Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MBNL2 Sequence: fasta or formatted (361aa) NCBI GI: 46411180
Description:

muscleblind-like 2 isoform 3

Referenced in:

Muscle

Other entries for this name:
alt prot [367aa] muscleblind-like 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.4         41           6
 C cysteine            4.7         17           1
 D aspartate           2.8         10           1
 E glutamate           4.4         16           2
 F phenylalanine       3.6         13           1
 G glycine             4.7         17           1
 H histidine           3.3         12           1
 I isoleucine          4.2         15           2
 K lysine              4.7         17           1
 L leucine             6.9         25           2
 M methionine          2.5          9           1
 N asparagine          3.9         14           2
 P proline             8.9         32           2
 Q glutamine           6.6         24           2
 R arginine            5.0         18           1
 S serine              5.5         20           3
 T threonine           8.3         30           2
 V valine              6.1         22           1
 W tryptophan          0.3          1           1
 Y tyrosine            2.2          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   muscleblind-like 2 isoform 3 
MBNL2                 0.878   muscleblind-like 2 isoform 1 
MBNL1                 0.632   muscleblind-like 1 isoform g 
MBNL1                 0.632   muscleblind-like 1 isoform b 
MBNL1                 0.632   muscleblind-like 1 isoform a 
MBNL1                 0.623   muscleblind-like 1 isoform c 
MBNL3                 0.585   muscleblind-like 3 isoform G 
MBNL1                 0.556   muscleblind-like 1 isoform f 
MBNL3                 0.520   muscleblind-like 3 isoform R 
MBNL1                 0.319   muscleblind-like 1 isoform e 
MBNL1                 0.319   muscleblind-like 1 isoform d 
ZC3H3                 0.031   zinc finger CCCH-type containing 3 
ZC3H10                0.026   zinc finger CCCH-type containing 10 
CPSF4L                0.022   cleavage and polyadenylation specific factor 4-like...
ZFP36                 0.017   zinc finger protein 36, C3H type, homolog 
ZC3H6                 0.017   zinc finger CCCH-type domain containing 6 
PTPN23                0.014   protein tyrosine phosphatase, non-receptor type 23 [...
CPSF4                 0.014   cleavage and polyadenylation specific factor 4, 30k...
CPSF4                 0.014   cleavage and polyadenylation specific factor 4, 30kDa...
SIX5                  0.014   sine oculis homeobox homolog 5 
SF3A1                 0.014   splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom...
SF3A1                 0.014   splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo...
ANXA11                0.012   annexin A11 
ANXA11                0.012   annexin A11 
ANXA11                0.012   annexin A11 
GNAS                  0.012   GNAS complex locus alex 
NLK                   0.012   nemo like kinase 
ENOX2                 0.011   ecto-NOX disulfide-thiol exchanger 2 isoform a [Homo...
ENOX2                 0.011   ecto-NOX disulfide-thiol exchanger 2 isoform b [Homo...
ZC3H11A               0.011   zinc finger CCCH-type containing 11A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press