Guide to the Human Genome
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Name: MBNL1 Sequence: fasta or formatted (302aa) NCBI GI: 46411168
Description:

muscleblind-like 1 isoform d

Referenced in:

Muscle

Other entries for this name:
alt prot [382aa] muscleblind-like 1 isoform a
alt prot [370aa] muscleblind-like 1 isoform b
alt prot [388aa] muscleblind-like 1 isoform c
alt prot [314aa] muscleblind-like 1 isoform e
alt prot [340aa] muscleblind-like 1 isoform f
alt prot [342aa] muscleblind-like 1 isoform g
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            13.6         41           4
 C cysteine            4.3         13           1
 D aspartate           2.6          8           1
 E glutamate           3.6         11           1
 F phenylalanine       3.0          9           1
 G glycine             4.0         12           1
 H histidine           3.3         10           1
 I isoleucine          4.0         12           2
 K lysine              5.0         15           1
 L leucine             6.0         18           1
 M methionine          4.0         12           2
 N asparagine          5.6         17           2
 P proline             7.6         23           3
 Q glutamine           7.9         24           2
 R arginine            5.0         15           1
 S serine              4.3         13           1
 T threonine           7.9         24           2
 V valine              5.6         17           2
 W tryptophan          0.3          1           1
 Y tyrosine            2.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   muscleblind-like 1 isoform d 
MBNL1                 0.985   muscleblind-like 1 isoform e 
MBNL1                 0.866   muscleblind-like 1 isoform b 
MBNL1                 0.851   muscleblind-like 1 isoform a 
MBNL1                 0.848   muscleblind-like 1 isoform c 
MBNL1                 0.709   muscleblind-like 1 isoform g 
MBNL3                 0.598   muscleblind-like 3 isoform G 
MBNL3                 0.541   muscleblind-like 3 isoform R 
MBNL1                 0.467   muscleblind-like 1 isoform f 
MBNL2                 0.459   muscleblind-like 2 isoform 1 
MBNL2                 0.385   muscleblind-like 2 isoform 3 
ZC3H10                0.059   zinc finger CCCH-type containing 10 
ZC3H3                 0.035   zinc finger CCCH-type containing 3 
CPSF4L                0.032   cleavage and polyadenylation specific factor 4-like...
CPSF4                 0.027   cleavage and polyadenylation specific factor 4, 30k...
CPSF4                 0.027   cleavage and polyadenylation specific factor 4, 30kDa...
MKRN1                 0.022   makorin ring finger protein 1 isoform 2 
MKRN1                 0.022   makorin ring finger protein 1 isoform 1 
ZC3HAV1L              0.015   zinc finger CCCH-type, antiviral 1-like 
MAZ                   0.015   MYC-associated zinc finger protein isoform 2 
MAZ                   0.015   MYC-associated zinc finger protein isoform 1 
TCERG1                0.013   transcription elongation regulator 1 isoform 2 [Homo...
TCERG1                0.013   transcription elongation regulator 1 isoform 1 [Homo...
ASAP1                 0.013   development and differentiation enhancing factor 1 [...
ZC3H11A               0.013   zinc finger CCCH-type containing 11A 
ELN                   0.013   elastin isoform d precursor 
ELN                   0.013   elastin isoform a precursor 
ZFP36L1               0.012   butyrate response factor 1 
LOC100133761          0.012   PREDICTED: similar to Mucin-6, partial 
RBM47                 0.010   RNA binding motif protein 47 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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