Search of human proteins with 110349756

Search of human proteins with 110349756

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|110349756 zygin 2 isoform 2 [Homo sapiens]
         (380 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|110349756 zygin 2 isoform 2 [Homo sapiens]                         757   0.0  
gi|110349754 zygin 2 isoform 1 [Homo sapiens]                         688   0.0  
gi|4826724 zygin 1 isoform 1 [Homo sapiens]                           314   7e-86
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [...    45   1e-04
gi|32880208 diaphanous homolog 3 isoform b [Homo sapiens]              43   5e-04
gi|110225351 diaphanous homolog 3 isoform a [Homo sapiens]             43   5e-04
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ...    42   0.001
gi|94721330 RUN and FYVE domain-containing 1 isoform b [Homo sap...    41   0.002
gi|94721332 RUN and FYVE domain-containing 1 isoform b [Homo sap...    41   0.002
gi|94721336 RUN and FYVE domain-containing 1 isoform a [Homo sap...    41   0.002
gi|214010165 rab11-family interacting protein 3 isoform 2 [Homo ...    41   0.002
gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo sa...    41   0.002
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]         41   0.002
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]         41   0.002
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]         41   0.002
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]         41   0.002
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]         41   0.002
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]         41   0.002
gi|122937227 U2-associated SR140 protein [Homo sapiens]                41   0.002
gi|71061468 centromere protein E [Homo sapiens]                        40   0.003
gi|38570058 hypothetical protein LOC80129 [Homo sapiens]               39   0.006
gi|4505257 moesin [Homo sapiens]                                       39   0.006
gi|33188443 microfilament and actin filament cross-linker protei...    39   0.006
gi|33188445 microfilament and actin filament cross-linker protei...    39   0.006
gi|188497667 trafficking protein, kinesin binding 2 [Homo sapiens]     39   0.006
gi|13376429 hypothetical protein LOC80011 [Homo sapiens]               39   0.008
gi|29171755 PTPRF interacting protein alpha 2 [Homo sapiens]           39   0.008
gi|19924131 RAD50 homolog isoform 2 [Homo sapiens]                     39   0.010
gi|19924129 RAD50 homolog isoform 1 [Homo sapiens]                     39   0.010
gi|169218106 PREDICTED: hypothetical protein, partial [Homo sapi...    39   0.010

>gi|110349756 zygin 2 isoform 2 [Homo sapiens]
          Length = 380

 Score =  757 bits (1955), Expect = 0.0
 Identities = 380/380 (100%), Positives = 380/380 (100%)

Query: 1   MAADGDWQDFYEFQEPARSLLDQENCNASPEPGAEAGAEAGGGADGFPAPACSLEEKLSL 60
           MAADGDWQDFYEFQEPARSLLDQENCNASPEPGAEAGAEAGGGADGFPAPACSLEEKLSL
Sbjct: 1   MAADGDWQDFYEFQEPARSLLDQENCNASPEPGAEAGAEAGGGADGFPAPACSLEEKLSL 60

Query: 61  CFRPSDPGAEPPRTAVRPITERSLLQGDEIWNALTDNYGNVMPVDWKSSHTRTLHLLTLN 120
           CFRPSDPGAEPPRTAVRPITERSLLQGDEIWNALTDNYGNVMPVDWKSSHTRTLHLLTLN
Sbjct: 61  CFRPSDPGAEPPRTAVRPITERSLLQGDEIWNALTDNYGNVMPVDWKSSHTRTLHLLTLN 120

Query: 121 LSEKGVSDSLLFDTSDDEELREQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPE 180
           LSEKGVSDSLLFDTSDDEELREQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPE
Sbjct: 121 LSEKGVSDSLLFDTSDDEELREQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPE 180

Query: 181 DDETPTQSDRLSMLSQEIQTLKRSSTGSYEERVKRLSVSELNEILEEIETAIKEYSEELV 240
           DDETPTQSDRLSMLSQEIQTLKRSSTGSYEERVKRLSVSELNEILEEIETAIKEYSEELV
Sbjct: 181 DDETPTQSDRLSMLSQEIQTLKRSSTGSYEERVKRLSVSELNEILEEIETAIKEYSEELV 240

Query: 241 QQLALRDELEFEKEVKNSFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMPG 300
           QQLALRDELEFEKEVKNSFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMPG
Sbjct: 241 QQLALRDELEFEKEVKNSFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMPG 300

Query: 301 TRFSMEGISNVIQNGLRHTFGNSGGEKQYLTTVIPYEKKNGPPSVEDLQILTKILRAMKE 360
           TRFSMEGISNVIQNGLRHTFGNSGGEKQYLTTVIPYEKKNGPPSVEDLQILTKILRAMKE
Sbjct: 301 TRFSMEGISNVIQNGLRHTFGNSGGEKQYLTTVIPYEKKNGPPSVEDLQILTKILRAMKE 360

Query: 361 DSEKVPSLLTDYILKVLCPT 380
           DSEKVPSLLTDYILKVLCPT
Sbjct: 361 DSEKVPSLLTDYILKVLCPT 380


>gi|110349754 zygin 2 isoform 1 [Homo sapiens]
          Length = 353

 Score =  688 bits (1776), Expect = 0.0
 Identities = 353/380 (92%), Positives = 353/380 (92%), Gaps = 27/380 (7%)

Query: 1   MAADGDWQDFYEFQEPARSLLDQENCNASPEPGAEAGAEAGGGADGFPAPACSLEEKLSL 60
           MAADGDWQDFYEFQEPARSLLDQENCNASPEPGAEAGAEAGGGADGFPAPACSLEEKLSL
Sbjct: 1   MAADGDWQDFYEFQEPARSLLDQENCNASPEPGAEAGAEAGGGADGFPAPACSLEEKLSL 60

Query: 61  CFRPSDPGAEPPRTAVRPITERSLLQGDEIWNALTDNYGNVMPVDWKSSHTRTLHLLTLN 120
           CFRPSDPGAEPPRTAVRPITERSLLQGDEIWNALTDNYGNVMPVDWKSSHTRTLHLLTLN
Sbjct: 61  CFRPSDPGAEPPRTAVRPITERSLLQGDEIWNALTDNYGNVMPVDWKSSHTRTLHLLTLN 120

Query: 121 LSEKGVSDSLLFDTSDDEELREQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPE 180
           LSEKGVSDSLLFDTSDDEELREQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPE
Sbjct: 121 LSEKGVSDSLLFDTSDDEELREQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPE 180

Query: 181 DDETPTQSDRLSMLSQEIQTLKRSSTGSYEERVKRLSVSELNEILEEIETAIKEYSEELV 240
           DDETPTQSDRLSMLSQEIQTLKRSSTGSYEERVKRLSVSELNEILEEIETAIKEYSEELV
Sbjct: 181 DDETPTQSDRLSMLSQEIQTLKRSSTGSYEERVKRLSVSELNEILEEIETAIKEYSEELV 240

Query: 241 QQLALRDELEFEKEVKNSFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMPG 300
           QQLALRDELEFEKEVKNSFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMPG
Sbjct: 241 QQLALRDELEFEKEVKNSFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMPG 300

Query: 301 TRFSMEGISNVIQNGLRHTFGNSGGEKQYLTTVIPYEKKNGPPSVEDLQILTKILRAMKE 360
           T                           YLTTVIPYEKKNGPPSVEDLQILTKILRAMKE
Sbjct: 301 T---------------------------YLTTVIPYEKKNGPPSVEDLQILTKILRAMKE 333

Query: 361 DSEKVPSLLTDYILKVLCPT 380
           DSEKVPSLLTDYILKVLCPT
Sbjct: 334 DSEKVPSLLTDYILKVLCPT 353


>gi|4826724 zygin 1 isoform 1 [Homo sapiens]
          Length = 392

 Score =  314 bits (805), Expect = 7e-86
 Identities = 180/339 (53%), Positives = 234/339 (69%), Gaps = 26/339 (7%)

Query: 55  EEKLSLCFRPSDPGAE---PPRTAVRPITERSLLQGDEIWNALTDNYGNVMPVDWKSSHT 111
           +EKL++CFR  +   E   P +  ++   E   LQ +E+W+ALTDNY   +  DW+  + 
Sbjct: 67  DEKLNVCFRNYNAKTENLAPVKNQLQIQEEEETLQDEEVWDALTDNYIPSLSEDWRDPN- 125

Query: 112 RTLHLLTLNLSEKGVSDSLLFDTSDDEELREQLDMHSIIVSCVNDEPLFTADQVIEEIEE 171
             +  L  N S          DT   E+  E+ +  S   S +N+EPL TADQVIEEIEE
Sbjct: 126 --IEALNGNCS----------DTEIHEKEEEEFNEKSENDSGINEEPLLTADQVIEEIEE 173

Query: 172 MMQESPDPEDDET--------PTQSDRLSMLSQEIQTLKRSSTGSYE-ERVKRLSVSELN 222
           MMQ SPDPE++E          T S   S+L QE+Q L ++   ++  E ++ +S SEL 
Sbjct: 174 MMQNSPDPEEEEEVLEEEDGGETSSQADSVLLQEMQALTQTFNNNWSYEGLRHMSGSELT 233

Query: 223 EILEEIETAIKEYSEELVQQLALRDELEFEKEVKNSFISVLIEVQNKQKEHKETAKKKKK 282
           E+L+++E AI+++SEELVQQLA RDELEFEKEVKNSFI+VLIEVQNKQKE +E  KK++K
Sbjct: 234 ELLDQVEGAIRDFSEELVQQLARRDELEFEKEVKNSFITVLIEVQNKQKEQRELMKKRRK 293

Query: 283 LKNGSSQNGKNERSH-MPGTRFSMEGISNVIQNGLRHTFGNSGGEKQYLTTVIPYEKKNG 341
            K  S Q+ + E+ + MP  RFSMEGISN++Q+G+R TFG+SG +KQYL TVIPYEKK  
Sbjct: 294 EKGLSLQSSRIEKGNQMPLKRFSMEGISNILQSGIRQTFGSSGTDKQYLNTVIPYEKKAS 353

Query: 342 PPSVEDLQILTKILRAMKEDSEKVPSLLTDYILKVLCPT 380
           PPSVEDLQ+LT IL AMKED+EKVP+LLTDYILKVLCPT
Sbjct: 354 PPSVEDLQMLTNILFAMKEDNEKVPTLLTDYILKVLCPT 392


>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
            sapiens]
          Length = 1937

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 46/173 (26%), Positives = 86/173 (49%), Gaps = 29/173 (16%)

Query: 118  TLNLSEKG--VSDSLLFDTSDDEELREQLDMHSIIVSCVNDEPLFTAD--QVIEEIEEMM 173
            TL  +E+   +++  L D S+  +L     +H+   S +N +     D  Q+  E+EE++
Sbjct: 1694 TLEQTERSRKIAEQELLDASERVQL-----LHTQNTSLINTKKKLENDVSQLQSEVEEVI 1748

Query: 174  QESPDPEDDETPTQSDRLSMLSQEIQTLKRSSTGSYEERVKR---LSVSELNEILEEIET 230
            QES + E+      +D  +M+++E++  K   T ++ ER+K+    +V +L   L+E E 
Sbjct: 1749 QESRNAEEKAKKAITD-AAMMAEELK--KEQDTSAHLERMKKNLEQTVKDLQHRLDEAEQ 1805

Query: 231  AIKEYSEELVQQLALR-DELEFEKEVKNSFISVLIEVQNKQKEHKETAKKKKK 282
               +  ++ +Q+L  R  ELE              EV+N+QK + E  K  +K
Sbjct: 1806 LALKGGKKQIQKLEARVRELEG-------------EVENEQKRNAEAVKGLRK 1845


>gi|32880208 diaphanous homolog 3 isoform b [Homo sapiens]
          Length = 849

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 41/225 (18%)

Query: 105 DWKSSHTRT--LHLLTLNLSEKGVSDSLLFDTSDDEELREQLDMHSIIVSCVNDEPLFTA 162
           D KS+  +T  LH L + + E+   D L F   DD    E LD  S +     ++ L   
Sbjct: 609 DTKSADQKTTLLHFL-VEICEEKYPDILNF--VDD---LEPLDKASKVSVETLEKNLRQM 662

Query: 163 DQVIEEIEEMMQESPDPED--DETPTQSDR-----------LSMLSQEIQTLKRSSTGSY 209
            + ++++E+ ++  P PED  D+  T+  R           LS L + ++ L +S  G Y
Sbjct: 663 GRQLQQLEKELETFPPPEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEKLYQSIIGYY 722

Query: 210 EERVKRLSVSE---------------LNEILEEIETAIKEYSEELVQQLALRDELEFEKE 254
              VK++SV +               + E +++ E   KE    + ++LA R+ LE +++
Sbjct: 723 AIDVKKVSVEDFLTDLNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELAERERLERQQK 782

Query: 255 VKNSFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMP 299
            K      L+E++ +  E        + L++G++   + +R+ MP
Sbjct: 783 KKR-----LLEMKTEGDETGVMDNLLEALQSGAAFRDRRKRTPMP 822


>gi|110225351 diaphanous homolog 3 isoform a [Homo sapiens]
          Length = 1193

 Score = 42.7 bits (99), Expect = 5e-04
 Identities = 55/225 (24%), Positives = 103/225 (45%), Gaps = 41/225 (18%)

Query: 105  DWKSSHTRT--LHLLTLNLSEKGVSDSLLFDTSDDEELREQLDMHSIIVSCVNDEPLFTA 162
            D KS+  +T  LH L + + E+   D L F   DD    E LD  S +     ++ L   
Sbjct: 872  DTKSADQKTTLLHFL-VEICEEKYPDILNF--VDD---LEPLDKASKVSVETLEKNLRQM 925

Query: 163  DQVIEEIEEMMQESPDPED--DETPTQSDR-----------LSMLSQEIQTLKRSSTGSY 209
             + ++++E+ ++  P PED  D+  T+  R           LS L + ++ L +S  G Y
Sbjct: 926  GRQLQQLEKELETFPPPEDLHDKFVTKMSRFVISAKEQYETLSKLHENMEKLYQSIIGYY 985

Query: 210  EERVKRLSVSE---------------LNEILEEIETAIKEYSEELVQQLALRDELEFEKE 254
               VK++SV +               + E +++ E   KE    + ++LA R+ LE +++
Sbjct: 986  AIDVKKVSVEDFLTDLNNFRTTFMQAIKENIKKREAEEKEKRVRIAKELAERERLERQQK 1045

Query: 255  VKNSFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMP 299
             K      L+E++ +  E        + L++G++   + +R+ MP
Sbjct: 1046 KKR-----LLEMKTEGDETGVMDNLLEALQSGAAFRDRRKRTPMP 1085


>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
            sapiens]
          Length = 1983

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 23/151 (15%)

Query: 139  ELREQLDM-HSIIVSCVNDEPLFTAD--QVIEEIEEMMQESPDPEDDETPTQSDRLSMLS 195
            E  E+L++ HS     +N +    AD  Q+  E+EE  QE  + E+      +D  +M++
Sbjct: 1757 EATERLNLLHSQNTGLLNQKKKLEADLAQLSGEVEEAAQERREAEEKAKKAITDA-AMMA 1815

Query: 196  QEIQTLKRSSTGSYEERVKRL---SVSELNEILEEIETAIKEYSEELVQQLALR-DELEF 251
            +E++  K   T ++ ER+K+    +V EL   LEE E A     ++ VQ+L  +  ELE 
Sbjct: 1816 EELK--KEQDTSAHLERMKKTLEQTVRELQARLEEAEQAALRGGKKQVQKLEAKVRELEA 1873

Query: 252  EKEVKNSFISVLIEVQNKQKEHKETAKKKKK 282
            E + +             QK+H E  K  +K
Sbjct: 1874 ELDAE-------------QKKHAEALKGVRK 1891


>gi|94721330 RUN and FYVE domain-containing 1 isoform b [Homo
           sapiens]
          Length = 600

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 19/187 (10%)

Query: 140 LREQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPEDDETPTQSDRLSMLSQEIQ 199
           LR+QL+     V  +N + +F   Q  E   +   E+    + +T      +  + + +Q
Sbjct: 344 LRQQLEE----VKAINLQ-MFHKAQNAESSLQQKNEAITSFEGKTNQVMSSMKQMEERLQ 398

Query: 200 TLKRSSTGSYEERVKRLSVS----------ELNEILEEIETAIKEYSEELVQQLALRDEL 249
             +R+  G+ EER  +L             +L+++ E+  +  KE   E  Q+ AL+ EL
Sbjct: 399 HSERARQGA-EERSHKLQQELGGRIGALQLQLSQLHEQCSSLEKELKSEKEQRQALQREL 457

Query: 250 EFEKEVKNSFISVLIEVQNKQKEHKETAKKK---KKLKNGSSQNGKNERSHMPGTRFSME 306
           + EK+  +     L +V+  +KE +E   +K   +K+     Q  +    H+  ++  ME
Sbjct: 458 QHEKDTSSLLRMELQQVEGLKKELRELQDEKAELQKICEEQEQALQEMGLHLSQSKLKME 517

Query: 307 GISNVIQ 313
            I  V Q
Sbjct: 518 DIKEVNQ 524


>gi|94721332 RUN and FYVE domain-containing 1 isoform b [Homo
           sapiens]
          Length = 600

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 19/187 (10%)

Query: 140 LREQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPEDDETPTQSDRLSMLSQEIQ 199
           LR+QL+     V  +N + +F   Q  E   +   E+    + +T      +  + + +Q
Sbjct: 344 LRQQLEE----VKAINLQ-MFHKAQNAESSLQQKNEAITSFEGKTNQVMSSMKQMEERLQ 398

Query: 200 TLKRSSTGSYEERVKRLSVS----------ELNEILEEIETAIKEYSEELVQQLALRDEL 249
             +R+  G+ EER  +L             +L+++ E+  +  KE   E  Q+ AL+ EL
Sbjct: 399 HSERARQGA-EERSHKLQQELGGRIGALQLQLSQLHEQCSSLEKELKSEKEQRQALQREL 457

Query: 250 EFEKEVKNSFISVLIEVQNKQKEHKETAKKK---KKLKNGSSQNGKNERSHMPGTRFSME 306
           + EK+  +     L +V+  +KE +E   +K   +K+     Q  +    H+  ++  ME
Sbjct: 458 QHEKDTSSLLRMELQQVEGLKKELRELQDEKAELQKICEEQEQALQEMGLHLSQSKLKME 517

Query: 307 GISNVIQ 313
            I  V Q
Sbjct: 518 DIKEVNQ 524


>gi|94721336 RUN and FYVE domain-containing 1 isoform a [Homo
           sapiens]
          Length = 708

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 19/187 (10%)

Query: 140 LREQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPEDDETPTQSDRLSMLSQEIQ 199
           LR+QL+     V  +N + +F   Q  E   +   E+    + +T      +  + + +Q
Sbjct: 452 LRQQLEE----VKAINLQ-MFHKAQNAESSLQQKNEAITSFEGKTNQVMSSMKQMEERLQ 506

Query: 200 TLKRSSTGSYEERVKRLSVS----------ELNEILEEIETAIKEYSEELVQQLALRDEL 249
             +R+  G+ EER  +L             +L+++ E+  +  KE   E  Q+ AL+ EL
Sbjct: 507 HSERARQGA-EERSHKLQQELGGRIGALQLQLSQLHEQCSSLEKELKSEKEQRQALQREL 565

Query: 250 EFEKEVKNSFISVLIEVQNKQKEHKETAKKK---KKLKNGSSQNGKNERSHMPGTRFSME 306
           + EK+  +     L +V+  +KE +E   +K   +K+     Q  +    H+  ++  ME
Sbjct: 566 QHEKDTSSLLRMELQQVEGLKKELRELQDEKAELQKICEEQEQALQEMGLHLSQSKLKME 625

Query: 307 GISNVIQ 313
            I  V Q
Sbjct: 626 DIKEVNQ 632


>gi|214010165 rab11-family interacting protein 3 isoform 2 [Homo
           sapiens]
          Length = 460

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 8/159 (5%)

Query: 154 VNDEPLFTADQVIEEI---EEMMQESPDPEDDETPTQSDRLSMLSQEIQTLKRSSTGSYE 210
           + ++ L   + V+EE    +E++ +    +  E      RL  L +E   L RS T   +
Sbjct: 212 LKEQELRACEMVLEETRRQKELLCKMEREKSIEIENLQTRLQQLDEENSEL-RSCTPCLK 270

Query: 211 ERVKRLSVSELNEILEEIETAIKEYSEELVQQLALRDELEFEK---EVKNSFISVLIEVQ 267
             ++RL   E  ++L+EIE+     SEE   +  + D L  E+   +        LIE  
Sbjct: 271 ANIERLE-EEKQKLLDEIESLTLRLSEEQENKRRMGDRLSHERHQFQRDKEATQELIEDL 329

Query: 268 NKQKEHKETAKKKKKLKNGSSQNGKNERSHMPGTRFSME 306
            KQ EH +  K + + + G S +   +  H       +E
Sbjct: 330 RKQLEHLQLLKLEAEQRRGRSSSMGLQEYHSRARESELE 368


>gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo
           sapiens]
          Length = 756

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 39/159 (24%), Positives = 68/159 (42%), Gaps = 8/159 (5%)

Query: 154 VNDEPLFTADQVIEEI---EEMMQESPDPEDDETPTQSDRLSMLSQEIQTLKRSSTGSYE 210
           + ++ L   + V+EE    +E++ +    +  E      RL  L +E   L RS T   +
Sbjct: 508 LKEQELRACEMVLEETRRQKELLCKMEREKSIEIENLQTRLQQLDEENSEL-RSCTPCLK 566

Query: 211 ERVKRLSVSELNEILEEIETAIKEYSEELVQQLALRDELEFEK---EVKNSFISVLIEVQ 267
             ++RL   E  ++L+EIE+     SEE   +  + D L  E+   +        LIE  
Sbjct: 567 ANIERLE-EEKQKLLDEIESLTLRLSEEQENKRRMGDRLSHERHQFQRDKEATQELIEDL 625

Query: 268 NKQKEHKETAKKKKKLKNGSSQNGKNERSHMPGTRFSME 306
            KQ EH +  K + + + G S +   +  H       +E
Sbjct: 626 RKQLEHLQLLKLEAEQRRGRSSSMGLQEYHSRARESELE 664


>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
          Length = 983

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 50/231 (21%), Positives = 90/231 (38%), Gaps = 50/231 (21%)

Query: 138 EELREQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPEDDETPTQSDRLSMLSQE 197
           EE  E    +  ++  +N E  F  ++  E  EE+M+     +   T   SD       E
Sbjct: 577 EEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASD-------E 629

Query: 198 IQTLKRSSTGSYEERVKRLSVSELNEILEEIETAIKEYSEELVQQLALRDELEFEKEVKN 257
            + +K +     +E  K+  VSEL+++ +E +  +++Y +        R  LE   +V  
Sbjct: 630 AEDMKEAMNRMIDELNKQ--VSELSQLYKEAQAELEDYRK--------RKSLE---DVTA 676

Query: 258 SFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMPGTRFSMEGISNVIQNGLR 317
            +I            HK   +K  +L N S    ++  S M                  +
Sbjct: 677 EYI------------HKAEHEKLMQLTNVSRAKAEDALSEM------------------K 706

Query: 318 HTFGNSGGEKQYLTTVIPYEKKNGPPSVEDLQILTKILRAMKEDSEKVPSL 368
             +     E   L  ++  +K+N     E LQ++T +  A KE  EK+ +L
Sbjct: 707 SQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNL 757


>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
          Length = 972

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 50/231 (21%), Positives = 90/231 (38%), Gaps = 50/231 (21%)

Query: 138 EELREQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPEDDETPTQSDRLSMLSQE 197
           EE  E    +  ++  +N E  F  ++  E  EE+M+     +   T   SD       E
Sbjct: 566 EEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASD-------E 618

Query: 198 IQTLKRSSTGSYEERVKRLSVSELNEILEEIETAIKEYSEELVQQLALRDELEFEKEVKN 257
            + +K +     +E  K+  VSEL+++ +E +  +++Y +        R  LE   +V  
Sbjct: 619 AEDMKEAMNRMIDELNKQ--VSELSQLYKEAQAELEDYRK--------RKSLE---DVTA 665

Query: 258 SFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMPGTRFSMEGISNVIQNGLR 317
            +I            HK   +K  +L N S    ++  S M                  +
Sbjct: 666 EYI------------HKAEHEKLMQLTNVSRAKAEDALSEM------------------K 695

Query: 318 HTFGNSGGEKQYLTTVIPYEKKNGPPSVEDLQILTKILRAMKEDSEKVPSL 368
             +     E   L  ++  +K+N     E LQ++T +  A KE  EK+ +L
Sbjct: 696 SQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNL 746


>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
          Length = 951

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 50/231 (21%), Positives = 90/231 (38%), Gaps = 50/231 (21%)

Query: 138 EELREQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPEDDETPTQSDRLSMLSQE 197
           EE  E    +  ++  +N E  F  ++  E  EE+M+     +   T   SD       E
Sbjct: 545 EEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASD-------E 597

Query: 198 IQTLKRSSTGSYEERVKRLSVSELNEILEEIETAIKEYSEELVQQLALRDELEFEKEVKN 257
            + +K +     +E  K+  VSEL+++ +E +  +++Y +        R  LE   +V  
Sbjct: 598 AEDMKEAMNRMIDELNKQ--VSELSQLYKEAQAELEDYRK--------RKSLE---DVTA 644

Query: 258 SFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMPGTRFSMEGISNVIQNGLR 317
            +I            HK   +K  +L N S    ++  S M                  +
Sbjct: 645 EYI------------HKAEHEKLMQLTNVSRAKAEDALSEM------------------K 674

Query: 318 HTFGNSGGEKQYLTTVIPYEKKNGPPSVEDLQILTKILRAMKEDSEKVPSL 368
             +     E   L  ++  +K+N     E LQ++T +  A KE  EK+ +L
Sbjct: 675 SQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNL 725


>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
          Length = 980

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 50/231 (21%), Positives = 90/231 (38%), Gaps = 50/231 (21%)

Query: 138 EELREQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPEDDETPTQSDRLSMLSQE 197
           EE  E    +  ++  +N E  F  ++  E  EE+M+     +   T   SD       E
Sbjct: 574 EEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASD-------E 626

Query: 198 IQTLKRSSTGSYEERVKRLSVSELNEILEEIETAIKEYSEELVQQLALRDELEFEKEVKN 257
            + +K +     +E  K+  VSEL+++ +E +  +++Y +        R  LE   +V  
Sbjct: 627 AEDMKEAMNRMIDELNKQ--VSELSQLYKEAQAELEDYRK--------RKSLE---DVTA 673

Query: 258 SFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMPGTRFSMEGISNVIQNGLR 317
            +I            HK   +K  +L N S    ++  S M                  +
Sbjct: 674 EYI------------HKAEHEKLMQLTNVSRAKAEDALSEM------------------K 703

Query: 318 HTFGNSGGEKQYLTTVIPYEKKNGPPSVEDLQILTKILRAMKEDSEKVPSL 368
             +     E   L  ++  +K+N     E LQ++T +  A KE  EK+ +L
Sbjct: 704 SQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNL 754


>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
          Length = 980

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 50/231 (21%), Positives = 90/231 (38%), Gaps = 50/231 (21%)

Query: 138 EELREQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPEDDETPTQSDRLSMLSQE 197
           EE  E    +  ++  +N E  F  ++  E  EE+M+     +   T   SD       E
Sbjct: 574 EEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASD-------E 626

Query: 198 IQTLKRSSTGSYEERVKRLSVSELNEILEEIETAIKEYSEELVQQLALRDELEFEKEVKN 257
            + +K +     +E  K+  VSEL+++ +E +  +++Y +        R  LE   +V  
Sbjct: 627 AEDMKEAMNRMIDELNKQ--VSELSQLYKEAQAELEDYRK--------RKSLE---DVTA 673

Query: 258 SFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMPGTRFSMEGISNVIQNGLR 317
            +I            HK   +K  +L N S    ++  S M                  +
Sbjct: 674 EYI------------HKAEHEKLMQLTNVSRAKAEDALSEM------------------K 703

Query: 318 HTFGNSGGEKQYLTTVIPYEKKNGPPSVEDLQILTKILRAMKEDSEKVPSL 368
             +     E   L  ++  +K+N     E LQ++T +  A KE  EK+ +L
Sbjct: 704 SQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNL 754


>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
          Length = 980

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 50/231 (21%), Positives = 90/231 (38%), Gaps = 50/231 (21%)

Query: 138 EELREQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPEDDETPTQSDRLSMLSQE 197
           EE  E    +  ++  +N E  F  ++  E  EE+M+     +   T   SD       E
Sbjct: 574 EEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMKLKDTLKSQMTQEASD-------E 626

Query: 198 IQTLKRSSTGSYEERVKRLSVSELNEILEEIETAIKEYSEELVQQLALRDELEFEKEVKN 257
            + +K +     +E  K+  VSEL+++ +E +  +++Y +        R  LE   +V  
Sbjct: 627 AEDMKEAMNRMIDELNKQ--VSELSQLYKEAQAELEDYRK--------RKSLE---DVTA 673

Query: 258 SFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMPGTRFSMEGISNVIQNGLR 317
            +I            HK   +K  +L N S    ++  S M                  +
Sbjct: 674 EYI------------HKAEHEKLMQLTNVSRAKAEDALSEM------------------K 703

Query: 318 HTFGNSGGEKQYLTTVIPYEKKNGPPSVEDLQILTKILRAMKEDSEKVPSL 368
             +     E   L  ++  +K+N     E LQ++T +  A KE  EK+ +L
Sbjct: 704 SQYSKVLNELTQLKQLVDAQKENSVSITEHLQVITTLRTAAKEMEEKISNL 754


>gi|122937227 U2-associated SR140 protein [Homo sapiens]
          Length = 1029

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 39/162 (24%), Positives = 63/162 (38%), Gaps = 2/162 (1%)

Query: 142 EQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPEDDETPTQSDRLSMLSQEIQTL 201
           E +D   +    V        DQ  E  EE  Q   +  +DE  TQS +          +
Sbjct: 762 EAVDESELEAQAVTTSKWELFDQHEESEEEENQNQEEESEDEEDTQSSKSEEHHLYSNPI 821

Query: 202 KRSSTGSYEERVKRLSVSELNEILEEIETAIKEYSEELVQ-QLALRDELEFEKEVKNSFI 260
           K   T S   +   +S  E    L EIE  + ++ +EL   +   +    F+++V++   
Sbjct: 822 KEEMTESKFSKYSEMS-EEKRAKLREIELKVMKFQDELESGKRPKKPGQSFQEQVEHYRD 880

Query: 261 SVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNERSHMPGTR 302
            +L   + K+ E +    KK K K  S    K E+     TR
Sbjct: 881 KLLQREKEKELERERERDKKDKEKLESRSKDKKEKDECTPTR 922


>gi|71061468 centromere protein E [Homo sapiens]
          Length = 2701

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 53/227 (23%), Positives = 93/227 (40%), Gaps = 21/227 (9%)

Query: 138  EELREQLDMHSIIVSCVNDEPLFTAD---QVIEEIEEMMQESPDPEDDETPTQSDRLSML 194
            E+L+EQL+     +  V  E     +   Q +EE++ + QE  D +  +   Q +R   L
Sbjct: 890  EQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKTLTQEKDDLKQLQESLQIER-DQL 948

Query: 195  SQEIQTLKRSSTGSYEERVKRLSVSELNEILEEIETAIKEYSEELVQQLALRDELEFEKE 254
              +I      +  + E+   R ++  L +  E I T   + SEE+ + L +    E   E
Sbjct: 949  KSDIHDTVNMNIDTQEQ--LRNALESLKQHQETINTLKSKISEEVSRNLHME---ENTGE 1003

Query: 255  VKNSFISVLIEVQNKQK-EHKETAKKKKKLKNGSSQNGKNERSHMPGTRFSMEGISNVIQ 313
             K+ F   ++ +  KQ  E K T      +K+       NE        FS+    N +Q
Sbjct: 1004 TKDEFQQKMVGIDKKQDLEAKNTQTLTADVKD-------NEIIEQQRKIFSLIQEKNELQ 1056

Query: 314  NGLRHTFGNSGGEKQYLTTVIPYEKKNGPPSVEDLQILTKILRAMKE 360
              L         EK+ L T +    +    + E+L++L   L+  +E
Sbjct: 1057 QMLESVI----AEKEQLKTDLKENIEMTIENQEELRLLGDELKKQQE 1099



 Score = 35.8 bits (81), Expect = 0.066
 Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 3/134 (2%)

Query: 139  ELREQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPEDDETPTQSDRLSMLSQ-- 196
            ELR  L      +S +  +     D++  +I+E+ ++       +     ++++ L Q  
Sbjct: 1495 ELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQFNIKQISEVQEKVNELKQFK 1554

Query: 197  EIQTLKRSSTGSYEERVKRLSVSELNEILEEIETAIKEYSEELVQQLALRDELEFEKEVK 256
            E +  K S+  S E ++  L+ + L E  EEI+  IKE  E    Q AL+ E +  KE  
Sbjct: 1555 EHRKAKDSALQSIESKMLELT-NRLQESQEEIQIMIKEKEEMKRVQEALQIERDQLKENT 1613

Query: 257  NSFISVLIEVQNKQ 270
               ++ + E Q K+
Sbjct: 1614 KEIVAKMKESQEKE 1627



 Score = 34.3 bits (77), Expect = 0.19
 Identities = 35/160 (21%), Positives = 69/160 (43%), Gaps = 17/160 (10%)

Query: 127  SDSLLFDTSDDEELREQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPEDDETPT 186
            + +L  D  D+E + +Q  + S+I     +E     + VI E E++  +  +   + T  
Sbjct: 1026 TQTLTADVKDNEIIEQQRKIFSLIQE--KNELQQMLESVIAEKEQLKTDLKE-NIEMTIE 1082

Query: 187  QSDRLSMLSQEIQTLKRSSTGSYEERVKRLS-VSELNEILEEIETAIKEYSEELVQQLAL 245
              + L +L  E++  +          +K+   +S   + L E+E  +KE S++L      
Sbjct: 1083 NQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQL------ 1136

Query: 246  RDELEFEKEVKNSFISVLIEVQNKQKEHKETAKKKKKLKN 285
                   +E +   ++V  E+   QK+  E    K +LKN
Sbjct: 1137 -------QEKQQQLLNVQEEMSEMQKKINEIENLKNELKN 1169



 Score = 33.9 bits (76), Expect = 0.25
 Identities = 36/167 (21%), Positives = 76/167 (45%), Gaps = 14/167 (8%)

Query: 135  SDDEELREQLDMHSIIVSCVNDEPLFTADQVIEEIEEM---MQESPDPEDDETPTQSDRL 191
            S+ E+L++Q+   S+ +S +  E L  A ++ E +EEM   M+E  +    E   + +R 
Sbjct: 1847 SEMEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERD 1906

Query: 192  SMLSQEIQTLKRSSTGSYEERVKRLSVSELNEILEEIETAIKEYSEELVQQLALRDELEF 251
             +     +T  R      E +  R+   E  E ++++   I   SE+ +Q   ++ +L+ 
Sbjct: 1907 QLKESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKI---SEKTIQISDIQKDLDK 1963

Query: 252  EK--------EVKNSFISVLIEVQNKQKEHKETAKKKKKLKNGSSQN 290
             K        E++   + +L   ++    HK+  + ++  K   +QN
Sbjct: 1964 SKDELQKKIQELQKKELQLLRVKEDVNMSHKKINEMEQLKKQFEAQN 2010



 Score = 30.4 bits (67), Expect = 2.8
 Identities = 33/166 (19%), Positives = 71/166 (42%), Gaps = 10/166 (6%)

Query: 138  EELREQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPEDDETPTQSDRLSMLSQE 197
            ++L+E L   +I       E L      ++E +E + +      ++T   S+    L   
Sbjct: 1703 DQLKENL-RETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHS 1761

Query: 198  IQTLKRSSTGSYEE-RVKRLSVSELNEILEEIETAIKEYSEELVQQ--------LALRDE 248
               LK       EE R+  + + E  E ++++   + E +++L             L+++
Sbjct: 1762 NDALKAQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEK 1821

Query: 249  LEFEKEVKNSFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGKNE 294
            ++  K  ++  I++  +V   QK+  E  + KK++K+ S    K E
Sbjct: 1822 IQELKANEHQLITLKKDVNETQKKVSEMEQLKKQIKDQSLTLSKLE 1867



 Score = 30.0 bits (66), Expect = 3.6
 Identities = 25/103 (24%), Positives = 45/103 (43%)

Query: 190 RLSMLSQEIQTLKRSSTGSYEERVKRLSVSELNEILEEIETAIKEYSEELVQQLALRDEL 249
           +++ L +E+      +    EE +    +  L   +E +   I++ SEEL    + +D+L
Sbjct: 721 KITDLQKELNKEVEENEALREEVILLSELKSLPSEVERLRKEIQDKSEELHIITSEKDKL 780

Query: 250 EFEKEVKNSFISVLIEVQNKQKEHKETAKKKKKLKNGSSQNGK 292
             E   K S +  L+E   K K+   T +   K  +   QN K
Sbjct: 781 FSEVVHKESRVQGLLEEIGKTKDDLATTQSNYKSTDQEFQNFK 823



 Score = 29.6 bits (65), Expect = 4.7
 Identities = 29/160 (18%), Positives = 68/160 (42%), Gaps = 12/160 (7%)

Query: 138  EELREQLDMHSIIVSCVNDEPLFTADQVIEEIEEM---MQESPDPEDDETPTQSDRLSML 194
            E L+EQ +   + +  +  E +     + E +EEM    +E  D    E   + +R  + 
Sbjct: 1647 EHLKEQFETQKLNLENIETENIRLTQILHENLEEMRSVTKERDDLRSVEETLKVERDQLK 1706

Query: 195  SQEIQTLKRSSTGSYEERVKRLSVSELNEILEEIETAIKEYSEELVQQL--------ALR 246
                +T+ R      E ++  + + E  E ++++   + E + E+            AL+
Sbjct: 1707 ENLRETITRDLEKQEELKIVHMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHSNDALK 1766

Query: 247  -DELEFEKEVKNSFISVLIEVQNKQKEHKETAKKKKKLKN 285
              +L+ ++E++ + + +  + +   K     ++K  KL N
Sbjct: 1767 AQDLKIQEELRIAHMHLKEQQETIDKLRGIVSEKTDKLSN 1806


>gi|38570058 hypothetical protein LOC80129 [Homo sapiens]
          Length = 715

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 55/224 (24%), Positives = 99/224 (44%), Gaps = 26/224 (11%)

Query: 49  APACSLE-EKLSLCFRPSDPGAEPPRTAVRPITERSLLQGDEIWNALTDNYGNVMPVDWK 107
           A +C+ E EKL+     +    E     V+   ER LL G ++W+A       +     K
Sbjct: 246 AASCTEEKEKLNQDLLSAVEAKEALEREVKIFQER-LLAGQQVWDASKQEVSLLK----K 300

Query: 108 SSHTRTLHLLTLNLSEKGVSDSLLFDTSDDEELREQLDMHSIIVSCVNDEPLFTADQVIE 167
           SS         L  S K   D++    S     RE++   + ++         T D ++E
Sbjct: 301 SSSE-------LEKSLKASQDAVTTSQSQYFSFREKI---AALLRGRLSMTGSTEDTILE 350

Query: 168 EIEEMMQESPDPEDDETPTQSDRLSMLSQEIQTLKRSSTGSYEERVKRLSVSELNEILEE 227
           +I EM  +S +   D   +Q +  + +S+ ++ L + S G +++ ++R   +E   +LE 
Sbjct: 351 KIREM--DSREESRDRMVSQLE--AQISELVEQLGKES-GFHQKALQRAQKAE--NMLET 403

Query: 228 IETAIKEYSEELVQQLALRDELEFEKEVKNSFISVLIEVQNKQK 271
           ++  +     ELV    LRD L FEK+    ++  L ++  K K
Sbjct: 404 LQGQLTHLEAELVSGGVLRDNLNFEKQ---KYLKFLDQLSQKMK 444


>gi|4505257 moesin [Homo sapiens]
          Length = 577

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 38/146 (26%), Positives = 67/146 (45%), Gaps = 11/146 (7%)

Query: 149 IIVSCVNDEPLFTADQVIEEIEEMMQESPDPEDDETPTQSDRLSMLSQEIQTLKRSSTGS 208
           I+  C+ +  L+   +  + IE + Q      +++   Q +R +ML  E +  KR     
Sbjct: 280 ILALCMGNHELYMRRRKPDTIE-VQQMKAQAREEKHQKQMER-AMLENEKK--KREMAEK 335

Query: 209 YEERVKRLSVSELNEILEEIETAIKEYSEELVQQLALRDELEFEKEVKNSFISVLIEVQN 268
            +E+++R    EL E L++IE   K+  +EL +Q     ELE E++   S      E + 
Sbjct: 336 EKEKIER-EKEELMERLKQIEEQTKKAQQELEEQTRRALELEQERKRAQS------EAEK 388

Query: 269 KQKEHKETAKKKKKLKNGSSQNGKNE 294
             KE +E  + K+ L   S    K +
Sbjct: 389 LAKERQEAEEAKEALLQASRDQKKTQ 414


>gi|33188443 microfilament and actin filament cross-linker protein
            isoform b [Homo sapiens]
          Length = 5938

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 16/124 (12%)

Query: 161  TADQVIEEIEEMMQESPDPEDDETPTQSDRLSMLSQEIQTLKRSSTGSYEERVKRLSVSE 220
            T  Q +  +++   +  D +DD        +   +    T+ +   G  EE   +LS  E
Sbjct: 2079 TTQQDLSALQKNQSDLKDLQDD--------IQNRATSFATVVKDIEGFMEENQTKLSPRE 2130

Query: 221  LNEILEEIETAIKEYSEELVQQLALRDELEF-EKEVKNSFISVLIEVQNKQKEHKETAKK 279
            L  + E++  A ++Y        AL++E    +KE++ +  S L +   K K  KE A+ 
Sbjct: 2131 LTALREKLHQAKEQYE-------ALQEETRVAQKELEEAVTSALQQETEKSKAAKELAEN 2183

Query: 280  KKKL 283
            KKK+
Sbjct: 2184 KKKI 2187


>gi|33188445 microfilament and actin filament cross-linker protein
            isoform a [Homo sapiens]
          Length = 5430

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 16/124 (12%)

Query: 161  TADQVIEEIEEMMQESPDPEDDETPTQSDRLSMLSQEIQTLKRSSTGSYEERVKRLSVSE 220
            T  Q +  +++   +  D +DD        +   +    T+ +   G  EE   +LS  E
Sbjct: 1577 TTQQDLSALQKNQSDLKDLQDD--------IQNRATSFATVVKDIEGFMEENQTKLSPRE 1628

Query: 221  LNEILEEIETAIKEYSEELVQQLALRDELEF-EKEVKNSFISVLIEVQNKQKEHKETAKK 279
            L  + E++  A ++Y        AL++E    +KE++ +  S L +   K K  KE A+ 
Sbjct: 1629 LTALREKLHQAKEQYE-------ALQEETRVAQKELEEAVTSALQQETEKSKAAKELAEN 1681

Query: 280  KKKL 283
            KKK+
Sbjct: 1682 KKKI 1685


>gi|188497667 trafficking protein, kinesin binding 2 [Homo sapiens]
          Length = 914

 Score = 39.3 bits (90), Expect = 0.006
 Identities = 44/184 (23%), Positives = 87/184 (47%), Gaps = 29/184 (15%)

Query: 134 TSDDEELREQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPEDDETPTQSD---- 189
           +  +E L EQL      V+ +  E L   D+++  +    +ES       TP + +    
Sbjct: 144 SEQNESLEEQLGQAFDQVNQLQHE-LCKKDELLRIVSIASEESETDSSCSTPLRFNESFS 202

Query: 190 ------RLSMLSQEIQTLK-------------RSSTGSYEERVKRLSVSELNEILEEIET 230
                 +L ML ++++ L+             ++ T +YEE+ ++L VS+  + L E   
Sbjct: 203 LSQGLLQLEMLQEKLKELEEENMALRSKACHIKTETVTYEEKEQQL-VSDCVKELRETNA 261

Query: 231 AIKEYSEELVQQLALRDELEFEKEVKNSFISVLIEVQNKQKEHKETAKKKKKLKNGSSQN 290
            +   +EEL  +    DEL   +E  +S +S ++++Q+K KEH    K++ KL   +S++
Sbjct: 262 QMSRMTEELSGK---SDELIRYQEELSSLLSQIVDLQHKLKEH-VIEKEELKLHLQASKD 317

Query: 291 GKNE 294
            + +
Sbjct: 318 AQRQ 321


>gi|13376429 hypothetical protein LOC80011 [Homo sapiens]
          Length = 254

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 37/138 (26%), Positives = 64/138 (46%), Gaps = 11/138 (7%)

Query: 160 FTADQVIEEIEEMMQESPD----PED-DETPTQSDRLSMLSQEIQTLKRSSTGSYEERVK 214
           F ++  ++E  +  QE  +    PED +E P +      L + +Q  K      YEE+ K
Sbjct: 15  FVSEAELDERRKRRQEEWEKVRKPEDPEECPEEVYDPRSLYERLQEQKDRKQQEYEEQFK 74

Query: 215 RLSVSELNEILEEIETAIKEY---SEELVQQLALRDELEFEKEVKNSFISVLIEVQNKQK 271
                 +   L+E ET   +     +EL+++    +EL+  KE +N+   V I  +NK++
Sbjct: 75  ---FKNMVRGLDEDETNFLDEVSRQQELIEKQRREEELKELKEYRNNLKKVGISQENKKE 131

Query: 272 EHKETAKKKKKLKNGSSQ 289
             K+   K  + KN  SQ
Sbjct: 132 VEKKLTVKPIETKNKFSQ 149


>gi|29171755 PTPRF interacting protein alpha 2 [Homo sapiens]
          Length = 1257

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 4/151 (2%)

Query: 137 DEELREQLDMHSIIVSCVNDEPLFTADQVIEEIEEMMQESPDPEDDETPTQSDRLSMLS- 195
           DE++RE+L +    VS + +E      +++   E+ +         E  T+S+ L  +  
Sbjct: 188 DEKVRERLRVSLERVSALEEELAAANQEIVALREQNVHIQRKMASSEGSTESEHLEGMEP 247

Query: 196 -QEIQTLKRSSTGSYEERVKRLSVSELNEILEEIETAIKEYSEELVQQLALRDELEFEKE 254
            Q++   KR S GS +   +   + EL E+LE+    + +  E L    +   E+E E E
Sbjct: 248 GQKVHE-KRLSNGSIDSTDETSQIVELQELLEKQNYEMAQMKERLAALSSRVGEVEQEAE 306

Query: 255 VKNSFISVLIEVQNK-QKEHKETAKKKKKLK 284
                +    E+  K Q++ +E   +K+ ++
Sbjct: 307 TARKDLIKTEEMNTKYQRDIREAMAQKEDME 337


>gi|19924131 RAD50 homolog isoform 2 [Homo sapiens]
          Length = 1173

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 40/208 (19%), Positives = 89/208 (42%), Gaps = 34/208 (16%)

Query: 172 MMQESPDPEDDETPTQSDRLSMLSQEIQTLKRS--------STGSYEERVKRLSVSELNE 223
           M Q   D ++ E P   ++L  ++++IQ LK           T   EE   ++ ++++  
Sbjct: 596 MRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVT- 654

Query: 224 ILEEIETAIKEYSEELVQQLALRDELEFEKEVKNSFISVLIEVQNKQKEHK-ETAKKKKK 282
           I+E  +  +K+   ++ QQ A    ++ ++ V+       +  + ++K+HK +T   K +
Sbjct: 655 IMERFQMELKDVERKIAQQAAKLQGIDLDRTVQQ------VNQEKQEKQHKLDTVSSKIE 708

Query: 283 LKNGSSQNGKNERSHMPGTRFSMEGISNVIQNGLRHTFGNSGGEKQYLTTVIPYEKKNGP 342
           L     Q+ + +  H+  T   ++                   EK  ++T +   ++   
Sbjct: 709 LNRKLIQDQQEQIQHLKSTTNELK------------------SEKLQISTNLQRRQQLEE 750

Query: 343 PSVEDLQILTKILRAMKEDSEKVPSLLT 370
            +VE    +  + R +K+  E+V  L T
Sbjct: 751 QTVELSTEVQSLYREIKDAKEQVSPLET 778


>gi|19924129 RAD50 homolog isoform 1 [Homo sapiens]
          Length = 1312

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 40/208 (19%), Positives = 89/208 (42%), Gaps = 34/208 (16%)

Query: 172 MMQESPDPEDDETPTQSDRLSMLSQEIQTLKRS--------STGSYEERVKRLSVSELNE 223
           M Q   D ++ E P   ++L  ++++IQ LK           T   EE   ++ ++++  
Sbjct: 735 MRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTDVT- 793

Query: 224 ILEEIETAIKEYSEELVQQLALRDELEFEKEVKNSFISVLIEVQNKQKEHK-ETAKKKKK 282
           I+E  +  +K+   ++ QQ A    ++ ++ V+       +  + ++K+HK +T   K +
Sbjct: 794 IMERFQMELKDVERKIAQQAAKLQGIDLDRTVQQ------VNQEKQEKQHKLDTVSSKIE 847

Query: 283 LKNGSSQNGKNERSHMPGTRFSMEGISNVIQNGLRHTFGNSGGEKQYLTTVIPYEKKNGP 342
           L     Q+ + +  H+  T   ++                   EK  ++T +   ++   
Sbjct: 848 LNRKLIQDQQEQIQHLKSTTNELK------------------SEKLQISTNLQRRQQLEE 889

Query: 343 PSVEDLQILTKILRAMKEDSEKVPSLLT 370
            +VE    +  + R +K+  E+V  L T
Sbjct: 890 QTVELSTEVQSLYREIKDAKEQVSPLET 917


>gi|169218106 PREDICTED: hypothetical protein, partial [Homo
           sapiens]
          Length = 436

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 30/139 (21%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 163 DQVIEEIEEMMQESPDPEDDETPTQSDRLSMLSQEIQTLKRSSTGSYEERVKRL--SVSE 220
           +QV ++ E+M ++     + E   +     ML Q+ QT +   TG  EE+++     + E
Sbjct: 248 EQVQKQEEQMRKQEEQMREQEEQMREQEEQMLKQKEQTEQEEQTGEQEEQMREQEEQMRE 307

Query: 221 LNEILEEIETAIKEYSEEL----VQQLALRDELEFEKEVKNSFISVLIEVQNK-QKEHKE 275
             E + E E  ++E  E++     Q    ++++  +KE        + E + + QK+ ++
Sbjct: 308 QEEQMREQEEQMREQEEQMGKQEEQMWEQKEQMWEQKEQMWKQEEQMGEQEEQMQKQEEQ 367

Query: 276 TAKKKKKLKNGSSQNGKNE 294
             K++++++    Q  K E
Sbjct: 368 VRKQEEQMRKQEEQMRKQE 386


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.129    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,028,392
Number of Sequences: 37866
Number of extensions: 804213
Number of successful extensions: 4872
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 378
Number of HSP's that attempted gapping in prelim test: 4452
Number of HSP's gapped (non-prelim): 812
length of query: 380
length of database: 18,247,518
effective HSP length: 104
effective length of query: 276
effective length of database: 14,309,454
effective search space: 3949409304
effective search space used: 3949409304
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.