Guide to the Human Genome
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Name: MBNL3 Sequence: fasta or formatted (334aa) NCBI GI: 30315649
Description:

muscleblind-like 3 isoform R

Referenced in:

Muscle

Other entries for this name:
alt prot [354aa] muscleblind-like 3 isoform G
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.1         37           3
 C cysteine            4.2         14           1
 D aspartate           3.0         10           1
 E glutamate           3.6         12           1
 F phenylalanine       3.3         11           1
 G glycine             4.8         16           1
 H histidine           3.6         12           2
 I isoleucine          4.2         14           1
 K lysine              3.6         12           1
 L leucine             7.5         25           1
 M methionine          5.7         19           2
 N asparagine          5.7         19           2
 P proline            10.5         35           3
 Q glutamine           5.1         17           2
 R arginine            5.1         17           1
 S serine              5.7         19           2
 T threonine           6.6         22           2
 V valine              5.1         17           2
 W tryptophan          0.3          1           1
 Y tyrosine            1.5          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   muscleblind-like 3 isoform R 
MBNL3                 0.925   muscleblind-like 3 isoform G 
MBNL2                 0.646   muscleblind-like 2 isoform 1 
MBNL1                 0.626   muscleblind-like 1 isoform a 
MBNL1                 0.592   muscleblind-like 1 isoform b 
MBNL1                 0.584   muscleblind-like 1 isoform c 
MBNL2                 0.561   muscleblind-like 2 isoform 3 
MBNL1                 0.538   muscleblind-like 1 isoform f 
MBNL1                 0.529   muscleblind-like 1 isoform g 
MBNL1                 0.519   muscleblind-like 1 isoform e 
MBNL1                 0.483   muscleblind-like 1 isoform d 
ZC3H3                 0.037   zinc finger CCCH-type containing 3 
ZC3H10                0.036   zinc finger CCCH-type containing 10 
TCERG1                0.025   transcription elongation regulator 1 isoform 2 [Homo...
TCERG1                0.025   transcription elongation regulator 1 isoform 1 [Homo...
CPSF4L                0.021   cleavage and polyadenylation specific factor 4-like...
ZNF207                0.019   zinc finger protein 207 isoform c 
ZNF207                0.019   zinc finger protein 207 isoform a 
ZNF207                0.019   zinc finger protein 207 isoform b 
ZC3H6                 0.016   zinc finger CCCH-type domain containing 6 
MKRN3                 0.015   makorin ring finger protein 3 
EP300                 0.015   E1A binding protein p300 
ZC3H4                 0.015   zinc finger CCCH-type containing 4 
HIVEP3                0.015   human immunodeficiency virus type I enhancer bindin...
HIVEP3                0.015   human immunodeficiency virus type I enhancer bindin...
ANXA11                0.015   annexin A11 
ANXA11                0.015   annexin A11 
ANXA11                0.015   annexin A11 
CPSF4                 0.015   cleavage and polyadenylation specific factor 4, 30k...
CPSF4                 0.015   cleavage and polyadenylation specific factor 4, 30kDa...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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