Search of human proteins with 11037061

Search of human proteins with 11037061

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|11037061 hypothetical protein LOC56683 [Homo sapiens]
         (290 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|11037061 hypothetical protein LOC56683 [Homo sapiens]              584   e-167
gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]     37   0.016
gi|224591408 SH2 domain containing 4B isoform 2 [Homo sapiens]         36   0.035
gi|224591406 SH2 domain containing 4B isoform 1 [Homo sapiens]         36   0.035
gi|169210488 PREDICTED: similar to M-phase phosphoprotein 10 (U3...    34   0.17 
gi|122891870 melanoma inhibitory activity family, member 3 [Homo...    33   0.22 
gi|226497734 RNA binding motif protein 19 [Homo sapiens]               33   0.29 
gi|226497654 RNA binding motif protein 19 [Homo sapiens]               33   0.29 
gi|226497574 RNA binding motif protein 19 [Homo sapiens]               33   0.29 
gi|169210281 PREDICTED: similar to M-phase phosphoprotein 10 (U3...    33   0.29 
gi|169210051 PREDICTED: similar to M-phase phosphoprotein 10 (U3...    33   0.29 
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s...    31   1.1  
gi|154354979 myosin X [Homo sapiens]                                   31   1.5  
gi|115495445 ankyrin repeat domain 30A [Homo sapiens]                  30   1.9  
gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]         30   2.5  
gi|116235456 ring finger protein 214 [Homo sapiens]                    30   2.5  
gi|116235451 ring finger protein 214 [Homo sapiens]                    30   2.5  
gi|24497519 mannosidase, alpha, class 1A, member 1 [Homo sapiens]      30   3.2  
gi|31317305 M-phase phosphoprotein 10 [Homo sapiens]                   30   3.2  
gi|239756104 PREDICTED: tetratricopeptide repeat domain 6 [Homo ...    29   5.5  
gi|239750633 PREDICTED: tetratricopeptide repeat domain 6 [Homo ...    29   5.5  
gi|239744942 PREDICTED: chromosome 14 open reading frame 25 [Hom...    29   5.5  
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap...    28   7.2  
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap...    28   7.2  
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap...    28   7.2  
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi...    28   7.2  
gi|34916000 FERM domain containing 7 [Homo sapiens]                    28   7.2  
gi|84043967 REV1-like isoform 2 [Homo sapiens]                         28   7.2  
gi|7706681 REV1-like isoform 1 [Homo sapiens]                          28   7.2  
gi|5454102 transforming, acidic coiled-coil containing protein 3...    28   7.2  

>gi|11037061 hypothetical protein LOC56683 [Homo sapiens]
          Length = 290

 Score =  584 bits (1505), Expect = e-167
 Identities = 290/290 (100%), Positives = 290/290 (100%)

Query: 1   MVLLHVKRGDESQFLLQAPGSTELEELTVQVARVYNGRLKVQRLCSEMEELAEHGIFLPP 60
           MVLLHVKRGDESQFLLQAPGSTELEELTVQVARVYNGRLKVQRLCSEMEELAEHGIFLPP
Sbjct: 1   MVLLHVKRGDESQFLLQAPGSTELEELTVQVARVYNGRLKVQRLCSEMEELAEHGIFLPP 60

Query: 61  NMQGLTDDQIEELKLKDEWGEKCVPSGGAVFKKDDIGRRNGQAPNEKMKQVLKKTIEEAK 120
           NMQGLTDDQIEELKLKDEWGEKCVPSGGAVFKKDDIGRRNGQAPNEKMKQVLKKTIEEAK
Sbjct: 61  NMQGLTDDQIEELKLKDEWGEKCVPSGGAVFKKDDIGRRNGQAPNEKMKQVLKKTIEEAK 120

Query: 121 AIISKKQVEAGVCVTMEMVKDALDQLRGAVMIVYPMGLPPYDPIRMEFENKEDLSGTQAG 180
           AIISKKQVEAGVCVTMEMVKDALDQLRGAVMIVYPMGLPPYDPIRMEFENKEDLSGTQAG
Sbjct: 121 AIISKKQVEAGVCVTMEMVKDALDQLRGAVMIVYPMGLPPYDPIRMEFENKEDLSGTQAG 180

Query: 181 LNVIKEAEAQLWWAAKELRRTKKLSDYVGKNEKTKIIAKIQQRGQGAPAREPIISSEEQK 240
           LNVIKEAEAQLWWAAKELRRTKKLSDYVGKNEKTKIIAKIQQRGQGAPAREPIISSEEQK
Sbjct: 181 LNVIKEAEAQLWWAAKELRRTKKLSDYVGKNEKTKIIAKIQQRGQGAPAREPIISSEEQK 240

Query: 241 QLMLYYHRRQEELKRLEENDDDAYLNSPWADNTALKRHFHGVKDIKWRPR 290
           QLMLYYHRRQEELKRLEENDDDAYLNSPWADNTALKRHFHGVKDIKWRPR
Sbjct: 241 QLMLYYHRRQEELKRLEENDDDAYLNSPWADNTALKRHFHGVKDIKWRPR 290


>gi|190194412 thyroid hormone receptor interactor 11 [Homo sapiens]
          Length = 1979

 Score = 37.4 bits (85), Expect = 0.016
 Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 3/117 (2%)

Query: 171  KEDLSG--TQAGLNVIKEAEAQLWWAAKELRRTKKLSDYVGKNEKTKIIAKIQQRGQGAP 228
            K DLS   T+  +  IKE E ++    ++     K  D + K+E  K+   IQQ+     
Sbjct: 1010 KHDLSKAETERLVKGIKERELEIKLLNEKNISLTKQIDQLSKDEVGKLTQIIQQKDLEIQ 1069

Query: 229  AREPIISSEEQKQLMLYYHRRQEELKRLEENDDDAYLNSPWADNTALKRHFHGVKDI 285
            A    ISS    Q ++Y  ++Q +   +E     A LN    +N+ LK  +H + DI
Sbjct: 1070 ALHARISSTSHTQDVVYL-QQQLQAYAMEREKVFAVLNEKTRENSHLKTEYHKMMDI 1125


>gi|224591408 SH2 domain containing 4B isoform 2 [Homo sapiens]
          Length = 309

 Score = 36.2 bits (82), Expect = 0.035
 Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 20/104 (19%)

Query: 157 GLPPYDPIRMEFENKEDLSGTQAGLNVIKEAEAQLWWAAKELRRTKKLSDYVGKNEKTKI 216
           G  PY+ I       E+L   +A L   +EAE    W  KE   TKK  D +  NEK +I
Sbjct: 39  GDKPYEEI------SEELIAERARLQAQREAEEL--WRQKEAEITKKFRDALA-NEKARI 89

Query: 217 IAKIQQRGQGAPAREPIISSEEQKQLMLYYHRRQEELKRLEEND 260
           +A+  +           +  E++K   +   R  EE KR EE +
Sbjct: 90  LAEKWK-----------VEMEDRKAAKVLEERIHEEFKRKEEEE 122


>gi|224591406 SH2 domain containing 4B isoform 1 [Homo sapiens]
          Length = 357

 Score = 36.2 bits (82), Expect = 0.035
 Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 20/104 (19%)

Query: 157 GLPPYDPIRMEFENKEDLSGTQAGLNVIKEAEAQLWWAAKELRRTKKLSDYVGKNEKTKI 216
           G  PY+ I       E+L   +A L   +EAE    W  KE   TKK  D +  NEK +I
Sbjct: 88  GDKPYEEI------SEELIAERARLQAQREAEEL--WRQKEAEITKKFRDALA-NEKARI 138

Query: 217 IAKIQQRGQGAPAREPIISSEEQKQLMLYYHRRQEELKRLEEND 260
           +A+  +           +  E++K   +   R  EE KR EE +
Sbjct: 139 LAEKWK-----------VEMEDRKAAKVLEERIHEEFKRKEEEE 171


>gi|169210488 PREDICTED: similar to M-phase phosphoprotein 10 (U3
           small nucleolar ribonucleoprotein) [Homo sapiens]
          Length = 213

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 6/82 (7%)

Query: 197 ELRRTKKLSDYVGKNE----KTKIIAKIQQRGQGAPAREPIISSE--EQKQLMLYYHRRQ 250
           ELR++   SD     +    K +  +K+Q  G G P  + II  +  +  ++  Y   R+
Sbjct: 81  ELRKSPVFSDEDSDLDFDISKLEQQSKVQNTGHGKPREKSIIDEKFFQLSEMEAYLENRE 140

Query: 251 EELKRLEENDDDAYLNSPWADN 272
           +E +R ++NDD++  +S   +N
Sbjct: 141 KEEERKDDNDDESVKSSRNVNN 162


>gi|122891870 melanoma inhibitory activity family, member 3 [Homo
            sapiens]
          Length = 1907

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 22/174 (12%)

Query: 93   KDDIGRRNGQAPNEKMKQVLKKTIEEAKAIISKKQVEAGVCVTMEMVKDALDQLRGAVMI 152
            KD + +   Q  +EK+K ++K+  E  + + + +Q        ++  K  + + R   MI
Sbjct: 1205 KDRVYQVTEQQISEKLKTIMKENTELVQKLSNYEQ-------KIKESKKHVQETRKQNMI 1257

Query: 153  VYPMGLPPYDPIRMEFENKEDLSGTQAGLNVIKEAEAQLWWAAKEL-----RRTKKLSDY 207
            +    +   D I+   +N+E L  T   L V+ E+E +     ++L     +  +KL D 
Sbjct: 1258 LSDEAIKYKDKIKTLEKNQEILDDTAKNLRVMLESEREQNVKNQDLISENKKSIEKLKDV 1317

Query: 208  VGKNEKTKIIAKIQQRGQGAPAREPIISSEEQKQLMLYYHRRQEELKRLEENDD 261
            +  N      +++Q     A   E  + SE         HR QEE  RL++  +
Sbjct: 1318 ISMNASE--FSEVQIALNEAKLSEEKVKSE--------CHRVQEENARLKKKKE 1361


>gi|226497734 RNA binding motif protein 19 [Homo sapiens]
          Length = 960

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 15/93 (16%)

Query: 69  QIEELKLKDEWGEKCVPSGGAVFKKDDIGRRNGQAPNEKMKQVLKKTIEEAKAIISKKQV 128
           ++EE + ++E  E+ +P G  +F K+     N     EK+K+V  K        ISKK+ 
Sbjct: 712 KMEEEEEEEEEEEESLP-GCTLFIKN----LNFDTTEEKLKEVFSKVGTVKSCSISKKKN 766

Query: 129 EAGVCVTM----------EMVKDALDQLRGAVM 151
           +AGV ++M          E  + AL QL+G V+
Sbjct: 767 KAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVV 799


>gi|226497654 RNA binding motif protein 19 [Homo sapiens]
          Length = 960

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 15/93 (16%)

Query: 69  QIEELKLKDEWGEKCVPSGGAVFKKDDIGRRNGQAPNEKMKQVLKKTIEEAKAIISKKQV 128
           ++EE + ++E  E+ +P G  +F K+     N     EK+K+V  K        ISKK+ 
Sbjct: 712 KMEEEEEEEEEEEESLP-GCTLFIKN----LNFDTTEEKLKEVFSKVGTVKSCSISKKKN 766

Query: 129 EAGVCVTM----------EMVKDALDQLRGAVM 151
           +AGV ++M          E  + AL QL+G V+
Sbjct: 767 KAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVV 799


>gi|226497574 RNA binding motif protein 19 [Homo sapiens]
          Length = 960

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 15/93 (16%)

Query: 69  QIEELKLKDEWGEKCVPSGGAVFKKDDIGRRNGQAPNEKMKQVLKKTIEEAKAIISKKQV 128
           ++EE + ++E  E+ +P G  +F K+     N     EK+K+V  K        ISKK+ 
Sbjct: 712 KMEEEEEEEEEEEESLP-GCTLFIKN----LNFDTTEEKLKEVFSKVGTVKSCSISKKKN 766

Query: 129 EAGVCVTM----------EMVKDALDQLRGAVM 151
           +AGV ++M          E  + AL QL+G V+
Sbjct: 767 KAGVLLSMGFGFVEYRKPEQAQKALKQLQGHVV 799


>gi|169210281 PREDICTED: similar to M-phase phosphoprotein 10 (U3
           small nucleolar ribonucleoprotein) [Homo sapiens]
          Length = 213

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 6/82 (7%)

Query: 197 ELRRTKKLSDYVGKNE----KTKIIAKIQQRGQGAPAREPIISSE--EQKQLMLYYHRRQ 250
           ELR++   SD     +    K +  +K+Q  G G P  + II  +  +  ++  Y   R+
Sbjct: 81  ELRKSPVFSDEDSDLDFDISKLEQQSKVQNTGHGKPREKSIIDEKFFQLSEMEAYLENRE 140

Query: 251 EELKRLEENDDDAYLNSPWADN 272
           +E +R ++NDD++  +S   +N
Sbjct: 141 KEEERKDDNDDESGKSSRNVNN 162


>gi|169210051 PREDICTED: similar to M-phase phosphoprotein 10 (U3
           small nucleolar ribonucleoprotein) [Homo sapiens]
          Length = 213

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 6/82 (7%)

Query: 197 ELRRTKKLSDYVGKNE----KTKIIAKIQQRGQGAPAREPIISSE--EQKQLMLYYHRRQ 250
           ELR++   SD     +    K +  +K+Q  G G P  + II  +  +  ++  Y   R+
Sbjct: 81  ELRKSPVFSDEDSDLDFDISKLEQQSKVQNTGHGKPREKSIIDEKFFQLSEMEAYLENRE 140

Query: 251 EELKRLEENDDDAYLNSPWADN 272
           +E +R ++NDD++  +S   +N
Sbjct: 141 KEEERKDDNDDESGKSSRNVNN 162


>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
            sapiens]
          Length = 1935

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 44/244 (18%), Positives = 95/244 (38%), Gaps = 52/244 (21%)

Query: 23   ELEELTVQVARVYNGRLKVQRLCSEME-ELAEHGIFLPPNMQGLTDDQIEELKLKDEWGE 81
            EL+++T  + ++   +  ++++C  +E ++ EH        + + D   +  KL+ E GE
Sbjct: 1227 ELDDVTSNMEQIIKAKANLEKMCRTLEDQMNEHRSKAEETQRSVNDLTSQRAKLQTENGE 1286

Query: 82   KCVPSGGAVFKKDDIGRRNGQAPNEKMKQVLKKTIEEAKAIISKKQVEAGVCVTMEMVKD 141
                                          L + ++E +A+IS  Q+  G     + ++D
Sbjct: 1287 ------------------------------LSRQLDEKEALIS--QLTRGKLTYTQQLED 1314

Query: 142  ALDQL------RGAVMIVYPMGLPPYDPIRMEFENKEDLSGTQAGLNVIKEAEAQLW--- 192
               QL      + A+           D +R ++E + +       +     +E   W   
Sbjct: 1315 LKRQLEEEVKAKNALAHALQSARHDCDLLREQYEEETEAKAELQRVLSKANSEVAQWRTK 1374

Query: 193  WAAKELRRTKKLSDYVGKNEKTKIIAKIQQRGQGAPAREPIISSEEQKQLMLYYHRRQEE 252
            +    ++RT++L +      K K+  ++Q+  +   A     SS E+ +     HR Q E
Sbjct: 1375 YETDAIQRTEELEE-----AKKKLAQRLQEAEEAVEAVNAKCSSLEKTK-----HRLQNE 1424

Query: 253  LKRL 256
            ++ L
Sbjct: 1425 IEDL 1428


>gi|154354979 myosin X [Homo sapiens]
          Length = 2058

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 25/101 (24%), Positives = 49/101 (48%), Gaps = 7/101 (6%)

Query: 165 RMEFENKEDLSGTQAGLNVIKEAEAQLWWAAKELRRTKKLSDYVGKNEKTKIIAKIQQRG 224
           R E E + +    +A L   +E E +     + L++++K ++   + EK K   ++++  
Sbjct: 832 REEEERERERERREAELRAQQEEETRKQQELEALQKSQKEAELTRELEKQKENKQVEEIL 891

Query: 225 QGAPAREPIISSEEQKQLML-------YYHRRQEELKRLEE 258
           +     E +   +EQ++L L          RR +EL+RLEE
Sbjct: 892 RLEKEIEDLQRMKEQQELSLTEASLQKLQERRDQELRRLEE 932


>gi|115495445 ankyrin repeat domain 30A [Homo sapiens]
          Length = 1341

 Score = 30.4 bits (67), Expect = 1.9
 Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 25/177 (14%)

Query: 69   QIEELKLKDEWGEKCVPSGGAVFKKDDIGRRNGQAPNEKMKQVLKKTIEE-AKAIISKKQ 127
            Q+E  K+K E  E C  S      +++  RRN    NEK+++ L +  E+  K +  K+Q
Sbjct: 956  QLENQKVKWEQ-ELC--SVRLTLNQEEEKRRNADILNEKIREELGRIEEQHRKELEVKQQ 1012

Query: 128  VEAGVCVT---MEMVKDALDQ-----------LRGAVMIVYPMGLPPYDPIRMEFENKED 173
            +E  + +    ++ V+  L+Q           L    M+   + +   +   ++ + +E 
Sbjct: 1013 LEQALRIQDIELKSVESNLNQVSHTHENENYLLHENCMLKKEIAMLKLEIATLKHQYQEK 1072

Query: 174  LSGTQAGLNVIKE--AEAQLWWAAKELRRTKKLSDYVGK-----NEKTKIIAKIQQR 223
             +     + ++KE  AE Q+    KE   TK+ S Y G+      E T + +K++++
Sbjct: 1073 ENKYFEDIKILKEKNAELQMTLKLKEESLTKRASQYSGQLKVLIAENTMLTSKLKEK 1129


>gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]
          Length = 1317

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 40/184 (21%), Positives = 80/184 (43%), Gaps = 11/184 (5%)

Query: 106 EKMKQVLKKTIEE-AKAIISKKQVEAGVCVTMEMVKDALDQLRGAVMIVYPMGLPPYDPI 164
           +++ Q+ K+  E+ AK  + KK++E      + +V    +QLR    ++    L     +
Sbjct: 728 QELDQLQKEKDEQYAKLELEKKRLEEQEKEQVMLVAHLEEQLREKQEMIQ---LLRRGEV 784

Query: 165 RMEFENKEDLSGTQAGLNVIKEAEAQLWWAAKELRRTKKLSDYVGKNEKTKIIAKIQQRG 224
           +   E K DL G +  L  +KEA A      +EL + +       + +  K++   +   
Sbjct: 785 QWVEEEKRDLEGIRESLLRVKEARAGGDEDGEELEKAQLRFFEFKRRQLVKLVNLEKDLV 844

Query: 225 QGAPAREPIISSEEQKQLMLYYHRRQEELKRLEENDDDAYLNSPWADNTALKRHFHGVKD 284
           Q     +  +  EEQ+ L        +E + LE++D+         D T + + F  +K 
Sbjct: 845 QQKDILKKEV-QEEQEILECLKCEHDKESRLLEKHDESV------TDVTEVPQDFEKIKP 897

Query: 285 IKWR 288
           +++R
Sbjct: 898 VEYR 901


>gi|116235456 ring finger protein 214 [Homo sapiens]
          Length = 703

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 32/180 (17%), Positives = 76/180 (42%), Gaps = 8/180 (4%)

Query: 83  CVPSGGAVFKKDDIGRRNGQAPNEKMKQVLKKTIEEAKAIISKKQVEAGVCVTMEMVKDA 142
           C+   G+     D+    G+  +  +++ L       KA    KQ+ +  C   +  + +
Sbjct: 99  CLSGSGSQSDLKDVASTAGEEGDTSLRESLHPVTRSLKAGCHTKQLASRNCSEEKSPQTS 158

Query: 143 L--DQLRGAVMIVYPMGLPP--YDPIRMEFENKEDLSGTQAGLNVIKEAEAQLWWAAKEL 198
           +  +  R   +   P+  P    + +R++ ++ +D S  +   N+  + + +   A  E+
Sbjct: 159 ILKEGNRDTSLDFRPVVSPANGVEGVRVDQDDDQDSSSLKLSQNIAVQTDFKT--ADSEV 216

Query: 199 RRTKKLSDYVGKNEKTKIIAKIQQRGQGAPAREPIISSEEQKQLMLYYHRRQEELKRLEE 258
              + +   + K    + + K  +R Q    ++  + ++ Q QL     RR+EE+K  +E
Sbjct: 217 NTDQDIEKNLDKMMTERTLLK--ERYQEVLDKQRQVENQLQVQLKQLQQRREEEMKNHQE 274


>gi|116235451 ring finger protein 214 [Homo sapiens]
          Length = 703

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 32/180 (17%), Positives = 76/180 (42%), Gaps = 8/180 (4%)

Query: 83  CVPSGGAVFKKDDIGRRNGQAPNEKMKQVLKKTIEEAKAIISKKQVEAGVCVTMEMVKDA 142
           C+   G+     D+    G+  +  +++ L       KA    KQ+ +  C   +  + +
Sbjct: 99  CLSGSGSQSDLKDVASTAGEEGDTSLRESLHPVTRSLKAGCHTKQLASRNCSEEKSPQTS 158

Query: 143 L--DQLRGAVMIVYPMGLPP--YDPIRMEFENKEDLSGTQAGLNVIKEAEAQLWWAAKEL 198
           +  +  R   +   P+  P    + +R++ ++ +D S  +   N+  + + +   A  E+
Sbjct: 159 ILKEGNRDTSLDFRPVVSPANGVEGVRVDQDDDQDSSSLKLSQNIAVQTDFKT--ADSEV 216

Query: 199 RRTKKLSDYVGKNEKTKIIAKIQQRGQGAPAREPIISSEEQKQLMLYYHRRQEELKRLEE 258
              + +   + K    + + K  +R Q    ++  + ++ Q QL     RR+EE+K  +E
Sbjct: 217 NTDQDIEKNLDKMMTERTLLK--ERYQEVLDKQRQVENQLQVQLKQLQQRREEEMKNHQE 274


>gi|24497519 mannosidase, alpha, class 1A, member 1 [Homo sapiens]
          Length = 653

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 14/107 (13%)

Query: 107 KMKQVLKKTIEEAKAIISKKQVEAGVCVTMEMVKDALDQLRGAVMIVYPMGLPPYD---P 163
           ++++  ++ + EAK  + K   E    + +E  K A DQLR         GLPP D   P
Sbjct: 123 RIRENHERALREAKETLQKLPEEIQRDILLEKKKVAQDQLRDKAPF---RGLPPVDFVPP 179

Query: 164 IRMEFENKEDLSGTQAGLNVIKEAEAQLW-------WAAKELRRTKK 203
           I +E     D +  +     IKE     W       W   EL+   K
Sbjct: 180 IGVESREPADAAIREKRAK-IKEMMKHAWNNYKGYAWGLNELKPISK 225


>gi|31317305 M-phase phosphoprotein 10 [Homo sapiens]
          Length = 681

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 12/47 (25%), Positives = 28/47 (59%), Gaps = 2/47 (4%)

Query: 218 AKIQQRGQGAPAREPIISSE--EQKQLMLYYHRRQEELKRLEENDDD 262
           +K+Q +GQG P  + I+  +  +  ++  Y    ++E +R ++ND++
Sbjct: 184 SKVQNKGQGKPREKSIVDDKFFKLSEMEAYLENIEKEEERKDDNDEE 230


>gi|239756104 PREDICTED: tetratricopeptide repeat domain 6 [Homo
           sapiens]
          Length = 1614

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 9/82 (10%)

Query: 190 QLWWAAK--ELRRTKKLSDYVGKNEKTKIIAKIQQRGQGAPAREPII---SSEEQKQLML 244
           Q W++A+  +LRR K   D      K KIIA ++ +     + + ++   + E ++QL L
Sbjct: 650 QKWFSAQPTQLRRVKSSVDL----RKEKIIAPLEIKNDMQSSIKEVMFQKAKELKRQLQL 705

Query: 245 YYHRRQEELKRLEENDDDAYLN 266
               + EE   ++E+ DD + N
Sbjct: 706 TKQNKTEEPNYVKESIDDIFDN 727


>gi|239750633 PREDICTED: tetratricopeptide repeat domain 6 [Homo
           sapiens]
          Length = 1614

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 9/82 (10%)

Query: 190 QLWWAAK--ELRRTKKLSDYVGKNEKTKIIAKIQQRGQGAPAREPII---SSEEQKQLML 244
           Q W++A+  +LRR K   D      K KIIA ++ +     + + ++   + E ++QL L
Sbjct: 650 QKWFSAQPTQLRRVKSSVDL----RKEKIIAPLEIKNDMQSSIKEVMFQKAKELKRQLQL 705

Query: 245 YYHRRQEELKRLEENDDDAYLN 266
               + EE   ++E+ DD + N
Sbjct: 706 TKQNKTEEPNYVKESIDDIFDN 727


>gi|239744942 PREDICTED: chromosome 14 open reading frame 25 [Homo
           sapiens]
          Length = 1614

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 9/82 (10%)

Query: 190 QLWWAAK--ELRRTKKLSDYVGKNEKTKIIAKIQQRGQGAPAREPII---SSEEQKQLML 244
           Q W++A+  +LRR K   D      K KIIA ++ +     + + ++   + E ++QL L
Sbjct: 650 QKWFSAQPTQLRRVKSSVDL----RKEKIIAPLEIKNDMQSSIKEVMFQKAKELKRQLQL 705

Query: 245 YYHRRQEELKRLEENDDDAYLN 266
               + EE   ++E+ DD + N
Sbjct: 706 TKQNKTEEPNYVKESIDDIFDN 727


>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
           sapiens]
          Length = 1293

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 22/101 (21%), Positives = 47/101 (46%), Gaps = 4/101 (3%)

Query: 165 RMEFENKEDLSGTQAGLNVIKEAEAQLWWAAKELRRTKKLSDYVGKNEKTKIIAKIQQRG 224
           R+E   +E+    +    + K+ E    WA +E    ++L +   + E+    A+++   
Sbjct: 816 RLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEA--ARLRHEE 873

Query: 225 QGAPAREPIISSEEQKQLMLYYHRRQEELKRLEENDDDAYL 265
           +    +E  +  + QK+LM    ++QE L+RL++      L
Sbjct: 874 EERKRKE--LEVQRQKELMRQRQQQQEALRRLQQQQQQQQL 912


>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo
           sapiens]
          Length = 1320

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 22/101 (21%), Positives = 47/101 (46%), Gaps = 4/101 (3%)

Query: 165 RMEFENKEDLSGTQAGLNVIKEAEAQLWWAAKELRRTKKLSDYVGKNEKTKIIAKIQQRG 224
           R+E   +E+    +    + K+ E    WA +E    ++L +   + E+    A+++   
Sbjct: 843 RLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEA--ARLRHEE 900

Query: 225 QGAPAREPIISSEEQKQLMLYYHRRQEELKRLEENDDDAYL 265
           +    +E  +  + QK+LM    ++QE L+RL++      L
Sbjct: 901 EERKRKE--LEVQRQKELMRQRQQQQEALRRLQQQQQQQQL 939


>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo
           sapiens]
          Length = 1299

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 22/101 (21%), Positives = 47/101 (46%), Gaps = 4/101 (3%)

Query: 165 RMEFENKEDLSGTQAGLNVIKEAEAQLWWAAKELRRTKKLSDYVGKNEKTKIIAKIQQRG 224
           R+E   +E+    +    + K+ E    WA +E    ++L +   + E+    A+++   
Sbjct: 822 RLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEA--ARLRHEE 879

Query: 225 QGAPAREPIISSEEQKQLMLYYHRRQEELKRLEENDDDAYL 265
           +    +E  +  + QK+LM    ++QE L+RL++      L
Sbjct: 880 EERKRKE--LEVQRQKELMRQRQQQQEALRRLQQQQQQQQL 918


>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo
           sapiens]
          Length = 1299

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 22/101 (21%), Positives = 47/101 (46%), Gaps = 4/101 (3%)

Query: 165 RMEFENKEDLSGTQAGLNVIKEAEAQLWWAAKELRRTKKLSDYVGKNEKTKIIAKIQQRG 224
           R+E   +E+    +    + K+ E    WA +E    ++L +   + E+    A+++   
Sbjct: 822 RLEERRREEEERRKQEELLRKQEEEAAKWAREEEEAQRRLEENRLRMEEEA--ARLRHEE 879

Query: 225 QGAPAREPIISSEEQKQLMLYYHRRQEELKRLEENDDDAYL 265
           +    +E  +  + QK+LM    ++QE L+RL++      L
Sbjct: 880 EERKRKE--LEVQRQKELMRQRQQQQEALRRLQQQQQQQQL 918


>gi|34916000 FERM domain containing 7 [Homo sapiens]
          Length = 714

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 13/23 (56%), Positives = 18/23 (78%), Gaps = 1/23 (4%)

Query: 255 RLEENDDDAYLNSPWA-DNTALK 276
           +L+E D+DAY N+P A D T+LK
Sbjct: 685 QLDEEDEDAYFNTPTAEDRTSLK 707


>gi|84043967 REV1-like isoform 2 [Homo sapiens]
          Length = 1250

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 7/97 (7%)

Query: 134 VTMEMVKDALDQLRGAVMIVYPMGLPPYDPIRMEFENKEDLSGTQAGLNVI--KEAEAQL 191
           +TM  ++       G ++  +  GL    P+R E E K   +    G+     KEAEA L
Sbjct: 673 MTMAKLQKEFGPKTGQMLYRFCRGLDDR-PVRTEKERKSVSAEINYGIRFTQPKEAEAFL 731

Query: 192 WWAAKELRRTKKLSDYVGKNEKTKIIAKIQQRGQGAP 228
              ++E++R  + +   GK    ++  KI  R  GAP
Sbjct: 732 LSLSEEIQRRLEATGMKGK----RLTLKIMVRKPGAP 764


>gi|7706681 REV1-like isoform 1 [Homo sapiens]
          Length = 1251

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 7/97 (7%)

Query: 134 VTMEMVKDALDQLRGAVMIVYPMGLPPYDPIRMEFENKEDLSGTQAGLNVI--KEAEAQL 191
           +TM  ++       G ++  +  GL    P+R E E K   +    G+     KEAEA L
Sbjct: 674 MTMAKLQKEFGPKTGQMLYRFCRGLDDR-PVRTEKERKSVSAEINYGIRFTQPKEAEAFL 732

Query: 192 WWAAKELRRTKKLSDYVGKNEKTKIIAKIQQRGQGAP 228
              ++E++R  + +   GK    ++  KI  R  GAP
Sbjct: 733 LSLSEEIQRRLEATGMKGK----RLTLKIMVRKPGAP 765


>gi|5454102 transforming, acidic coiled-coil containing protein 3
           [Homo sapiens]
          Length = 838

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 11/113 (9%)

Query: 172 EDLSGTQAGLNVIKEA-EAQLWWAAKELRRTKKLSDYVGKNEKTKIIAKIQQRGQGAPAR 230
           E+L G    L  I +  E  ++ A +E+++ K+LS    K E  K++ +  Q      + 
Sbjct: 663 EELHGKNLELGKIMDRFEEVVYQAMEEVQKQKELS----KAEIQKVLKEKDQLTTDLNSM 718

Query: 231 EPIISS-----EEQKQLMLYYHRRQEELKRLEENDDDAYLNSPWADNTALKRH 278
           E   S      E+QK+++  Y + +E LK+  E D  A +        ALK H
Sbjct: 719 EKSFSDLFKRFEKQKEVIEGYRKNEESLKKCVE-DYLARITQEGQRYQALKAH 770


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.133    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,327,822
Number of Sequences: 37866
Number of extensions: 492150
Number of successful extensions: 1412
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 1393
Number of HSP's gapped (non-prelim): 52
length of query: 290
length of database: 18,247,518
effective HSP length: 101
effective length of query: 189
effective length of database: 14,423,052
effective search space: 2725956828
effective search space used: 2725956828
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.