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Search of human proteins with 155722994
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens]
(948 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens] 1919 0.0
gi|125987603 cleavage and polyadenylation specific factor 4, 30k... 94 8e-19
gi|5729939 cleavage and polyadenylation specific factor 4, 30kDa... 92 2e-18
gi|193788659 cleavage and polyadenylation specific factor 4-like... 92 3e-18
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 64 7e-10
gi|47519675 microtubule-associated protein 4 isoform 2 [Homo sap... 57 8e-08
gi|197276602 microtubule-associated protein 4 isoform 5 [Homo sa... 55 2e-07
gi|32880199 makorin ring finger protein 2 [Homo sapiens] 55 4e-07
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 53 1e-06
gi|15812178 zinc finger protein 36, C3H type-like 2 [Homo sapiens] 52 2e-06
gi|197276600 microtubule-associated protein 4 isoform 4 [Homo sa... 52 3e-06
gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sap... 52 3e-06
gi|4507961 zinc finger protein 36, C3H type, homolog [Homo sapiens] 52 3e-06
gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens] 51 4e-06
gi|118766347 zinc finger CCCH-type domain containing 6 [Homo sap... 51 4e-06
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 50 1e-05
gi|150170699 kinesin family member 26A [Homo sapiens] 50 1e-05
gi|30315649 muscleblind-like 3 isoform R [Homo sapiens] 50 1e-05
gi|19387844 muscleblind-like 3 isoform G [Homo sapiens] 50 1e-05
gi|253970412 G-2 and S-phase expressed 1 [Homo sapiens] 47 6e-05
gi|46411180 muscleblind-like 2 isoform 3 [Homo sapiens] 47 6e-05
gi|21464125 muscleblind-like 2 isoform 1 [Homo sapiens] 47 6e-05
gi|237757310 synaptojanin 1 isoform a [Homo sapiens] 47 8e-05
gi|217416362 zinc finger CCCH-type containing 8 [Homo sapiens] 47 8e-05
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 47 8e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni... 47 1e-04
gi|46411174 muscleblind-like 1 isoform g [Homo sapiens] 46 1e-04
gi|46411172 muscleblind-like 1 isoform f [Homo sapiens] 46 1e-04
gi|46411170 muscleblind-like 1 isoform e [Homo sapiens] 46 1e-04
gi|46411168 muscleblind-like 1 isoform d [Homo sapiens] 46 1e-04
>gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens]
Length = 948
Score = 1919 bits (4972), Expect = 0.0
Identities = 948/948 (100%), Positives = 948/948 (100%)
Query: 1 MEEKEILRRQIRLLQGLIDDYKTLHGNAPAPGTPAASGWQPPTYHSGRAFSARYPRPSRR 60
MEEKEILRRQIRLLQGLIDDYKTLHGNAPAPGTPAASGWQPPTYHSGRAFSARYPRPSRR
Sbjct: 1 MEEKEILRRQIRLLQGLIDDYKTLHGNAPAPGTPAASGWQPPTYHSGRAFSARYPRPSRR 60
Query: 61 GYSSHHGPSWRKKYSLVNRPPGPSDPPADHAVRPLHGARGGQPPVPQQHVLERQVQLSQG 120
GYSSHHGPSWRKKYSLVNRPPGPSDPPADHAVRPLHGARGGQPPVPQQHVLERQVQLSQG
Sbjct: 61 GYSSHHGPSWRKKYSLVNRPPGPSDPPADHAVRPLHGARGGQPPVPQQHVLERQVQLSQG 120
Query: 121 QNVVIKVKPPSKSGSASASGAQRGSLEEFEETPWSDQRPREGEGEPPRGQLQPSRPTRAR 180
QNVVIKVKPPSKSGSASASGAQRGSLEEFEETPWSDQRPREGEGEPPRGQLQPSRPTRAR
Sbjct: 121 QNVVIKVKPPSKSGSASASGAQRGSLEEFEETPWSDQRPREGEGEPPRGQLQPSRPTRAR 180
Query: 181 GTCSVEDPLLVCQKEPGKPRMVKSVGSVGDSPREPRRTVSESVIAVKASFPSSALPPRTG 240
GTCSVEDPLLVCQKEPGKPRMVKSVGSVGDSPREPRRTVSESVIAVKASFPSSALPPRTG
Sbjct: 181 GTCSVEDPLLVCQKEPGKPRMVKSVGSVGDSPREPRRTVSESVIAVKASFPSSALPPRTG 240
Query: 241 VALGRKLGSHSVASCAPQLLGDRRVDAGHTDQPVPSGSVGGPARPASGPRQAREASLVVT 300
VALGRKLGSHSVASCAPQLLGDRRVDAGHTDQPVPSGSVGGPARPASGPRQAREASLVVT
Sbjct: 241 VALGRKLGSHSVASCAPQLLGDRRVDAGHTDQPVPSGSVGGPARPASGPRQAREASLVVT 300
Query: 301 CRTNKFRKNNYKWVAASSKSPRVARRALSPRVAAENVCKASAGMANKVEKPQLIADPEPK 360
CRTNKFRKNNYKWVAASSKSPRVARRALSPRVAAENVCKASAGMANKVEKPQLIADPEPK
Sbjct: 301 CRTNKFRKNNYKWVAASSKSPRVARRALSPRVAAENVCKASAGMANKVEKPQLIADPEPK 360
Query: 361 PRKPATSSKPGSAPSKYKWKASSPSASSSSSFRWQSEASSKDHASQLSPVLSRSPSGDRP 420
PRKPATSSKPGSAPSKYKWKASSPSASSSSSFRWQSEASSKDHASQLSPVLSRSPSGDRP
Sbjct: 361 PRKPATSSKPGSAPSKYKWKASSPSASSSSSFRWQSEASSKDHASQLSPVLSRSPSGDRP 420
Query: 421 AVGHSGLKPLSGETPLSAYKVKSRTKIIRRRSSTSLPGDKKSGTSPAATAKSHLSLRRRQ 480
AVGHSGLKPLSGETPLSAYKVKSRTKIIRRRSSTSLPGDKKSGTSPAATAKSHLSLRRRQ
Sbjct: 421 AVGHSGLKPLSGETPLSAYKVKSRTKIIRRRSSTSLPGDKKSGTSPAATAKSHLSLRRRQ 480
Query: 481 ALRGKSSPVLKKTPNKGLVQVTTHRLCRLPPSRAHLPTKEASSLHAVRTAPTSKVIKTRY 540
ALRGKSSPVLKKTPNKGLVQVTTHRLCRLPPSRAHLPTKEASSLHAVRTAPTSKVIKTRY
Sbjct: 481 ALRGKSSPVLKKTPNKGLVQVTTHRLCRLPPSRAHLPTKEASSLHAVRTAPTSKVIKTRY 540
Query: 541 RIVKKTPASPLSAPPFPLSLPSWRARRLSLSRSLVLNRLRPVASGGGKAQPGSPWWRSKG 600
RIVKKTPASPLSAPPFPLSLPSWRARRLSLSRSLVLNRLRPVASGGGKAQPGSPWWRSKG
Sbjct: 541 RIVKKTPASPLSAPPFPLSLPSWRARRLSLSRSLVLNRLRPVASGGGKAQPGSPWWRSKG 600
Query: 601 YRCIGGVLYKVSANKLSKTSGQPSDAGSRPLLRTGRLDPAGSCSRSLASRAVQRSLAIIR 660
YRCIGGVLYKVSANKLSKTSGQPSDAGSRPLLRTGRLDPAGSCSRSLASRAVQRSLAIIR
Sbjct: 601 YRCIGGVLYKVSANKLSKTSGQPSDAGSRPLLRTGRLDPAGSCSRSLASRAVQRSLAIIR 660
Query: 661 QARQRREKRKEYCMYYNRFGRCNRGERCPYIHDPEKVAVCTRFVRGTCKKTDGTCPFSHH 720
QARQRREKRKEYCMYYNRFGRCNRGERCPYIHDPEKVAVCTRFVRGTCKKTDGTCPFSHH
Sbjct: 661 QARQRREKRKEYCMYYNRFGRCNRGERCPYIHDPEKVAVCTRFVRGTCKKTDGTCPFSHH 720
Query: 721 VSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKGYCPLGAKCKKKHTLLCPD 780
VSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKGYCPLGAKCKKKHTLLCPD
Sbjct: 721 VSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKGYCPLGAKCKKKHTLLCPD 780
Query: 781 FARRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDATARSRVSASHGPRKPSASQRPT 840
FARRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDATARSRVSASHGPRKPSASQRPT
Sbjct: 781 FARRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDATARSRVSASHGPRKPSASQRPT 840
Query: 841 RQTPSSAALTAAAVAAPPHCPGGSASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAA 900
RQTPSSAALTAAAVAAPPHCPGGSASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAA
Sbjct: 841 RQTPSSAALTAAAVAAPPHCPGGSASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAA 900
Query: 901 ACSNRLCKLPSFISLQSSPSPGAQPRVRAPRAPLTKDSGKPLHIKPRL 948
ACSNRLCKLPSFISLQSSPSPGAQPRVRAPRAPLTKDSGKPLHIKPRL
Sbjct: 901 ACSNRLCKLPSFISLQSSPSPGAQPRVRAPRAPLTKDSGKPLHIKPRL 948
>gi|125987603 cleavage and polyadenylation specific factor 4, 30kDa
isoform 2 [Homo sapiens]
Length = 244
Score = 93.6 bits (231), Expect = 8e-19
Identities = 49/146 (33%), Positives = 72/146 (49%), Gaps = 6/146 (4%)
Query: 682 CNRGERCPYIH-DPEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLK-GICSN 739
C +G CP+ H EK VC ++RG CKK D C F H KMP C ++ K G CSN
Sbjct: 49 CGKGGMCPFRHISGEKTVVCKHWLRGLCKKGD-QCEFLHEYDMTKMPECYFYSKFGECSN 107
Query: 740 SNCPYSHVYVSRKAEVCSDFLKGYCPLGAKCKKKHT--LLCPDFARRGACPRGAQCQLLH 797
CP+ H+ K + C + +G+C G C+ +HT ++C ++ G CP G C+ +H
Sbjct: 108 KECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNYL-VGFCPEGPSCKFMH 166
Query: 798 RTQKRHSRRAATSPAPGPSDATARSR 823
+ P P + A+ R
Sbjct: 167 PRFELPMGTTEQPPLPQQTQPPAKQR 192
Score = 43.5 bits (101), Expect = 0.001
Identities = 25/84 (29%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 721 VSKEKMPVCSYFLKGICSNSN-CPYSHVYVSRKAEVCSDFLKGYCPLGAKCKKKHTL--- 776
+ K VC +FLK C CP+ H+ K VC +L+G C G +C+ H
Sbjct: 33 MDKSGAAVCEFFLKAACGKGGMCPFRHI-SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMT 91
Query: 777 ---LCPDFARRGACPRGAQCQLLH 797
C +++ G C +C LH
Sbjct: 92 KMPECYFYSKFGEC-SNKECPFLH 114
>gi|5729939 cleavage and polyadenylation specific factor 4, 30kDa
isoform 1 [Homo sapiens]
Length = 269
Score = 92.0 bits (227), Expect = 2e-18
Identities = 45/120 (37%), Positives = 65/120 (54%), Gaps = 6/120 (5%)
Query: 682 CNRGERCPYIH-DPEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLK-GICSN 739
C +G CP+ H EK VC ++RG CKK D C F H KMP C ++ K G CSN
Sbjct: 49 CGKGGMCPFRHISGEKTVVCKHWLRGLCKKGD-QCEFLHEYDMTKMPECYFYSKFGECSN 107
Query: 740 SNCPYSHVYVSRKAEVCSDFLKGYCPLGAKCKKKHT--LLCPDFARRGACPRGAQCQLLH 797
CP+ H+ K + C + +G+C G C+ +HT ++C ++ G CP G C+ +H
Sbjct: 108 KECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNYL-VGFCPEGPSCKFMH 166
Score = 44.3 bits (103), Expect = 5e-04
Identities = 52/215 (24%), Positives = 74/215 (34%), Gaps = 34/215 (15%)
Query: 721 VSKEKMPVCSYFLKGICSNSN-CPYSHVYVSRKAEVCSDFLKGYCPLGAKCKKKHTL--- 776
+ K VC +FLK C CP+ H+ K VC +L+G C G +C+ H
Sbjct: 33 MDKSGAAVCEFFLKAACGKGGMCPFRHI-SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMT 91
Query: 777 ---LCPDFARRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDATARSRVSASHGPRKP 833
C +++ G C +C LH P D R HG P
Sbjct: 92 KMPECYFYSKFGEC-SNKECPFLH-----------IDPESKIKDCPWYDRGFCKHG---P 136
Query: 834 SASQRPTRQTPSSAALTAAAVAAPPHCP-GGSASPSSSKASSSSSSSSSPPASLDHEAPS 892
R TR+ L CP G S + ++ PP + P+
Sbjct: 137 LCRHRHTRRVICVNYLVG-------FCPEGPSCKFMHPRFELPMGTTEQPPLPQQTQPPA 189
Query: 893 LQEAALAAACSNRLCKLPSFISLQSSPSPGAQPRV 927
Q S+ L +L S SSP+ P+V
Sbjct: 190 KQSNNPPLQRSSSLIQL---TSQNSSPNQQRTPQV 221
>gi|193788659 cleavage and polyadenylation specific factor 4-like
[Homo sapiens]
Length = 179
Score = 91.7 bits (226), Expect = 3e-18
Identities = 47/133 (35%), Positives = 75/133 (56%), Gaps = 7/133 (5%)
Query: 673 CMYYNRFGRCNRGERCPYIHDP-EKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMPVCSY 731
C ++ + G C +G+ CP+ HD EK+ VC ++RG CKK D C F H +MP C +
Sbjct: 41 CNFFTK-GLCEKGKLCPFRHDRGEKMVVCKHWLRGLCKKGDH-CKFLHQYDLTRMPECYF 98
Query: 732 FLK-GICSNSNCPYSHVYVSRKAEVCSDFLKGYCPLGAKCKKKHT--LLCPDFARRGACP 788
+ K G CSN C + HV + K++ C + +G+C G CK +H ++C ++ G CP
Sbjct: 99 YSKFGDCSNKECSFLHVKPAFKSQDCPWYDQGFCKDGPLCKYRHVPRIMCLNYL-VGFCP 157
Query: 789 RGAQCQLLHRTQK 801
G +CQ + ++
Sbjct: 158 EGPKCQFAQKIRE 170
Score = 46.2 bits (108), Expect = 1e-04
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Query: 709 KKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSN-CPYSHVYVSRKAEVCSDFLKGYCPLG 767
+K G PF + K VC++F KG+C CP+ H K VC +L+G C G
Sbjct: 22 QKGTGLLPFQG-MDKSASAVCNFFTKGLCEKGKLCPFRHDR-GEKMVVCKHWLRGLCKKG 79
Query: 768 AKCKKKHTL------LCPDFARRGACPRGAQCQLLH 797
CK H C +++ G C +C LH
Sbjct: 80 DHCKFLHQYDLTRMPECYFYSKFGDC-SNKECSFLH 114
Score = 39.7 bits (91), Expect = 0.013
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 33/104 (31%)
Query: 669 RKEYCMYYNRFGRCNRGERCPYIHDPEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMPV 728
R C +Y++FG C+ E C ++H V+ K D
Sbjct: 92 RMPECYFYSKFGDCSNKE-CSFLH-----------VKPAFKSQD---------------- 123
Query: 729 CSYFLKGICSNSN-CPYSHVYVSRKAEVCSDFLKGYCPLGAKCK 771
C ++ +G C + C Y HV +C ++L G+CP G KC+
Sbjct: 124 CPWYDQGFCKDGPLCKYRHV----PRIMCLNYLVGFCPEGPKCQ 163
Score = 34.3 bits (77), Expect = 0.57
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 6/49 (12%)
Query: 755 VCSDFLKGYCPLGAKCKKKH-----TLLCPDFARRGACPRGAQCQLLHR 798
VC+ F KG C G C +H ++C + RG C +G C+ LH+
Sbjct: 40 VCNFFTKGLCEKGKLCPFRHDRGEKMVVCKHWL-RGLCKKGDHCKFLHQ 87
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 63.9 bits (154), Expect = 7e-10
Identities = 169/722 (23%), Positives = 252/722 (34%), Gaps = 102/722 (14%)
Query: 267 AGHTDQPVPSGSVGGPARPASGPRQAREASLVVTCRTNKFRKNNYKWVAASSKSPRVARR 326
A QP P P +P S R++ +S T + K +K + + S SPR R+
Sbjct: 157 AREAKQPAPE-----PPKPYSLVRES-SSSRSPTPKQKKKKKKKDRGRRSESSSPRRERK 210
Query: 327 ALSPRVAAENVCKASAGMANKVEKPQLIADPEPKPRKPATSSKPGSAPSKYKWKASSPSA 386
S + + + S ++ P+ + K RK + S+ P + S+ SA
Sbjct: 211 KSSKKKKHRSESE-SKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSA 269
Query: 387 SSSSSFRWQSE-ASSKDHASQL-----SPVLSRSPSGDRPAVGH---SGLKPLSGET--- 434
SSS + R +S A++K H + L SP R GD P S +P S ET
Sbjct: 270 SSSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATK 329
Query: 435 -PLSAYKVKSRTKIIRRRSSTS-LPGDKKSGTSPAATAKSHLSLRRRQALRGKSSPVLKK 492
P S Y+ K + K + +S+T P ++S T P A + L R G S L
Sbjct: 330 QPSSPYEDKDKDK--KEKSATRPSPSPERSSTGPEPPAPTPLLAERH----GGSPQPLAT 383
Query: 493 TPNKGLVQVTTHRLCRLPPSRAHLPTKEASSLHAVRTAPTSKVIKTRYRIVKKTPASPLS 552
TP L Q + P+R P K L ++ +S ++ + +SP S
Sbjct: 384 TP---LSQEPVNPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPES 440
Query: 553 APPFPL--------SLPS------WRARR-----LSLSRSLVLNRLRPVASGG------- 586
P P S P+ RA+R + SR + +R A G
Sbjct: 441 PKPAPAPGSHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTP 500
Query: 587 ---GKAQPGSPWWRSKGYRCIGGVLYKVSANKLSKTSGQPSDAGSRPLLRTGRLDPAG-- 641
G ++ SP WR G S++ +P + SR R GR A
Sbjct: 501 TKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRG 560
Query: 642 -SCSRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCNRGERCPYIHDPEKVAVC 700
S SRS A+R RS AR+ R + + +R R P
Sbjct: 561 RSHSRSPATRGRSRSRT---PARRGRSRSRTPARRRSR-------SRTP----------- 599
Query: 701 TRFVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFL 760
T +++ P S+ + P S + P SR S
Sbjct: 600 ------TRRRSRSRTPARRGRSRSRTPARRR------SRTRSPVRRRSRSRSPARRSGRS 647
Query: 761 KGYCPLGAKCKKKHTLLCPDFARRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDATA 820
+ P + T ARRG + R++ R R S + P +
Sbjct: 648 RSRTPARRGRSRSRTP-----ARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRS 702
Query: 821 RSRVSASHGPRKPSASQRPTRQTPSSAALTAAAVAAPPHCPGGSASPSSSKASSSSSSSS 880
RSR G QR R SS + + S S+ SS S S
Sbjct: 703 RSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSL 762
Query: 881 SPPASLDHEAPSLQEAALAAA-CSNRLCKLPSFISLQSSPSPGAQPRVRAPRAPLTKDSG 939
S P S SL+ + ++ C + + P S S P A+ R PR + S
Sbjct: 763 SSPRSKAKSRLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRT-PPRRSRSSSSP 821
Query: 940 KP 941
P
Sbjct: 822 PP 823
Score = 57.8 bits (138), Expect = 5e-08
Identities = 180/834 (21%), Positives = 284/834 (34%), Gaps = 102/834 (12%)
Query: 128 KPPSKSGSASASGAQRGSLEEFEETPWSDQRPREGEGEPPRGQLQPS---RPTRARGTCS 184
+PP S + R + ++ R R E PR + + S + R+
Sbjct: 166 EPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESK 225
Query: 185 VEDPLLVCQKEPGKPRMVKSVGSVGDSPREPRRTVSESVIAVKASFPSSALPPRTGVALG 244
K K + K S +P R S A AS SS +
Sbjct: 226 KRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSAS--SSDTSRSRSRSAA 283
Query: 245 RKLGSHSVASCAPQLLGDRRVDAGHTDQPVPSGSVGGPARPASGPRQAREASLVVTCRTN 304
K + ++A +P RR G D P RP+S ++ S + +
Sbjct: 284 AKTHTTALAGRSPSPASGRR---GEGDAPFSEPGTTSTQRPSSPETATKQPS---SPYED 337
Query: 305 KFRKNNYKWVAASSKSPRVARRALSPRVAAENVCKASAGMANKVEKPQLIADP--EPKPR 362
K + K S SP + P + + G + L +P P
Sbjct: 338 KDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPVNPPSEA 397
Query: 363 KPATSSKPGSAPSKYKWKASSPSASSSSSFRWQSEASSKDHASQLSPVLSRSPSGDRPAV 422
P P +P K +SS S+ S +++S S SP +PA
Sbjct: 398 SPTRDRSPPKSPEKLPQSSSSESSPPSPQ------------PTKVSRHASSSPESPKPAP 445
Query: 423 GHSGLKPLSGETPLSAYKVKSRTKIIRRRSSTSLPGDKKSGTSPAATAKSHLSLRRRQAL 482
+ +S +P S + R K R +S + P + + ATAK S R
Sbjct: 446 APGSHREISS-SPTSKNRSHGRAK--RDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTK 502
Query: 483 RGKS---SPVLKKTPNK---GLVQVTTHRLCRLPP-----SRAHLPTKEASSLHAVRTAP 531
RG S SP +++ + G + R P SR+ + S A R
Sbjct: 503 RGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRS 562
Query: 532 TSKVIKTRYRIVKKTPA----SPLSAPPFPLSLPSWRARRLSLSRSLVLN-RLRPVASGG 586
S+ TR R +TPA S P S RR S SR+ R R
Sbjct: 563 HSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPAR 622
Query: 587 GKAQPGSPWWRSKGYRCIGGVLYKVSANKLSKTSGQPSDAGSRPLLRTGRL---DPAGSC 643
+++ SP R R + S S+T + + SR R GR PA
Sbjct: 623 RRSRTRSPVRRRSRSRSPA----RRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRS 678
Query: 644 SRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCNRGERCPYIHDPEKVAVCTRF 703
RS + +R + R R+ R + + R GR + P++ R
Sbjct: 679 GRSRSRTPARRGRSRSRTPRRGRSRSRSLV----RRGRSHS-------RTPQR-----RG 722
Query: 704 VRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKGY 763
G+ + S S+ SNS+ +K+ + S +
Sbjct: 723 RSGSSSERKNKSRTSQRRSR--------------SNSSPEM------KKSRISSRRSRSL 762
Query: 764 CPLGAKCKKKHTLLCPDFARRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDATARSR 823
+K K + +L + CP+ +T R SR ++ P RSR
Sbjct: 763 SSPRSKAKSRLSLR-RSLSGSSPCPKQKS-----QTPPRRSRSGSSQPKAKSRTPPRRSR 816
Query: 824 VSASHGPRKPSASQRPTRQTPSSAALTAAAVAAPPHCPGGSASPSSSKASSS----SSSS 879
S+S P++ S + P+RQ+ SS++ + P G SP +++ S + S
Sbjct: 817 SSSSPPPKQKSKT--PSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRSCFE 874
Query: 880 SSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSSPSPGAQPRVRAPRAP 933
SSP L PS + + ++ P S S SP QP+V+A +P
Sbjct: 875 SSPDPELKSRTPS-RHSCSGSSPPRVKSSTPPRQSPSRSSSP--QPKVKAIISP 925
Score = 57.4 bits (137), Expect = 6e-08
Identities = 192/872 (22%), Positives = 294/872 (33%), Gaps = 133/872 (15%)
Query: 106 PQQHVLERQVQLSQGQNVVIKVKPPSKSGSASASGAQRGSLEEFEETPWSDQRPREGEGE 165
P + E+ + S + + K+G +S L+ TP ++ E
Sbjct: 1367 PSLDMKEQSTRSSGHSSSELSPDAVEKAGMSSNQSISSPVLDAVPRTPSRERSSSASSPE 1426
Query: 166 PPRGQLQ-PSRPTRARGTCSVEDPLLVCQKEPGKPRMVKSVGSVGDSPREPRRTVSESVI 224
G + PSR +R+ + + D P + + S + D PR P R SE
Sbjct: 1427 MKDGLPRTPSRRSRSGSSPGLRDG----SGTPSRHSLSGSSPGMKDIPRTPSRGRSEC-- 1480
Query: 225 AVKASFPSSALPPRTGVALGRKLGSHSVASCAPQLLGDRRVDAGHTDQ------PVPSGS 278
S P P+T R S + + +R DQ P+ S
Sbjct: 1481 ---DSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRS 1537
Query: 279 VGGPA-----RPASGPRQAREASLVVTCRTNKFRKNNYKWVAASSKSPRV-ARRALSPRV 332
G + +P++ P++ E+ + + + + S SP V ++ LSPR
Sbjct: 1538 RSGSSQELDVKPSASPQERSESDSSPDSKAKT--RTPLRQRSRSGSSPEVDSKSRLSPRR 1595
Query: 333 AAENVCKASAGMANKVEKPQLIADPEPKPRKPATSSKPGSAPSKYKWKASSPSASSSSSF 392
+ + Q +D P+P+ PA + P + S K PS SSS
Sbjct: 1596 SRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSST 1655
Query: 393 RWQSEASSKDHASQLSPVLSRSPSGDRPAVGHSGLKPLSGETPLSAYKVKSRTKIIRRRS 452
SS +H + S S P K KSRT RRRS
Sbjct: 1656 E-----SSPEHPPKSRTARRGSRSSPEP-------------------KTKSRTPP-RRRS 1690
Query: 453 STSLPGDKKSGTSPAATAKSHLSLRRRQA-----LRGKSSPVLKKTPNKGLVQVTTHRLC 507
S S SP T K+ LS R R A R ++ P +++P+ +
Sbjct: 1691 SRS---------SPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRS 1741
Query: 508 RLPPSRAHLPTKEASSLHAVRTAPTSKVI-KTRYRIVKKTPASPLSAPPFPLSLPSWRAR 566
A P + +S +P + + ++R R ++ + S + R R
Sbjct: 1742 SRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRR 1801
Query: 567 RLSLSRSLVLNRLRPVASGGGKAQPGSPWWRSKGYRCIGGVLYKVSANKLSKTSGQPSDA 626
+ S SRS V R R GG SP + + S+ + S P +
Sbjct: 1802 QRSRSRSRVTRRRR----GGSGYHSRSPARQESS---------RTSSRRRRGRSRTPPTS 1848
Query: 627 GSRPLLRTGRLDPAG-SCSRSLASRAVQRSLAIIRQARQRREKRKEYCMYYNRFGRCNRG 685
R RT PA SRS AS A R RR R R R
Sbjct: 1849 RKRSRSRTS---PAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSR---- 1901
Query: 686 ERCPYIHDPEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICSNSNCPYS 745
+ +V R R P S S+ + P + S S P +
Sbjct: 1902 ---------SRTSVTRRRSRSRAS------PVSRRRSRSRTPPVTRRR----SRSRTPTT 1942
Query: 746 HVYV-SRKAEVCSDFLKGYCPLGAKCKKKHTLLCPDFARRGACPRGAQCQLLHRTQK--- 801
SR V + P + ++ + P RR + R++
Sbjct: 1943 RRRSRSRTPPVTRRRSRSRTPPVTR-RRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPV 2001
Query: 802 -RHSRRAATSPAPG-------PSDATARSRVSASHGPRKPSASQRPTR-------QTPSS 846
R R+ TSP P RSR PRK S S+ P +TP +
Sbjct: 2002 TRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRT 2061
Query: 847 AALTAAAVAAPPHCPGGSASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAA---ACS 903
A + +PP SAS SS S S S++PPA+ +H AL + +C
Sbjct: 2062 ARGKRSLTRSPPAIRRRSASGSS----SDRSRSATPPATRNHSGSRTPPVALNSSRMSCF 2117
Query: 904 NRLCKLPSFISLQSSPSPGAQPRVRAPRAPLT 935
+R P+ L SPG + + R P++
Sbjct: 2118 SRPSMSPT--PLDRCRSPGMLEPLGSSRTPMS 2147
Score = 48.1 bits (113), Expect = 4e-05
Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 23/125 (18%)
Query: 810 SPAPGPSDATARSRVSASHGPRKPSASQRPTRQTPSSAALTAAAVAAPPHCPGGSASPSS 869
SP P P +A R P +P+ ++R R + SS++ ++++ ++ S+S SS
Sbjct: 2581 SPTPAPKEAVREGR------PPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2634
Query: 870 SKASSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSSPSPGAQPRVRA 929
S +SSSSSSSSS S P AL S + P PG + R R+
Sbjct: 2635 SSSSSSSSSSSSSSPSPAKPGPQ----ALPKPASPK------------KPPPG-ERRSRS 2677
Query: 930 PRAPL 934
PR P+
Sbjct: 2678 PRKPI 2682
Score = 47.0 bits (110), Expect = 8e-05
Identities = 102/421 (24%), Positives = 152/421 (36%), Gaps = 71/421 (16%)
Query: 130 PSKSGSASASGAQRGSLEEFEETPWSDQRPREGEGEPP-----RGQLQPSRPTRARGTCS 184
P+ SA + A G+ P S G PP R + PS P+++R T
Sbjct: 2363 PASLTSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSE 2422
Query: 185 -VEDPLLVCQKEPGKPRMVKSVGSVGDSPREPRRTVSESVIAVKASFPSSA---LPPRTG 240
P + P + + + D PR P V ++F + + T
Sbjct: 2423 RAPSPSSRMGQAPSQSLLPPAQ----DQPRSP----------VPSAFSDQSRCLIAQTTP 2468
Query: 241 VALGRKLGSHSVASCAPQLLGDRRVDAGHTDQPVPSGSVGGPARPASGPRQAREASLVVT 300
VA + L S +VA+ GD VP VG P PAS A++ S +
Sbjct: 2469 VAGSQSLSSGAVATTTSSA-GDHNGMLSVPAPGVPHSDVGEP--PAS--TGAQQPSALAA 2523
Query: 301 CRTNKFRKNNYKWVAASSKSPRVARRALS-------------------PRVAAENVCKAS 341
+ K R+++ ++SS S + + S P VA + V +
Sbjct: 2524 LQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPT 2583
Query: 342 AGMANKVEKPQLIADPEPKPRKPATSSKPGSAPSKYKWKASSPSASSSSSFRWQSEASSK 401
V + + PEP P K S S+ S +SS S+SSSSS S +SS
Sbjct: 2584 PAPKEAVREGR---PPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2640
Query: 402 DHASQLSPVLSRSPSGDRPAVGHSGLKPLSGE-------TPLSAYKVK---SRTKIIRRR 451
+S S P S KP GE P+ + + S + + RRR
Sbjct: 2641 SSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRR 2700
Query: 452 SSTS-LPGDKKSGTSPAATAKSHLSLRRRQALRGKS-SPVLKKTPNKGLVQVTTHRLCRL 509
S P D++S +S + R+ RG S SP K+ + HR R
Sbjct: 2701 PSPQPSPRDQQSSSSERGS---------RRGQRGDSRSPSHKRRRETPSPRPMRHRSSRS 2751
Query: 510 P 510
P
Sbjct: 2752 P 2752
Score = 46.2 bits (108), Expect = 1e-04
Identities = 127/562 (22%), Positives = 189/562 (33%), Gaps = 84/562 (14%)
Query: 34 PAASGWQPPTYHSGRAFSARYPRPSRRGYSSHHGPSWRKKYSLV-NRPPGPSDPPADHAV 92
P+AS + S A+ P R+ S P K L R S P
Sbjct: 1549 PSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKP 1608
Query: 93 RPLHGARGG-----QPPVPQQHVLERQVQLSQGQNVVIKVKPPSKSGSASASGAQRGSLE 147
R A+ G +P P L R+ + K + PS GS+S E
Sbjct: 1609 RAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSS----KGRGPSPEGSSST--------E 1656
Query: 148 EFEETPWSDQRPREGEGEPPRGQLQPSRPTRARGTCSVEDPLLVCQKEPGKPRMVKSVGS 207
E P + R G P + + P R R + S P L K R+ + S
Sbjct: 1657 SSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRS--SPELT-----RKARLSRRSRS 1709
Query: 208 VGDSPREPRRTVSESVIAVKASFPSSALPPRTGVALGRKLGSHSVASCAPQLLGDRRVDA 267
SP RT + S P A R+ RR A
Sbjct: 1710 ASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSS---------------------RRRRSA 1748
Query: 268 GHTDQPVPSGSVGGPARPASGPRQAREASLVVTCRTNKFRKNNYKWVAASSKSPRVARRA 327
S P+ G +++R S RT + R + SS+S R+
Sbjct: 1749 SSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRS-----GSSQSTSRRRQR 1803
Query: 328 LSPRVAAENVCKASAGMANKVEKPQLIADPEPKPRKPATSSKPGSAPSKYKWKASSPSAS 387
R + +G + R PA ++ + + ++ +P S
Sbjct: 1804 SRSRSRVTRRRRGGSGYHS---------------RSPARQESSRTSSRRRRGRSRTPPTS 1848
Query: 388 SSSSFRWQSEASSKDHASQLSPVLSRSPSGDRPAVGHSGLKPLSGETPLSAYKVKSRTKI 447
S S A K S+ SP R P + S + S +P+S + +SRT +
Sbjct: 1849 RKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLI--SRRRSRSRTSPVSRRRSRSRTSV 1906
Query: 448 IRRRS-STSLPGDK---KSGTSPAATAKSHL---SLRRRQALRGKSSPVLKKTPNKGLVQ 500
RRRS S + P + +S T P +S + RRR R ++ PV ++
Sbjct: 1907 TRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRS--RSRTPPVTRRRSRSRTPP 1964
Query: 501 VTTHR-LCRLPPSRAHLPTKEASSLHAVRT-APTSKVIKTRYRIVKKTPASPLSAPPFPL 558
VT R R P S + R+ + TS V + R R + SP++
Sbjct: 1965 VTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSR----SRTSPVTRRRSRS 2020
Query: 559 SLPSWRARRLSLSRSLVLNRLR 580
P RR S SR+ +L R R
Sbjct: 2021 RTPP-AIRRRSRSRTPLLPRKR 2041
Score = 41.6 bits (96), Expect = 0.004
Identities = 42/125 (33%), Positives = 60/125 (48%), Gaps = 27/125 (21%)
Query: 811 PAPGPSDATARSRVSASHGPRKPSA--SQRPTRQTPSSAALTAAAVAAPPHCPGGSASPS 868
PAPG + AS G ++PSA + +P ++ SS++ ++ S+S S
Sbjct: 2497 PAPGVPHSDV-GEPPASTGAQQPSALAALQPAKERRSSSSSSS------------SSSSS 2543
Query: 869 SSKASSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSSPSPGAQPRVR 928
SS +SSSSSSSSS +S D E SL A L ++P SP+P + VR
Sbjct: 2544 SSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVA-----LKRVP-------SPTPAPKEAVR 2591
Query: 929 APRAP 933
R P
Sbjct: 2592 EGRPP 2596
Score = 39.7 bits (91), Expect = 0.013
Identities = 119/519 (22%), Positives = 184/519 (35%), Gaps = 78/519 (15%)
Query: 33 TPAASGWQPP--TYHSGRAFSARYPR----------------PSRRGYSSHHGPSWRKKY 74
+P GW T GR+ SAR R P+RRG S P+ R+
Sbjct: 536 SPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPARRGRSRSRTPARRRSR 595
Query: 75 SLV------------NRPPGPSDPPADHAVR---PLHGARGGQPPVPQQHVLERQVQLSQ 119
S R S PA R P+ + P + + +
Sbjct: 596 SRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR 655
Query: 120 GQNVVIKVKPPSKSGSASASGAQRGSLEEFEETPWSDQRPREGEGEPPRGQLQPSRPTRA 179
G++ + + P++ G + + R S TP +R R P RG+ + SR
Sbjct: 656 GRS---RSRTPARRGRSRSRTPARRSGRSRSRTP--ARRGRSRSRTPRRGRSR-SRSLVR 709
Query: 180 RGTCSVEDPLLVCQKEPGKPRMVKSVGSVGDSPREPRRTVSESVIAVKAS--FPSSALPP 237
RG P + R KS S S + +S I+ + S S
Sbjct: 710 RGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKA 769
Query: 238 RTGVALGRKLGSHSVASCAPQLLGDRRVDAGHTDQPVPSGSVGGPARPASGPRQAREASL 297
++ ++L R L S RR +G + QP A+ + PR++R +S
Sbjct: 770 KSRLSLRRSLSGSSPCPKQKSQTPPRRSRSG-SSQP--------KAKSRTPPRRSRSSSS 820
Query: 298 VVTCRTNKFRKNNYKWVAASSKSPRVARRALSPRVAAENVCKASAGMANKVEKP--QLIA 355
+ +K ++SS P+V + PR + +A+ + +
Sbjct: 821 PPPKQKSKTPSRQSH--SSSSPHPKV-KSGTPPRQGSITSPQANEQSVTPQRRSCFESSP 877
Query: 356 DPEPKPRKPATSSKPGSAPSKYKWKA---SSPSASSSSSFRWQSEAS--SKDHASQLSPV 410
DPE K R P+ S GS+P + K SPS SSS + ++ S + H+ SP
Sbjct: 878 DPELKSRTPSRHSCSGSSPPRVKSSTPPRQSPSRSSSPQPKVKAIISPRQRSHSGSSSPS 937
Query: 411 LSRSPSGDRPAVGHSGLKPLSGETPLSAYKVKSRTKIIRRRSSTSLPGDK-KSGTSPAAT 469
SR S P S + P S V+SR S +S P K K T P +
Sbjct: 938 PSRVTSRTTPRRSRS-VSPCS--------NVESRLLPRYSHSGSSSPDTKVKPETPPRQS 988
Query: 470 AKSHLSLRRR--------QALRGKSSPVLKKTPNKGLVQ 500
+S + +L G SP ++ LVQ
Sbjct: 989 HSGSISPYPKVKAQTPPGPSLSGSKSPCPQEKSKDSLVQ 1027
Score = 38.9 bits (89), Expect = 0.023
Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 10/152 (6%)
Query: 792 QCQLLHRTQKRHSRRAATSPAPGPSDATARSRVSASHGPRKPSASQRPTRQTPSSAALTA 851
Q L Q RR+++S + S +++ S S+S S+S P +
Sbjct: 2517 QPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVAL 2576
Query: 852 AAVAAPPHCP------GGSASPSSSKASS-SSSSSSSPPASLDHEAPSLQEAALAAACSN 904
V +P P G P+ +K SSSSSSS +S + S ++ +++ S+
Sbjct: 2577 KRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2636
Query: 905 RLCKLPSFISLQSSPS---PGAQPRVRAPRAP 933
S S SP+ P A P+ +P+ P
Sbjct: 2637 SSSSSSSSSSSSPSPAKPGPQALPKPASPKKP 2668
Score = 32.7 bits (73), Expect = 1.6
Identities = 35/148 (23%), Positives = 53/148 (35%), Gaps = 9/148 (6%)
Query: 797 HRTQKRHSRRAATSPAPGPSDATARSRVSASHG-----PRKPSASQRPTRQTPSSAALTA 851
H T + + T+ A P+ T+ A G PR P ++ S L
Sbjct: 2345 HATAPVNIAGSRTAAALAPASLTSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDR 2404
Query: 852 AAVAAPPHCPGGSASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPS 911
A PP P S S S SS +P SL A + + +A S++
Sbjct: 2405 ARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQ----SR 2460
Query: 912 FISLQSSPSPGAQPRVRAPRAPLTKDSG 939
+ Q++P G+Q A T +G
Sbjct: 2461 CLIAQTTPVAGSQSLSSGAVATTTSSAG 2488
Score = 31.2 bits (69), Expect = 4.8
Identities = 40/151 (26%), Positives = 57/151 (37%), Gaps = 11/151 (7%)
Query: 798 RTQKRHSRRAATSPAPGPSDATARSRVSASHGPRKPSASQRPTRQ-TPSSAALTAAAVAA 856
RT R +SP P T R R + P + P R+ + S +++ VA
Sbjct: 1471 RTPSRGRSECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSESSVDQKTVAR 1530
Query: 857 PP---HCPGGSASPSSSKASSS----SSSSSSPPASLDHEAPSLQEAALAAA--CSNRLC 907
P GS+ K S+S S S SSP + P Q + ++ ++
Sbjct: 1531 TPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSR 1590
Query: 908 KLPSFISLQSSPSPGAQPRVRAPRAPLTKDS 938
P SSP +PR APRA DS
Sbjct: 1591 LSPRRSRSGSSPEVKDKPRA-APRAQSGSDS 1620
Score = 31.2 bits (69), Expect = 4.8
Identities = 36/136 (26%), Positives = 51/136 (37%), Gaps = 18/136 (13%)
Query: 804 SRRAATSPAPGPSDATARSRVSASHGPRKPSASQRPTRQTPSSAALTAAAVAAPPHCPGG 863
S +SP P TAR +S P+ S + R + SS LT A
Sbjct: 1652 SSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKA---------R 1702
Query: 864 SASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSSPSPGA 923
+ S S +SS + S +PP + S E A + S R +S+ SP
Sbjct: 1703 LSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRR---------RRSASSPRT 1753
Query: 924 QPRVRAPRAPLTKDSG 939
+ R R+P K G
Sbjct: 1754 KTTSRRGRSPSPKPRG 1769
Score = 31.2 bits (69), Expect = 4.8
Identities = 51/237 (21%), Positives = 79/237 (33%), Gaps = 26/237 (10%)
Query: 27 NAPAPGTPAASGWQPPTYHSGR---AFSARYPRPSRRGYSSHHGPSWRKKYSLVNRPPGP 83
+ PAPG P + +PP + A +A P RR SS S S +
Sbjct: 2495 SVPAPGVPHSDVGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSS 2554
Query: 84 SDPPADH-------AVRPLHGARGGQPPVPQQHVLERQVQLSQGQNVVIKVKPPSKSGSA 136
S + V+P + P P R+ + + K + S S S+
Sbjct: 2555 SSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSS 2614
Query: 137 SASGAQRGSLEEFEETPWSDQRPREGEGEPPRGQLQPSRPTRARGTCSVEDPLLVCQKEP 196
S+S + S + S P++P G ++ P + P
Sbjct: 2615 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKP----GPQALPKPASPKKPPP 2670
Query: 197 GKPRMVKSVGSVGDSPREP----RRTVSESVIAVKASFPSSALPPRTGVALGRKLGS 249
G+ R SPR+P R + S S V+ PS PR + + GS
Sbjct: 2671 GERR--------SRSPRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGS 2719
>gi|47519675 microtubule-associated protein 4 isoform 2 [Homo
sapiens]
Length = 887
Score = 57.0 bits (136), Expect = 8e-08
Identities = 96/408 (23%), Positives = 148/408 (36%), Gaps = 67/408 (16%)
Query: 159 PREGEGEPPRGQLQPS----RPTRARGTCSVEDPLLVCQKEPGKPRMVKSVGSVGDSPRE 214
P EG+ E +P RPT++RG + + ++E + + +KS G P E
Sbjct: 353 PGEGKKEDKSRMAEPMKGYMRPTKSRGLTPLLPKSTIQEQE--RHKQLKSAGIA--RPEE 408
Query: 215 PRRTVSESVIAVKASFPSSALPPRTGVALGRKLGSHSVASCAPQLLGDRRVDAGHTDQPV 274
R VS + + P+ LPP +++ T QP
Sbjct: 409 GRPVVSGTGNDITTP-PNKELPPSP----------------------EKKTKPLATTQPA 445
Query: 275 PSGSVGGPARPASGPRQAREASLVVTCRTNKFRKNNYKWVAASSKSPRVARRALSPRVAA 334
+ + +P S P+Q + + +K P L P
Sbjct: 446 KTSTSKAKTQPTSLPKQPAPTT-----------------IGGLNKKPMSLASGLVPAAPP 488
Query: 335 ENVCKASAG---MANKVEKPQLIADPEPKPRKPATSSKPGSAPSKYKWKASSPSASSSSS 391
+ ASA + +K KP+ IAD + P K A+ SKP SAP+ S S S S
Sbjct: 489 KRPAVASARPSILPSKDVKPKPIADAKA-PEKRASPSKPASAPA---------SRSGSKS 538
Query: 392 FRWQSEASSKDHASQLSPVLSRSPSGDRPAVGHSGLKPLSGETPLSAYKVKSRTKIIRRR 451
+ ++ ++ + P SRSPS P + +K + KS + R
Sbjct: 539 TQTVAKTTTAAAVASTGP-SSRSPSTLLPK-KPTAIKTEGKPAEVKKMTAKSVPADLSRP 596
Query: 452 SSTSLPGDKK----SGTSPAATAKSHLSLRRRQALRGKSSPVLKKTPNKGLVQVTTHRLC 507
STS KK SGT+PAA R ++P + K P TT RL
Sbjct: 597 KSTSTSSMKKTTTLSGTAPAAGVVPSRVKATPMPSRPSTTPFIDKKPTSAKPSSTTPRLS 656
Query: 508 RLPPSRAHLPTKEASSLHAVRTAPTSKVIKTRYRIVKKTPASPLSAPP 555
RL + + K S + R ++ KKT A+ + P
Sbjct: 657 RLATNTSAPDLKNVRSKVGSTENIKHQPGGGRAKVEKKTEAAATTRKP 704
Score = 37.0 bits (84), Expect = 0.087
Identities = 62/295 (21%), Positives = 102/295 (34%), Gaps = 43/295 (14%)
Query: 124 VIKVKPPSKSGSASASGAQRGSLEEFEETPWSDQRPREGEGEPPRGQLQPSRPTRARGTC 183
++ PP + ASA + S ++ + P +D + E P + P+ + ++ T
Sbjct: 482 LVPAAPPKRPAVASARPSILPS-KDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQ 540
Query: 184 SVEDPLLVCQKEPGKPRMVKSVGSVGDSPREPRRTVSESVIAVKASFPSSALPPRTGVAL 243
+V K +V S G S R P + + A+K + + T ++
Sbjct: 541 TV-----------AKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPAEVKKMTAKSV 589
Query: 244 GRKLGSHSVASCAPQLLGDRRVDAGHTDQPVPSGSVGGPARPASG--PRQAREASLVVTC 301
L R + T + ++ G A PA+G P + + +
Sbjct: 590 PADLS---------------RPKSTSTSSMKKTTTLSGTA-PAAGVVPSRVKATPMPSRP 633
Query: 302 RTNKFRKNNYKWVAASSKSPRVARRALSPRV-----------AAENVCKASAGMANKVEK 350
T F SS +PR++R A + + EN+ G KVEK
Sbjct: 634 STTPFIDKKPTSAKPSSTTPRLSRLATNTSAPDLKNVRSKVGSTENIKHQPGGGRAKVEK 693
Query: 351 PQLIADPEPKPRKPATSSKPGSAPSKYKWKASSPSASSS--SSFRWQSEASSKDH 403
A KP A + G S K A S S QS+ SKD+
Sbjct: 694 KTEAAATTRKPESNAVTKTAGPIASAQKQPAGKVQIVSKKVSYSHIQSKCGSKDN 748
Score = 31.2 bits (69), Expect = 4.8
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 7/133 (5%)
Query: 811 PAPGPSDATARSRVSASHG------PRKPS-ASQRPTRQTPSSAALTAAAVAAPPHCPGG 863
PAP + +S + G P++P+ AS RP+ A A P
Sbjct: 463 PAPTTIGGLNKKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRAS 522
Query: 864 SASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSSPSPGA 923
+ P+S+ AS S S S+ A A + + S L K P+ I + P+
Sbjct: 523 PSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPAEVK 582
Query: 924 QPRVRAPRAPLTK 936
+ ++ A L++
Sbjct: 583 KMTAKSVPADLSR 595
>gi|197276602 microtubule-associated protein 4 isoform 5 [Homo
sapiens]
Length = 817
Score = 55.5 bits (132), Expect = 2e-07
Identities = 88/362 (24%), Positives = 133/362 (36%), Gaps = 67/362 (18%)
Query: 159 PREGEGEPPRGQLQPS----RPTRARGTCSVEDPLLVCQKEPGKPRMVKSVGSVGDSPRE 214
P EG+ E +P RPT++RG + + ++E + + +KS G P E
Sbjct: 353 PGEGKKEDKSRMAEPMKGYMRPTKSRGLTPLLPKSTIQEQE--RHKQLKSAGIA--RPEE 408
Query: 215 PRRTVSESVIAVKASFPSSALPPRTGVALGRKLGSHSVASCAPQLLGDRRVDAGHTDQPV 274
R VS + + P+ LPP +++ T QP
Sbjct: 409 GRPVVSGTGNDITTP-PNKELPPSP----------------------EKKTKPLATTQPA 445
Query: 275 PSGSVGGPARPASGPRQAREASLVVTCRTNKFRKNNYKWVAASSKSPRVARRALSPRVAA 334
+ + +P S P+Q + + +K P L P
Sbjct: 446 KTSTSKAKTQPTSLPKQPAPTT-----------------IGGLNKKPMSLASGLVPAAPP 488
Query: 335 ENVCKASAG---MANKVEKPQLIADPEPKPRKPATSSKPGSAPSKYKWKASSPSASSSSS 391
+ ASA + +K KP+ IAD + P K A+ SKP SAP+ S S S S
Sbjct: 489 KRPAVASARPSILPSKDVKPKPIADAKA-PEKRASPSKPASAPA---------SRSGSKS 538
Query: 392 FRWQSEASSKDHASQLSPVLSRSPSGDRPAVGHSGLKPLSGETPLSAYKVKSRTKIIRRR 451
+ ++ ++ + P SRSPS P + +K + KS + R
Sbjct: 539 TQTVAKTTTAAAVASTGP-SSRSPSTLLPK-KPTAIKTEGKPAEVKKMTAKSVPADLSRP 596
Query: 452 SSTSLPGDKK----SGTSPAATAKSHLSLRRRQALRGKSSPVLKKTPNKGLVQVTTHRLC 507
STS KK SGT+PAA R ++P + K P TT RL
Sbjct: 597 KSTSTSSMKKTTTLSGTAPAAGVVPSRVKATPMPSRPSTTPFIDKKPTSAKPSSTTPRLS 656
Query: 508 RL 509
RL
Sbjct: 657 RL 658
Score = 31.2 bits (69), Expect = 4.8
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 7/133 (5%)
Query: 811 PAPGPSDATARSRVSASHG------PRKPS-ASQRPTRQTPSSAALTAAAVAAPPHCPGG 863
PAP + +S + G P++P+ AS RP+ A A P
Sbjct: 463 PAPTTIGGLNKKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRAS 522
Query: 864 SASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSSPSPGA 923
+ P+S+ AS S S S+ A A + + S L K P+ I + P+
Sbjct: 523 PSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPAEVK 582
Query: 924 QPRVRAPRAPLTK 936
+ ++ A L++
Sbjct: 583 KMTAKSVPADLSR 595
>gi|32880199 makorin ring finger protein 2 [Homo sapiens]
Length = 416
Score = 54.7 bits (130), Expect = 4e-07
Identities = 51/187 (27%), Positives = 71/187 (37%), Gaps = 23/187 (12%)
Query: 725 KMPVCSYFLKGIC-SNSNCPYSHVYVSRK-AEVCSDFLKGYCPLGAKCKKKHTLLCPDFA 782
K C YF+ G+C S C +SH + K + +C + KGYC G +C+ HT
Sbjct: 4 KQITCRYFMHGVCREGSQCLFSHDLANSKPSTICKYYQKGYCAYGTRCRYDHT------- 56
Query: 783 RRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDATARSRVSASHGPRKPSASQRPTRQ 842
R A GA + H A SP P PS+ TA + SH P K R
Sbjct: 57 RPSAAAGGAVGTMAHSVPS----PAFHSPHP-PSEVTASIVKTNSHEPGKREKRTLVLRD 111
Query: 843 TPSSAALTAAAVAAPPHCPGGSASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAAAC 902
S + PG + P S P + LD L + +++
Sbjct: 112 RNLSGMAERKTQPSMVSNPGSCSDP-------QPSPEMKPHSYLDAIRSGLDDVEASSSY 164
Query: 903 SN--RLC 907
SN +LC
Sbjct: 165 SNEQQLC 171
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 53.1 bits (126), Expect = 1e-06
Identities = 113/499 (22%), Positives = 172/499 (34%), Gaps = 74/499 (14%)
Query: 48 RAFSARYPRPSRRGYSSHHGPSWRKKYSLVNRP-PGPSDPPADHAVRPLHGARGGQPPVP 106
R+ S + RP RR S S R++ S RP P PP P H R + PV
Sbjct: 289 RSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRH--RRSRSPVR 346
Query: 107 QQHVLERQVQLSQGQNVVIKVKPPSKSGSASASGAQRGS--LEEFEETPWSDQRPREGEG 164
++ + S + + + P K S R + L P RP
Sbjct: 347 RRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPAT 406
Query: 165 EPPRGQLQPS---------------------RPTRARGTCSVEDP--------LLVCQKE 195
PP+ + P+ + T+ +GT E P + + + E
Sbjct: 407 PPPKTRHSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESE 466
Query: 196 PGKPRMVKSVGSVGDSPREPRRTVSESVIAVKASFPSSALPPRTGVALG-----RKLGSH 250
K + + SV + R+ S + +S P R+ V G R+
Sbjct: 467 EDKGGKMAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPS 526
Query: 251 SVASCAPQLLGDRRVDAGH---TDQPVPSGSVGGPARPASGPRQAREASLVVTCRTNKFR 307
AS +P+ G + P P+ P+ PA PR+ R + RT
Sbjct: 527 RSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPS-PAPPPRRRRTPTPPPRRRT---- 581
Query: 308 KNNYKWVAASSKSPRVARRALSPRVAAENVCKASAGM-------ANKVEKPQLIADPEPK 360
SP RR+ SPR + + + + A+ P+ A P P
Sbjct: 582 -----------PSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPP 630
Query: 361 PRKPATSSKPGSAPSKYKWKASSPSASS-----SSSFRWQSEASSKDHASQLSPVLSRSP 415
P++ + S P S K SPS SS SS R EA S + SP S P
Sbjct: 631 PKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSP--SPRP 688
Query: 416 SGDRPAVGHSGLKPLSGETPLSAYKVKSRTKIIRRRSSTSLPGDKKSGTSPAATAKSHLS 475
+ + ++ + +P T+ IRR S T P K SP+ + +S
Sbjct: 689 RAPQTSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVS 748
Query: 476 LRRRQALRGKSSPVLKKTP 494
R ++ G P KK P
Sbjct: 749 SSR--SVSGSPEPAAKKPP 765
Score = 51.6 bits (122), Expect = 3e-06
Identities = 129/557 (23%), Positives = 179/557 (32%), Gaps = 101/557 (18%)
Query: 46 SGRAFSARYPRPSRRGYSSHHGPSWRKKYSLVNRPPGPSDPPADHAVRPLHGARGGQPPV 105
S R +R P P RR P R++ +R P + P + + P
Sbjct: 171 SPRRRKSRSPSPRRRS-----SPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPE 225
Query: 106 PQQHVLERQVQLSQGQNVVIKVKPPSKSGSASASGAQRGSLEEFEETPWSDQRPREGEGE 165
P V E VQ + + ++KV P ++ S +E E+ RPR
Sbjct: 226 PSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPSPEKNSKKEKEK---EKTRPRSRSRS 282
Query: 166 PPRGQLQPSRPTRARGTCSVEDPLLVCQKEPGKPRMVKSVGSVGDSPR---EPRRTVSES 222
R + + P+ R PR S SPR PRR S
Sbjct: 283 KSRSRTRSRSPSHTR------------------PRRRHRSRSRSYSPRRRPSPRRRPS-- 322
Query: 223 VIAVKASFPSSALPPRTGVALGRKLGSHSVA----SCAPQLLGDRRVDAGHTDQPVPSGS 278
P PPR R S S + L G + + P
Sbjct: 323 --------PRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKP 374
Query: 279 VGGPARPASGPRQAREASLVVTCRTNKFR---------KNNYKWVAASSKSPRVARRALS 329
P R +S PR+ R S + + R K + S R +R ++S
Sbjct: 375 ---PKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVS 431
Query: 330 PRVAAENVCKASAGMANKVEKPQLIADPEPKPRKPATSSKPGSAPSKYKWKASSPSASSS 389
P + V K K E P P PKPRK S S K A++ S
Sbjct: 432 PGRTSGKVTKHKG--TEKRESP----SPAPKPRKVELSE---SEEDKGGKMAAADSVQQR 482
Query: 390 SSFRWQSEASSKDHASQLSPVLSRSPSGDRPAVGHSGLKPLSGETPLSAYKVKSRTKIIR 449
+R Q++ SS D S S S +RP H + +V R +
Sbjct: 483 RQYRRQNQQSSSDSGS------SSSSEDERPKRSH-----------VKNGEVGRRRRHSP 525
Query: 450 RRSSTSLPGDKKSGTSPAATAKSHLS---LRRRQALRGKSSPVLKKTPNKGLVQVTTHRL 506
RS++ P ++ TSP + S RRR++ P ++TP R
Sbjct: 526 SRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTP-----PPRRR 580
Query: 507 CRLPPSRAHLPTKEASSLHAVRTAPTSKVIKTRYRIVKKTP---ASPL---------SAP 554
PP R P+ S R S K R P ASP S P
Sbjct: 581 TPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPP 640
Query: 555 PFPLSLPSWRARRLSLS 571
P S P + R SLS
Sbjct: 641 PKQRSSPVTKRRSPSLS 657
Score = 45.8 bits (107), Expect = 2e-04
Identities = 128/566 (22%), Positives = 192/566 (33%), Gaps = 66/566 (11%)
Query: 9 RQIRLLQGLIDDYKTLHGNAPAPGTPAASGWQPPTYHSGRAFSARYPRPSRRGYSSHH-- 66
R+ R L + H +P P TP P T HS + R SR S
Sbjct: 383 RKTRRLSPSASPPRRRHRPSP-PATPP-----PKTRHSPTPQQSNRTRKSRVSVSPGRTS 436
Query: 67 GPSWRKKYSLVNRPPGPSDPPADHAVRPLHGARGGQPPVPQQHVLERQVQLSQGQNVVIK 126
G + K + P P+ P + +GG+ RQ + Q+
Sbjct: 437 GKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQS---- 492
Query: 127 VKPPSKSGSASASGAQRGSLEEFEETPWSDQR---PREGEGEPPRGQLQPSRPTRARGTC 183
S SGS+S+S +R + +R P PR + + + P R R
Sbjct: 493 ---SSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSP-RGRRRR 548
Query: 184 SVEDPLLVCQKEPGKPRMVKSVGSVGDSPREPRRTVSESVIAVKASFPSSALPPRTGVAL 243
S P ++ P SP P R + PS PPR
Sbjct: 549 SPSPPPTRRRRSP--------------SPAPPPRRRRTPTPPPRRRTPSP--PPRRRSPS 592
Query: 244 GRKLGSHSVASCAPQLLGDRRVDAGHTDQPVPSGSVGGPARPASGPRQAREASLVVTCRT 303
R+ +P RR + + P R S ++ S VT R
Sbjct: 593 PRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRR 652
Query: 304 NKFRKNNYKWVAASSKSPRVAR-------RALSPRVAAENVCKASAGMANKVEK-PQLIA 355
+ + ++ ++ S+S R AR + SPR A + + PQ
Sbjct: 653 SPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQ 712
Query: 356 DPEPKPRKPATSSKPGSAPSKYKWKASSPS------ASSSSSFRWQSEASSKDHASQLSP 409
P P R P P K K KA+SPS SSS S E ++K + SP
Sbjct: 713 SPSPSTR-PIRRVSRTPEPKKIK-KAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSP 770
Query: 410 VLSRSPSGD-RPAVGHSGLK-PLSGETPLSAYKVKSRTKIIRRRSSTSLPGDKKSGTSPA 467
V S+SPS + PAV K P +P + K +++ DKK
Sbjct: 771 VQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKDKKH----- 825
Query: 468 ATAKSHLSLRRRQALRGKSSPVLKKTPNKGLVQVTTHRLCRLPPSRAHLPTKEASSLHAV 527
K H ++ +A+ ++ + TP + T L + P A P KE S
Sbjct: 826 ---KKHKKHKKEKAVAAAAAAAV--TP--AAIAAATTTLAQEEPVAAPEPKKETESEAED 878
Query: 528 RTAPTSKVIKTR-YRIVKKTPASPLS 552
K ++ + R ++K SP S
Sbjct: 879 NLDDLEKHLREKALRSMRKAQVSPQS 904
Score = 42.4 bits (98), Expect = 0.002
Identities = 58/222 (26%), Positives = 81/222 (36%), Gaps = 22/222 (9%)
Query: 361 PRKPATSSKPGSAPSKYKWKASSPSASSSSSFRWQSEASSKDHASQL-SPVLSRSPSGDR 419
PR S P AP K + P S EA+S ++ P P
Sbjct: 201 PRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATSTSDILKVPKPEPIPEPKEPS 260
Query: 420 PAVGHSGLKPLSGETPLSAYKVKSRTKIIRRRSSTSLPGDKKSGTSPAATAKSHLSLRRR 479
P K P S + KSR++ R S + P + S + S RRR
Sbjct: 261 PEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRS------YSPRRR 314
Query: 480 QALRGKSSPVLKKTPNKGLVQVTTHRLCRLPPSRAHLPTKEASSLHAVRTAPTSKVIKTR 539
+ R + SP ++TP + + HR R P R + SS ++ +S ++R
Sbjct: 315 PSPRRRPSP-RRRTPPRRMPPPPRHRRSRSPVRR-----RRRSSASLSGSSSSSSSSRSR 368
Query: 540 YRIVKKTPASPLSAPPFPLSLPSWRARRLSLSRSLVLNRLRP 581
SP PP S P + RRLS S S R RP
Sbjct: 369 ---------SPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRP 401
Score = 40.8 bits (94), Expect = 0.006
Identities = 43/144 (29%), Positives = 61/144 (42%), Gaps = 11/144 (7%)
Query: 805 RRAATSPAPGP--SDATARSRVSASHGPRKPSASQRPTRQTPSSAALTAAAVAAPPHCPG 862
RR + SP P S T R S S RK S+ R TR+ S + + P P
Sbjct: 633 RRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQ 692
Query: 863 GSASP-------SSSKASSSSSSSSSPPASLDHEAPSLQEAALAAACS-NRLCKLPSFIS 914
S+SP SSS S S S+ P P ++ AA+ S + ++ S S
Sbjct: 693 TSSSPPPVRRGASSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRS 752
Query: 915 LQSSPSPGAQPRVRAPRAPLTKDS 938
+ SP P A+ + AP +P+ S
Sbjct: 753 VSGSPEPAAK-KPPAPPSPVQSQS 775
Score = 40.0 bits (92), Expect = 0.010
Identities = 49/178 (27%), Positives = 72/178 (40%), Gaps = 33/178 (18%)
Query: 788 PRGAQCQLLHRTQKRHS-------RRAATSPAPGPSDATARSRVSASHGPRKPSASQRPT 840
PR Q + R ++R S RR + SPAP P R R + + PR+ + S P
Sbjct: 533 PRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPP-----RRRRTPTPPPRRRTPSPPPR 587
Query: 841 RQTPSSAALT-------------AAAVAAPPHCPGGSASPSSSKASSSSSSSSSPPASLD 887
R++PS + A+PP P ASPS S S P
Sbjct: 588 RRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHS----PPPKQ 643
Query: 888 HEAPSLQEAALAAACSNRLCKLPSFISLQS-SPSPGAQ--PRVRAPRAPLTKDSGKPL 942
+P + + + + +R PS + ++ SP P + P R PRAP T S P+
Sbjct: 644 RSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKRHSPSPR-PRAPQTSSSPPPV 700
Score = 36.2 bits (82), Expect = 0.15
Identities = 46/153 (30%), Positives = 61/153 (39%), Gaps = 26/153 (16%)
Query: 801 KRHSRRAATSPAPGPSDATARSRVSASHGPRK-PSASQRPT--RQTPSSAALTAAAVAAP 857
K SR + SP+ RSR S S+ PR+ PS +RP+ R+TP + P
Sbjct: 283 KSRSRTRSRSPSHTRPRRRHRSR-SRSYSPRRRPSPRRRPSPRRRTPPRR------MPPP 335
Query: 858 PHCPGG----------SASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLC 907
P SAS S S +SSSSS S SPP S + RL
Sbjct: 336 PRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRK------TRRLS 389
Query: 908 KLPSFISLQSSPSPGAQPRVRAPRAPLTKDSGK 940
S + PSP A P + +P + S +
Sbjct: 390 PSASPPRRRHRPSPPATPPPKTRHSPTPQQSNR 422
Score = 35.0 bits (79), Expect = 0.33
Identities = 39/158 (24%), Positives = 57/158 (36%), Gaps = 26/158 (16%)
Query: 800 QKRHS-----RRAATSPAPGPSDATARSRVSASHGPRKPSASQRPTRQTPSSAALTAAAV 854
Q+R+S +R SP P P + R S S P++ + P +Q S +
Sbjct: 601 QRRYSPSPPPKRRTASPPPPP-----KRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPS 655
Query: 855 AAPPHCPGGSASPSSSKASSSS-----SSSSSPPASLDHEAPSLQEAALAAACSNRLCKL 909
+ H G S S S+ +A S S S P A +P +++ R
Sbjct: 656 LSSKHRKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRR---- 711
Query: 910 PSFISLQSSPSPGAQPRVRAPRAPLTKDSGKPLHIKPR 947
SPSP +P R R P K K P+
Sbjct: 712 -------QSPSPSTRPIRRVSRTPEPKKIKKAASPSPQ 742
Score = 32.7 bits (73), Expect = 1.6
Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 9/109 (8%)
Query: 783 RRGACPRGAQCQLLHRTQK----RHSRRAATSPAPGPSDATARSRVSASHGPRKPSASQR 838
RR PR HR + R R +A+ S +++RSR P++ S+ R
Sbjct: 324 RRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPR 383
Query: 839 PTRQTPSSAA-----LTAAAVAAPPHCPGGSASPSSSKASSSSSSSSSP 882
TR+ SA+ + A PP S +P S + S S SP
Sbjct: 384 KTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSP 432
Score = 32.7 bits (73), Expect = 1.6
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 805 RRAATSP----APGPSDATARSRVSASHGPRK----PSASQRPTRQTPSSAALT-----A 851
R A++SP +P PS R RVS + P+K S S + R+ SS +++ A
Sbjct: 702 RGASSSPQRRQSPSPSTRPIR-RVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPA 760
Query: 852 AAVAAPPHCPGGSASPSSS-------KASSSSSSSSSPPASLDHE 889
A P P S SPS++ K + S + S SPP + D E
Sbjct: 761 AKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSPSPPRNSDQE 805
>gi|15812178 zinc finger protein 36, C3H type-like 2 [Homo sapiens]
Length = 494
Score = 52.4 bits (124), Expect = 2e-06
Identities = 54/182 (29%), Positives = 69/182 (37%), Gaps = 35/182 (19%)
Query: 752 KAEVCSDFLK-GYCPLGAKCKKKH---------------TLLCPDFARRGACPRGAQCQL 795
K E+C F + G C G KC+ H T LC F G CP G +C
Sbjct: 155 KTELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCPYGPRCHF 214
Query: 796 LHRTQKRHSRRAATSPAPGPSDATARSRVSASHGPRKP--------------SASQRPTR 841
+H +R R A + A G A PR+P S +P
Sbjct: 215 IHNADER--RPAPSGGASGDLRAFGTRDALHLGFPREPRPKLHHSLSFSGFPSGHHQPPG 272
Query: 842 QTPSSAALTAAAVAAPPHCPGGSASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAAA 901
S L + PP SAS SS ASS SS+S+ AS AP+ +A AAA
Sbjct: 273 GLESPLLLDSPTSRTPPPPSCSSASSCSSSASSCSSASA---ASTPSGAPTCCASAAAAA 329
Query: 902 CS 903
+
Sbjct: 330 AA 331
Score = 48.5 bits (114), Expect = 3e-05
Identities = 100/409 (24%), Positives = 140/409 (34%), Gaps = 47/409 (11%)
Query: 544 KKTPASPLSAPPFPLSLPSWRARRLSLSRSLVLNRLRPVASGGGKAQPGSPWWRSKGYRC 603
KK +P++A P P + RR S S L P PG+ S G
Sbjct: 33 KKAVGTPVAAAPSSGFAPGF-LRRHSASNLHALAHPAPSPGSCSPKFPGAANGSSCGSAA 91
Query: 604 IGGVLYKVSANKLSKTSGQPSDA--GSRPLLRTGRLDPAGSCSRSLASRAVQRSLAIIRQ 661
GG S L + SG A R G S+ L Q+ Q
Sbjct: 92 AGG---PTSYGTLKEPSGGGGTALLNKENKFRDRSFSENGDRSQHLLHLQQQQKGGGGSQ 148
Query: 662 ARQRREKRKEYCMYYNRFGRCNRGERCPYIHDPEKVAVCTR---FVRGTCKK--TDGTCP 716
R K E C + G C GE+C + H ++ TR + C+ T G CP
Sbjct: 149 INSTRYKT-ELCRPFEESGTCKYGEKCQFAHGFHELRSLTRHPKYKTELCRTFHTIGFCP 207
Query: 717 FSHHVSKEKMPVCSYFLKGICSNSNCPYSHVYVSRKAEVCSDFLKGYCPLGAKCKKKHTL 776
+ P C +F+ P +A D L P + K H+L
Sbjct: 208 YG--------PRC-HFIHNADERRPAPSGGASGDLRAFGTRDALHLGFPREPRPKLHHSL 258
Query: 777 LCPDFARRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDATARSRVSASHGPRKPSAS 836
F P G L S + T P P S A++ S S++ SA+
Sbjct: 259 SFSGFPSGHHQPPGG----LESPLLLDSPTSRTPPPPSCSSASSCS--SSASSCSSASAA 312
Query: 837 QRPTRQTPSSAALTAAAVAAPPHCPGGS---ASPSSSKASSSSSSSSSPPASLDHEAPSL 893
P+ A+ AAA AA + GG+ +P + A+ SS+S ++ + E SL
Sbjct: 313 STPSGAPTCCASAAAAAAAALLYGTGGAEDLLAPGAPCAACSSASCANNAFAFGPELSSL 372
Query: 894 ---------QEAALAAACSNRLCKLPSFISLQSSPSPGAQPRVRAPRAP 933
AA+AAA R S Q G P + P P
Sbjct: 373 ITPLAIQTHNFAAVAAAAYYR--------SQQQQQQQGLAPPAQPPAPP 413
>gi|197276600 microtubule-associated protein 4 isoform 4 [Homo
sapiens]
Length = 1135
Score = 52.0 bits (123), Expect = 3e-06
Identities = 95/408 (23%), Positives = 146/408 (35%), Gaps = 66/408 (16%)
Query: 162 GEGEPPRGQLQPSRPTRARGTCSV---EDPLL--VCQKEP--GKPRMVKSVGSVGDSPRE 214
G+ P + P T CS+ ED +L + +++P +P + S S P E
Sbjct: 614 GQSAAPTFMISPETVTGTGKKCSLPAEEDSVLEKLGERKPCNSQPSELSSETSGIARPEE 673
Query: 215 PRRTVSESVIAVKASFPSSALPPRTGVALGRKLGSHSVASCAPQLLGDRRVDAGHTDQPV 274
R VS + + P+ LPP +++ T QP
Sbjct: 674 GRPVVSGTGNDITTP-PNKELPPSP----------------------EKKTKPLATTQPA 710
Query: 275 PSGSVGGPARPASGPRQAREASLVVTCRTNKFRKNNYKWVAASSKSPRVARRALSPRVAA 334
+ + +P S P+Q + + +K P L P
Sbjct: 711 KTSTSKAKTQPTSLPKQPAPTT-----------------IGGLNKKPMSLASGLVPAAPP 753
Query: 335 ENVCKASAG---MANKVEKPQLIADPEPKPRKPATSSKPGSAPSKYKWKASSPSASSSSS 391
+ ASA + +K KP+ IAD + P K A+ SKP SAP+ S S S S
Sbjct: 754 KRPAVASARPSILPSKDVKPKPIADAKA-PEKRASPSKPASAPA---------SRSGSKS 803
Query: 392 FRWQSEASSKDHASQLSPVLSRSPSGDRPAVGHSGLKPLSGETPLSAYKVKSRTKIIRRR 451
+ ++ ++ + P SRSPS P + +K + KS + R
Sbjct: 804 TQTVAKTTTAAAVASTGP-SSRSPSTLLPK-KPTAIKTEGKPAEVKKMTAKSVPADLSRP 861
Query: 452 SSTSLPGDKK----SGTSPAATAKSHLSLRRRQALRGKSSPVLKKTPNKGLVQVTTHRLC 507
STS KK SGT+PAA R ++P + K P TT RL
Sbjct: 862 KSTSTSSMKKTTTLSGTAPAAGVVPSRVKATPMPSRPSTTPFIDKKPTSAKPSSTTPRLS 921
Query: 508 RLPPSRAHLPTKEASSLHAVRTAPTSKVIKTRYRIVKKTPASPLSAPP 555
RL + + K S + R ++ KKT A+ + P
Sbjct: 922 RLATNTSAPDLKNVRSKVGSTENIKHQPGGGRAKVEKKTEAAATTRKP 969
Score = 37.0 bits (84), Expect = 0.087
Identities = 62/295 (21%), Positives = 102/295 (34%), Gaps = 43/295 (14%)
Query: 124 VIKVKPPSKSGSASASGAQRGSLEEFEETPWSDQRPREGEGEPPRGQLQPSRPTRARGTC 183
++ PP + ASA + S ++ + P +D + E P + P+ + ++ T
Sbjct: 747 LVPAAPPKRPAVASARPSILPS-KDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQ 805
Query: 184 SVEDPLLVCQKEPGKPRMVKSVGSVGDSPREPRRTVSESVIAVKASFPSSALPPRTGVAL 243
+V K +V S G S R P + + A+K + + T ++
Sbjct: 806 TV-----------AKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPAEVKKMTAKSV 854
Query: 244 GRKLGSHSVASCAPQLLGDRRVDAGHTDQPVPSGSVGGPARPASG--PRQAREASLVVTC 301
L R + T + ++ G A PA+G P + + +
Sbjct: 855 PADLS---------------RPKSTSTSSMKKTTTLSGTA-PAAGVVPSRVKATPMPSRP 898
Query: 302 RTNKFRKNNYKWVAASSKSPRVARRALSPRV-----------AAENVCKASAGMANKVEK 350
T F SS +PR++R A + + EN+ G KVEK
Sbjct: 899 STTPFIDKKPTSAKPSSTTPRLSRLATNTSAPDLKNVRSKVGSTENIKHQPGGGRAKVEK 958
Query: 351 PQLIADPEPKPRKPATSSKPGSAPSKYKWKASSPSASSS--SSFRWQSEASSKDH 403
A KP A + G S K A S S QS+ SKD+
Sbjct: 959 KTEAAATTRKPESNAVTKTAGPIASAQKQPAGKVQIVSKKVSYSHIQSKCGSKDN 1013
Score = 31.2 bits (69), Expect = 4.8
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 7/133 (5%)
Query: 811 PAPGPSDATARSRVSASHG------PRKPS-ASQRPTRQTPSSAALTAAAVAAPPHCPGG 863
PAP + +S + G P++P+ AS RP+ A A P
Sbjct: 728 PAPTTIGGLNKKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRAS 787
Query: 864 SASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSSPSPGA 923
+ P+S+ AS S S S+ A A + + S L K P+ I + P+
Sbjct: 788 PSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPAEVK 847
Query: 924 QPRVRAPRAPLTK 936
+ ++ A L++
Sbjct: 848 KMTAKSVPADLSR 860
>gi|47519639 microtubule-associated protein 4 isoform 1 [Homo
sapiens]
Length = 1152
Score = 52.0 bits (123), Expect = 3e-06
Identities = 95/408 (23%), Positives = 146/408 (35%), Gaps = 66/408 (16%)
Query: 162 GEGEPPRGQLQPSRPTRARGTCSV---EDPLL--VCQKEP--GKPRMVKSVGSVGDSPRE 214
G+ P + P T CS+ ED +L + +++P +P + S S P E
Sbjct: 614 GQSAAPTFMISPETVTGTGKKCSLPAEEDSVLEKLGERKPCNSQPSELSSETSGIARPEE 673
Query: 215 PRRTVSESVIAVKASFPSSALPPRTGVALGRKLGSHSVASCAPQLLGDRRVDAGHTDQPV 274
R VS + + P+ LPP +++ T QP
Sbjct: 674 GRPVVSGTGNDITTP-PNKELPPSP----------------------EKKTKPLATTQPA 710
Query: 275 PSGSVGGPARPASGPRQAREASLVVTCRTNKFRKNNYKWVAASSKSPRVARRALSPRVAA 334
+ + +P S P+Q + + +K P L P
Sbjct: 711 KTSTSKAKTQPTSLPKQPAPTT-----------------IGGLNKKPMSLASGLVPAAPP 753
Query: 335 ENVCKASAG---MANKVEKPQLIADPEPKPRKPATSSKPGSAPSKYKWKASSPSASSSSS 391
+ ASA + +K KP+ IAD + P K A+ SKP SAP+ S S S S
Sbjct: 754 KRPAVASARPSILPSKDVKPKPIADAKA-PEKRASPSKPASAPA---------SRSGSKS 803
Query: 392 FRWQSEASSKDHASQLSPVLSRSPSGDRPAVGHSGLKPLSGETPLSAYKVKSRTKIIRRR 451
+ ++ ++ + P SRSPS P + +K + KS + R
Sbjct: 804 TQTVAKTTTAAAVASTGP-SSRSPSTLLPK-KPTAIKTEGKPAEVKKMTAKSVPADLSRP 861
Query: 452 SSTSLPGDKK----SGTSPAATAKSHLSLRRRQALRGKSSPVLKKTPNKGLVQVTTHRLC 507
STS KK SGT+PAA R ++P + K P TT RL
Sbjct: 862 KSTSTSSMKKTTTLSGTAPAAGVVPSRVKATPMPSRPSTTPFIDKKPTSAKPSSTTPRLS 921
Query: 508 RLPPSRAHLPTKEASSLHAVRTAPTSKVIKTRYRIVKKTPASPLSAPP 555
RL + + K S + R ++ KKT A+ + P
Sbjct: 922 RLATNTSAPDLKNVRSKVGSTENIKHQPGGGRAKVEKKTEAAATTRKP 969
Score = 37.0 bits (84), Expect = 0.087
Identities = 62/295 (21%), Positives = 102/295 (34%), Gaps = 43/295 (14%)
Query: 124 VIKVKPPSKSGSASASGAQRGSLEEFEETPWSDQRPREGEGEPPRGQLQPSRPTRARGTC 183
++ PP + ASA + S ++ + P +D + E P + P+ + ++ T
Sbjct: 747 LVPAAPPKRPAVASARPSILPS-KDVKPKPIADAKAPEKRASPSKPASAPASRSGSKSTQ 805
Query: 184 SVEDPLLVCQKEPGKPRMVKSVGSVGDSPREPRRTVSESVIAVKASFPSSALPPRTGVAL 243
+V K +V S G S R P + + A+K + + T ++
Sbjct: 806 TV-----------AKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPAEVKKMTAKSV 854
Query: 244 GRKLGSHSVASCAPQLLGDRRVDAGHTDQPVPSGSVGGPARPASG--PRQAREASLVVTC 301
L R + T + ++ G A PA+G P + + +
Sbjct: 855 PADLS---------------RPKSTSTSSMKKTTTLSGTA-PAAGVVPSRVKATPMPSRP 898
Query: 302 RTNKFRKNNYKWVAASSKSPRVARRALSPRV-----------AAENVCKASAGMANKVEK 350
T F SS +PR++R A + + EN+ G KVEK
Sbjct: 899 STTPFIDKKPTSAKPSSTTPRLSRLATNTSAPDLKNVRSKVGSTENIKHQPGGGRAKVEK 958
Query: 351 PQLIADPEPKPRKPATSSKPGSAPSKYKWKASSPSASSS--SSFRWQSEASSKDH 403
A KP A + G S K A S S QS+ SKD+
Sbjct: 959 KTEAAATTRKPESNAVTKTAGPIASAQKQPAGKVQIVSKKVSYSHIQSKCGSKDN 1013
Score = 31.2 bits (69), Expect = 4.8
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 7/133 (5%)
Query: 811 PAPGPSDATARSRVSASHG------PRKPS-ASQRPTRQTPSSAALTAAAVAAPPHCPGG 863
PAP + +S + G P++P+ AS RP+ A A P
Sbjct: 728 PAPTTIGGLNKKPMSLASGLVPAAPPKRPAVASARPSILPSKDVKPKPIADAKAPEKRAS 787
Query: 864 SASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSSPSPGA 923
+ P+S+ AS S S S+ A A + + S L K P+ I + P+
Sbjct: 788 PSKPASAPASRSGSKSTQTVAKTTTAAAVASTGPSSRSPSTLLPKKPTAIKTEGKPAEVK 847
Query: 924 QPRVRAPRAPLTK 936
+ ++ A L++
Sbjct: 848 KMTAKSVPADLSR 860
>gi|4507961 zinc finger protein 36, C3H type, homolog [Homo sapiens]
Length = 326
Score = 51.6 bits (122), Expect = 3e-06
Identities = 51/170 (30%), Positives = 67/170 (39%), Gaps = 47/170 (27%)
Query: 752 KAEVCSDFLK-GYCPLGAKCKKKHTL---------------LCPDFARRGACPRGAQCQL 795
K E+C F + G C GAKC+ H L LC F +G CP G++C
Sbjct: 105 KTELCRTFSESGRCRYGAKCQFAHGLGELRQANRHPKYKTELCHKFYLQGRCPYGSRCHF 164
Query: 796 LHRTQKRHSRRAATSPAPGPSDATARSRVSASHGPRKPSASQRPTRQTPSSAALTAAAVA 855
+H PS+ A + H P RQ+ S + L +
Sbjct: 165 IH----------------NPSEDLA----APGHPP--------VLRQSISFSGLPSGRRT 196
Query: 856 APPHCPGGSASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAAACSNR 905
+PP P G A PS S +S S SSS PP L +PS AA + R
Sbjct: 197 SPP--PPGLAGPSLSSSSFSPSSSPPPPGDLP-LSPSAFSAAPGTPLARR 243
Score = 35.4 bits (80), Expect = 0.25
Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 615 KLSKTSGQPSDAGSRP------LLRTGRLDPAGSCSRSLASRAVQRSLAIIRQARQRREK 668
+LS + P+ + P L RT +G C R A L +RQA + +
Sbjct: 86 ELSPSPTSPTATSTTPSRYKTELCRT--FSESGRC-RYGAKCQFAHGLGELRQANRHPKY 142
Query: 669 RKEYCMYYNRFGRCNRGERCPYIHDPEK 696
+ E C + GRC G RC +IH+P +
Sbjct: 143 KTELCHKFYLQGRCPYGSRCHFIHNPSE 170
>gi|126723060 zinc finger CCCH-type containing 4 [Homo sapiens]
Length = 1303
Score = 51.2 bits (121), Expect = 4e-06
Identities = 41/181 (22%), Positives = 66/181 (36%), Gaps = 12/181 (6%)
Query: 706 GTCKKTDGTCPFSHHVSKEKMPVCSYFLKGICS-NSNCPYSH-VYVSRKAEVCSDFLKGY 763
G+ + D P K K+ +C YF++G C+ +C +SH + + +K E+C ++ G+
Sbjct: 374 GSYRSRDHDKPHQQSDKKGKV-ICKYFVEGRCTWGDHCNFSHDIELPKKRELCKFYITGF 432
Query: 764 CPLGAKCKKKH-TLLCPDFARRGACPRGAQCQLLHRTQKRHSRRAATSPAPGPSDATARS 822
C C H C + G C G C H +R ++A A
Sbjct: 433 CARAENCPYMHGDFPCKLYHTTGNCINGDDCMFSHDPLTEETRELLDKMLADDAEAGAED 492
Query: 823 RVSASHGPRKPSASQRPTRQTPSSAALTAAAVAAPPHCPGGSASPSSSKASSSSSSSSSP 882
++ P + P L + PP PG A P+S P
Sbjct: 493 EKEVEELKKQ---GINPLPKPPPGVGL----LPTPPRPPGPQA-PTSPNGRPMQGGPPPP 544
Query: 883 P 883
P
Sbjct: 545 P 545
Score = 47.0 bits (110), Expect = 8e-05
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 11/116 (9%)
Query: 663 RQRREKRKEYCMYYNRFGRCNRGERCPYIHD---PEKVAVCTRFVRGTCKKTDGTCPFSH 719
+Q +K K C Y+ GRC G+ C + HD P+K +C ++ G C + + CP+ H
Sbjct: 386 QQSDKKGKVICKYFVE-GRCTWGDHCNFSHDIELPKKRELCKFYITGFCARAE-NCPYMH 443
Query: 720 HVSKEKMPVCSYFLKGICSN-SNCPYSHVYVSRKA-EVCSDFLKGYCPLGAKCKKK 773
P Y G C N +C +SH ++ + E+ L GA+ +K+
Sbjct: 444 ----GDFPCKLYHTTGNCINGDDCMFSHDPLTEETRELLDKMLADDAEAGAEDEKE 495
Score = 39.7 bits (91), Expect = 0.013
Identities = 38/124 (30%), Positives = 50/124 (40%), Gaps = 16/124 (12%)
Query: 809 TSPAPGPSDATARSRVSASHGPRKPSASQRPTRQTPSSAALTAAAVAAPPHCPGGSASPS 868
+S APG SD + RV + P P Q+PT T SS A A P P +ASPS
Sbjct: 1058 SSAAPGSSDKPSDPRVRKA--PTDPRL-QKPTDSTASSRA----AKPGPAEAPSPTASPS 1110
Query: 869 SSKASSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSSPSPGAQPRVR 928
+SPPA+ ++ L L + S ISL +P A +
Sbjct: 1111 GD---------ASPPATAPYDPRVLAAGGLGQGGGGGQSSVLSGISLYDPRTPNAGGKAT 1161
Query: 929 APRA 932
P A
Sbjct: 1162 EPAA 1165
>gi|118766347 zinc finger CCCH-type domain containing 6 [Homo
sapiens]
Length = 1189
Score = 51.2 bits (121), Expect = 4e-06
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 719 HHVSKEKMPVCSYFLKGIC-SNSNCPYSH-VYVSRKAEVCSDFLKGYCPLGAKCKKKHTL 776
H V + +C YFL+G C C + H + ++ E+C +L+GYC G C H
Sbjct: 268 HTVEHKGKQICKYFLEGRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGENCIYMHNE 327
Query: 777 LCPDFARRGA-CPRGAQCQLLHRTQKRHSRR 806
F GA C +G C+ H + +++
Sbjct: 328 FPCKFYHSGAKCYQGDNCKFSHDDLTKETKK 358
Score = 42.7 bits (99), Expect = 0.002
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 12/96 (12%)
Query: 668 KRKEYCMYYNRFGRCNRGERCPYIHDPE---KVAVCTRFVRGTCKKTDGTCPFSHHVSKE 724
K K+ C Y+ GRC +G++C + HD E + +C +++G C K + C + H+
Sbjct: 273 KGKQICKYFLE-GRCIKGDQCKFDHDAELEKRKEICKFYLQGYCTKGE-NCIYMHN---- 326
Query: 725 KMPVCSYFLKG--ICSNSNCPYSHVYVSRKAEVCSD 758
+ P C ++ G NC +SH ++++ + D
Sbjct: 327 EFP-CKFYHSGAKCYQGDNCKFSHDDLTKETKKLLD 361
Score = 36.6 bits (83), Expect = 0.11
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 4/53 (7%)
Query: 667 EKRKEYCMYYNRFGRCNRGERCPYIHDPEKVAVCTRFVRGTCKKTDGTCPFSH 719
EKRKE C +Y + G C +GE C Y+H+ C + G C FSH
Sbjct: 301 EKRKEICKFYLQ-GYCTKGENCIYMHNE---FPCKFYHSGAKCYQGDNCKFSH 349
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 50.1 bits (118), Expect = 1e-05
Identities = 87/397 (21%), Positives = 141/397 (35%), Gaps = 36/397 (9%)
Query: 179 ARGTCSVEDPLLVCQKEPGKPR--------MVKSVGSVGDSPREPRRTVSESVIAVKASF 230
A T + P L+ + PG PR ++ +G+ G R+P + + A+
Sbjct: 13 AARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGG--ATI 70
Query: 231 PSSALPPRTGVALGRKLGSHSVASCAPQLLGDRRVDAGHTDQPVPSGSVG---GPARPAS 287
P SA PR G S + AS P R P P S G G RP
Sbjct: 71 PESA--PRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGP 128
Query: 288 GPRQAREASLVVTCRTNKFRKNNYKWVAASSKSPRVARRALSPRVAAENVCKASAGMANK 347
++ S T K + + +A S R +P + + + S +
Sbjct: 129 LGQKGLRISAEETVARGKATEAPKR--SALSAGARRDTSGPTPGTPSPAMARRSRAAGTE 186
Query: 348 VEKPQLIADPEPKPRKPATSSKPG-SAPSKYKWKASSPSASSS-SSFRWQSEASSKDHAS 405
V P+ P +PR P + S+ S++ SP+A S+ +S+ +S
Sbjct: 187 VGLPR--PAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSS 244
Query: 406 QLSPVLSRSPSGDRPAVGHSGLKPLSGETPLSAYKVKSRTKIIRRRSSTSLPGDKKSGTS 465
+P+ S + SG P+ + P P R + + P +S
Sbjct: 245 SATPLSSPARSG--PSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSS 302
Query: 466 PAATAKSHLSLRRRQALRGKSSPVLKKTPNKGLVQVTTHRLCRL-------PPSRAHLPT 518
P AT AL+ ++ P L TP+ + L PPS LP+
Sbjct: 303 PLATPSPSA------ALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPS 356
Query: 519 KEASSLHAVRTAPTSKVIKTRYRIVKKTPASPLSAPP 555
A+ T+ S ++ + + P SPL+ PP
Sbjct: 357 PPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPP 393
Score = 43.5 bits (101), Expect = 0.001
Identities = 42/139 (30%), Positives = 63/139 (45%), Gaps = 11/139 (7%)
Query: 801 KRHSRRAATSPAPGPSDATARSRVSASHGPRKPSASQRPTRQTPSSAALTAAAVAAPPHC 860
+R + R+ +S A P + ARS SA PR P+ P++ P PP
Sbjct: 235 QRPASRSLSSSAT-PLSSPARSGPSARGTPRAPA---HPSQPKPKGLQALRPPQVTPPR- 289
Query: 861 PGGSASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSSPS 920
A+P+ SSS ++ SP A+L +AP A S+ C+L + + L + PS
Sbjct: 290 --KDAAPALGPLSSSPLATPSPSAALQSQAPPTLPA--TPHSSSLTCQLATPLPL-APPS 344
Query: 921 PGAQPRVRA-PRAPLTKDS 938
P A P ++ P P T S
Sbjct: 345 PSAPPSLQTLPSPPATPPS 363
Score = 42.0 bits (97), Expect = 0.003
Identities = 41/136 (30%), Positives = 55/136 (40%), Gaps = 14/136 (10%)
Query: 807 AATSPAPGPSDATARSRVSASHGPRKP--SASQRPTRQTPSSAALTAAAVAAPP-HCPGG 863
+AT P+ P A P P S S P Q P A +A PP P
Sbjct: 463 SATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPA 522
Query: 864 SASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAAA-CSNRLCKLPSFIS---LQSSP 919
A+P + SPPAS +AP A+L + + + P ++ LQ P
Sbjct: 523 LATPPLQ-------ALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPP 575
Query: 920 SPGAQPRVRAPRAPLT 935
SP A P ++APR P T
Sbjct: 576 SPPASPTLQAPRRPPT 591
Score = 38.9 bits (89), Expect = 0.023
Identities = 45/150 (30%), Positives = 62/150 (41%), Gaps = 24/150 (16%)
Query: 804 SRRAATSPAPG-PSDATAR-SRVSASHG--PRK-PSASQRPTRQTPSSAALTAAAVAAPP 858
+RR + P PG PS A AR SR + + PR PSA RP + P + +A+ +
Sbjct: 160 ARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTE 219
Query: 859 HCPGGSASPSSS-----KASSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFI 913
P PS+ AS S SSS++P +S PS + A A
Sbjct: 220 PSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPA------------ 267
Query: 914 SLQSSPSPGAQPRVRAPR-APLTKDSGKPL 942
S P P +R P+ P KD+ L
Sbjct: 268 -HPSQPKPKGLQALRPPQVTPPRKDAAPAL 296
Score = 35.4 bits (80), Expect = 0.25
Identities = 39/146 (26%), Positives = 54/146 (36%), Gaps = 4/146 (2%)
Query: 799 TQKRHSRRAATSPAPGPSDATARSRVSASHGPRKPSASQRPTRQTPSSAALTAAAVAAPP 858
+Q S A P A+ SA+ P+ P P Q A+A PP
Sbjct: 468 SQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPP 527
Query: 859 --HCPGGSAS-PSSSKASSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISL 915
P AS P + S S+S SP A+ +AP + A L + P+ +
Sbjct: 528 LQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPAS-PTLQAP 586
Query: 916 QSSPSPGAQPRVRAPRAPLTKDSGKP 941
+ P+PG V PR L G P
Sbjct: 587 RRPPTPGPDTSVSGPRLTLALAPGPP 612
Score = 31.2 bits (69), Expect = 4.8
Identities = 38/135 (28%), Positives = 51/135 (37%), Gaps = 16/135 (11%)
Query: 808 ATSPAPGPSDATARSRVSASHGPRKPSASQ--RPTRQTPSSAA--LTAAAVAAPPHCP-- 861
AT P P + P P S P+ Q P++ A L A + PP P
Sbjct: 390 ATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQ 449
Query: 862 GGSASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSSPSP 921
+ P+S S S++ S P SL AP LQ A +S ++P P
Sbjct: 450 APFSPPASPPVSPSATPPSQAPPSL--AAPPLQVPPSPPASPP--------MSPSATPPP 499
Query: 922 GAQPRVRAPRAPLTK 936
A P + AP L K
Sbjct: 500 QAPPPLAAPPLQLAK 514
Score = 31.2 bits (69), Expect = 4.8
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 3/67 (4%)
Query: 811 PAPGPSDATARSRVS---ASHGPRKPSASQRPTRQTPSSAALTAAAVAAPPHCPGGSASP 867
P PGP + + R++ A P PS S T P A +++A + P G + P
Sbjct: 590 PTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGP 649
Query: 868 SSSKASS 874
A+S
Sbjct: 650 EGGAAAS 656
>gi|150170699 kinesin family member 26A [Homo sapiens]
Length = 1882
Score = 50.1 bits (118), Expect = 1e-05
Identities = 126/499 (25%), Positives = 177/499 (35%), Gaps = 103/499 (20%)
Query: 42 PTYHSGRAFSARY-PRPSRRGYSSHHGPSWRKKYSLVNRPPGPSDPPADHAVRPLH-GA- 98
PT G A A + PRPS G + P+ +K SL R S PP HAV P GA
Sbjct: 1340 PTSKKGLAPKAGFLPRPS--GAAPPAPPT--RKSSLEQRSSPASAPP--HAVNPARVGAA 1393
Query: 99 ---RGGQPPVPQQHVLERQVQLSQGQNVVIKVKPPSKSGSASASGAQR----GSLEEFEE 151
RG + P P S+ + V + K+ ++ A R SLE +E
Sbjct: 1394 AVLRGEEEPRPS----------SRADHSVPRATSSLKARASKVEAAHRLAGHASLERYEG 1443
Query: 152 TPWSDQRPREGEGEPPRG----QLQPSRPTRARG-TCSVEDPLLVCQKEP----GKPRMV 202
S + RE G PPR + PS PT C V +P GK R +
Sbjct: 1444 LAHSSSKGREAPGRPPRAVPKLGVPPSSPTHGPAPACRSGAAKAVGAPKPPVGGGKGRGL 1503
Query: 203 KSVGSVGDSPREPRRTVSESVIAVKASFPSSALPPRTGVALGRKLGSHSV---------- 252
+ GS P T S + + PR G ++G K G +V
Sbjct: 1504 VAGGSRALGPSVKLSTASVTGRSPGGPVAGPRAAPRAGPSVGAKAGRGTVMGTKQALRAA 1563
Query: 253 --------ASCAP----QLLGDRRVDAGHTDQPVPSGSVGGPARPASGPRQAREASLVVT 300
AS AP G D+GH SG G RP +GP S V
Sbjct: 1564 HSRVHELSASGAPGRGGSSWGSADSDSGH-----DSGVNVGEERPPTGPALPSPYSKVTA 1618
Query: 301 CRTNKFRKNNYKWVAASSKSPRVARRALSPRVAAENVCKASAGMANKVEKPQLIADPEPK 360
R R Y S S V L P + + S G + E
Sbjct: 1619 PR----RPQRYSSGHGSDNS-SVLSGELPPAMGRTALFHHSGGSSGY----------ESL 1663
Query: 361 PRKPATSSKPGSAPSKYKWKASSPSASSSSSFRWQSEASSKDHASQL-------SPVLSR 413
R + SAP + S S ++S R +S S K A+ L +P+
Sbjct: 1664 RRDSEATGSASSAPD-----SMSESGAASPGARTRSLKSPKKRATGLQRRRLIPAPLPDT 1718
Query: 414 SPSGDRPAVGHSGL---KPLSGET----PLSAYKVKSRTKIIRRRSSTSLPGDKKSGTSP 466
+ G +P++ + PL+G + Y++ ++ R R P +++ T
Sbjct: 1719 TALGRKPSLPGQWVDLPPPLAGSLKEPFEIKVYEIDDVERLQRPR-----PTPREAPTQG 1773
Query: 467 AATAKSHLSL--RRRQALR 483
A + L L RR+Q LR
Sbjct: 1774 LACVSTRLRLAERRQQRLR 1792
>gi|30315649 muscleblind-like 3 isoform R [Homo sapiens]
Length = 334
Score = 49.7 bits (117), Expect = 1e-05
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 699 VCTRFVRGTCKKTDGTCPFSH-----HVSKEKMPVCSYFLKGICSNSNCPYSH 746
VC F RGTC + D C F+H HV ++ C LKG C+ NC Y H
Sbjct: 19 VCREFQRGTCSRADADCKFAHPPRVCHVENGRVVACFDSLKGRCTRENCKYLH 71
Score = 44.3 bits (103), Expect = 5e-04
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 689 PYIHDPEKVAVCTRFVRGTCKKTDGTCPFSH-------HVSKEKMPVCSYFLKGICSNSN 741
P + +K+ VC F RG C + + C ++H S + +C ++KG CS
Sbjct: 169 PKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTDASMIEASDNTVTICMDYIKGRCSREK 228
Query: 742 CPYSH 746
C Y H
Sbjct: 229 CKYFH 233
>gi|19387844 muscleblind-like 3 isoform G [Homo sapiens]
Length = 354
Score = 49.7 bits (117), Expect = 1e-05
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 5/53 (9%)
Query: 699 VCTRFVRGTCKKTDGTCPFSH-----HVSKEKMPVCSYFLKGICSNSNCPYSH 746
VC F RGTC + D C F+H HV ++ C LKG C+ NC Y H
Sbjct: 19 VCREFQRGTCSRADADCKFAHPPRVCHVENGRVVACFDSLKGRCTRENCKYLH 71
Score = 44.3 bits (103), Expect = 5e-04
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 689 PYIHDPEKVAVCTRFVRGTCKKTDGTCPFSH-------HVSKEKMPVCSYFLKGICSNSN 741
P + +K+ VC F RG C + + C ++H S + +C ++KG CS
Sbjct: 169 PKLMRSDKLEVCREFQRGNCTRGENDCRYAHPTDASMIEASDNTVTICMDYIKGRCSREK 228
Query: 742 CPYSH 746
C Y H
Sbjct: 229 CKYFH 233
Score = 32.7 bits (73), Expect = 1.6
Identities = 42/176 (23%), Positives = 68/176 (38%), Gaps = 35/176 (19%)
Query: 750 SRKAEVCSDFLKGYCPLGAK-CKKKH-------------TLLCPDFARRGACPRGAQCQL 795
S K EVC +F +G C G C+ H +C D+ +G C R +C+
Sbjct: 174 SDKLEVCREFQRGNCTRGENDCRYAHPTDASMIEASDNTVTICMDYI-KGRCSR-EKCKY 231
Query: 796 LHRTQKRHSRRAATSPAPGPSDATARS-RVSASHGPRKPSASQRPTRQTP--------SS 846
H +R A S A+A + + K SA ++P TP
Sbjct: 232 FHPPAHLQARLKAAHHQMNHSAASAMALQPGTLQLIPKRSALEKPNGATPVFNPTVFHCQ 291
Query: 847 AALTAAAVAAPPHCPGG---SASPSSS-------KASSSSSSSSSPPASLDHEAPS 892
ALT + P P G +P+S+ ++ S++++P S+ AP+
Sbjct: 292 QALTNLQLPQPAFIPAGPILCMAPASNIVPMMHGATPTTVSAATTPATSVPFAAPT 347
>gi|253970412 G-2 and S-phase expressed 1 [Homo sapiens]
Length = 739
Score = 47.4 bits (111), Expect = 6e-05
Identities = 98/415 (23%), Positives = 150/415 (36%), Gaps = 65/415 (15%)
Query: 193 QKEPGK----PRMVKSVG-SVGDSPREPRRTVSES-----VIAVKAS----FPSSALPPR 238
Q++PG PR G S+ + +P++ + S + A K S P P
Sbjct: 228 QRKPGTKLLLPRAASVRGRSIPGAAEKPKKEIPASPSRTKIPAEKESHRDVLPDKPAPGA 287
Query: 239 TGV-ALGRKLGSHSVASCAPQLLGDRRVDAGHTDQPVPSGSVGGPARPASGPRQAREASL 297
V A G LG A P LG ++ T P + + +SGP + +S
Sbjct: 288 VNVPAAGSHLGQGKRAIPVPNKLGLKK-----TLLKAPGSTSNLARKSSSGPVWSGASSA 342
Query: 298 VVTCRTNKFRKNNYKWVAASS--------KSPRVARRALSPRVAAENVCKASAGMANKVE 349
+ K + + + + A+S KS R+ L P + A V AS+ A +V+
Sbjct: 343 CTSPAVGKAKSSEFASIPANSSRPLSNISKSGRMGPAMLRPALPAGPV-GASSWQAKRVD 401
Query: 350 -----KPQLIADPEPKPRKPATSSKPGS-APSKYKWKASSPSASSSSSFRWQSEASSK-- 401
QL A P P +P T G S W SS + S R S +SK
Sbjct: 402 VSELAAEQLTAPPSASPTQPQTPEGGGQWLNSSCAWSESSQLNKTRSIRRRDSCLNSKTK 461
Query: 402 -----------------DHASQLSPVLSRSP------SGDRPAVGHSGLKPLSGETP--- 435
D +P LSR+ S R V + ++ SG P
Sbjct: 462 VMPTPTNQFKIPKFSIGDSPDSSTPKLSRAQRPQSCTSVGRVTVHSTPVRRSSGPAPQSL 521
Query: 436 LSAYKVKSRTKIIRRRSSTSLPGDKKSGTSPAATAKSHLSLRRRQALRGKSSPVLKKTPN 495
LSA +V + RR S P K T P A RR++ + + ++ P
Sbjct: 522 LSARRVSALPTPASRRCSGLPPMTPK--TMPRAVGSPLCVPARRRSSEPRKNSAMRTEPT 579
Query: 496 KGLVQVTTHRLCRLPPSRAHLPTKEASSLHAVRTAPTSKVIKTRYRIVKKTPASP 550
+ + T RL + P R P++ +L+ S K+ V + A P
Sbjct: 580 RESNRKTDSRLVDVSPDRGSPPSRVPQALNFSPEESDSTFSKSTATEVAREEAKP 634
Score = 33.1 bits (74), Expect = 1.3
Identities = 78/333 (23%), Positives = 120/333 (36%), Gaps = 49/333 (14%)
Query: 283 ARPASGPRQAREASLVVTCRTNKFRKNNYKWVAASSKSPRVARRALSPRVAAENVCKASA 342
A A+ P R + + +K + N ++ KSP +R S
Sbjct: 120 AAQAAKPEDPRSQGVERFIQESKLKINLFEKEKEMKKSPTSLKRETY-------YLSDSP 172
Query: 343 GMANKVEKPQLIADPEPKPRKPATSS---KPGSAPSKYKWKASSPSASSSSSFRWQSEAS 399
+ V +P+L+A P A + PG S + S +A ++S Q +
Sbjct: 173 LLGPPVGEPRLLASSPALPSSGAQARLTRAPGPPHSAHALPRESCTAHAASQAATQRKPG 232
Query: 400 SKDHASQLSPVLSRSPSGDRPAVGHSGLKPLSGETPLSAYKVKSRTKIIRRRSSTS--LP 457
+K + + V RS G + KP E P S SRTKI + S LP
Sbjct: 233 TKLLLPRAASVRGRSIPG-------AAEKPKK-EIPASP----SRTKIPAEKESHRDVLP 280
Query: 458 GDKKSGTSPAATAKSHLSLRRRQALRGKSSPVLKKTPNKGLVQVTTHRLCR--------- 508
G A SHL +R A+ + LKKT K +T L R
Sbjct: 281 DKPAPGAVNVPAAGSHLGQGKR-AIPVPNKLGLKKTLLKA--PGSTSNLARKSSSGPVWS 337
Query: 509 ------LPPSRAHLPTKEASSLHAVRTAPTSKVIKT-RYRIVKKTPASPLSAPPFPLSLP 561
P+ + E +S+ A + P S + K+ R PA P P+
Sbjct: 338 GASSACTSPAVGKAKSSEFASIPANSSRPLSNISKSGRMGPAMLRPALPAG----PVGAS 393
Query: 562 SWRARRLSLSRSLVLNRLRPVASGGGKAQPGSP 594
SW+A+R+ +S P ++ QP +P
Sbjct: 394 SWQAKRVDVSELAAEQLTAPPSA--SPTQPQTP 424
>gi|46411180 muscleblind-like 2 isoform 3 [Homo sapiens]
Length = 361
Score = 47.4 bits (111), Expect = 6e-05
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 699 VCTRFVRGTCKKTDGTCPFSH-----HVSKEKMPVCSYFLKGICSNSNCPYSH 746
VC +F RGTC ++D C F+H V ++ C LKG CS NC Y H
Sbjct: 18 VCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGRCSRENCKYLH 70
Score = 42.4 bits (98), Expect = 0.002
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Query: 695 EKVAVCTRFVRGTCKKTDGTCPFSH-------HVSKEKMPVCSYFLKGICSNSNCPYSHV 747
+K+ VC F RG C + + C F+H S + VC ++KG C C Y H
Sbjct: 177 DKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHP 236
Query: 748 YVSRKAEV 755
+A++
Sbjct: 237 PAHLQAKI 244
>gi|21464125 muscleblind-like 2 isoform 1 [Homo sapiens]
Length = 367
Score = 47.4 bits (111), Expect = 6e-05
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 5/53 (9%)
Query: 699 VCTRFVRGTCKKTDGTCPFSH-----HVSKEKMPVCSYFLKGICSNSNCPYSH 746
VC +F RGTC ++D C F+H V ++ C LKG CS NC Y H
Sbjct: 18 VCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGRCSRENCKYLH 70
Score = 42.4 bits (98), Expect = 0.002
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
Query: 695 EKVAVCTRFVRGTCKKTDGTCPFSH-------HVSKEKMPVCSYFLKGICSNSNCPYSHV 747
+K+ VC F RG C + + C F+H S + VC ++KG C C Y H
Sbjct: 177 DKLEVCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHP 236
Query: 748 YVSRKAEV 755
+A++
Sbjct: 237 PAHLQAKI 244
>gi|237757310 synaptojanin 1 isoform a [Homo sapiens]
Length = 1612
Score = 47.0 bits (110), Expect = 8e-05
Identities = 66/275 (24%), Positives = 94/275 (34%), Gaps = 48/275 (17%)
Query: 157 QRPREGEGEPPRGQLQPSR-PTRARGTCSVEDPLLVCQ----------------KEPGKP 199
Q P EG P ++PSR P+R G S + + Q K P P
Sbjct: 1091 QSPTISEGPVPSLPIRPSRAPSRTPGPPSAQSSPIDAQPATPLPQKDPAQPLEPKRPPPP 1150
Query: 200 RMVKSVGSVGDSPREPRRTVSESVIAVKASFPSSALPPRTGVALGRKLGSHSVASCAPQL 259
R V R P + + S + F PP GVA R++ AP+
Sbjct: 1151 RPVAPPTRPAPPQRPPPPSGARSPAPTRKEFGGIGAPPSPGVAR-REME-------APKS 1202
Query: 260 LGDRRVDAGHTDQPVPSGSVGGP-------ARPASGPRQAREASLVVTCRTNKFR--KNN 310
G R D QP P + GP ARP PR ++ R + R +
Sbjct: 1203 PGTTRKDNIGRSQPSPQAGLAGPGPAGYSTARPTIPPRAGVISAPQSHARASAGRLTPES 1262
Query: 311 YKWVAASSKSPRVARRALSPRVA--------------AENVCKASAGMANKVEKPQLIAD 356
+ +SK L P+ A E + +A M +P L
Sbjct: 1263 QSKTSETSKGSTFLPEPLKPQAAFPPQSSLPPPAQRLQEPLVPVAAPMPQSGPQPNLETP 1322
Query: 357 PEPKPRKPATSSKPGSAPSKYKWKASSPSASSSSS 391
P+P PR ++ S P A S+ + K + S S
Sbjct: 1323 PQPPPRSRSSHSLPSEASSQPQVKTNGISDGKRES 1357
>gi|217416362 zinc finger CCCH-type containing 8 [Homo sapiens]
Length = 291
Score = 47.0 bits (110), Expect = 8e-05
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 719 HHVSKEKMPVCSYFLKGIC-SNSNCPYSH-VYVSRKAEVCSDFLKGYCPLGAKCKKKHTL 776
H V ++ +C YFL+ C C + H + +K E+C +++GYC G C H
Sbjct: 187 HTVERKGKQICKYFLERKCIKGDQCKFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNE 246
Query: 777 LCPDFARRGA-CPRGAQCQLLH 797
F G C +G C+ H
Sbjct: 247 YPCKFYHTGTKCYQGEYCKFSH 268
Score = 39.3 bits (90), Expect = 0.018
Identities = 42/170 (24%), Positives = 65/170 (38%), Gaps = 42/170 (24%)
Query: 615 KLSKTSGQPSDAGSRPLLRTGRLDPAGSCSRSLASRAVQRSL--AIIRQARQRREKRKEY 672
K+ + P + GS LLR +GS + Q+ L A I Q R K K+
Sbjct: 143 KMKRKWPGPGNKGSNALLRN-----SGSQEEDGKPKEKQQHLSQAFINQHTVER-KGKQI 196
Query: 673 CMYYNRFGRCNRGERCPYIHDPEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMPVCSYF 732
C Y+ +C +G++C + HD E ++K +C ++
Sbjct: 197 CKYFLE-RKCIKGDQCKFDHDAE--------------------------IEKKKEMCKFY 229
Query: 733 LKGICS-NSNCPYSHVYVSRKAEVCSDFLKG-YCPLGAKCKKKHTLLCPD 780
++G C+ NC Y H C + G C G CK H L P+
Sbjct: 230 VQGYCTRGENCLYLH-----NEYPCKFYHTGTKCYQGEYCKFSHAPLTPE 274
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 47.0 bits (110), Expect = 8e-05
Identities = 103/458 (22%), Positives = 158/458 (34%), Gaps = 74/458 (16%)
Query: 31 PGTPAASGWQPPTYHSGRAFSARYPRPSRRGYSSHHGPSWRKKYSLVNRPPGPSDPPADH 90
PG A P + A A+ P P ++ S H P+ + + +++PP + PPA
Sbjct: 1809 PGPRATPRKVAPPCLAQPAAPAKVPSPGQQRSRSLHRPAKTSELATLSQPPRSATPPARL 1868
Query: 91 AVRPLHGARGGQP---PVPQQH-VLERQVQLSQGQNVVIKVKPPSKSGSASASGAQRGSL 146
A P + P P+P++ + + G K P+++ A QR +
Sbjct: 1869 AKTPSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGASPVPKTPARTLLAKQHKTQRSPV 1928
Query: 147 EEFEETPWSDQRPREGEGEPPRGQLQPSRPTRAR--------------GTCSVEDPLLVC 192
P+ QRP G PP + P R R G V L
Sbjct: 1929 ----RIPFM-QRPAR-RGPPPLARAVPEPGPRGRAGTEAGPGARGGRLGLVRVASALSSG 1982
Query: 193 QKEPGKPRMVKSVGSVGDSPREPRRTVSESVIAVKASFPSSALPPRTGVALGRKLGSHSV 252
+ + + + + +SP RR S AS P A P R AL +V
Sbjct: 1983 SESSDRSGFRRQLTFIKESPGLRRRRSELSSAESAASAPQGASPRRGRPAL------PAV 2036
Query: 253 ASCAPQLLGDRRVDAGHTDQPVPSGSVGGPARPASGPRQAR----EASLVVTCRTNKFRK 308
C+ + + A P P+ ARP+ G R AR E+ + R R
Sbjct: 2037 FLCSSRC---EELRAAPRQGPAPARQRPPAARPSPGERPARRTTSESPSRLPVRAPAARP 2093
Query: 309 NNYK----------------WVAASSKSPRVARRALS------PRVAAENVCKASAGMAN 346
K V A+ S ARR+ PRVAA +
Sbjct: 2094 ETVKRYASLPHISVARRPDGAVPAAPASADAARRSSDGEPRPLPRVAAPG---TTWRRIR 2150
Query: 347 KVEKPQLIADPEPKPRKPATSSKPGSAPSKYKWKASSPSASSSSSFRWQSEASSKDHASQ 406
+ P ++ P P S P AP+ P +S + + + A+ K ++S
Sbjct: 2151 DEDVPHILRSTLPATALPLRGSTPEDAPA-----GPPPRKTSDAVVQTEEVAAPKTNSST 2205
Query: 407 LSPVLSRSPSGDRPAVGHSGL------KPLSGETPLSA 438
+ +R P G PA G L P + P+SA
Sbjct: 2206 SPSLETREPPG-APAGGQLSLLGSDVDGPSLAKAPISA 2242
Score = 37.7 bits (86), Expect = 0.051
Identities = 35/143 (24%), Positives = 51/143 (35%), Gaps = 10/143 (6%)
Query: 798 RTQKRHSRRAATSPAPGPSDATARSRVSASHGPRKPSA----------SQRPTRQTPSSA 847
R +KR + TS +P + R + P P+ S P Q +
Sbjct: 1750 RPEKRGAASVKTSGSPRSPAGPEKPRGTQKTTPGVPAVLRGRTVIYVPSPAPRAQPKGTP 1809
Query: 848 ALTAAAVAAPPHCPGGSASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLC 907
A P C A+P+ + S S + E +L + +A RL
Sbjct: 1810 GPRATPRKVAPPCLAQPAAPAKVPSPGQQRSRSLHRPAKTSELATLSQPPRSATPPARLA 1869
Query: 908 KLPSFISLQSSPSPGAQPRVRAP 930
K PS S Q+SP+ PR R P
Sbjct: 1870 KTPSSSSSQTSPASQPLPRKRPP 1892
Score = 30.4 bits (67), Expect = 8.2
Identities = 59/292 (20%), Positives = 104/292 (35%), Gaps = 23/292 (7%)
Query: 317 SSKSPRVARRALSPRVAAENVCKASAGMANKVEKPQLI------ADPEPKPRKPATSSKP 370
SS SPR A L +++ + + KP+ A+ + + A S
Sbjct: 1618 SSPSPRAAEELLQRCISSALPRRRPPVSGLRRRKPRATRLDERPAEGSRERGEEAAGSDR 1677
Query: 371 GSAPSKYKWKASSPSASSSSSFRWQSEASSKDHASQLSPVLS----RSPSGDRPAVGHSG 426
S +W+A A+S ++ Q+ A++++ +S+ +LS S H
Sbjct: 1678 ASDLDSVEWRAIQEGANSIVTWLHQAAAATREASSESDSILSFVSGLSVGSTLQPPKHRK 1737
Query: 427 LKPLSGETPLSAYKVKSRTKIIRRRSSTSLPGDKKSGTSPAATAKSHLSLRRRQALRGKS 486
+ GE + K ++ S P + T ++ R + +
Sbjct: 1738 GRQAEGEMGSARRPEKRGAASVKTSGSPRSPAGPEKPRGTQKTTPGVPAVLRGRTVIYVP 1797
Query: 487 SPVLKKTPNKGLVQVTTHRLCRLPPSRAHLPTKEASSLHAVRTAPTSKVIKTRYRIVKKT 546
SP + P KG R P + P + A +P + ++ +R K +
Sbjct: 1798 SPAPRAQP-KGTPGP------RATPRKVAPPCLAQPAAPAKVPSPGQQRSRSLHRPAKTS 1850
Query: 547 PASPLSAPPFPLSLPSWRARRLSLSRSLV------LNRLRPVASGGGKAQPG 592
+ LS PP + P+ A+ S S S L R RP + A PG
Sbjct: 1851 ELATLSQPPRSATPPARLAKTPSSSSSQTSPASQPLPRKRPPVTQAAGALPG 1902
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 46.6 bits (109), Expect = 1e-04
Identities = 87/365 (23%), Positives = 128/365 (35%), Gaps = 49/365 (13%)
Query: 220 SESVIAVKASFPSSALPPRTGVALGRKLGSHSVASCAPQLLGDRRVDAGHTDQPV----- 274
S + A+FP + P GVA G+ + + A L + V + PV
Sbjct: 638 SSLITPTVAAFPLESADP-AGVAPTTAKGTSTYTTTASPFL-EGTVSLAPKNHPVKEGTL 695
Query: 275 ------PSGSVGGPARPASGPRQAREASLVVTCRTNKFRKN----------NYKWVAASS 318
P+ S P P+ A A+LV+ K + K V S
Sbjct: 696 TTLPLVPTASENCPVAPSPQNTCAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGIS 755
Query: 319 KSPRVARRALSPRVAAENVCKASAGMANKVEKPQLIADPEP-----KPRKPATSSKPGSA 373
+ +A A SP+ ASA ++K L P P P+ +K GSA
Sbjct: 756 HTSALAPVASSPKECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSA 815
Query: 374 -PSKYKWKASSPSASSSSSFRWQSEASSKDHASQLSPVLSRSPSGDRPAVGHSGLKPLSG 432
P SSP + +SF ++ S + S+ SP + SP+ P G S
Sbjct: 816 GPDTPIGNLSSPVSPVEASFLPENSLSFQ--GSKDSPATTHSPTPPSP----KGAPTPSA 869
Query: 433 ETPLSAYKVKSRTKIIRRRSSTSLPGDKKSGTSPAATAKSHLSLRRRQALRGKSSPVLKK 492
TPLS V K S +LP K+ +PA LS+ + +++P K
Sbjct: 870 VTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKG 929
Query: 493 TPNKGLVQVTTHRLCRLPPSRAHLPTKEASSLHAVRTAPTSKVIKTRYRIVKKTPASPLS 552
P PS PT A++ + + P + K TP SP
Sbjct: 930 IP--------------ASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKG 975
Query: 553 APPFP 557
P P
Sbjct: 976 GPATP 980
Score = 38.1 bits (87), Expect = 0.039
Identities = 100/442 (22%), Positives = 161/442 (36%), Gaps = 84/442 (19%)
Query: 130 PSKSGSASASGAQRGSLEEFEETPWSDQRPREGEGEPPRGQLQPSRPTRARGTCSVEDPL 189
P++ ASA+ + +G+L ++P P P Q RP +G+ + P+
Sbjct: 771 PTEDSGASATASSKGTLTYLADSP----SPLGVSVSP-----QTKRPPTKKGSAGPDTPI 821
Query: 190 --LVCQKEPGKPRMV-KSVGSVGDSPREPRRTVSESVIAVKASFPSSALPPRT--GVALG 244
L P + + ++ S S P T S + + K + SA+ P + GV L
Sbjct: 822 GNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLP 881
Query: 245 RKLGSHSVASCAPQLLGDRRVDAGHTDQPVPSGSVGGPARPASGPRQAREASLVVTCRTN 304
K + P ++ + P P GPA PA P+QA S+
Sbjct: 882 PK------ETPTPSVV----------NLPFPK---EGPATPA--PKQAPALSM------- 913
Query: 305 KFRKNNYKWVAASSKSPRVARRALSPRVAAENVCKASAGMANKVEKPQLIADPEPK--PR 362
+S SP+ AR +P+ + A P P PK P
Sbjct: 914 ------------TSSSPKKARATPAPKGIPASPSPKGA------PTPPAATPPSPKGGPA 955
Query: 363 KPA---TSSKPGSAPSKYKWKASSPSASSSSSFRWQSEASSKDHASQLSPVLSRSPSGDR 419
P+ + P + P K ++PS + + + S K + SP + +P
Sbjct: 956 TPSPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTP---- 1011
Query: 420 PAVGHSGLK--PLSGETPLSAYKVKSRTKIIRRRSSTSLPGDKKSGTSPAATAKSHLSLR 477
PAV K P + P A + T + S + P K + T+PAAT S
Sbjct: 1012 PAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGP 1071
Query: 478 RRQALRGKSSPVLKKTPN-KGLVQVTTHRLCRLPPSRAHLPTKEASSLHAVRTAPTSKVI 536
+L+G +P P+ KG + + +PP+ K + + APT+
Sbjct: 1072 ATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPA- 1130
Query: 537 KTRYRIVKKTPASP---LSAPP 555
TP SP L+ PP
Sbjct: 1131 --------ATPPSPKGGLATPP 1144
Score = 37.0 bits (84), Expect = 0.087
Identities = 124/579 (21%), Positives = 181/579 (31%), Gaps = 69/579 (11%)
Query: 30 APGTPAASGWQPPTYHSGRAFSARYPRPSRRGYSSHHGPSWRKKYSLVNRPPGPSDPPAD 89
A TPA G G PS +G + P W PP P PA
Sbjct: 921 ARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAAT-PPSPKGGPAT 979
Query: 90 HAVRPLHGARGGQPPVPQQHVLERQVQLSQGQNVVIKVKPPSKSGSASASGAQRGSLEEF 149
+ + PP P+ +G V PPS GS +A+ +G+
Sbjct: 980 PSPKGAPTPPAATPPSPKGGPATPS---PKGAPTPPAVTPPSPKGSPAATPFPKGASTPP 1036
Query: 150 EETPWSDQRPREGEGEPPRGQLQPSRPTRARGTCSVEDPLLVCQKEPGKPRMVKSVGSVG 209
TP S + G P L PT T L + P P + +
Sbjct: 1037 AATPPSPK------GSPAATPLPKGAPTTPAAT------LPSPKGGPATPSLKGAPTPPA 1084
Query: 210 DSPREPRRTVSESVIAVKASFPSSALPP--RTGVALGRKLGSHSVASCAPQ-----LLGD 262
+P P+ + + A P +A PP + G+A G+ + + P L
Sbjct: 1085 ATPPSPKGGPA-TPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATP 1143
Query: 263 RRVDAGHTDQPVPSGSVGGPARPASGPRQAREASLVVTCR---TNKFRKNNYKWVAASSK 319
A T P GG A P A+ + + K AA+
Sbjct: 1144 PPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPP 1203
Query: 320 SPRVARRALSPRVA----AENVCKASAGMANKVEK--PQLIADPEPKPRK-PATS----- 367
SP+ SP+ A A G+A K P A P P+ PAT
Sbjct: 1204 SPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGA 1263
Query: 368 -SKPGSAPSKYKWKASSPSASSSSSFRWQSEASSKDHASQLSPVLSRSPSGDRPAV--GH 424
+ P + P K ++P + + + S K + P + +P P G
Sbjct: 1264 PTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGS 1323
Query: 425 SGLKPLSGETPLSAYKVKSRTKIIRRRSST-------SLPGDKKSGTSPAATA--KSHLS 475
G P G A S ++T + P K+ T PAAT K +
Sbjct: 1324 PGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPA 1383
Query: 476 LRRRQALRGKSSPVLKKTPNKGLV-----------------QVTTHRLCRLPPSRAHLPT 518
+ RG + P K P V T + PP+ +
Sbjct: 1384 MTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSL 1443
Query: 519 KEASSLHAVRTAPTSKVIKTRYRIVKKTPASPLSAPPFP 557
K+A + A + P + K + TP SP PP P
Sbjct: 1444 KKAPATSAPKGGPATPSSKGDPTLPAVTPPSP-KEPPAP 1481
Score = 37.0 bits (84), Expect = 0.087
Identities = 40/147 (27%), Positives = 55/147 (37%), Gaps = 31/147 (21%)
Query: 808 ATSPAPGPSDATARSRVSASHGPRKPSASQRPTRQTPSSAALTAAAVAAPPHCP-----G 862
A+ P TA V + P PTR+ P + +A + PP CP
Sbjct: 1668 ASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKGPQTKKSSATS---PPICPDPSAKN 1724
Query: 863 GSASP--------------SSSKASSSSSSSSSPPASLDHEAPSLQEAA--LAAACSNRL 906
GS P SSK + +S SP L AP +A+ L AA ++
Sbjct: 1725 GSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPL---APPESKASTPLTAAAFEKV 1781
Query: 907 CKLPSFISLQSSPSPGAQPRVRAPRAP 933
P S+ ++PS P V P AP
Sbjct: 1782 LPKPESASVSAAPS----PPVSLPLAP 1804
Score = 36.2 bits (82), Expect = 0.15
Identities = 35/124 (28%), Positives = 47/124 (37%), Gaps = 17/124 (13%)
Query: 830 PRKPSASQR-PTRQTPSSAALTAAAVAAPPHCPGGSASPSSSKASS----------SSSS 878
P P+AS+ P +P + A + P P SPS A + S +S
Sbjct: 699 PLVPTASENCPVAPSPQNTCAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKVDGISHTS 758
Query: 879 SSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSSPSP-GAQPRVRAPRAPLTKD 937
+ +P AS E P+ A A A S + L SPSP G + R P K
Sbjct: 759 ALAPVASSPKECPTEDSGASATASSK-----GTLTYLADSPSPLGVSVSPQTKRPPTKKG 813
Query: 938 SGKP 941
S P
Sbjct: 814 SAGP 817
Score = 36.2 bits (82), Expect = 0.15
Identities = 116/525 (22%), Positives = 178/525 (33%), Gaps = 86/525 (16%)
Query: 30 APGTPAASGWQPPTYHSGRAFSARYPRPSRRGYSSHHGPSWRKKYSLVNRPPGPSDPPAD 89
AP TPAA+ PP+ G A + P+ + PS K L P P P
Sbjct: 1194 APTTPAAT---PPSPKGGLATPSPKGAPTTPAATP---PS--PKGGLAT--PSPKGAPTT 1243
Query: 90 HAVRPLHGARGGQPPVPQQHVLERQVQLSQGQNVVIKVKPPSKSGSASASGAQRGSLEEF 149
A P G P P+ G PPS G A+ +G+
Sbjct: 1244 PAATPPSPKGGPATPPPK------------GAPTPPAATPPSLKGGL-ATPPHKGAPNPA 1290
Query: 150 EETPWSDQRPREGEG-EPPRGQLQP--SRPTRARGTCSVEDPLLVCQKEPGKPRMVKSVG 206
TP S P+ G PP+G P + P +G+ PG P +
Sbjct: 1291 VVTPPS---PKGGPATSPPKGAPTPPAATPPSPKGS-------------PGTPPPKGAPT 1334
Query: 207 SVGDSPREPRRTVSESVIAVKASFPSSALPPRTGVALGRKLGSHSVASCAPQLLGDRRVD 266
+P P+ T + + A+ PSS P T + K G A+ G
Sbjct: 1335 PPAVTPPSPKGTPT-----LPATTPSSKGGPTTPSS---KEGPTPPAATPSHKGGPAMTP 1386
Query: 267 AGHTDQPVPSGSVGGPARPASGPRQAREASLVVTCRTNKFRKNNYKWVAASSKSPRVARR 326
P G P PA P ++A R AA+ +
Sbjct: 1387 PSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATPVTREG----------AATPSKGDLTPP 1436
Query: 327 ALSP----RVAAENVCKASAGMANKVEKPQLIADPEPKPRKP------ATSSKPGSAPS- 375
A++P + A + K + P L A P P++P ATSS P AP+
Sbjct: 1437 AVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPAT 1496
Query: 376 -KYKWKASSPSASSSSSFRWQSEASS-KDHASQLSPVLSRSPSGDRPAVGHSGLKPLSGE 433
+ P+ SS + SS +D + + +LS+ PA L P
Sbjct: 1497 PAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKK----TPAT----LAPKEAL 1548
Query: 434 TP--LSAYKVKSRTKIIRRRSSTSLPGDKKSGTSPAATAKSHLSLRRRQAL---RGKSSP 488
P ++ K I + + + P K++ + PA T ++ + L +SP
Sbjct: 1549 IPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSP 1608
Query: 489 VLKKTPNKGLVQVTTHRLCRLPPSRAHLPTKEASSLHAVRTAPTS 533
K+ P V + P+ PT + +++ +PTS
Sbjct: 1609 SPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTS 1653
Score = 36.2 bits (82), Expect = 0.15
Identities = 38/133 (28%), Positives = 52/133 (39%), Gaps = 14/133 (10%)
Query: 808 ATSP---APGPSDATARSRVSASHGPRKPSASQRPTRQTPSSAALTAAAVAAPPHCPGGS 864
ATSP AP P AT S S G P + P TP S T A P GG
Sbjct: 1302 ATSPPKGAPTPPAATPPSP-KGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGP 1360
Query: 865 ASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSSPSPGAQ 924
+PSS + + P A+ H+ A+ R +PS +SP+
Sbjct: 1361 TTPSSKE------GPTPPAATPSHKG----GPAMTPPSPKRGPAIPSPKGDPTSPAVIPL 1410
Query: 925 PRVRAPRAPLTKD 937
+AP P+T++
Sbjct: 1411 SPKKAPATPVTRE 1423
Score = 35.8 bits (81), Expect = 0.19
Identities = 37/128 (28%), Positives = 50/128 (39%), Gaps = 10/128 (7%)
Query: 813 PGPSDATARSRVSASHGPRKPSASQRPTR--QTPSSAALTAAAVAAPPHCPGGSASPSSS 870
P P A A S S+S P+K A+ P +PS A PP GG A+PS
Sbjct: 903 PAPKQAPALSMTSSS--PKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPK 960
Query: 871 KASSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSSPSPGAQPRVRAP 930
A + +++ P PS + A A + PS ++PSP P A
Sbjct: 961 WAPTPPAATPPSPKG-GPATPSPKGAPTPPAATP-----PSPKGGPATPSPKGAPTPPAV 1014
Query: 931 RAPLTKDS 938
P K S
Sbjct: 1015 TPPSPKGS 1022
Score = 35.8 bits (81), Expect = 0.19
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 22/146 (15%)
Query: 804 SRRAATSPA---PGPSDATARSRVSASHGPRKPSASQRPTRQTPSSAALTAAAVAAPPHC 860
S+ T PA P P + A +V+ S P+K A+ P + L A ++P
Sbjct: 1461 SKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPM----GAPTLPAVIPSSPKEV 1516
Query: 861 PGGSASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSSPS 920
P +S A +++ S PA+L AP +EA + A + +PS + P+
Sbjct: 1517 PATPSSRRDPIAPTATLLSKKTPATL---AP--KEALIPPAMT-----VPSPKKTPAIPT 1566
Query: 921 PGAQPRVRAPRAPLTKDSGKPLHIKP 946
P AP P +K++ P + P
Sbjct: 1567 P-----KEAPATPSSKEASSPPAVTP 1587
Score = 35.4 bits (80), Expect = 0.25
Identities = 34/143 (23%), Positives = 53/143 (37%), Gaps = 9/143 (6%)
Query: 807 AATSPAPGPSDATARSRVSASHGPRKPSASQRPTRQTPSSAALTAAAVAAPPHCPGGSAS 866
AAT P+P AT + A P S + TPS A PP GG A+
Sbjct: 1176 AATPPSPKGGLATPSPK-GAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLAT 1234
Query: 867 PSSSKASSSSSSS--------SSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSS 918
PS A ++ +++ ++PP P+ +L + K ++ +
Sbjct: 1235 PSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTP 1294
Query: 919 PSPGAQPRVRAPRAPLTKDSGKP 941
PSP P P+ T + P
Sbjct: 1295 PSPKGGPATSPPKGAPTPPAATP 1317
Score = 34.3 bits (77), Expect = 0.57
Identities = 31/130 (23%), Positives = 49/130 (37%), Gaps = 5/130 (3%)
Query: 807 AATSPAPGPSDATARSRVSASHGPRKPSASQRPTRQTPSSAALTAAAVAAPPHCPGGSAS 866
AAT P+P AT + + + P + + TP + A PP G A+
Sbjct: 990 AATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAA 1049
Query: 867 PSSSKASSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSSPSPGAQPR 926
K + ++ +++ P PSL+ A A + PS ++PSP P
Sbjct: 1050 TPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATP-----PSPKGGPATPSPKGAPM 1104
Query: 927 VRAPRAPLTK 936
A P K
Sbjct: 1105 PPAATPPSPK 1114
Score = 33.1 bits (74), Expect = 1.3
Identities = 38/138 (27%), Positives = 50/138 (36%), Gaps = 13/138 (9%)
Query: 807 AATSPAPGPSDATARSRVSASHGPRKPSA---SQRPTRQTPSSAALTAAAVAAPPHCPGG 863
AAT P+P AT S P P+A S + TPS A PP GG
Sbjct: 944 AATPPSPKGGPATP----SPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGG 999
Query: 864 SASPSSSKASSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSSPSPGA 923
A+PS A + + + P P + A+ A + K S ++P P
Sbjct: 1000 PATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPK----GSPAATPLPKG 1055
Query: 924 QPRVRAPRAPLTKDSGKP 941
P P A L G P
Sbjct: 1056 AP--TTPAATLPSPKGGP 1071
Score = 33.1 bits (74), Expect = 1.3
Identities = 35/148 (23%), Positives = 56/148 (37%), Gaps = 10/148 (6%)
Query: 807 AATSPAPGPSDATARSRVSASHGPRKPSASQRPT--RQTPS---SAALTAAAVAAPPHCP 861
A T P+P + + S+ GP PS+ + PT TPS A+T + P P
Sbjct: 1337 AVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIP 1396
Query: 862 GGSASPSSSKA--SSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQ--- 916
P+S S + ++P PS + A L K P+ + +
Sbjct: 1397 SPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGP 1456
Query: 917 SSPSPGAQPRVRAPRAPLTKDSGKPLHI 944
++PS P + A P K+ P +
Sbjct: 1457 ATPSSKGDPTLPAVTPPSPKEPPAPKQV 1484
Score = 32.7 bits (73), Expect = 1.6
Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 17/129 (13%)
Query: 813 PGPSDATARSRVSASHGPRKPSASQRPTRQTPSSAALTAAAVAAPPHCPGGSASPSSSKA 872
P P A S V+ P P P ++TP+ + + P G A+P+ +A
Sbjct: 859 PSPKGAPTPSAVT----PLSPKGVTLPPKETPTPSVVNL------PFPKEGPATPAPKQA 908
Query: 873 SSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSSPSPGAQPRVRAPRA 932
+ S +SSSP + AP + A+ S + P + PSP P +P+
Sbjct: 909 PALSMTSSSPKKARATPAPK----GIPASPSPKGAPTP---PAATPPSPKGGPATPSPKW 961
Query: 933 PLTKDSGKP 941
T + P
Sbjct: 962 APTPPAATP 970
Score = 32.7 bits (73), Expect = 1.6
Identities = 36/131 (27%), Positives = 48/131 (36%), Gaps = 9/131 (6%)
Query: 807 AATSPAPGPSDATARSRVSASHGPRKPSASQRPTRQTPSSAALTAAAVAAPPHCPGGSAS 866
AAT P+P AT + A P S + TP A PP GG A+
Sbjct: 1130 AATPPSPKGGLATPPPK-GAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLAT 1188
Query: 867 PSSSKA-SSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSSPSPGAQP 925
PS A ++ +++ SP L +P AA PS ++PSP P
Sbjct: 1189 PSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAAT-------PPSPKGGLATPSPKGAP 1241
Query: 926 RVRAPRAPLTK 936
A P K
Sbjct: 1242 TTPAATPPSPK 1252
Score = 31.6 bits (70), Expect = 3.7
Identities = 36/131 (27%), Positives = 46/131 (35%), Gaps = 9/131 (6%)
Query: 807 AATSPAPGPSDATARSRVSASHGPRKPSASQRPTRQTPSSAALTAAAVAAPPHCPGGSAS 866
AAT P+P AT S A P S + TP A PP GG A+
Sbjct: 1084 AATPPSPKGGPATP-SPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLAT 1142
Query: 867 PSSSKA-SSSSSSSSSPPASLDHEAPSLQEAALAAACSNRLCKLPSFISLQSSPSPGAQP 925
P A ++ +++ SP L P AA PS ++PSP P
Sbjct: 1143 PPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAAT-------PPSPKGGLATPSPKGAP 1195
Query: 926 RVRAPRAPLTK 936
A P K
Sbjct: 1196 TTPAATPPSPK 1206
>gi|46411174 muscleblind-like 1 isoform g [Homo sapiens]
Length = 342
Score = 46.2 bits (108), Expect = 1e-04
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 699 VCTRFVRGTCKKTDGTCPFSH-----HVSKEKMPVCSYFLKGICSNSNCPYSH 746
VC F RGTC + D C F+H V ++ C LKG CS NC Y H
Sbjct: 18 VCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRCSRENCKYLH 70
Score = 42.0 bits (97), Expect = 0.003
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 695 EKVAVCTRFVRGTCKKTDGTCPFSH-------HVSKEKMPVCSYFLKGICSNSNCPYSHV 747
+++ VC + RG C + + C F+H + + VC ++KG CS C Y H
Sbjct: 180 DRLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHP 239
Query: 748 YVSRKAEV 755
+A++
Sbjct: 240 PAHLQAKI 247
>gi|46411172 muscleblind-like 1 isoform f [Homo sapiens]
Length = 340
Score = 46.2 bits (108), Expect = 1e-04
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 699 VCTRFVRGTCKKTDGTCPFSH-----HVSKEKMPVCSYFLKGICSNSNCPYSH 746
VC F RGTC + D C F+H V ++ C LKG CS NC Y H
Sbjct: 18 VCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRCSRENCKYLH 70
Score = 42.0 bits (97), Expect = 0.003
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 695 EKVAVCTRFVRGTCKKTDGTCPFSH-------HVSKEKMPVCSYFLKGICSNSNCPYSHV 747
+++ VC + RG C + + C F+H + + VC ++KG CS C Y H
Sbjct: 180 DRLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHP 239
Query: 748 YVSRKAEV 755
+A++
Sbjct: 240 PAHLQAKI 247
>gi|46411170 muscleblind-like 1 isoform e [Homo sapiens]
Length = 314
Score = 46.2 bits (108), Expect = 1e-04
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 699 VCTRFVRGTCKKTDGTCPFSH-----HVSKEKMPVCSYFLKGICSNSNCPYSH 746
VC F RGTC + D C F+H V ++ C LKG CS NC Y H
Sbjct: 18 VCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRCSRENCKYLH 70
Score = 41.6 bits (96), Expect = 0.004
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
Query: 694 PEKVAVCTRFVRGTCKKTDGTCPFSH-------HVSKEKMPVCSYFLKGICSNSNCPYSH 746
P + VC + RG C + + C F+H + + VC ++KG CS C Y H
Sbjct: 111 PLQPVVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFH 170
Query: 747 VYVSRKAEV 755
+A++
Sbjct: 171 PPAHLQAKI 179
>gi|46411168 muscleblind-like 1 isoform d [Homo sapiens]
Length = 302
Score = 46.2 bits (108), Expect = 1e-04
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 699 VCTRFVRGTCKKTDGTCPFSH-----HVSKEKMPVCSYFLKGICSNSNCPYSH 746
VC F RGTC + D C F+H V ++ C LKG CS NC Y H
Sbjct: 18 VCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRCSRENCKYLH 70
Score = 41.6 bits (96), Expect = 0.004
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
Query: 694 PEKVAVCTRFVRGTCKKTDGTCPFSH-------HVSKEKMPVCSYFLKGICSNSNCPYSH 746
P + VC + RG C + + C F+H + + VC ++KG CS C Y H
Sbjct: 111 PLQPVVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFH 170
Query: 747 VYVSRKAEV 755
+A++
Sbjct: 171 PPAHLQAKI 179
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.128 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,979,829
Number of Sequences: 37866
Number of extensions: 2660279
Number of successful extensions: 22198
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 1055
Number of HSP's that attempted gapping in prelim test: 15178
Number of HSP's gapped (non-prelim): 6377
length of query: 948
length of database: 18,247,518
effective HSP length: 112
effective length of query: 836
effective length of database: 14,006,526
effective search space: 11709455736
effective search space used: 11709455736
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.