.006
gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo ... 38 0.006
gi|110611908 mitogen-activated protein kinase kinase kinase kina... 38 0.006
gi|6005810 mitogen-activated protein kinase kinase kinase kinase... 38 0.006
gi|21687188 hypothetical protein LOC146325 [Homo sapiens] 37 0.008
>gi|157388941 hypothetical protein LOC55071 [Homo sapiens]
Length = 194
Score = 417 bits (1071), Expect = e-117
Identities = 194/194 (100%), Positives = 194/194 (100%)
Query: 1 MAKRRAAEPVTFHVPWKRLLLCDFAEQPPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDA 60
MAKRRAAEPVTFHVPWKRLLLCDFAEQPPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDA
Sbjct: 1 MAKRRAAEPVTFHVPWKRLLLCDFAEQPPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDA 60
Query: 61 GTMAEPSASPSKRRDSGDNSAPSGQEREDHGLETGDPPLPPPPVLPGPGEELPGARLPGG 120
GTMAEPSASPSKRRDSGDNSAPSGQEREDHGLETGDPPLPPPPVLPGPGEELPGARLPGG
Sbjct: 61 GTMAEPSASPSKRRDSGDNSAPSGQEREDHGLETGDPPLPPPPVLPGPGEELPGARLPGG 120
Query: 121 GGDDGAGRAGPPRGDWGVASRQHNEEFWQYNTFQYWRNPLPPIDLADIEDLSEDTLTEAT 180
GGDDGAGRAGPPRGDWGVASRQHNEEFWQYNTFQYWRNPLPPIDLADIEDLSEDTLTEAT
Sbjct: 121 GGDDGAGRAGPPRGDWGVASRQHNEEFWQYNTFQYWRNPLPPIDLADIEDLSEDTLTEAT 180
Query: 181 LQGRNEGAEVDMES 194
LQGRNEGAEVDMES
Sbjct: 181 LQGRNEGAEVDMES 194
>gi|239754955 PREDICTED: similar to COL22A1 protein [Homo sapiens]
Length = 1073
Score = 43.1 bits (100), Expect = 1e-04
Identities = 37/104 (35%), Positives = 43/104 (41%), Gaps = 13/104 (12%)
Query: 37 PPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSGQEREDHGLETGD 96
PPG A L G P + +R E S P R GD AP G + G+
Sbjct: 414 PPGSVGAPGLRGTPGKDGERGEKGAAGEEGSPGPVGPR--GDPGAPGLPGPPGKGKD-GE 470
Query: 97 PPLPPPPVLPGP--------GEELPGARLPGGGGDDGAGRAGPP 132
P L P LPGP +PG+ PG GD G G AGPP
Sbjct: 471 PGLRGSPGLPGPLGTKGDRGAPGIPGS--PGSRGDPGIGVAGPP 512
Score = 32.0 bits (71), Expect = 0.34
Identities = 28/88 (31%), Positives = 32/88 (36%), Gaps = 25/88 (28%)
Query: 70 PSKRRDSGDNSAPSGQEREDHGLETGDPPLPPPPVLPGP----GEE-------------- 111
P + D G P + E E G P LP PP + GP GE
Sbjct: 575 PGFKGDKGVPGKPGREGTEGKKGEAGPPGLPGPPGIAGPQGSQGERGADGEVGQKGDQGH 634
Query: 112 --LPGARLPGG-----GGDDGAGRAGPP 132
+PG P G G D AG AGPP
Sbjct: 635 PGVPGFMGPPGNPGPPGADGIAGAAGPP 662
Score = 29.6 bits (65), Expect = 1.7
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 11/75 (14%)
Query: 66 PSASPSKRRDSGDNSAPSGQ----EREDHGLETGDPPLPPPPVLPG-PGEELPGARLPGG 120
PS +P ++ G+N +P R G E G+ +P +PG PGE PG + G
Sbjct: 787 PSGTPGQKGSKGENGSPGLPGFLGPRGPPG-EPGEKGVPGKEGVPGKPGE--PGFK--GE 841
Query: 121 GGDDG-AGRAGPPRG 134
GD G G GPP G
Sbjct: 842 RGDPGIKGDKGPPGG 856
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 41.2 bits (95), Expect = 6e-04
Identities = 36/124 (29%), Positives = 42/124 (33%), Gaps = 27/124 (21%)
Query: 28 PPPP--PLWIRPPG-----VAHAGQLLGVPEQHRKRKID----------AGTMAEPSASP 70
PPPP P W P G V + P +H +R++ G P P
Sbjct: 119 PPPPALPTWSVPNGPSPEEVEQQKRQQPGPSEHIERRVSNAGGPPAPPAGGPPPPPGPPP 178
Query: 71 SKRRDSGDNSAPSGQEREDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDGAGRAG 130
PSG HG G PP PP LP A+ PGGGG G A
Sbjct: 179 PPGPPPPPGLPPSGVPAAAHGAGGGPPPAPP----------LPAAQGPGGGGAGAPGLAA 228
Query: 131 PPRG 134
G
Sbjct: 229 AIAG 232
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 41.2 bits (95), Expect = 6e-04
Identities = 34/102 (33%), Positives = 41/102 (40%), Gaps = 37/102 (36%)
Query: 28 PPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSGQER 87
PPPPP PP +A G P+ASP P+ +E
Sbjct: 799 PPPPPSGATPPPIAPTGP--------------------PTASPP---------VPAKEEP 829
Query: 88 EDHGLETGD--PPLPPPPVLPGPGEELPGARL-----PGGGG 122
E+ G PP PPPP +PGP LP +L PGGGG
Sbjct: 830 EELPAAPGPLPPPPPPPPPVPGP-VTLPPPQLVPEGTPGGGG 870
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 40.8 bits (94), Expect = 7e-04
Identities = 33/106 (31%), Positives = 41/106 (38%), Gaps = 17/106 (16%)
Query: 25 AEQPPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSG 84
A PPPPP PP + G + G+ +HR A+ +P R S+P G
Sbjct: 21 APAPPPPP----PPPTS--GPIGGLRSRHRGSSRGRWAAAQAEVAPKTRL-----SSPRG 69
Query: 85 QEREDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDGAGRAG 130
G + P PPPP P G R GGG G G G
Sbjct: 70 ------GSSSRRKPPPPPPAPPSTSAPGRGGRGGGGGRTGGGGGGG 109
Score = 27.7 bits (60), Expect = 6.4
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 88 EDHGLETGDPPLPPP--PVLPGPGEELPGARLPGG 120
+ G TG L P VLPGPG++L A +P G
Sbjct: 2296 QGQGQTTGQLQLIPQGVTVLPGPGQQLMQAAMPNG 2330
Score = 27.3 bits (59), Expect = 8.4
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Query: 28 PPPPPLWIRPPGVAHAGQL----LGVPEQHRKRKIDAGTMAEPSASPSKRR 74
P PPP PP V H G L L Q RKR+ + + S+S SK++
Sbjct: 2664 PAPPPSPPPPPAVQHTGLLSTPTLPAASQKRKREEE-----KDSSSKSKKK 2709
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 40.8 bits (94), Expect = 7e-04
Identities = 33/106 (31%), Positives = 41/106 (38%), Gaps = 17/106 (16%)
Query: 25 AEQPPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSG 84
A PPPPP PP + G + G+ +HR A+ +P R S+P G
Sbjct: 21 APAPPPPP----PPPTS--GPIGGLRSRHRGSSRGRWAAAQAEVAPKTRL-----SSPRG 69
Query: 85 QEREDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDGAGRAG 130
G + P PPPP P G R GGG G G G
Sbjct: 70 ------GSSSRRKPPPPPPAPPSTSAPGRGGRGGGGGRTGGGGGGG 109
Score = 27.7 bits (60), Expect = 6.4
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Query: 88 EDHGLETGDPPLPPP--PVLPGPGEELPGARLPGG 120
+ G TG L P VLPGPG++L A +P G
Sbjct: 2170 QGQGQTTGQLQLIPQGVTVLPGPGQQLMQAAMPNG 2204
Score = 27.3 bits (59), Expect = 8.4
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 9/51 (17%)
Query: 28 PPPPPLWIRPPGVAHAGQL----LGVPEQHRKRKIDAGTMAEPSASPSKRR 74
P PPP PP V H G L L Q RKR+ + + S+S SK++
Sbjct: 2681 PAPPPSPPPPPAVQHTGLLSTPTLPAASQKRKREEE-----KDSSSKSKKK 2726
>gi|4502961 alpha 1 type VII collagen precursor [Homo sapiens]
Length = 2944
Score = 40.4 bits (93), Expect = 0.001
Identities = 39/104 (37%), Positives = 47/104 (45%), Gaps = 15/104 (14%)
Query: 43 AGQLLGVPEQHRKRKIDAGTMAEPSAS-----PSKRRDSGDNSAPSGQEREDHGLETGDP 97
+G L VPE+ R K D+G P P +R GD P Q GL G+
Sbjct: 1967 SGSFLPVPERRRGPKGDSGEQGPPGKEGPIGFPGERGLKGDRGDPGPQ--GPPGLALGER 2024
Query: 98 PLPPPPVLPG-PGEE-LPGARLPGGGGDDGAGRAGPP--RGDWG 137
P P L G PG+ +PG LPG G G G AG P RG+ G
Sbjct: 2025 GPPGPSGLAGEPGKPGIPG--LPGRAG--GVGEAGRPGERGERG 2064
Score = 33.1 bits (74), Expect = 0.15
Identities = 40/114 (35%), Positives = 49/114 (42%), Gaps = 24/114 (21%)
Query: 29 PPPPLWIRP----PGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSG 84
PP P ++ PG+ A ++G P Q R G M +P PS R + P G
Sbjct: 2381 PPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPR----GEMGQPG--PSGERGL---AGPPG 2431
Query: 85 QEREDHGLETGDPPLPPPPVLPGPGEELPGAR-LPGGGGDDGAGRAGPPRGDWG 137
+E L PP PP V P PGA L G GD G G G PRG+ G
Sbjct: 2432 REGIPGPL---GPPGPPGSVGP------PGASGLKGDKGDPGVGLPG-PRGERG 2475
Score = 32.7 bits (73), Expect = 0.20
Identities = 30/102 (29%), Positives = 42/102 (41%), Gaps = 7/102 (6%)
Query: 38 PGVAHAGQLLGVPEQHRKRKIDAGTMAEPS--ASPSKRRDSGDNSAPSGQEREDHGLETG 95
PG + L G P + K ++ G EP ++ + GD+ A + R+ E G
Sbjct: 1820 PGPSGPPGLPGKPGEDGKPGLN-GKNGEPGDPGEDGRKGEKGDSGASGREGRDGPKGERG 1878
Query: 96 DPPLPPPPVLPGPGEELPGARLPGGGGDDGAGRAGPPRGDWG 137
P + P PG LPG P G G G P+GD G
Sbjct: 1879 APGILGPQGPPG----LPGPVGPPGQGFPGVPGGTGPKGDRG 1916
Score = 32.7 bits (73), Expect = 0.20
Identities = 33/107 (30%), Positives = 39/107 (36%), Gaps = 31/107 (28%)
Query: 66 PSASPSKRRDSGDNSAPSGQEREDHGLETGD---PPLPPPPVLPGP----GEE------- 111
P SP G+ P R+ + GD P +P P LPGP GE
Sbjct: 2240 PQGSPGLPGQVGETGKPGAPGRDGASGKDGDRGSPGVPGSPGLPGPVGPKGEPGPTGAPG 2299
Query: 112 -----LPGAR----LPGGGGDDGAGRAGP--------PRGDWGVASR 141
LPGA+ PGG D G G PRG+ G A R
Sbjct: 2300 QAVVGLPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAGR 2346
Score = 31.6 bits (70), Expect = 0.44
Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 59 DAGTMAEPSA-SPSKRRDSGDNSAPSGQEREDHGLETGDPPLPPPPVLPGPGEEL--PGA 115
D G P + + D GD + G+ G+P LP P PGP + PG
Sbjct: 1384 DPGPRGPPGLPGTAMKGDKGDRGERGPPGPGEGGIAPGEPGLPGLPGSPGPQGPVGPPGK 1443
Query: 116 RLPGGGGDDGA-GRAGPP 132
+ G +DGA G G P
Sbjct: 1444 KGEKGDSEDGAPGLPGQP 1461
Score = 31.6 bits (70), Expect = 0.44
Identities = 34/104 (32%), Positives = 42/104 (40%), Gaps = 15/104 (14%)
Query: 43 AGQLLGVPEQH--------RKRKIDAGTMAEPSASPSKRRDSGDNSAPSGQE-REDHGLE 93
AG L+G P R K +AG EP P + G AP + + D G+
Sbjct: 2319 AGDLVGEPGAKGDRGLPGPRGEKGEAGRAGEPG-DPG---EDGQKGAPGPKGFKGDPGV- 2373
Query: 94 TGDPPLPPPPVLPGPGEELPGARLPGGGGDDGAGRAGPPRGDWG 137
G P P PP PG +L LPG G G PRG+ G
Sbjct: 2374 -GVPGSPGPPGPPGVKGDLGLPGLPGAPGVVGFPGQTGPRGEMG 2416
Score = 30.8 bits (68), Expect = 0.76
Identities = 36/112 (32%), Positives = 47/112 (41%), Gaps = 23/112 (20%)
Query: 37 PPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSGQEREDHGLETGD 96
PPG+ L G P A + P+ + K D G + P + E G
Sbjct: 1774 PPGLDGRSGLDGKP--------GAAGPSGPNGAAGKAGDPGRDGLPGLRG------EQGL 1819
Query: 97 PPLPPPPVLPG-PGEE-LPGAR----LPGGGGDDGAGRAGPPRGDWGVASRQ 142
P PP LPG PGE+ PG PG G+D GR G +GD G + R+
Sbjct: 1820 PGPSGPPGLPGKPGEDGKPGLNGKNGEPGDPGED--GRKG-EKGDSGASGRE 1868
Score = 30.4 bits (67), Expect = 0.99
Identities = 42/149 (28%), Positives = 58/149 (38%), Gaps = 29/149 (19%)
Query: 9 PVTFHVPWKRLLLCDFAEQPP--PPPLWIRPPGVAHAGQLLGVPEQHRKRKID--AGTMA 64
P+ F P +R L D + P PP L + G L G P + + AG +
Sbjct: 1995 PIGF--PGERGLKGDRGDPGPQGPPGLALGERGPPGPSGLAGEPGKPGIPGLPGRAGGVG 2052
Query: 65 EPSASPSKRRDSGDNSAPSGQEREDHGLETGDPPLPPPPVLPGP---------------G 109
E + P +R + G+ Q R+ G P LP P PGP G
Sbjct: 2053 E-AGRPGERGERGEKGERGEQGRD------GPPGLPGTPGPPGPPGPKVSVDEPGPGLSG 2105
Query: 110 EELPGARLPGGGGDDGAGRAGPPRGDWGV 138
E+ P L G G+ G+ P+GD GV
Sbjct: 2106 EQGPPG-LKGAKGEPGSNGDQGPKGDRGV 2133
Score = 29.6 bits (65), Expect = 1.7
Identities = 36/113 (31%), Positives = 41/113 (36%), Gaps = 16/113 (14%)
Query: 26 EQPPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSGQ 85
E PP P PG A L G P G + E D + S S
Sbjct: 1642 EGPPGDP---GLPGKAGERGLRGAPGVR-------GPVGEKGDQGDPGEDGRNGSPGSSG 1691
Query: 86 EREDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDGAGRAGPPRGDWGV 138
+ D G E G P PP L G PGAR G GD G P+GD G+
Sbjct: 1692 PKGDRG-EPGPPG--PPGRLVDTG---PGAREKGEPGDRGQEGPRGPKGDPGL 1738
Score = 28.9 bits (63), Expect = 2.9
Identities = 30/75 (40%), Positives = 33/75 (44%), Gaps = 15/75 (20%)
Query: 82 PSGQEREDHGLETGDPPLPPPPVLPG-------PGEELP-GAR-LPGGGGDDG-AGRAGP 131
P G++ E E G P LP P PG PG P G R PG G+ G G GP
Sbjct: 1440 PPGKKGEKGDSEDGAPGLPGQPGSPGEQGPRGPPGAIGPKGDRGFPGPLGEAGEKGERGP 1499
Query: 132 P-----RGDWGVASR 141
P RG GVA R
Sbjct: 1500 PGPAGSRGLPGVAGR 1514
Score = 28.5 bits (62), Expect = 3.7
Identities = 26/99 (26%), Positives = 28/99 (28%), Gaps = 27/99 (27%)
Query: 66 PSASPSKRRDSGDNSAPSGQEREDHGLETGDPPLPPPPVLPG----------PGEELP-- 113
P P G+ P R G+P P P L G PGE P
Sbjct: 1285 PQGPPGSATAKGERGFPGADGRPGSPGRAGNPGTPGAPGLKGSPGLPGPRGDPGERGPRG 1344
Query: 114 ---------------GARLPGGGGDDGAGRAGPPRGDWG 137
G LPG GD G PRG G
Sbjct: 1345 PKGEPGAPGQVIGGEGPGLPGRKGDPGPSGPPGPRGPLG 1383
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 40.0 bits (92), Expect = 0.001
Identities = 32/89 (35%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 29 PPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTM--AEPSASPSKRRDSGD--NSAPSG 84
PPPP+ PP A A Q VP +I G + A P +P + S +AP
Sbjct: 348 PPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVC 407
Query: 85 QEREDHGLETGD----PPLPPPPVLPGPG 109
+ H L G+ PP PPPP LP PG
Sbjct: 408 ETVPVHPLPQGEVQGLPPPPPPPPLPPPG 436
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 40.0 bits (92), Expect = 0.001
Identities = 32/89 (35%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 29 PPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTM--AEPSASPSKRRDSGD--NSAPSG 84
PPPP+ PP A A Q VP +I G + A P +P + S +AP
Sbjct: 348 PPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVC 407
Query: 85 QEREDHGLETGD----PPLPPPPVLPGPG 109
+ H L G+ PP PPPP LP PG
Sbjct: 408 ETVPVHPLPQGEVQGLPPPPPPPPLPPPG 436
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 40.0 bits (92), Expect = 0.001
Identities = 32/89 (35%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 29 PPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTM--AEPSASPSKRRDSGD--NSAPSG 84
PPPP+ PP A A Q VP +I G + A P +P + S +AP
Sbjct: 348 PPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVC 407
Query: 85 QEREDHGLETGD----PPLPPPPVLPGPG 109
+ H L G+ PP PPPP LP PG
Sbjct: 408 ETVPVHPLPQGEVQGLPPPPPPPPLPPPG 436
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 40.0 bits (92), Expect = 0.001
Identities = 32/89 (35%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 29 PPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTM--AEPSASPSKRRDSGD--NSAPSG 84
PPPP+ PP A A Q VP +I G + A P +P + S +AP
Sbjct: 348 PPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVC 407
Query: 85 QEREDHGLETGD----PPLPPPPVLPGPG 109
+ H L G+ PP PPPP LP PG
Sbjct: 408 ETVPVHPLPQGEVQGLPPPPPPPPLPPPG 436
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 40.0 bits (92), Expect = 0.001
Identities = 37/122 (30%), Positives = 47/122 (38%), Gaps = 15/122 (12%)
Query: 25 AEQPPPPPLWIRPPGVAHAGQLLGV----PEQHRKRKIDAGTMAEPSASPSKRRDSGDNS 80
AE+P P W PP A Q L + P + + + A PS SP S
Sbjct: 760 AEEPLQDPNWPPPPPPAPEEQDLSMADFPPPEEAFFSVASPEPAGPSGSPELV------S 813
Query: 81 APSGQEREDHGLET---GDPPLPPPPVLPGPGEELPG--ARLPGGGGDDGAGRAGPPRGD 135
+P+ L+ G P PP P P P PG A+LP + GPPR D
Sbjct: 814 SPAASSSSATALQIQPPGSPDPPPAPPAPAPASSAPGHVAKLPQKEPVGCSKGGGPPRED 873
Query: 136 WG 137
G
Sbjct: 874 VG 875
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 38.9 bits (89), Expect = 0.003
Identities = 36/106 (33%), Positives = 47/106 (44%), Gaps = 29/106 (27%)
Query: 28 PPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSGQER 87
PPPPP +L +Q R+ +AG A +A+ + G+ A +GQE
Sbjct: 17 PPPPP-----------SELKKAEQQQRE---EAGGEAAAAAAAER----GEMKAAAGQES 58
Query: 88 EDHGLETGDPPLPPPPVLPGPGEELP-GARLPGGGGDDGAGRAGPP 132
E P + PP L G+EL GA GGGG GAG G P
Sbjct: 59 EG-------PAVGPPQPL---GKELQDGAESNGGGGGGGAGSGGGP 94
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 38.9 bits (89), Expect = 0.003
Identities = 36/106 (33%), Positives = 47/106 (44%), Gaps = 29/106 (27%)
Query: 28 PPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSGQER 87
PPPPP +L +Q R+ +AG A +A+ + G+ A +GQE
Sbjct: 17 PPPPP-----------SELKKAEQQQRE---EAGGEAAAAAAAER----GEMKAAAGQES 58
Query: 88 EDHGLETGDPPLPPPPVLPGPGEELP-GARLPGGGGDDGAGRAGPP 132
E P + PP L G+EL GA GGGG GAG G P
Sbjct: 59 EG-------PAVGPPQPL---GKELQDGAESNGGGGGGGAGSGGGP 94
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 38.9 bits (89), Expect = 0.003
Identities = 29/108 (26%), Positives = 38/108 (35%), Gaps = 11/108 (10%)
Query: 28 PPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSGQER 87
PPPPP G+ G P Q R +P P + S +P G+ +
Sbjct: 111 PPPPP-----------GKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQ 159
Query: 88 EDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDGAGRAGPPRGD 135
P PPPP G G + P G G + PP+GD
Sbjct: 160 GPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGD 207
Score = 37.0 bits (84), Expect = 0.011
Identities = 28/108 (25%), Positives = 37/108 (34%), Gaps = 11/108 (10%)
Query: 28 PPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSGQER 87
PPPPP G+ G P Q + +P P + S +P G+ +
Sbjct: 50 PPPPP-----------GKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQ 98
Query: 88 EDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDGAGRAGPPRGD 135
P PPPP G G P G G + PP+GD
Sbjct: 99 GPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGD 146
Score = 35.0 bits (79), Expect = 0.040
Identities = 27/107 (25%), Positives = 37/107 (34%), Gaps = 11/107 (10%)
Query: 28 PPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSGQER 87
PPPPP G+ G P Q K+ +P P + S + +P G+ +
Sbjct: 172 PPPPP-----------GKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQ 220
Query: 88 EDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDGAGRAGPPRG 134
P PPPP G G P G G + P +G
Sbjct: 221 GPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPAQG 267
Score = 34.3 bits (77), Expect = 0.068
Identities = 32/117 (27%), Positives = 44/117 (37%), Gaps = 11/117 (9%)
Query: 27 QPPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSGQE 86
Q PPP +P G G+ G P Q K + +P P + + P +
Sbjct: 180 QGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGK 239
Query: 87 REDHGLETGDPPL-PPPPVLP-GP----GEELPGARLP-----GGGGDDGAGRAGPP 132
+ + G+ P PPPP P GP G + AR P G +G GPP
Sbjct: 240 PQGPPPQGGNKPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPP 296
Score = 33.5 bits (75), Expect = 0.12
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 13/119 (10%)
Query: 27 QPPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSGQE 86
Q PPP +P G G+ G P Q K + +P P + + P +
Sbjct: 58 QGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGK 117
Query: 87 REDHGLETGDPPL-PPPPVLP-GP---GEELPGARLPGG--------GGDDGAGRAGPP 132
+ + G+ P PPPP P GP G++ R P G GG+ G PP
Sbjct: 118 PQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPP 176
Score = 27.7 bits (60), Expect = 6.4
Identities = 17/54 (31%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Query: 82 PSGQEREDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDGAGRAGPPRGD 135
P G + G PP P P P P G P G G + PP+GD
Sbjct: 36 PQGPSPQGGNKPQGPPPPPGKPQGPPP----QGGNKPQGPPPPGKPQGPPPQGD 85
>gi|111118976 collagen, type II, alpha 1 isoform 1 precursor [Homo
sapiens]
Length = 1487
Score = 38.5 bits (88), Expect = 0.004
Identities = 37/114 (32%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 28 PPPPPLWIRPPGVA--HAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSGQ 85
PP PP PPG+ A Q+ G ++ + G M P R G AP Q
Sbjct: 163 PPGPPGPPGPPGLGGNFAAQMAGGFDE-KAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQ 221
Query: 86 EREDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDG-------AGRAGPP 132
+ + E G+P + P GP PG PG GDDG AG GPP
Sbjct: 222 GFQGNPGEPGEPGVSGPMGPRGP----PGP--PGKPGDDGEAGKPGKAGERGPP 269
Score = 36.6 bits (83), Expect = 0.014
Identities = 37/116 (31%), Positives = 44/116 (37%), Gaps = 29/116 (25%)
Query: 35 IRPPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSGQEREDHGLET 94
I PPG A G P Q +A P +P +R SG + P G
Sbjct: 503 IGPPGERGAPGNRGFPGQDG--------LAGPKGAPGERGPSG-LAGPKGAN-------- 545
Query: 95 GDPPLPPPPVLPG-------PGEELPGARLPGGGGDDGAGRAGPP-----RGDWGV 138
GDP P P LPG PG+ P ++ G GR GPP RG GV
Sbjct: 546 GDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGV 601
Score = 34.3 bits (77), Expect = 0.068
Identities = 32/113 (28%), Positives = 42/113 (37%), Gaps = 20/113 (17%)
Query: 25 AEQPPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSG 84
AE PP P G+A ++G+P Q +R + PS P K+ G +
Sbjct: 967 AEGPPGPQ------GLAGQRGIVGLPGQRGERGFPG--LPGPSGEPGKQGAPGASG---- 1014
Query: 85 QEREDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDGAGRAGPPRGDWG 137
+ G P PP L GP E PG G G A +GD G
Sbjct: 1015 --------DRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRG 1059
Score = 33.5 bits (75), Expect = 0.12
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
Query: 73 RRDSGDNSAPSGQEREDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDGAGRAG 130
R D G+ AP + R+ G+P P PP PGP PG GG+ A AG
Sbjct: 137 RGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGP---------PGLGGNFAAQMAG 185
Score = 31.2 bits (69), Expect = 0.58
Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 12/78 (15%)
Query: 66 PSASPSKRRDSGDNSAPSGQEREDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDG 125
P P +R +G A + + G PP PV P G PGA PG G+ G
Sbjct: 325 PRGLPGERGRTGPAGAAGARGNDGQPGPAG----PPGPVGPAGGPGFPGA--PGAKGEAG 378
Query: 126 -AGRAGP-----PRGDWG 137
G GP PRG+ G
Sbjct: 379 PTGARGPEGAQGPRGEPG 396
Score = 31.2 bits (69), Expect = 0.58
Identities = 28/78 (35%), Positives = 34/78 (43%), Gaps = 12/78 (15%)
Query: 66 PSASPSKRRDSGDNSAPSGQERED--HGL--ETGDPPLPPP------PVLPGPGEELPGA 115
P+ P ++ + GD+ PSG E GL + G LP P LPGP E
Sbjct: 949 PAGPPGEKGEPGDDG-PSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQ 1007
Query: 116 RLPGGGGDDG-AGRAGPP 132
PG GD G G GPP
Sbjct: 1008 GAPGASGDRGPPGPVGPP 1025
Score = 30.8 bits (68), Expect = 0.76
Identities = 41/127 (32%), Positives = 51/127 (40%), Gaps = 24/127 (18%)
Query: 28 PPPPPLWIRPPGVAHAGQLLGVPEQHRK-RKIDAGTMAE--PSASPSKRRDSGDNSAPSG 84
PP P + PPG GQ EQ +K DAG PS +P + +G
Sbjct: 829 PPGPAGFAGPPGAD--GQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGA 886
Query: 85 QEREDHGLETGDPPL------------PPPPVLPGP-GEELP-GAR----LPGGGGDDG- 125
+ + TG P P PP PGP G++ P GAR PG G+ G
Sbjct: 887 RGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGL 946
Query: 126 AGRAGPP 132
G AGPP
Sbjct: 947 QGPAGPP 953
Score = 28.1 bits (61), Expect = 4.9
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 77 GDNSAPSGQEREDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDG-AGRAGPP 132
G+ AP + E G P P LPG A G G+DG G AGPP
Sbjct: 300 GEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPP 356
Score = 27.7 bits (60), Expect = 6.4
Identities = 35/96 (36%), Positives = 38/96 (39%), Gaps = 20/96 (20%)
Query: 61 GTMAEPSASPSKRRDSGDNSAPSGQEREDHGLETGD---PPLPPPPVLPGP--------- 108
G EP S D + + D G ETG P P PP PGP
Sbjct: 1029 GPAGEPGREGSPGADGPPGRDGAAGVKGDRG-ETGAVGAPGAPGPPGSPGPAGPTGKQGD 1087
Query: 109 -GEELPGARLP-GGGGDDGA-GRAGP--PRGDWGVA 139
GE GA+ P G G GA G GP PRGD G A
Sbjct: 1088 RGE--AGAQGPMGPSGPAGARGIQGPQGPRGDKGEA 1121
>gi|111118974 collagen, type II, alpha 1 isoform 2 precursor [Homo
sapiens]
Length = 1418
Score = 38.5 bits (88), Expect = 0.004
Identities = 37/114 (32%), Positives = 46/114 (40%), Gaps = 16/114 (14%)
Query: 28 PPPPPLWIRPPGVA--HAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSGQ 85
PP PP PPG+ A Q+ G ++ + G M P R G AP Q
Sbjct: 94 PPGPPGPPGPPGLGGNFAAQMAGGFDE-KAGGAQLGVMQGPMGPMGPRGPPGPAGAPGPQ 152
Query: 86 EREDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDG-------AGRAGPP 132
+ + E G+P + P GP PG PG GDDG AG GPP
Sbjct: 153 GFQGNPGEPGEPGVSGPMGPRGP----PGP--PGKPGDDGEAGKPGKAGERGPP 200
Score = 36.6 bits (83), Expect = 0.014
Identities = 37/116 (31%), Positives = 44/116 (37%), Gaps = 29/116 (25%)
Query: 35 IRPPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSGQEREDHGLET 94
I PPG A G P Q +A P +P +R SG + P G
Sbjct: 434 IGPPGERGAPGNRGFPGQDG--------LAGPKGAPGERGPSG-LAGPKGAN-------- 476
Query: 95 GDPPLPPPPVLPG-------PGEELPGARLPGGGGDDGAGRAGPP-----RGDWGV 138
GDP P P LPG PG+ P ++ G GR GPP RG GV
Sbjct: 477 GDPGRPGEPGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGV 532
Score = 34.3 bits (77), Expect = 0.068
Identities = 32/113 (28%), Positives = 42/113 (37%), Gaps = 20/113 (17%)
Query: 25 AEQPPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSG 84
AE PP P G+A ++G+P Q +R + PS P K+ G +
Sbjct: 898 AEGPPGPQ------GLAGQRGIVGLPGQRGERGFPG--LPGPSGEPGKQGAPGASG---- 945
Query: 85 QEREDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDGAGRAGPPRGDWG 137
+ G P PP L GP E PG G G A +GD G
Sbjct: 946 --------DRGPPGPVGPPGLTGPAGEPGREGSPGADGPPGRDGAAGVKGDRG 990
Score = 33.5 bits (75), Expect = 0.12
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
Query: 73 RRDSGDNSAPSGQEREDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDGAGRAG 130
R D G+ AP + R+ G+P P PP PGP PG GG+ A AG
Sbjct: 68 RGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGP---------PGLGGNFAAQMAG 116
Score = 31.2 bits (69), Expect = 0.58
Identities = 26/78 (33%), Positives = 32/78 (41%), Gaps = 12/78 (15%)
Query: 66 PSASPSKRRDSGDNSAPSGQEREDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDG 125
P P +R +G A + + G PP PV P G PGA PG G+ G
Sbjct: 256 PRGLPGERGRTGPAGAAGARGNDGQPGPAG----PPGPVGPAGGPGFPGA--PGAKGEAG 309
Query: 126 -AGRAGP-----PRGDWG 137
G GP PRG+ G
Sbjct: 310 PTGARGPEGAQGPRGEPG 327
Score = 31.2 bits (69), Expect = 0.58
Identities = 28/78 (35%), Positives = 34/78 (43%), Gaps = 12/78 (15%)
Query: 66 PSASPSKRRDSGDNSAPSGQERED--HGL--ETGDPPLPPP------PVLPGPGEELPGA 115
P+ P ++ + GD+ PSG E GL + G LP P LPGP E
Sbjct: 880 PAGPPGEKGEPGDDG-PSGAEGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQ 938
Query: 116 RLPGGGGDDG-AGRAGPP 132
PG GD G G GPP
Sbjct: 939 GAPGASGDRGPPGPVGPP 956
Score = 30.8 bits (68), Expect = 0.76
Identities = 41/127 (32%), Positives = 51/127 (40%), Gaps = 24/127 (18%)
Query: 28 PPPPPLWIRPPGVAHAGQLLGVPEQHRK-RKIDAGTMAE--PSASPSKRRDSGDNSAPSG 84
PP P + PPG GQ EQ +K DAG PS +P + +G
Sbjct: 760 PPGPAGFAGPPGAD--GQPGAKGEQGEAGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGA 817
Query: 85 QEREDHGLETGDPPL------------PPPPVLPGP-GEELP-GAR----LPGGGGDDG- 125
+ + TG P P PP PGP G++ P GAR PG G+ G
Sbjct: 818 RGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPPGPSGKDGPKGARGDSGPPGRAGEPGL 877
Query: 126 AGRAGPP 132
G AGPP
Sbjct: 878 QGPAGPP 884
Score = 28.1 bits (61), Expect = 4.9
Identities = 20/57 (35%), Positives = 23/57 (40%), Gaps = 1/57 (1%)
Query: 77 GDNSAPSGQEREDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDG-AGRAGPP 132
G+ AP + E G P P LPG A G G+DG G AGPP
Sbjct: 231 GEAGAPGVKGESGSPGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPP 287
Score = 27.7 bits (60), Expect = 6.4
Identities = 35/96 (36%), Positives = 38/96 (39%), Gaps = 20/96 (20%)
Query: 61 GTMAEPSASPSKRRDSGDNSAPSGQEREDHGLETGD---PPLPPPPVLPGP--------- 108
G EP S D + + D G ETG P P PP PGP
Sbjct: 960 GPAGEPGREGSPGADGPPGRDGAAGVKGDRG-ETGAVGAPGAPGPPGSPGPAGPTGKQGD 1018
Query: 109 -GEELPGARLP-GGGGDDGA-GRAGP--PRGDWGVA 139
GE GA+ P G G GA G GP PRGD G A
Sbjct: 1019 RGE--AGAQGPMGPSGPAGARGIQGPQGPRGDKGEA 1052
>gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens]
Length = 2382
Score = 38.5 bits (88), Expect = 0.004
Identities = 32/120 (26%), Positives = 48/120 (40%), Gaps = 4/120 (3%)
Query: 6 AAEPVTFHVPWKRLLLCDF---AEQPPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGT 62
A T H ++R ++CD A + P PL + P + A PE HR+ + A
Sbjct: 70 ATTTTTEHRFFRRSVICDSNATALELPGLPLSLPQPSIPAAVPQSAPPEPHREETVTATA 129
Query: 63 MAEPSASPSKRRDSGDNSAPSGQEREDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGG 122
++ + P G+ + + D P+ P L G EE P AR GGG
Sbjct: 130 TSQVAQQPPAAAAPGEQAVAGPAPSTVPSSTSKDRPVSQPS-LVGSKEEPPPARSGSGGG 188
>gi|239754674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 38.5 bits (88), Expect = 0.004
Identities = 41/138 (29%), Positives = 54/138 (39%), Gaps = 26/138 (18%)
Query: 27 QPPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTMAE---PSASPSKRRDSGDNSAPS 83
Q PP L +P G G P+ + A P+A P++ R+ G S
Sbjct: 171 QRPPVYLGNKPTPPRQEGSFGGRPKSQPPLPQETAAPAPQPGPTAPPARVREPGRAEGAS 230
Query: 84 GQEREDHGLETGDPPLPPPPVL-----------PGPG----EELPGARLPGGGG--DDGA 126
+ R PP P P L PGPG E+ R PGGGG + GA
Sbjct: 231 REPRL-RSRAARPPPAPGPGALSRASRSRAAGRPGPGFHGGEKAAAPRAPGGGGGRNPGA 289
Query: 127 -GRAGPP----RGDWGVA 139
GRA PP + WG++
Sbjct: 290 LGRAAPPSRARQDAWGLS 307
>gi|222831660 family with sequence similarity 171, member A2 [Homo
sapiens]
Length = 826
Score = 38.1 bits (87), Expect = 0.005
Identities = 35/116 (30%), Positives = 40/116 (34%), Gaps = 27/116 (23%)
Query: 36 RPPGVAHAGQLLGVPE-QHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSGQEREDHGLET 94
RPP + AGQL+ H K + M R G+ A
Sbjct: 509 RPPSLGQAGQLIFCGSIDHLKDNVYRNVMPTLVIPAHYVRLGGEAGAAG----------V 558
Query: 95 GDPPLPPPPVLPG---------------PGEELPGARLPGGGGDD-GAGRAGPPRG 134
GD P PP PG PG PG GGGG+ GAGRA P G
Sbjct: 559 GDEPAPPEGTAPGPARAFPQPDPQRPQMPGHSGPGGEGGGGGGEGWGAGRAAPVSG 614
>gi|239753324 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 38.1 bits (87), Expect = 0.005
Identities = 42/139 (30%), Positives = 54/139 (38%), Gaps = 35/139 (25%)
Query: 14 VPWKRLLLCDFAEQPP----------PPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTM 63
VPW+R++L +F QP P + PPG + + H +R D
Sbjct: 14 VPWRRMVL-NFVFQPSARAGAGAGRSPAARQVAPPGGPSS-----LARTHSRRHPDH--- 64
Query: 64 AEPSASPSKRRDSGDNSAPSGQEREDHGLETGDPPLPPPPVLPGPGEELPGAR---LPGG 120
A P PS R S+ L T +P P PGPG + + LPGG
Sbjct: 65 APPPGRPSCSRPLCAGSSC---------LATPEPARSPSIAEPGPGIPVAAIKPVILPGG 115
Query: 121 GGDDGAGRAGPP----RGD 135
GG GA PP RGD
Sbjct: 116 GGCTGARTENPPLSPTRGD 134
>gi|169163057 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 38.1 bits (87), Expect = 0.005
Identities = 42/139 (30%), Positives = 54/139 (38%), Gaps = 35/139 (25%)
Query: 14 VPWKRLLLCDFAEQPP----------PPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTM 63
VPW+R++L +F QP P + PPG + + H +R D
Sbjct: 14 VPWRRMVL-NFVFQPSARAGAGAGRSPAARQVAPPGGPSS-----LARTHSRRHPDH--- 64
Query: 64 AEPSASPSKRRDSGDNSAPSGQEREDHGLETGDPPLPPPPVLPGPGEELPGAR---LPGG 120
A P PS R S+ L T +P P PGPG + + LPGG
Sbjct: 65 APPPGRPSCSRPLCAGSSC---------LATPEPARAPSIAEPGPGIPVAAIKPVILPGG 115
Query: 121 GGDDGAGRAGPP----RGD 135
GG GA PP RGD
Sbjct: 116 GGCTGARTENPPLSPTRGD 134
>gi|47778921 alpha 1 type XIX collagen precursor [Homo sapiens]
Length = 1142
Score = 38.1 bits (87), Expect = 0.005
Identities = 37/104 (35%), Positives = 46/104 (44%), Gaps = 14/104 (13%)
Query: 37 PPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSGQEREDHGLETGD 96
PPG+ + L G ++ AG+M P P G++ P Q + E GD
Sbjct: 514 PPGLIGSPGLKG-------QQGSAGSMG-PRGPPGDVGLPGEHGIPGKQGIKG---EKGD 562
Query: 97 PP-LPPPPVLPGPGEEL--PGARLPGGGGDDGAGRAGPPRGDWG 137
P + PP LPGP E PG LPG G DG A PRG G
Sbjct: 563 PGGIIGPPGLPGPKGEAGPPGKSLPGEPGLDGNPGAPGPRGPKG 606
Score = 28.9 bits (63), Expect = 2.9
Identities = 40/141 (28%), Positives = 54/141 (38%), Gaps = 41/141 (29%)
Query: 29 PPPPLWIRPPGV----AHAGQL--------LGVPEQH--------RKRKIDAGTMAEPSA 68
P PP I PG+ AG + +G+P +H + K D G + P
Sbjct: 512 PGPPGLIGSPGLKGQQGSAGSMGPRGPPGDVGLPGEHGIPGKQGIKGEKGDPGGIIGPPG 571
Query: 69 SPSKRRDSGDNSAPSGQEREDHGLETGDPPLPPPPVLPGP----GEE-LPGAR-LPGGGG 122
P + ++G P G+ G+P L P PGP GE LPG PG G
Sbjct: 572 LPGPKGEAG----PPGKSLP------GEPGLDGNPGAPGPRGPKGERGLPGVHGSPGDIG 621
Query: 123 DDGAGRAG-----PPRGDWGV 138
G G G P G+ G+
Sbjct: 622 PQGIGIPGRTGAQGPAGEPGI 642
Score = 27.3 bits (59), Expect = 8.4
Identities = 19/45 (42%), Positives = 21/45 (46%), Gaps = 9/45 (20%)
Query: 93 ETGDPPLPPPPVLPG----PGEELPGARLPGGGGDDG-AGRAGPP 132
E GD P PP LPG G + P PG G G G+ GPP
Sbjct: 377 EKGDTGPPGPPALPGSLGIQGPQGP----PGKEGQRGRRGKTGPP 417
Score = 27.3 bits (59), Expect = 8.4
Identities = 24/77 (31%), Positives = 29/77 (37%), Gaps = 5/77 (6%)
Query: 66 PSASPSKRRDSGDNSAPSGQEREDHGLETGDPPLPPPPVLPG-PGEELPGARLPGGGGDD 124
P A P G P + + +TG P P PP PG PG + L G D
Sbjct: 386 PPALPGSLGIQGPQGPPGKEGQRGRRGKTGPPGKPGPPGPPGPPGIQGIHQTLGGYYNKD 445
Query: 125 GAG----RAGPPRGDWG 137
G AG +GD G
Sbjct: 446 NKGNDEHEAGGLKGDKG 462
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 38.1 bits (87), Expect = 0.005
Identities = 35/122 (28%), Positives = 46/122 (37%), Gaps = 23/122 (18%)
Query: 28 PPPPPLWIRPPGVAHAGQLLGV---------PEQHRKRKIDAGTMAEP----SASPSKRR 74
PPPPP + A A + P Q R A +A P +A P+
Sbjct: 133 PPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAP 192
Query: 75 DSGDNSAPSGQEREDHGLETGDPPLPPPPVLPGPGEEL----PGARLPGGGGDDGAGRAG 130
+G AP + +PPLPPPP P P ++ P + P GG AG A
Sbjct: 193 PAGPRRAPPP------AVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAVRAGGAA 246
Query: 131 PP 132
P
Sbjct: 247 RP 248
>gi|110349772 alpha 1 type I collagen preproprotein [Homo sapiens]
Length = 1464
Score = 37.7 bits (86), Expect = 0.006
Identities = 38/121 (31%), Positives = 47/121 (38%), Gaps = 27/121 (22%)
Query: 25 AEQPPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSG 84
A+ P P P G+A ++G+P Q +R + PS P K+ SG +
Sbjct: 939 ADGPAGAPGTPGPQGIAGQRGVVGLPGQRGERGFPG--LPGPSGEPGKQGPSGASG---- 992
Query: 85 QEREDHGLETGDPPLPPPPVLPGP-----GEELPGAR-------LPGGGGDDG-AGRAGP 131
E G P PP L GP E PGA PG GD G G AGP
Sbjct: 993 --------ERGPPGPMGPPGLAGPPGESGREGAPGAEGSPGRDGSPGAKGDRGETGPAGP 1044
Query: 132 P 132
P
Sbjct: 1045 P 1045
Score = 33.5 bits (75), Expect = 0.12
Identities = 41/149 (27%), Positives = 51/149 (34%), Gaps = 31/149 (20%)
Query: 26 EQPPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSASPSKRRDSGDNSAPSGQ 85
E+ PP P+ PPG+A G P + +G P A S RD +P +
Sbjct: 993 ERGPPGPMG--PPGLA------GPPGE-------SGREGAPGAEGSPGRDG----SPGAK 1033
Query: 86 EREDHGLETGDPPLPPPPVLPGP----------GEELPGARLPGGGGDDGAGRAGP--PR 133
G P P P PGP GE P G G AGP PR
Sbjct: 1034 GDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPVGPVGARGPAGPQGPR 1093
Query: 134 GDWGVASRQHNEEFWQYNTFQYWRNPLPP 162
GD G Q + + F + P P
Sbjct: 1094 GDKGETGEQGDRGIKGHRGFSGLQGPPGP 1122
Score = 28.5 bits (62), Expect = 3.7
Identities = 26/90 (28%), Positives = 33/90 (36%), Gaps = 21/90 (23%)
Query: 66 PSASPSKRRDSGDNSAP-----SGQEREDHGLETGDPPLPP-------------PPVLPG 107
P P + +SG+ AP +G + E + PP P P LPG
Sbjct: 423 PGGPPGPKGNSGEPGAPGSKGDTGAKGEPGPVGVQGPPGPAGEEGKRGARGEPGPTGLPG 482
Query: 108 PGEELPGARLPGGGGDDGAGRAGPPRGDWG 137
P E G PG G GA P+G G
Sbjct: 483 PPGERGG---PGSRGFPGADGVAGPKGPAG 509
Score = 28.1 bits (61), Expect = 4.9
Identities = 33/110 (30%), Positives = 35/110 (31%), Gaps = 5/110 (4%)
Query: 28 PPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTMAEPSAS--PSKRRDSGDNSAPSGQ 85
P PP PG LG P R + G E P G N AP
Sbjct: 648 PAGPPGEAGKPGEQGVPGDLGAPGPSGARG-ERGFPGERGVQGPPGPAGPRGANGAPGND 706
Query: 86 EREDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDGAGRAGPPRGD 135
+ G P P L G E A LPG GD G AGP D
Sbjct: 707 GAKGDAGAPGAPGSQGAPGLQGMPGERGAAGLPGPKGD--RGDAGPKGAD 754
Score = 27.3 bits (59), Expect = 8.4
Identities = 34/116 (29%), Positives = 41/116 (35%), Gaps = 6/116 (5%)
Query: 28 PPPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTM--AEPSASPSKRRDSGDNSAPSGQ 85
PP P + PPG G P K DAG A P+ P + G A +
Sbjct: 807 PPGPAGFAGPPGADGQPGAKGEPGD-AGAKGDAGPPGPAGPAGPPGPIGNVGAPGAKGAR 865
Query: 86 EREDHGLETGDPPLPPPPVLPGPGEELPGARLPGGGGDDGAGRAGPPRGDWGVASR 141
TG P PGP PG G +G G+ PRG+ G A R
Sbjct: 866 GSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEG-GKG--PRGETGPAGR 918
>gi|239750966 PREDICTED: hypothetical protein XP_002347633 [Homo
sapiens]
Length = 261
Score = 37.7 bits (86), Expect = 0.006
Identities = 40/121 (33%), Positives = 49/121 (40%), Gaps = 16/121 (13%)
Query: 15 PWKRLLLCDFAE-QPPPPPLWIRPPGVAHAGQLLGVPEQHRK-RKIDAGTMAEPSASPSK 72
PW+ L C +P P PL + + Q L P R+ R+ AG A P+
Sbjct: 147 PWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAPPTG 206
Query: 73 RRDSGDN-SAPSGQEREDHGLETGDPPLPPPPVLPGPGEEL----PGARLPGGGGDDGAG 127
+G S+PS T PP P P PGP E P AR PG G GAG
Sbjct: 207 SMRAGPGPSSPSAAP-------TSHPP--PSPACPGPEMETILRNPPARSPGAGWGSGAG 257
Query: 128 R 128
R
Sbjct: 258 R 258
>gi|239745372 PREDICTED: hypothetical protein XP_002343483 [Homo
sapiens]
Length = 261
Score = 37.7 bits (86), Expect = 0.006
Identities = 40/121 (33%), Positives = 49/121 (40%), Gaps = 16/121 (13%)
Query: 15 PWKRLLLCDFAE-QPPPPPLWIRPPGVAHAGQLLGVPEQHRK-RKIDAGTMAEPSASPSK 72
PW+ L C +P P PL + + Q L P R+ R+ AG A P+
Sbjct: 147 PWRLLSACPSGRPRPRPLPLPLMLMLMLPTLQPLPPPGSARRPRRGRAGRGGAAPAPPTG 206
Query: 73 RRDSGDN-SAPSGQEREDHGLETGDPPLPPPPVLPGPGEEL----PGARLPGGGGDDGAG 127
+G S+PS T PP P P PGP E P AR PG G GAG
Sbjct: 207 SMRAGPGPSSPSAAP-------TSHPP--PSPACPGPEMETILRNPPARSPGAGWGSGAG 257
Query: 128 R 128
R
Sbjct: 258 R 258
>gi|110611908 mitogen-activated protein kinase kinase kinase kinase
1 isoform 1 [Homo sapiens]
Length = 821
Score = 37.7 bits (86), Expect = 0.006
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 23/118 (19%)
Query: 26 EQPPPPPLWIRPPGVAHAGQLLGVPE-----QHRKRKIDAGTMAEPSASPSKRRDSGD-- 78
E+P PP R H LG+P+ +H + + G P A+ ++ + D
Sbjct: 306 EEPELPPAIPRRIRSTHRSSSLGIPDADCCRRHMEFRKLRGMETRPPANTARLQPPRDLR 365
Query: 79 NSAPSGQEREDHGLETGD-----------PPLPPPPVLPGPGEELPGARLPGGGGDDG 125
+S+P Q E + D PPLPP P P +E PG+ GDDG
Sbjct: 366 SSSPRKQLSESSDDDYDDVDIPTPAEDTPPPLPPKPKFRSPSDEGPGSM-----GDDG 418
>gi|6005810 mitogen-activated protein kinase kinase kinase kinase 1
isoform 2 [Homo sapiens]
Length = 833
Score = 37.7 bits (86), Expect = 0.006
Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 23/118 (19%)
Query: 26 EQPPPPPLWIRPPGVAHAGQLLGVPE-----QHRKRKIDAGTMAEPSASPSKRRDSGD-- 78
E+P PP R H LG+P+ +H + + G P A+ ++ + D
Sbjct: 306 EEPELPPAIPRRIRSTHRSSSLGIPDADCCRRHMEFRKLRGMETRPPANTARLQPPRDLR 365
Query: 79 NSAPSGQEREDHGLETGD-----------PPLPPPPVLPGPGEELPGARLPGGGGDDG 125
+S+P Q E + D PPLPP P P +E PG+ GDDG
Sbjct: 366 SSSPRKQLSESSDDDYDDVDIPTPAEDTPPPLPPKPKFRSPSDEGPGSM-----GDDG 418
>gi|21687188 hypothetical protein LOC146325 [Homo sapiens]
Length = 571
Score = 37.4 bits (85), Expect = 0.008
Identities = 31/88 (35%), Positives = 36/88 (40%), Gaps = 20/88 (22%)
Query: 64 AEPSASPSKRRDSGDNSAPSGQEREDHGLETGDPPL--------PPPPVL------PGPG 109
++P P R +G AP + H L G P PPPPV PGP
Sbjct: 96 SDPGRQPQGARPTGAAPAPDLVVADIHSLHCGGGPKSRAKGSPGPPPPVARATRKGPGPS 155
Query: 110 EELPGARLPGGGGDD---GAG---RAGP 131
LP + PG GGD GAG AGP
Sbjct: 156 GLLPESWKPGMGGDPRGVGAGDMASAGP 183
Score = 34.3 bits (77), Expect = 0.068
Identities = 30/92 (32%), Positives = 40/92 (43%), Gaps = 4/92 (4%)
Query: 29 PPPPLWIRPPGVAHAGQLLGVPEQHRKRKIDAGTMAE-PSASPSKRRDSGDNSAPSGQER 87
P P + R PG G+L + +R++ G+ E P ASPS R +S P+G
Sbjct: 311 PWPRVTPRDPG--QEGELERAAQSDPRRRLSLGSRLELPKASPSLTRFCSRSSLPTGSSV 368
Query: 88 EDHGLETGDPPLPPPPVLPGPGEELPGARLPG 119
E GDP P P GP P +PG
Sbjct: 369 MLWP-EDGDPGGPETPGPEGPLPLQPRGPVPG 399
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.137 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,404,753
Number of Sequences: 37866
Number of extensions: 925178
Number of successful extensions: 8348
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 672
Number of HSP's that attempted gapping in prelim test: 5728
Number of HSP's gapped (non-prelim): 2851
length of query: 194
length of database: 18,247,518
effective HSP length: 97
effective length of query: 97
effective length of database: 14,574,516
effective search space: 1413728052
effective search space used: 1413728052
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.