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Search of human proteins with 157266298
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|157266298 anti-Mullerian hormone [Homo sapiens]
(560 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|157266298 anti-Mullerian hormone [Homo sapiens] 1129 0.0
gi|110349792 growth differentiation factor 1 [Homo sapiens] 64 3e-10
gi|61835232 growth differentiation factor 7 preproprotein [Homo ... 51 2e-06
gi|5031613 growth differentiation factor 11 precursor [Homo sapi... 49 9e-06
gi|48475062 growth differentiation factor 6 precursor [Homo sapi... 48 2e-05
gi|13899338 activin beta E [Homo sapiens] 48 2e-05
gi|4885259 myostatin [Homo sapiens] 48 3e-05
gi|4503969 growth differentiation factor 5 preproprotein [Homo s... 47 4e-05
gi|7705308 growth differentiation factor 2 [Homo sapiens] 47 4e-05
gi|4758826 neurturin preproprotein [Homo sapiens] 47 5e-05
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 46 1e-04
gi|154146199 sal-like 3 [Homo sapiens] 46 1e-04
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 45 2e-04
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 44 3e-04
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 44 4e-04
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 44 5e-04
gi|7656928 bone morphogenetic protein 10 preproprotein [Homo sap... 44 5e-04
gi|157276597 bone morphogenetic protein 4 preproprotein [Homo sa... 43 7e-04
gi|157276595 bone morphogenetic protein 4 preproprotein [Homo sa... 43 7e-04
gi|157276593 bone morphogenetic protein 4 preproprotein [Homo sa... 43 7e-04
gi|4502425 bone morphogenetic protein 6 preproprotein [Homo sapi... 43 9e-04
gi|4557369 bone morphogenetic protein 2 preproprotein [Homo sapi... 42 0.001
gi|63025222 transforming growth factor, beta 1 [Homo sapiens] 42 0.001
gi|148229134 ring finger and KH domain containing 2 [Homo sapiens] 41 0.003
gi|154813204 inhibin beta B subunit preproprotein [Homo sapiens] 41 0.003
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 40 0.004
gi|4502427 bone morphogenetic protein 7 precursor [Homo sapiens] 40 0.006
gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo ... 40 0.006
gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo ... 40 0.006
gi|153792495 growth differentiation factor 15 [Homo sapiens] 40 0.007
>gi|157266298 anti-Mullerian hormone [Homo sapiens]
Length = 560
Score = 1129 bits (2920), Expect = 0.0
Identities = 560/560 (100%), Positives = 560/560 (100%)
Query: 1 MRDLPLTSLALVLSALGALLGTEALRAEEPAVGTSGLIFREDLDWPPGSPQEPLCLVALG 60
MRDLPLTSLALVLSALGALLGTEALRAEEPAVGTSGLIFREDLDWPPGSPQEPLCLVALG
Sbjct: 1 MRDLPLTSLALVLSALGALLGTEALRAEEPAVGTSGLIFREDLDWPPGSPQEPLCLVALG 60
Query: 61 GDSNGSSSPLRVVGALSAYEQAFLGAVQRARWGPRDLATFGVCNTGDRQAALPSLRRLGA 120
GDSNGSSSPLRVVGALSAYEQAFLGAVQRARWGPRDLATFGVCNTGDRQAALPSLRRLGA
Sbjct: 61 GDSNGSSSPLRVVGALSAYEQAFLGAVQRARWGPRDLATFGVCNTGDRQAALPSLRRLGA 120
Query: 121 WLRDPGGQRLVVLHLEEVTWEPTPSLRFQEPPPGGAGPPELALLVLYPGPGPEVTVTRAG 180
WLRDPGGQRLVVLHLEEVTWEPTPSLRFQEPPPGGAGPPELALLVLYPGPGPEVTVTRAG
Sbjct: 121 WLRDPGGQRLVVLHLEEVTWEPTPSLRFQEPPPGGAGPPELALLVLYPGPGPEVTVTRAG 180
Query: 181 LPGAQSLCPSRDTRYLVLAVDRPAGAWRGSGLALTLQPRGEDSRLSTARLQALLFGDDHR 240
LPGAQSLCPSRDTRYLVLAVDRPAGAWRGSGLALTLQPRGEDSRLSTARLQALLFGDDHR
Sbjct: 181 LPGAQSLCPSRDTRYLVLAVDRPAGAWRGSGLALTLQPRGEDSRLSTARLQALLFGDDHR 240
Query: 241 CFTRMTPALLLLPRSEPAPLPAHGQLDTVPFPPPRPSAELEESPPSADPFLETLTRLVRA 300
CFTRMTPALLLLPRSEPAPLPAHGQLDTVPFPPPRPSAELEESPPSADPFLETLTRLVRA
Sbjct: 241 CFTRMTPALLLLPRSEPAPLPAHGQLDTVPFPPPRPSAELEESPPSADPFLETLTRLVRA 300
Query: 301 LRVPPARASAPRLALDPDALAGFPQGLVNLSDPAALERLLDGEEPLLLLLRPTAATTGDP 360
LRVPPARASAPRLALDPDALAGFPQGLVNLSDPAALERLLDGEEPLLLLLRPTAATTGDP
Sbjct: 301 LRVPPARASAPRLALDPDALAGFPQGLVNLSDPAALERLLDGEEPLLLLLRPTAATTGDP 360
Query: 361 APLHDPTSAPWATALARRVAAELQAAAAELRSLPGLPPATAPLLARLLALCPGGPGGLGD 420
APLHDPTSAPWATALARRVAAELQAAAAELRSLPGLPPATAPLLARLLALCPGGPGGLGD
Sbjct: 361 APLHDPTSAPWATALARRVAAELQAAAAELRSLPGLPPATAPLLARLLALCPGGPGGLGD 420
Query: 421 PLRALLLLKALQGLRVEWRGRDPRGPGRAQRSAGATAADGPCALRELSVDLRAERSVLIP 480
PLRALLLLKALQGLRVEWRGRDPRGPGRAQRSAGATAADGPCALRELSVDLRAERSVLIP
Sbjct: 421 PLRALLLLKALQGLRVEWRGRDPRGPGRAQRSAGATAADGPCALRELSVDLRAERSVLIP 480
Query: 481 ETYQANNCQGVCGWPQSDRNPRYGNHVVLLLKMQARGAALARPPCCVPTAYAGKLLISLS 540
ETYQANNCQGVCGWPQSDRNPRYGNHVVLLLKMQARGAALARPPCCVPTAYAGKLLISLS
Sbjct: 481 ETYQANNCQGVCGWPQSDRNPRYGNHVVLLLKMQARGAALARPPCCVPTAYAGKLLISLS 540
Query: 541 EERISAHHVPNMVATECGCR 560
EERISAHHVPNMVATECGCR
Sbjct: 541 EERISAHHVPNMVATECGCR 560
>gi|110349792 growth differentiation factor 1 [Homo sapiens]
Length = 372
Score = 64.3 bits (155), Expect = 3e-10
Identities = 92/304 (30%), Positives = 108/304 (35%), Gaps = 53/304 (17%)
Query: 273 PPRPSAELEESPPSADPFLETLTRLVRALRVPPA-RASAPRLALD-PDALAGFPQGLVNL 330
P R + P SA T + V PA R S RL L A A P+G L
Sbjct: 106 PDRGAPTRASEPASAAGHCPEWTVVFDLSAVEPAERPSRARLELRFAAAAAAAPEGGWEL 165
Query: 331 SDPAALERLLDGEEPLLLLLRPTAATTGDPAPLHDPTSAPWATALARRVAAELQAAAAEL 390
S A + G +P +LLR G P V AEL AA
Sbjct: 166 SVAQAGQGA--GADPGPVLLRQLVPALGPP------------------VRAELLGAAWAR 205
Query: 391 RSLPGLPPATAPLLARL-LALCPGGPGGLGDPLRALLLLKALQGLRVEWRGRDPR---GP 446
A+ P RL LAL P P A LLL L DPR
Sbjct: 206 N-------ASWPRSLRLALALRPRAPAACARLAEASLLLVTL----------DPRLCHPL 248
Query: 447 GRAQRSAGATAADGP---CALRELSVDLRA---ERSVLIPETYQANNCQGVCGWP---QS 497
R +R A GP C R L V R R V+ P + AN CQG C P
Sbjct: 249 ARPRRDAEPVLGGGPGGACRARRLYVSFREVGWHRWVIAPRGFLANYCQGQCALPVALSG 308
Query: 498 DRNPRYGNHVVLLLKMQARGAALARPPCCVPTAYAG-KLLISLSEERISAHHVPNMVATE 556
P NH VL M A A PCCVP + +L + + + +MV E
Sbjct: 309 SGGPPALNHAVLRALMHAAAPGAADLPCCVPARLSPISVLFFDNSDNVVLRQYEDMVVDE 368
Query: 557 CGCR 560
CGCR
Sbjct: 369 CGCR 372
>gi|61835232 growth differentiation factor 7 preproprotein [Homo
sapiens]
Length = 450
Score = 51.2 bits (121), Expect = 2e-06
Identities = 51/192 (26%), Positives = 78/192 (40%), Gaps = 25/192 (13%)
Query: 374 ALARRVAAELQAAAAELRSLPGLPPATAPLLARLLALCPGGPGGLGDPLRALLLLKALQG 433
+L R + A+ +A A L S P P T R + GG AL + QG
Sbjct: 279 SLFREIRAQARALGAALASEPLPDPGTGTASPRAVI------GGRRRRRTALAGTRTAQG 332
Query: 434 LRVEWRGRDPRGPGRAQRSAGATAADGPCALRELSVDLRA---ERSVLIPETYQANNCQG 490
G RG GR RS C+ + L VD + + ++ P Y+A +C+G
Sbjct: 333 SG----GGAGRGHGRRGRSR--------CSRKPLHVDFKELGWDDWIIAPLDYEAYHCEG 380
Query: 491 VCGWP-QSDRNPRYGNHVVLLLKMQARGAALARPPCCVPTAYAG-KLLISLSEERISAHH 548
+C +P +S P NH ++ + + A CCVP + +L + +
Sbjct: 381 LCDFPLRSHLEPT--NHAIIQTLLNSMAPDAAPASCCVPARLSPISILYIDAANNVVYKQ 438
Query: 549 VPNMVATECGCR 560
+MV CGCR
Sbjct: 439 YEDMVVEACGCR 450
>gi|5031613 growth differentiation factor 11 precursor [Homo
sapiens]
Length = 407
Score = 49.3 bits (116), Expect = 9e-06
Identities = 43/159 (27%), Positives = 70/159 (44%), Gaps = 28/159 (17%)
Query: 408 LALCPGGPGGLGDPLRALLLLKALQGLRVEWRGRDPRGPGRAQRSAGAT----AADGPCA 463
LA+ GPG G L + L+ L+ + R++R+ G +++ C
Sbjct: 269 LAVTSLGPGAEG--LHPFMELRVLENTK------------RSRRNLGLDCDEHSSESRCC 314
Query: 464 LRELSVDLRAERS--VLIPETYQANNCQGVCGWPQSDRNPRYGNHVVLLLKMQARGAALA 521
L+VD A ++ P+ Y+AN C G C + + P H L+ + RG+A
Sbjct: 315 RYPLTVDFEAFGWDWIIAPKRYKANYCSGQCEYMFMQKYP----HTHLVQQANPRGSA-- 368
Query: 522 RPPCCVPTAYAG-KLLISLSEERISAHHVPNMVATECGC 559
PCC PT + +L +++I +P MV CGC
Sbjct: 369 -GPCCTPTKMSPINMLYFNDKQQIIYGKIPGMVVDRCGC 406
>gi|48475062 growth differentiation factor 6 precursor [Homo
sapiens]
Length = 455
Score = 48.1 bits (113), Expect = 2e-05
Identities = 34/129 (26%), Positives = 55/129 (42%), Gaps = 16/129 (12%)
Query: 446 PGRAQRSAGATAADGP---------CALRELSVDLRA---ERSVLIPETYQANNCQGVCG 493
PGR +R + G C+ + L V+ + + ++ P Y+A +C+GVC
Sbjct: 329 PGRRRRRTAFASRHGKRHGKKSRLRCSKKPLHVNFKELGWDDWIIAPLEYEAYHCEGVCD 388
Query: 494 WP-QSDRNPRYGNHVVLLLKMQARGAALARPPCCVPTAYAG-KLLISLSEERISAHHVPN 551
+P +S P NH ++ M + P CCVPT +L + + +
Sbjct: 389 FPLRSHLEPT--NHAIIQTLMNSMDPGSTPPSCCVPTKLTPISILYIDAGNNVVYKQYED 446
Query: 552 MVATECGCR 560
MV CGCR
Sbjct: 447 MVVESCGCR 455
>gi|13899338 activin beta E [Homo sapiens]
Length = 350
Score = 48.1 bits (113), Expect = 2e-05
Identities = 42/133 (31%), Positives = 56/133 (42%), Gaps = 9/133 (6%)
Query: 434 LRVEWRGRDPRGPGRAQRSAGATAADGP-CALRELSVDLRA---ERSVLIPETYQANNCQ 489
L ++ R +P G GRA+R P C R+ VD + +L PE YQ N C
Sbjct: 219 LELKIRANEP-GAGRARRRTPTCEPATPLCCRRDHYVDFQELGWRDWILQPEGYQLNYCS 277
Query: 490 GVCGWPQSDRNPRYGN--HVVLLLKMQARGAALARPPCCVPTAYAGKLLISLSEE-RISA 546
G C P +P H + ++A A CCVPTA L+ L +
Sbjct: 278 GQCP-PHLAGSPGIAASFHSAVFSLLKANNPWPASTSCCVPTARRPLSLLYLDHNGNVVK 336
Query: 547 HHVPNMVATECGC 559
VP+MV CGC
Sbjct: 337 TDVPDMVVEACGC 349
>gi|4885259 myostatin [Homo sapiens]
Length = 375
Score = 47.8 bits (112), Expect = 3e-05
Identities = 36/121 (29%), Positives = 55/121 (45%), Gaps = 14/121 (11%)
Query: 446 PGRAQRSAGAT----AADGPCALRELSVDLRAERS--VLIPETYQANNCQGVCGWPQSDR 499
P R++R G + + C L+VD A ++ P+ Y+AN C G C + +
Sbjct: 261 PKRSRRDFGLDCDEHSTESRCCRYPLTVDFEAFGWDWIIAPKRYKANYCSGECEFVFLQK 320
Query: 500 NPRYGNHVVLLLKMQARGAALARPPCCVPTAYAG-KLLISLSEERISAHHVPNMVATECG 558
P H L+ + RG+A PCC PT + +L +E+I +P MV CG
Sbjct: 321 YP----HTHLVHQANPRGSA---GPCCTPTKMSPINMLYFNGKEQIIYGKIPAMVVDRCG 373
Query: 559 C 559
C
Sbjct: 374 C 374
>gi|4503969 growth differentiation factor 5 preproprotein [Homo
sapiens]
Length = 501
Score = 47.4 bits (111), Expect = 4e-05
Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 7/104 (6%)
Query: 462 CALRELSV---DLRAERSVLIPETYQANNCQGVCGWP-QSDRNPRYGNHVVLLLKMQARG 517
C+ + L V D+ + ++ P Y+A +C+G+C +P +S P NH V+ M +
Sbjct: 400 CSRKALHVNFKDMGWDDWIIAPLEYEAFHCEGLCEFPLRSHLEPT--NHAVIQTLMNSMD 457
Query: 518 AALARPPCCVPTAYAG-KLLISLSEERISAHHVPNMVATECGCR 560
P CCVPT + +L S + +MV CGCR
Sbjct: 458 PESTPPTCCVPTRLSPISILFIDSANNVVYKQYEDMVVESCGCR 501
>gi|7705308 growth differentiation factor 2 [Homo sapiens]
Length = 429
Score = 47.4 bits (111), Expect = 4e-05
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 3/115 (2%)
Query: 448 RAQRSAGATAADGPCALRELSVDLRAERSVLIPETYQANNCQGVCGWPQSDRNPRYGNHV 507
R +RSAGA + +LR D+ + ++ P+ Y+A C+G C +P +D + H
Sbjct: 316 RRKRSAGAGSHCQKTSLRVNFEDIGWDSWIIAPKEYEAYECKGGCFFPLAD-DVTPTKHA 374
Query: 508 VLLLKMQARGAALARPPCCVPTAYAGKLLISLSEERISA--HHVPNMVATECGCR 560
++ + + CCVPT + ++ + + +H M ECGCR
Sbjct: 375 IVQTLVHLKFPTKVGKACCVPTKLSPISVLYKDDMGVPTLKYHYEGMSVAECGCR 429
>gi|4758826 neurturin preproprotein [Homo sapiens]
Length = 197
Score = 47.0 bits (110), Expect = 5e-05
Identities = 55/193 (28%), Positives = 69/193 (35%), Gaps = 21/193 (10%)
Query: 371 WATALARRVAAELQAAAAELRSLPGLPPATAPLLARLLALCPGGPGGLGDPLRALLLLKA 430
W ++ L A L LP A LA+ AL G P + LR L
Sbjct: 21 WMCREGLLLSHRLGPALVPLHRLPRTLDARIARLAQYRALLQGAPDAM--ELREL----- 73
Query: 431 LQGLRVEWRGRDP---RGPGRAQRSAGATAADGPCALRELSVDL-RAERSVLIPETYQAN 486
W GR P R G +R A A PC LREL V + ET
Sbjct: 74 -----TPWAGRPPGPRRRAGPRRRRARARLGARPCGLRELEVRVSELGLGYASDETVLFR 128
Query: 487 NCQGVCGWPQSDRNPRYGNHVVLLLKMQARGAALARPPCCVPTAYAGKLLISLSEERISA 546
C G C + R G L + + R + PCC PTAY + +S +
Sbjct: 129 YCAGAC--EAAARVYDLGLR-RLRQRRRLRRERVRAQPCCRPTAYEDE--VSFLDAHSRY 183
Query: 547 HHVPNMVATECGC 559
H V + A EC C
Sbjct: 184 HTVHELSARECAC 196
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 45.8 bits (107), Expect = 1e-04
Identities = 105/418 (25%), Positives = 136/418 (32%), Gaps = 45/418 (10%)
Query: 142 PTPSLRFQEPPPGGAGPPELALLVLYPGPGPEVTVTRAGLPGAQSLCPSRDTRYLVLAVD 201
P+P L PP A PP LAL L P P + + L P+ +L+ A
Sbjct: 607 PSPPLSPLATPPPQA-PPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPF 665
Query: 202 RPAGAWRGSGLALTLQPRGED--SRLSTARLQALLFGDDHRCFTRMTPALLLLPRSEPAP 259
P + + P S +T QA P+L P P
Sbjct: 666 SPPPS---PPVQAPFSPPASPPVSPSATPPSQA-------------PPSLAAPPLQVPPS 709
Query: 260 LPAHGQLDTVPFPPPRPS-------AELEESPPSADPFLETLTRLVRALRVPPARASAPR 312
PA + PPP+ ++ SPP++ P + T RVPP A AP
Sbjct: 710 PPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSAT---PPPRVPPLLA-APP 765
Query: 313 LALDPDALAGFPQGLVNLSDPAALERLLDGEEPLLLLLRPTAATTGDPAPLHDPTSAPWA 372
L + P A P + P A L PL L P A+ G AP S P
Sbjct: 766 LQVPPSPPASLPMSPLAKPPPQAPPAL--ATPPLQALPSPPASFPGQ-APFSPSASLP-M 821
Query: 373 TALARRVAAELQAAAAELRSLPGLPPATAPLLARLLALCPGGPGGLGDPLRALLLLKALQ 432
+ LA AA L +P PPA+ L A PG + P L L
Sbjct: 822 SPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPP 881
Query: 433 GLRVEWRGRDPRGPGRAQRSAGATAADGPCALRELSVDLRAERSVLIPETYQANNCQGVC 492
GP A S+ AT+ P LR + P + C
Sbjct: 882 PPPSRSPSSTLSGPDLAGHSSSATST--PEELRGYDSGPEGGAAASPPPDAELAACH-PA 938
Query: 493 GWPQSDRNPRYGNHVVLLLKMQARGAALARPPCCVPTAYAGKLLISLSEERISAHHVP 550
W + P L A GA L PP P + G I +E SA P
Sbjct: 939 AWSRGPAPP--------LAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAP 988
Score = 41.6 bits (96), Expect = 0.002
Identities = 45/155 (29%), Positives = 59/155 (38%), Gaps = 10/155 (6%)
Query: 257 PAPLPAHGQLDTVPFPPPRPSAELEESPPSADPFLET--LTRL----VRALRVPPARASA 310
PAP P + PPP + + PP A P L + L L + L PP +A
Sbjct: 564 PAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQA-P 622
Query: 311 PRLALDPDALAGFPQGLVNLSDPAALERLLDGEEPLLLLLRPTAATTGDP--APLHDPTS 368
P LAL P P LS A + LL P + P AP P S
Sbjct: 623 PXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPAS 682
Query: 369 APWATALARRVAAELQAAAAELRSLPGLPPATAPL 403
P + + A AA L+ +P PPA+ P+
Sbjct: 683 PPVSPSATPPSQAPPSLAAPPLQ-VPPSPPASPPM 716
Score = 36.2 bits (82), Expect = 0.082
Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 23/152 (15%)
Query: 257 PAPLPAHGQLDT-VPFPPPRPSA----ELEESPPSADPFLETLTRLVRALRVPPARASAP 311
PA LP L T +P PP PSA + SPP+ P + ++ PP+ + P
Sbjct: 328 PATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIP 387
Query: 312 RLALDPDALAGFPQGLVNLSDPAALERLLDGEEPLLLLLRPTAATTGDPAPLHDPTSAPW 371
+ + P L + S A P L L ATT +P T + +
Sbjct: 388 PIQV--------PHSLTSPSLQA---------PPSPLALSSLQATTSLGSPTLQATHS-F 429
Query: 372 ATALARRVAAELQAAAAELRSLPGLPPATAPL 403
T R+ A L + + + P PP APL
Sbjct: 430 LTMSPRQTQASLTSPSRPASTPPDSPPLQAPL 461
Score = 34.3 bits (77), Expect = 0.31
Identities = 44/166 (26%), Positives = 55/166 (33%), Gaps = 21/166 (12%)
Query: 253 PRSEPAPLPAHGQLDTVPFPPPRPSAELEESPPSADPFLETLTRLVRALRVPPARASAPR 312
PR + H + P RPSA P++ + T L R P+ PR
Sbjct: 205 PRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPR 264
Query: 313 LALDPDALAGFPQGLVNLSDPAALERLLDGEEPLLLLLRPTAAT---------------- 356
P P+GL L P D L L AT
Sbjct: 265 APAHPSQPK--PKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDN 322
Query: 357 TGDPAPLHDPTSAPWATALARRVAAELQAAAAELRSLPGLPPATAP 402
P P P S P AT L +A +A L++LP PPAT P
Sbjct: 323 AATPLPATLPPSPPLATPLP--LAPPSPSAPPSLQTLPS-PPATPP 365
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 45.8 bits (107), Expect = 1e-04
Identities = 82/300 (27%), Positives = 104/300 (34%), Gaps = 66/300 (22%)
Query: 126 GGQRLVVLHLEEVTWEPTPSLRFQEPPPGGAGPPELALLVLYPGPGPEVTVTRAGLPGAQ 185
G R V E + EP R PPP PP A Y P VT+
Sbjct: 122 GEARPVEKEAEPMDAEPAGDTRAPRPPPAAPAPPTPA----YGAPSTNVTLEAL------ 171
Query: 186 SLCPSRDTRYLVLAVDRPA----GAWRGSGLALTLQPRGEDSRLSTARLQALLFGDDHRC 241
T+ V + A G+ G G+A P L +L AL H+
Sbjct: 172 -----LSTKVAVAQFSQGARAAGGSGAGGGVAAAAVP------LILEQLMALQQQQIHQ- 219
Query: 242 FTRMTPALLLLPRSEPAPLPAHGQLDTVPFPPPRPSAELEESPPSADPFLETLTRLVRAL 301
L L+ + Q+ + PPPRPS +P +
Sbjct: 220 -------LQLIEQ-------IRSQVALMQRPPPRPSLSPAAAPSAPG------------- 252
Query: 302 RVPPARASAPRLALDPDALAGFPQGLVNLSDPAALERLLDGEEPLLLLLRPT--AATTGD 359
PA + P LA P AG P + S PAA +G +P L RP A+T G
Sbjct: 253 ---PAPSQLPGLAALP-LSAGAPAAAIAGSGPAA-PAAFEGAQP---LSRPESGASTPGG 304
Query: 360 PAPLHDPTSAPWATALARRVAAEL-QAAAAELRSLPGLPPATAPLLARLLALCPGGPGGL 418
PA P + A A A A Q+AA+ PPA AP LL PG P L
Sbjct: 305 PAEPSAPAAPSAAPAPAAPAPAPAPQSAASSQPQSASTPPALAP--GSLLGAAPGLPSPL 362
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 44.7 bits (104), Expect = 2e-04
Identities = 88/334 (26%), Positives = 115/334 (34%), Gaps = 80/334 (23%)
Query: 127 GQRLVVLHLEEVTWEPTPSLRFQEPPPGGAGPPELALLVLYPGPGPEVTVTRAGLPGAQS 186
G+ +VV++ P P PPPG PEL+ PGP P+V LP +
Sbjct: 1006 GRTVVVVNNPRAPLGPVPV----RPPPG----PELSAQPT-PGPVPQV------LPASLM 1050
Query: 187 LCPSRDTRYLVLAVDRPAGAWRGSGLALTLQPRGEDSRLSTARLQALLFGDDHRCFTRMT 246
+ S L+ PA G L LQP +L G T
Sbjct: 1051 VSASPAGPPLI-----PASRPPGPVLLPPLQPNSGSLPQVLPSPLGVLSGTSRP----PT 1101
Query: 247 PALLLLPRSEPAPLPAHGQLDTVPFPPPRPSAELEES--------PPSADPFLETLTRLV 298
P L L P + PAP+ P PPP S+ L+ PP+A T T
Sbjct: 1102 PTLSLKP-TPPAPVRLS------PAPPPGSSSLLKPLTVPPGYTFPPAAATTTSTTTATA 1154
Query: 299 RALRVPPARASAPRLALDPDALAGFPQG-LVNLSDPAALERL----LDGEEPLLLLLRPT 353
VP + RL L PD A P G +V++ A+L + G +PL ++
Sbjct: 1155 TTTAVPAPTPAPQRLILSPDMQARLPSGEVVSIGQLASLAQRPVANAGGSKPLTFQIQGN 1214
Query: 354 AAT----------TGDPAPL-------------HDPTSAPWATALARRVAAELQAAAAEL 390
T G P PL H S P AL + VA +
Sbjct: 1215 KLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQHHLISQPAHVALIQAVAP--TPGPTPV 1272
Query: 391 RSLPGLPPATAPLLARLLALCPGGPGGLGDPLRA 424
LP P+T P P GL PL A
Sbjct: 1273 SVLPSSTPSTTP-----------APTGLSLPLAA 1295
Score = 42.0 bits (97), Expect = 0.001
Identities = 69/279 (24%), Positives = 95/279 (34%), Gaps = 20/279 (7%)
Query: 152 PPGGAGPPELALLVLYPGPGPEVTVTRAGLPGAQSLCPSRDTR------------YLVLA 199
PPG PP A T A P Q L S D + L
Sbjct: 1134 PPGYTFPPAAATTTSTTTATATTTAVPAPTPAPQRLILSPDMQARLPSGEVVSIGQLASL 1193
Query: 200 VDRPAGAWRGSGLALTLQPRGEDSRLSTARLQALLFGDDHRCFTRMTPALLLLPRSEPAP 259
RP A G LT Q +G L+ A+++ L G + + +
Sbjct: 1194 AQRPV-ANAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQHHLIS 1252
Query: 260 LPAHGQL--DTVPFPPPRPSAELEESPPSADPFLETLTRLVRALRVPPARASAPRLALDP 317
PAH L P P P P + L S PS P L+ + A +VPP + +
Sbjct: 1253 QPAHVALIQAVAPTPGPTPVSVLPSSTPSTTPAPTGLSLPLAANQVPPTMVN--NTGVVK 1310
Query: 318 DALAGFPQ-GLVNLSDPAALERLLDGEEPLLLLLRPTAATTGDPAPLHDPTSAPWAT-AL 375
+ P+ GL + A R P +L RPT P P AP T L
Sbjct: 1311 IVVRQAPRDGLTPVPPLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGTARAPMPTPTL 1370
Query: 376 ARRVAAELQAAAAEL-RSLPGLPPATAPLLARLLALCPG 413
R + + + + E+ S PG P T + + PG
Sbjct: 1371 VRPLLKLVHSPSPEVSASAPGAAPLTISSPLHVPSSLPG 1409
Score = 33.1 bits (74), Expect = 0.69
Identities = 59/251 (23%), Positives = 82/251 (32%), Gaps = 40/251 (15%)
Query: 159 PELALLVLYPGPGPEVTVTRAGLPGAQSLCPSRDTRYLVLAVDRPAGAWRGSGLALTLQP 218
P+ A+L P P A PGA + S T V+A + G+ LA
Sbjct: 1593 PQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMA----PSSTPGTSLASASPV 1648
Query: 219 RGEDSRLSTARLQALLFGDDHRCFTRMTPALLLLPRSEPAPLPAHGQLDTVPFPPPRPSA 278
L+ + Q +LP P+PLP+ T+ P +
Sbjct: 1649 PAPTPVLAPSSTQT------------------MLPAPVPSPLPSPASTQTLALAPAL-AP 1689
Query: 279 ELEESPPSADPFLETLTRL----VRALRVPPARASAPRLALDPDALAGFPQGLVNLSDPA 334
L S PS L T + L + PA + P A G P G A
Sbjct: 1690 TLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPASSLVPTPAQTLSLAPGPPLGPTQTLSLA 1749
Query: 335 ALERLLDGEEPLLLLLRPTAATTGDPAPLHDPTSAPWATALARRVAAELQAAAAELRSLP 394
L A+ PAP H T AP +++ + A +Q +P
Sbjct: 1750 PAPPL-------------APASPVGPAPAHTLTLAPASSSASLLAPASVQTLTLSPAPVP 1796
Query: 395 GLPPATAPLLA 405
L PA A LA
Sbjct: 1797 TLGPAAAQTLA 1807
Score = 33.1 bits (74), Expect = 0.69
Identities = 49/184 (26%), Positives = 71/184 (38%), Gaps = 46/184 (25%)
Query: 247 PALLLLPRSEPAPLPAHGQLDTVP---FPPPRPSAELEESPPSADPFLETLTRLVRALRV 303
PAL+ +P S P P+ A + +P P P P +++ PP + P A
Sbjct: 2455 PALVPVPVSAPVPISAPNPITILPVHILPSPPPPSQI---PPCSSP----------ACTP 2501
Query: 304 PPARASAPRLALDPDALAGFPQGLVNLSDPAALERLLDGEEPLLL---LLRPTAATTGDP 360
PPA P + P A L+ PLLL + +A+ T P
Sbjct: 2502 PPACTPPPA-----------------HTPPPAQTCLVTPSSPLLLGPPSVPISASVTNLP 2544
Query: 361 APLHDPTSAPWATALARRVAAEL-QAAAAELRSLPGLPP--------ATAPLLARLLALC 411
L P + A ALA + EL A++E SL +PP P+ + L+L
Sbjct: 2545 LGLR-PEAELCAQALASPESLELASVASSETSSLSLVPPKDLLPVAVEILPVSEKNLSLT 2603
Query: 412 PGGP 415
P P
Sbjct: 2604 PSAP 2607
Score = 31.6 bits (70), Expect = 2.0
Identities = 60/226 (26%), Positives = 75/226 (33%), Gaps = 39/226 (17%)
Query: 168 PGPGPEVTVTRAGLPG-AQSLCPSRDTRYLVLAVDRPAGAWRGSGLALTLQPRGEDSRLS 226
P P P T T A P A +L S ++ L L P G + L+LT S L
Sbjct: 1671 PLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLT-----PASSLV 1725
Query: 227 TARLQALLFGDDHRCFTRMT----PALLLLPRSEPAPLPAHGQLDTVPFPPPRPSAELEE 282
Q L T PA L P S P PAH T+ P SA L
Sbjct: 1726 PTPAQTLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAH----TLTLAPASSSASL-- 1779
Query: 283 SPPSADPFLETLT-----------RLVRALRVPPARASAPRLALDPDALAGFPQGLVNLS 331
A ++TLT + L + PA +P A +L G L
Sbjct: 1780 ---LAPASVQTLTLSPAPVPTLGPAAAQTLALAPASTQSP--ASQASSLVVSASGAAPLP 1834
Query: 332 DPAALERLLDGEEPLLLLLR-------PTAATTGDPAPLHDPTSAP 370
+ +EP L LR TA + G P P P P
Sbjct: 1835 VTMVSRLPVSKDEPDTLTLRSGPPSPPSTATSFGGPRPRRQPPPPP 1880
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 44.3 bits (103), Expect = 3e-04
Identities = 106/421 (25%), Positives = 133/421 (31%), Gaps = 50/421 (11%)
Query: 142 PTPSLRFQEPPPGGAGPPELALLVLYPGPGPEVTVTRAGLPGAQ---SLCPSRDTRYLVL 198
P+PS PP + PP L L P P T G P Q S PS L
Sbjct: 298 PSPSA-----PPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLAT 352
Query: 199 AVDRPAGAWRGSGLALTLQPRGED--SRLSTARLQALLFGDDHRCFTRMTPALLLLPRSE 256
+ A L P S L+T QA + LL P S
Sbjct: 353 PPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAP---------NALAVHLLQAPFSP 403
Query: 257 PAPLPAHGQLDTVPFPPPRPSAELEESPPSADPFLETLTRLVRALRVPPARASAPRLALD 316
P P PP PSA +PPS P + L+VPP+ ++P ++
Sbjct: 404 PPSPPVQAPFSPPASPPVSPSA----TPPSQAP----PSLAAPPLQVPPSPPASPPMSPS 455
Query: 317 -------PDALAGFPQGLVNLSDPAALERLLDGEEPLLLLLRPTAATTGDPAPLHDPTSA 369
P LA P + L+ P PL L P A+ G AP S
Sbjct: 456 ATPPPQAPPPLAAPP---LQLAKPPPQAPPALATPPLQALPSPPASFPGQ-APFSPSASL 511
Query: 370 PWATALARRVAAELQAAAAELRSLPGLPPATAPLLARLLALCPGGPGGLGDPLRALLLLK 429
P + LA AA L +P PPA+ L A PG + P L L
Sbjct: 512 P-MSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAP 570
Query: 430 ALQGLRVEWRGRDPRGPGRAQRSAGATAADGPCALRELSVDLRAERSVLIPETYQANNCQ 489
GP A S+ AT+ P LR + P + C
Sbjct: 571 GPPPPPSRSPSSTLSGPDLAGHSSSATST--PEELRGYDSGPEGGAAASPPPDAELAACH 628
Query: 490 GVCGWPQSDRNPRYGNHVVLLLKMQARGAALARPPCCVPTAYAGKLLISLSEERISAHHV 549
W + P L A GA L PP P + G I +E SA
Sbjct: 629 -PAAWSRGPAPP--------LAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPA 679
Query: 550 P 550
P
Sbjct: 680 P 680
Score = 33.9 bits (76), Expect = 0.41
Identities = 42/161 (26%), Positives = 53/161 (32%), Gaps = 13/161 (8%)
Query: 253 PRSEPAPLPAHGQLDTVPFPPPRPSAELEESPPSADPFLETLTRLVRALRVPPARASAPR 312
PR + H + P RPSA P++ + T L R P+ PR
Sbjct: 196 PRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPR 255
Query: 313 LALDPDALAGFPQGLVNLSDPAALERLLDGEEPLLLLLRPTAATTGDPAP---------- 362
P P+GL L P D L L AT AP
Sbjct: 256 APAHPSQPK--PKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQ 313
Query: 363 -LHDPTSAPWATALARRVAAELQAAAAELRSLPGLPPATAP 402
L P + P + A + LQA + L S P P AT P
Sbjct: 314 TLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPP 354
Score = 33.9 bits (76), Expect = 0.41
Identities = 73/303 (24%), Positives = 91/303 (30%), Gaps = 55/303 (18%)
Query: 125 PGGQRLVVLHLEEVTWEPTPSLRFQEP-------------PPGGAGPPELALLVLYPGPG 171
P + +HL + + P PS Q P P PP LA L P
Sbjct: 386 PQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPS 445
Query: 172 PEVTVTRAGLPGAQSLCPSRDTRYLVLAVDRPAGAWRGSGLALTLQPRGEDSRLSTARLQ 231
P P + + PS + L L P L+T LQ
Sbjct: 446 P---------PASPPMSPS------ATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQ 490
Query: 232 ALLFGDDHRCFTRMTP---------ALLLLPRSEPAPLPAHGQLDTVPFPPPRPSAELEE 282
AL F P + L P + P+ A L P PP P+ +
Sbjct: 491 AL--PSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPR 548
Query: 283 SPPSADPFLETL-TRLVRALR--VPPARASAPRLALDPDALAGFPQGLVNLSDPAALERL 339
PP+ P RL AL PP + +P L LAG S P L
Sbjct: 549 RPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSAT--STPEELRGY 606
Query: 340 LDGEEPLLLLLRPTAATTGDPAPLHDPTSAPWATALARRVAAELQAAAAELRSLPGLPPA 399
G P P P +A A +R A L A LP PPA
Sbjct: 607 DSG---------PEGGAAASPPP-DAELAACHPAAWSRGPAPPLAFRGAPGAPLP-WPPA 655
Query: 400 TAP 402
T P
Sbjct: 656 TGP 658
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 43.9 bits (102), Expect = 4e-04
Identities = 98/341 (28%), Positives = 122/341 (35%), Gaps = 52/341 (15%)
Query: 151 PPPGGAGPPELALLVLYPG--PGPEVTVTRAGLPGAQSLCPSRDTRYLVLAVDRPAGAWR 208
PPPGG GPP L PG GP + V SL P + L P+
Sbjct: 578 PPPGGPGPP------LAPGEPEGPSLLVA--------SLLPPPPSDLLPPPSAPPSNLLA 623
Query: 209 GSGLALTLQPRGEDSRLSTARLQALLFGDDHRCFTRMTPALLLLPRSEPAPLPA------ 262
L L P D +A G+ ++P LL P S P L A
Sbjct: 624 SFLPLLALGPTAGDGE-GSAEGAGGPSGEPFSGLGDLSP-LLFPPLSAPPTLIALNSALL 681
Query: 263 HGQLDTVPFPPPRPS--AELEESPPSADPFLETLTRLVRALRVPPARASAPRLALDPDAL 320
LD PP+P + + PP++ T +L P+ + P L P
Sbjct: 682 AATLDPPSGTPPQPCVLSAPQPGPPTSSVTTATTDPGASSLGKAPSNSGRPPQLLSPLLG 741
Query: 321 AGFPQGLVNL-SDPAALERLLDGEEPLL-----LLLRPTAATTGDPAPLHDPTSAPWATA 374
A L +L S P AL LL PLL L L P G P PL + S+P A
Sbjct: 742 ASLLGDLSSLTSSPGALPSLLQPPGPLLSGQLGLQLLPGG---GAPPPLSE-ASSPLACL 797
Query: 375 LARRVAAELQAAAAELRSLPGLPPATA----PLLARLLALCPGGPGGLGDPLRALLLLKA 430
L + ++ E LP PA+A P L AL P P G DP LL
Sbjct: 798 LQ---SLQIPPEQPEAPCLPPESPASALEPEPARPPLSALAP--PHGSPDPPVPELLTGR 852
Query: 431 LQGLRVEWRGRDPRG------PGRAQRSAGATAADGPCALR 465
G R G RG P R R G+ G AL+
Sbjct: 853 GSGKRGRRGGGGLRGINGEARPARG-RKPGSRREPGRLALK 892
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 43.5 bits (101), Expect = 5e-04
Identities = 103/411 (25%), Positives = 129/411 (31%), Gaps = 45/411 (10%)
Query: 152 PPGGAGPPELALLVLYPGPGPEVTVTRAGLPGAQ---SLCPSRDTRYLVLAVDRPAGAWR 208
PP + PP L L P P T G P Q S PS L + A
Sbjct: 342 PPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALA 401
Query: 209 GSGLALTLQPRGED--SRLSTARLQALLFGDDHRCFTRMTPALLLLPRSEPAPLPAHGQL 266
L P S L+T QA + LL P S P P
Sbjct: 402 LPPLQAPPSPPASPPLSPLATPSPQAP---------NALAVHLLQAPFSPPPSPPVQAPF 452
Query: 267 DTVPFPPPRPSAELEESPPSADPFLETLTRLVRALRVPPARASAPRLALD-------PDA 319
PP PSA +PPS P + L+VPP+ ++P ++ P
Sbjct: 453 SPPASPPVSPSA----TPPSQAP----PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPP 504
Query: 320 LAGFPQGLVNLSDPAALERLLDGEEPLLLLLRPTAATTGDPAPLHDPTSAPWATALARRV 379
LA P + L+ P PL L P A+ G AP S P + LA
Sbjct: 505 LAAPP---LQLAKPPPQAPPALATPPLQALPSPPASFPGQ-APFSPSASLP-MSPLATPP 559
Query: 380 AAELQAAAAELRSLPGLPPATAPLLARLLALCPGGPGGLGDPLRALLLLKALQGLRVEWR 439
AA L +P PPA+ L A PG + P L L
Sbjct: 560 PQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSP 619
Query: 440 GRDPRGPGRAQRSAGATAADGPCALRELSVDLRAERSVLIPETYQANNCQGVCGWPQSDR 499
GP A S+ AT+ P LR + P + C W +
Sbjct: 620 SSTLSGPDLAGHSSSATST--PEELRGYDSGPEGGAAASPPPDAELAACH-PAAWSRGPA 676
Query: 500 NPRYGNHVVLLLKMQARGAALARPPCCVPTAYAGKLLISLSEERISAHHVP 550
P L A GA L PP P + G I +E SA P
Sbjct: 677 PP--------LAFRGAPGAPLPWPPATGPGSADGLCTIYETEGPESATPAP 719
Score = 34.3 bits (77), Expect = 0.31
Identities = 43/161 (26%), Positives = 59/161 (36%), Gaps = 14/161 (8%)
Query: 253 PRSEPAPLPAHGQLDTVPFPPPRPSAELEESPPSADPFLETLTRLVRALRVPPARASAPR 312
PR + H + P RPSA P++ + T L R P+ PR
Sbjct: 205 PRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPR 264
Query: 313 LALDPDALAGFPQGLVNLSDPAALERLLDGEEPLLLLLRPTAATTGDPAPLHD---PT-- 367
P P+GL L P D L L AT A L PT
Sbjct: 265 APAHPSQPK--PKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLP 322
Query: 368 SAPWATALARRVAAEL------QAAAAELRSLPGLPPATAP 402
+ P +++L ++A L +A L++LP PPAT P
Sbjct: 323 ATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPS-PPATPP 362
Score = 33.9 bits (76), Expect = 0.41
Identities = 73/303 (24%), Positives = 91/303 (30%), Gaps = 55/303 (18%)
Query: 125 PGGQRLVVLHLEEVTWEPTPSLRFQEP-------------PPGGAGPPELALLVLYPGPG 171
P + +HL + + P PS Q P P PP LA L P
Sbjct: 425 PQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPS 484
Query: 172 PEVTVTRAGLPGAQSLCPSRDTRYLVLAVDRPAGAWRGSGLALTLQPRGEDSRLSTARLQ 231
P P + + PS + L L P L+T LQ
Sbjct: 485 P---------PASPPMSPS------ATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQ 529
Query: 232 ALLFGDDHRCFTRMTP---------ALLLLPRSEPAPLPAHGQLDTVPFPPPRPSAELEE 282
AL F P + L P + P+ A L P PP P+ +
Sbjct: 530 AL--PSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPR 587
Query: 283 SPPSADPFLETL-TRLVRALR--VPPARASAPRLALDPDALAGFPQGLVNLSDPAALERL 339
PP+ P RL AL PP + +P L LAG S P L
Sbjct: 588 RPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSAT--STPEELRGY 645
Query: 340 LDGEEPLLLLLRPTAATTGDPAPLHDPTSAPWATALARRVAAELQAAAAELRSLPGLPPA 399
G P P P +A A +R A L A LP PPA
Sbjct: 646 DSG---------PEGGAAASPPP-DAELAACHPAAWSRGPAPPLAFRGAPGAPLP-WPPA 694
Query: 400 TAP 402
T P
Sbjct: 695 TGP 697
>gi|7656928 bone morphogenetic protein 10 preproprotein [Homo
sapiens]
Length = 424
Score = 43.5 bits (101), Expect = 5e-04
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 4/86 (4%)
Query: 477 VLIPETYQANNCQGVCGWPQSDR-NPRYGNHVVLLLKMQARGAALARPPCCVPTAYAGKL 535
++ P Y+A C+GVC +P ++ P H ++ + + + A CCVPT
Sbjct: 341 IIAPPGYEAYECRGVCNYPLAEHLTPT--KHAIIQALVHLKNSQKASKACCVPTKLEPIS 398
Query: 536 LISLSEERIS-AHHVPNMVATECGCR 560
++ L + ++ M +ECGCR
Sbjct: 399 ILYLDKGVVTYKFKYEGMAVSECGCR 424
>gi|157276597 bone morphogenetic protein 4 preproprotein [Homo
sapiens]
Length = 408
Score = 43.1 bits (100), Expect = 7e-04
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 477 VLIPETYQANNCQGVCGWPQSDRNPRYGNHVVLLLKMQARGAALARPPCCVPTAYAGKLL 536
++ P YQA C G C +P +D + NH ++ + + +++ + CCVPT + +
Sbjct: 326 IVAPPGYQAFYCHGDCPFPLAD-HLNSTNHAIVQTLVNSVNSSIPK-ACCVPTELSAISM 383
Query: 537 ISLSE-ERISAHHVPNMVATECGCR 560
+ L E +++ + MV CGCR
Sbjct: 384 LYLDEYDKVVLKNYQEMVVEGCGCR 408
>gi|157276595 bone morphogenetic protein 4 preproprotein [Homo
sapiens]
Length = 408
Score = 43.1 bits (100), Expect = 7e-04
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 477 VLIPETYQANNCQGVCGWPQSDRNPRYGNHVVLLLKMQARGAALARPPCCVPTAYAGKLL 536
++ P YQA C G C +P +D + NH ++ + + +++ + CCVPT + +
Sbjct: 326 IVAPPGYQAFYCHGDCPFPLAD-HLNSTNHAIVQTLVNSVNSSIPK-ACCVPTELSAISM 383
Query: 537 ISLSE-ERISAHHVPNMVATECGCR 560
+ L E +++ + MV CGCR
Sbjct: 384 LYLDEYDKVVLKNYQEMVVEGCGCR 408
>gi|157276593 bone morphogenetic protein 4 preproprotein [Homo
sapiens]
Length = 408
Score = 43.1 bits (100), Expect = 7e-04
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 477 VLIPETYQANNCQGVCGWPQSDRNPRYGNHVVLLLKMQARGAALARPPCCVPTAYAGKLL 536
++ P YQA C G C +P +D + NH ++ + + +++ + CCVPT + +
Sbjct: 326 IVAPPGYQAFYCHGDCPFPLAD-HLNSTNHAIVQTLVNSVNSSIPK-ACCVPTELSAISM 383
Query: 537 ISLSE-ERISAHHVPNMVATECGCR 560
+ L E +++ + MV CGCR
Sbjct: 384 LYLDEYDKVVLKNYQEMVVEGCGCR 408
>gi|4502425 bone morphogenetic protein 6 preproprotein [Homo
sapiens]
Length = 513
Score = 42.7 bits (99), Expect = 9e-04
Identities = 29/102 (28%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Query: 462 CALRELSV---DLRAERSVLIPETYQANNCQGVCGWPQSDRNPRYGNHVVLLLKMQARGA 518
C EL V DL + ++ P+ Y AN C G C +P + + NH ++ +
Sbjct: 412 CRKHELYVSFQDLGWQDWIIAPKGYAANYCDGECSFP-LNAHMNATNHAIVQTLVHLMNP 470
Query: 519 ALARPPCCVPTAY-AGKLLISLSEERISAHHVPNMVATECGC 559
PCC PT A +L + NMV CGC
Sbjct: 471 EYVPKPCCAPTKLNAISVLYFDDNSNVILKKYRNMVVRACGC 512
>gi|4557369 bone morphogenetic protein 2 preproprotein [Homo
sapiens]
Length = 396
Score = 42.4 bits (98), Expect = 0.001
Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 477 VLIPETYQANNCQGVCGWPQSDRNPRYGNHVVLLLKMQARGAALARPPCCVPTAYAGKLL 536
++ P Y A C G C +P +D + NH ++ + + + + + CCVPT + +
Sbjct: 314 IVAPPGYHAFYCHGECPFPLAD-HLNSTNHAIVQTLVNSVNSKIPK-ACCVPTELSAISM 371
Query: 537 ISLSE-ERISAHHVPNMVATECGCR 560
+ L E E++ + +MV CGCR
Sbjct: 372 LYLDENEKVVLKNYQDMVVEGCGCR 396
>gi|63025222 transforming growth factor, beta 1 [Homo sapiens]
Length = 390
Score = 42.0 bits (97), Expect = 0.001
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 7/101 (6%)
Query: 462 CALRELSVDLRAE---RSVLIPETYQANNCQGVCGWPQSDRNPRYGNHVVLLLKMQARGA 518
C +R+L +D R + + + P+ Y AN C G C + S + +Y V+ L GA
Sbjct: 293 CCVRQLYIDFRKDLGWKWIHEPKGYHANFCLGPCPYIWS-LDTQYSK-VLALYNQHNPGA 350
Query: 519 ALARPPCCVPTAYAGKLLISLSEERISAHHVPNMVATECGC 559
+ A PCCVP A ++ + + NM+ C C
Sbjct: 351 SAA--PCCVPQALEPLPIVYYVGRKPKVEQLSNMIVRSCKC 389
>gi|148229134 ring finger and KH domain containing 2 [Homo sapiens]
Length = 659
Score = 41.2 bits (95), Expect = 0.003
Identities = 61/212 (28%), Positives = 71/212 (33%), Gaps = 42/212 (19%)
Query: 247 PALLLLPRSEPAPLPAHGQLDTVPFPPPRPSAELE---------------ESPPSADPFL 291
PA L P P P P P PPP ELE + P A+P
Sbjct: 15 PAPLPQPPPPPPPPPP-------PLPPPSGGPELEGDGLLLRERLAALGLDDPSPAEPGA 67
Query: 292 ETLTRLVRAL--------------RVPPARASAPRLA---LDPDALAGFPQGLV-NLSDP 333
L A R PP R AP A L+ D G L +L +
Sbjct: 68 PALRAPAAAAQGQARRAAELSPEERAPPGRPGAPEAAELELEEDEEEGEEAELDGDLLEE 127
Query: 334 AALERLLDGEEPLLLLLRPTAATTGDPAPLHDPTSAPWATALARRVAAELQAAAAELRSL 393
LE + + LLLL P AAT + + AR A E AAAA L
Sbjct: 128 EELEEAEEEDRSSLLLLSPPAATASQTQQIPGGSLGSVLLPAARFDAREAAAAAAAAGVL 187
Query: 394 PGLPPATAPLLARLLALCPGGPGGLGDPLRAL 425
G A + A L GPGG G AL
Sbjct: 188 YGGDDAQGMMAAMLSHAY--GPGGCGAAAAAL 217
>gi|154813204 inhibin beta B subunit preproprotein [Homo sapiens]
Length = 407
Score = 40.8 bits (94), Expect = 0.003
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 12/107 (11%)
Query: 462 CALRELSVDLRA---ERSVLIPETYQANNCQGVC-----GWPQSDRNPRYGNHVVLLLKM 513
C ++ +D R ++ P Y N C+G C G P S + + VV +M
Sbjct: 303 CCRQQFFIDFRLIGWNDWIIAPTGYYGNYCEGSCPAYLAGVPGSASS--FHTAVVNQYRM 360
Query: 514 QARGAALARPPCCVPTAYAGKLLISLSEE-RISAHHVPNMVATECGC 559
+ CC+PT + ++ +E I VPNM+ ECGC
Sbjct: 361 RGLNPGTVNS-CCIPTKLSTMSMLYFDDEYNIVKRDVPNMIVEECGC 406
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 40.4 bits (93), Expect = 0.004
Identities = 51/195 (26%), Positives = 70/195 (35%), Gaps = 45/195 (23%)
Query: 246 TPALLLLPRSEPAPLPAHGQLD------TVPFPPPRP-SAELEESPPSADPFLETLTRLV 298
TPA P PAP PA T PPRP S ++ SPP +E + R
Sbjct: 506 TPATTPAPAPAPAPAPAPALASAATKERTESEVPPRPASPKVTRSPPETAAPVEDMAR-- 563
Query: 299 RALRVPPARASAPRLALDPDALAG---------FPQGLVNLSDPAALERLLDGEE----- 344
R R PAR + P P ++G P G + P AL R L G
Sbjct: 564 RTKRPAPARPTMP-----PPQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRAPT 618
Query: 345 --------PLLLLLRPTAATTGDPAPLHDPTSAPWATALARRVAAELQAAAAE------- 389
P R + + P+P ++P +L+ +L AA AE
Sbjct: 619 VPPPLPPTPPQPARRQSRRSPASPSPASPGPASPSPVSLSNPAQVDLGAATAEGGAPEAI 678
Query: 390 --LRSLPGLPPATAP 402
+ + P +PP P
Sbjct: 679 SGVPTPPAIPPQPRP 693
Score = 30.4 bits (67), Expect = 4.5
Identities = 37/152 (24%), Positives = 55/152 (36%), Gaps = 11/152 (7%)
Query: 269 VPFPPPRPSAELEESPPSADPFLETLTRLVRALRVPPARASAPRLALDPDALAGFPQGLV 328
VP P P+ +P A T+ VPP R ++P++ P P+
Sbjct: 504 VPTPATTPAPAPAPAPAPAPALASAATKERTESEVPP-RPASPKVTRSP------PETAA 556
Query: 329 NLSDPAALERLLDGEEPLLLLLRPTAATTGDPAPLHDPTSAPWAT--ALARRVAAELQAA 386
+ D A + P + + + + + PAP P S T AL RR+ A
Sbjct: 557 PVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQALPRRLVGSSLRA 616
Query: 387 AAELRSLPGLPPATAPLLARL--LALCPGGPG 416
LP PP A +R + P PG
Sbjct: 617 PTVPPPLPPTPPQPARRQSRRSPASPSPASPG 648
>gi|4502427 bone morphogenetic protein 7 precursor [Homo sapiens]
Length = 431
Score = 40.0 bits (92), Expect = 0.006
Identities = 29/102 (28%), Positives = 40/102 (39%), Gaps = 5/102 (4%)
Query: 462 CALRELSV---DLRAERSVLIPETYQANNCQGVCGWPQSDRNPRYGNHVVLLLKMQARGA 518
C EL V DL + ++ PE Y A C+G C +P + NH ++ +
Sbjct: 330 CKKHELYVSFRDLGWQDWIIAPEGYAAYYCEGECAFPLNSYM-NATNHAIVQTLVHFINP 388
Query: 519 ALARPPCCVPTAY-AGKLLISLSEERISAHHVPNMVATECGC 559
PCC PT A +L + NMV CGC
Sbjct: 389 ETVPKPCCAPTQLNAISVLYFDDSSNVILKKYRNMVVRACGC 430
>gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo
sapiens]
Length = 493
Score = 40.0 bits (92), Expect = 0.006
Identities = 43/146 (29%), Positives = 55/146 (37%), Gaps = 24/146 (16%)
Query: 262 AHGQLDTVPFPPPRPSAELEESPPSADPFLETLTRLVRALRVPPARASAPRLALDPDALA 321
A P PPP P A P+A+P L ++ A + A A+A A A A
Sbjct: 59 AQSPFQAAPAPPPTPQA------PAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAA 112
Query: 322 GFPQGLVNLSDPAALERLLDGEEPLLLLLRPTAATTGDPAPLHDPTSAPWATALARRVAA 381
+ D AAL++ P A P P P SAP A A AA
Sbjct: 113 PPAPAAASTVDTAALKQ-------------PPA-----PPPPPPPVSAPAAEAAPPASAA 154
Query: 382 ELQAAAAELRSLPGLPPATAPLLARL 407
+ AAAA P A AP+ + L
Sbjct: 155 TIAAAAATAVVAPTSTVAVAPVASAL 180
>gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo
sapiens]
Length = 477
Score = 40.0 bits (92), Expect = 0.006
Identities = 43/146 (29%), Positives = 55/146 (37%), Gaps = 24/146 (16%)
Query: 262 AHGQLDTVPFPPPRPSAELEESPPSADPFLETLTRLVRALRVPPARASAPRLALDPDALA 321
A P PPP P A P+A+P L ++ A + A A+A A A A
Sbjct: 59 AQSPFQAAPAPPPTPQA------PAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAA 112
Query: 322 GFPQGLVNLSDPAALERLLDGEEPLLLLLRPTAATTGDPAPLHDPTSAPWATALARRVAA 381
+ D AAL++ P A P P P SAP A A AA
Sbjct: 113 PPAPAAASTVDTAALKQ-------------PPA-----PPPPPPPVSAPAAEAAPPASAA 154
Query: 382 ELQAAAAELRSLPGLPPATAPLLARL 407
+ AAAA P A AP+ + L
Sbjct: 155 TIAAAAATAVVAPTSTVAVAPVASAL 180
>gi|153792495 growth differentiation factor 15 [Homo sapiens]
Length = 308
Score = 39.7 bits (91), Expect = 0.007
Identities = 35/132 (26%), Positives = 50/132 (37%), Gaps = 10/132 (7%)
Query: 434 LRVEWRGRDPRGPGRAQRSAGATAADGP---CALRELSV---DLRAERSVLIPETYQANN 487
L + R + RG RA+ G GP C L + DL VL P Q
Sbjct: 180 LELHLRPQAARGRRRARARNGDHCPLGPGRCCRLHTVRASLEDLGWADWVLSPREVQVTM 239
Query: 488 CQGVCGWPQSDRNPRYGNHVVLLLKMQARGAALARPPCCVPTAYAGKLLISLSEERISAH 547
C G C P R H + + PCCVP +Y +LI ++ +S
Sbjct: 240 CIGAC--PSQFRAANM--HAQIKTSLHRLKPDTVPAPCCVPASYNPMVLIQKTDTGVSLQ 295
Query: 548 HVPNMVATECGC 559
+++A +C C
Sbjct: 296 TYDDLLAKDCHC 307
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.426
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,554,407
Number of Sequences: 37866
Number of extensions: 1696693
Number of successful extensions: 8320
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 311
Number of HSP's that attempted gapping in prelim test: 7598
Number of HSP's gapped (non-prelim): 937
length of query: 560
length of database: 18,247,518
effective HSP length: 107
effective length of query: 453
effective length of database: 14,195,856
effective search space: 6430722768
effective search space used: 6430722768
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.