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Search of human proteins with 15529978
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15529978 zinc finger protein 622 [Homo sapiens]
(477 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15529978 zinc finger protein 622 [Homo sapiens] 972 0.0
gi|17975763 myelin transcription factor 1 [Homo sapiens] 54 3e-07
gi|60498973 myelin transcription factor 1-like [Homo sapiens] 52 1e-06
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 47 4e-05
gi|21361639 DIPB protein [Homo sapiens] 46 6e-05
gi|189409130 zinc finger E-box binding homeobox 1 isoform a [Hom... 45 1e-04
gi|189409128 zinc finger E-box binding homeobox 1 isoform b [Hom... 45 1e-04
gi|68077168 DnaJ homology subfamily A member 5 isoform 1 [Homo s... 45 1e-04
gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 fami... 45 2e-04
gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32 fam... 45 2e-04
gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32 fam... 45 2e-04
gi|109150435 ankyrin repeat and zinc finger domain containing 1 ... 45 2e-04
gi|109150425 ankyrin repeat and zinc finger domain containing 1 ... 45 2e-04
gi|42740903 MTERF domain containing 2 [Homo sapiens] 43 5e-04
gi|7661690 coiled-coil domain containing 9 [Homo sapiens] 43 5e-04
gi|225735631 mesoderm induction early response 1 isoform g [Homo... 43 7e-04
gi|225735619 mesoderm induction early response 1 isoform i [Homo... 43 7e-04
gi|225735617 mesoderm induction early response 1 isoform h [Homo... 43 7e-04
gi|225735615 mesoderm induction early response 1 isoform a [Homo... 43 7e-04
gi|118130872 mesoderm induction early response 1 isoform f [Homo... 43 7e-04
gi|225735612 mesoderm induction early response 1 isoform e [Homo... 43 7e-04
gi|225735610 mesoderm induction early response 1 isoform d [Homo... 43 7e-04
gi|118130815 mesoderm induction early response 1 isoform c [Homo... 43 7e-04
gi|225735607 mesoderm induction early response 1 isoform b [Homo... 43 7e-04
gi|225735605 mesoderm induction early response 1 isoform a [Homo... 43 7e-04
gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 famil... 43 7e-04
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 43 7e-04
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 43 7e-04
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 42 0.001
gi|215422388 death-domain associated protein isoform a [Homo sap... 42 0.001
>gi|15529978 zinc finger protein 622 [Homo sapiens]
Length = 477
Score = 973 bits (2514), Expect = 0.0
Identities = 477/477 (100%), Positives = 477/477 (100%)
Query: 1 MATYTCITCRVAFRDADMQRAHYKTDWHRYNLRRKVASMAPVTAEGFQERVRAQRAVAEE 60
MATYTCITCRVAFRDADMQRAHYKTDWHRYNLRRKVASMAPVTAEGFQERVRAQRAVAEE
Sbjct: 1 MATYTCITCRVAFRDADMQRAHYKTDWHRYNLRRKVASMAPVTAEGFQERVRAQRAVAEE 60
Query: 61 ESKGSATYCTVCSKKFASFNAYENHLKSRRHVELEKKAVQAVNRKVEMMNEKNLEKGLGV 120
ESKGSATYCTVCSKKFASFNAYENHLKSRRHVELEKKAVQAVNRKVEMMNEKNLEKGLGV
Sbjct: 61 ESKGSATYCTVCSKKFASFNAYENHLKSRRHVELEKKAVQAVNRKVEMMNEKNLEKGLGV 120
Query: 121 DSVDKDAMNAAIQQAIKAQPSMSPKKAPPAPAKEARNVVAVGTGGRGTHDRDPSEKPPRL 180
DSVDKDAMNAAIQQAIKAQPSMSPKKAPPAPAKEARNVVAVGTGGRGTHDRDPSEKPPRL
Sbjct: 121 DSVDKDAMNAAIQQAIKAQPSMSPKKAPPAPAKEARNVVAVGTGGRGTHDRDPSEKPPRL 180
Query: 181 QWFEQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEA 240
QWFEQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEA
Sbjct: 181 QWFEQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEA 240
Query: 241 EEGPPLGAIPITDCLFCSHHSSSLMKNVAHMTKDHSFFIPDIEYLSDIKGLIKYLGEKVG 300
EEGPPLGAIPITDCLFCSHHSSSLMKNVAHMTKDHSFFIPDIEYLSDIKGLIKYLGEKVG
Sbjct: 241 EEGPPLGAIPITDCLFCSHHSSSLMKNVAHMTKDHSFFIPDIEYLSDIKGLIKYLGEKVG 300
Query: 301 VGKICLWCNEKGKSFYSTEAVQAHMNDKSHCKLFTDGDAALEFADFYDFRSSYPDHKEGE 360
VGKICLWCNEKGKSFYSTEAVQAHMNDKSHCKLFTDGDAALEFADFYDFRSSYPDHKEGE
Sbjct: 301 VGKICLWCNEKGKSFYSTEAVQAHMNDKSHCKLFTDGDAALEFADFYDFRSSYPDHKEGE 360
Query: 361 DPNKAEELPSEKNLEYDDETMELILPSGARVGHRSLMRYYKQRFGLSRAVAVAKNRKAVG 420
DPNKAEELPSEKNLEYDDETMELILPSGARVGHRSLMRYYKQRFGLSRAVAVAKNRKAVG
Sbjct: 361 DPNKAEELPSEKNLEYDDETMELILPSGARVGHRSLMRYYKQRFGLSRAVAVAKNRKAVG 420
Query: 421 RVLQQYRALGWTGSTGAALMRERDMQYVQRMKSKWMLKTGMKNNATKQMHFRVQVRF 477
RVLQQYRALGWTGSTGAALMRERDMQYVQRMKSKWMLKTGMKNNATKQMHFRVQVRF
Sbjct: 421 RVLQQYRALGWTGSTGAALMRERDMQYVQRMKSKWMLKTGMKNNATKQMHFRVQVRF 477
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 53.9 bits (128), Expect = 3e-07
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Query: 107 EMMNEKNLEKGLGVDSVDKDAMNAAIQQAIKAQPSMSPKKAPPAPAKEARNVVAVGTGGR 166
++ E +E+ LG + + +Q+A + S +K ++A VV V T
Sbjct: 173 QIAEETLVEEDLGQAAKPGPGIVHLLQEAAEGAASEEGEKGLFIQPEDAEEVVEVTT--E 230
Query: 167 GTHDRDPSEKPPRLQWFEQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEA 226
+ D P + K + +EED EEEEE+ + ++ E+ + +EE E E+ E
Sbjct: 231 RSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEE 290
Query: 227 MDDVVEQDAEEEEAEEGPP 245
++ E++ EEEE EE P
Sbjct: 291 EEEEEEEEEEEEEEEEAAP 309
Score = 45.8 bits (107), Expect = 8e-05
Identities = 30/132 (22%), Positives = 65/132 (49%), Gaps = 14/132 (10%)
Query: 115 EKGLGVDSVDKDAMNAAIQQAIKAQPSMSPKKAPPAPAKEARNVVAVGTGGRGTHDRDPS 174
EKGL + D + + ++ + + P+ A ++E+ G +H+ +
Sbjct: 211 EKGLFIQPEDAEEV---VEVTTERSQDLCPQSLEDAASEESSK-----QKGILSHEEEDE 262
Query: 175 EKPPRLQWFEQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQD 234
E+ E++ ++ ++EE+ EEEEE+ + ++ E+ + +EE E E+ A D + ++D
Sbjct: 263 EEE------EEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQED 316
Query: 235 AEEEEAEEGPPL 246
A++ P L
Sbjct: 317 TSHTSAQKAPEL 328
>gi|60498973 myelin transcription factor 1-like [Homo sapiens]
Length = 1184
Score = 52.0 bits (123), Expect = 1e-06
Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 139 QPSMSPKKAPPAPAKEARNVVAVGTGGRGTHDRDPSEKPPRLQWFEQQAKKLAKQQEEDS 198
QP K P K + V GT D D E E + ++ ++ +E
Sbjct: 67 QPQEPAPKRKPFAVKADSSSVDECDDSDGTEDMDEKE--------EDEGEEYSEDNDEPG 118
Query: 199 EEEEEDLDGD--DWEDIDSDEELECEDTEAMDDVVEQDAEEEEAEE 242
+E+EED +GD + E+I+ ++E + ED E ++D E++ EEEE EE
Sbjct: 119 DEDEEDEEGDREEEEEIEEEDEDDDEDGEDVEDEEEEEEEEEEEEE 164
Score = 38.9 bits (89), Expect = 0.010
Identities = 22/88 (25%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 196 EDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAEEGPPLGAIPI---- 251
ED EEEEE+ + ++ E+ + D ++ C +T M D + D +E + L A +
Sbjct: 150 EDEEEEEEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDDNNNDEYDNYDELVAKSLLNLG 209
Query: 252 ---TDCLFCSHHSSSLMKNVAHMTKDHS 276
D + + S + N ++ +D S
Sbjct: 210 KIAEDAAYRARTESEMNSNTSNSLEDDS 237
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 47.0 bits (110), Expect = 4e-05
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 20/120 (16%)
Query: 134 QAIKAQPSMSPKKAPPAPAKEAR------NVVAVGTGGRGTHDRDPSEKPPRLQW----- 182
+ + A P P PP P +V GT G G PP L+
Sbjct: 830 EELPAAPGPLPPPPPPPPPVPGPVTLPPPQLVPEGTPGGGG--------PPALEEDLTVI 881
Query: 183 -FEQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAE 241
++ +++EE+ EEEEE+ + +D+E+ + DEE E+ E ++ E++ EEEE E
Sbjct: 882 NINSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGE 941
Score = 43.5 bits (101), Expect = 4e-04
Identities = 26/103 (25%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 140 PSMSPKKAPPAPAKEARNVVAVGTGGRGTHDRDPSEKPPRLQWFEQQAKKLAKQQEEDSE 199
P +P P +E V+ + + + + E+ E++ ++ + EE+ E
Sbjct: 862 PEGTPGGGGPPALEEDLTVININSSDEEEEEEEEEEEE------EEEEEEEEEDFEEEEE 915
Query: 200 EEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAEE 242
+EEE + ++ E+ + +EE E E+ E ++ E+D EEEE E
Sbjct: 916 DEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELE 958
Score = 41.6 bits (96), Expect = 0.002
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 192 KQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAEEG 243
+++EE+ EEEEE+ + ++ ED + +EE E E E ++ E+ EE E EEG
Sbjct: 889 EEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEG 940
Score = 37.7 bits (86), Expect = 0.023
Identities = 22/76 (28%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 175 EKPPRLQWFEQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQD 234
E+ ++FE++ +++EE+ EEE E+ +G+ E+ + ++E E E+ E ++D+
Sbjct: 913 EEEDEEEYFEEE-----EEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLEFGT 967
Query: 235 AEEEEAEEGPPLGAIP 250
A E E PP +P
Sbjct: 968 AGGEVEEGAPPPPTLP 983
Score = 36.2 bits (82), Expect = 0.067
Identities = 20/78 (25%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 170 DRDPSEKPPRLQWFEQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDD 229
+ + E+ + E+ ++ +++EE+ EE EE+ + ++ E + +EE + E+ E +++
Sbjct: 900 EEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEE 959
Query: 230 V--VEQDAEEEEAEEGPP 245
V +E E EEG P
Sbjct: 960 VEDLEFGTAGGEVEEGAP 977
>gi|21361639 DIPB protein [Homo sapiens]
Length = 344
Score = 46.2 bits (108), Expect = 6e-05
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 165 GRGTHDRDPSEKPPRLQWFEQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEELECEDT 224
G G + K + + E +A + + EE+SE EEE ++ ED +SDEE E +
Sbjct: 73 GEGAGKEEAEVKVEQEREIESEAGE-ESESEEESESEEESETEEESED-ESDEESEEDSE 130
Query: 225 EAMDDVVEQDAEEEEAEEG 243
E M+D E +AEE+ EEG
Sbjct: 131 EEMEDEQESEAEEDNQEEG 149
Score = 39.3 bits (90), Expect = 0.008
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 184 EQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEELECE-DTEAMDDVVEQDAEEEEAE 241
E ++++ ++ +EE EEE + + D+ + DS+EE+E E ++EA +D E+ E E E
Sbjct: 98 ESESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDNQEEGESEAEGE 156
Score = 36.6 bits (83), Expect = 0.051
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
Query: 165 GRGTHDRDPSEKPPRLQWFEQQAKKLAKQQEEDSE-----EEEEDLDGDDWEDIDSDEEL 219
G + + SE + E+ + ++ EEDSE E+E + + D+ E+ +S+ E
Sbjct: 96 GEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDNQEEGESEAEG 155
Query: 220 ECEDTEAMDDVVEQDAEEEEAEEGPPLGAIPITDC 254
E E D +E +AE + P G T C
Sbjct: 156 ETEAESEFDPEIEMEAERVAKRKCPDHGLDLSTYC 190
>gi|189409130 zinc finger E-box binding homeobox 1 isoform a [Homo
sapiens]
Length = 1108
Score = 45.4 bits (106), Expect = 1e-04
Identities = 46/214 (21%), Positives = 88/214 (41%), Gaps = 12/214 (5%)
Query: 69 CTVCSKKFASFNA-----YENHLKSRRHVELEKKAVQAVNRKVEMMNEKNLEKGLGVDSV 123
C +C K F ++ YE+ K + KKA + + +E M + EK D
Sbjct: 890 CDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKPYQCDKC 949
Query: 124 DKD-AMNAAIQQAIKAQPSMSPKKAPPAPAKEARNVVAVGTGGRGTHDRDPSEKPPRLQW 182
K + + + Q + + S ++A + E G + + Q
Sbjct: 950 GKRFSHSGSYSQHMNHRYSYCKREAEERDSTEQEEA-----GPEILSNEHVGARASPSQG 1004
Query: 183 FEQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAEE 242
+ + L ++++EDSE+EEE+ D + E++ ++E E + ++ E++ EEEE EE
Sbjct: 1005 DSDERESLTREEDEDSEKEEEEED-KEMEELQEEKECEKPQGDEEEEEEEEEVEEEEVEE 1063
Query: 243 GPPLGAIPITDCLFCSHHSSSLMKNVAHMTKDHS 276
G T+ L + S ++ + S
Sbjct: 1064 AENEGEEAKTEGLMKDDRAESQASSLGQKVGESS 1097
>gi|189409128 zinc finger E-box binding homeobox 1 isoform b [Homo
sapiens]
Length = 1124
Score = 45.4 bits (106), Expect = 1e-04
Identities = 46/214 (21%), Positives = 88/214 (41%), Gaps = 12/214 (5%)
Query: 69 CTVCSKKFASFNA-----YENHLKSRRHVELEKKAVQAVNRKVEMMNEKNLEKGLGVDSV 123
C +C K F ++ YE+ K + KKA + + +E M + EK D
Sbjct: 906 CDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKPYQCDKC 965
Query: 124 DKD-AMNAAIQQAIKAQPSMSPKKAPPAPAKEARNVVAVGTGGRGTHDRDPSEKPPRLQW 182
K + + + Q + + S ++A + E G + + Q
Sbjct: 966 GKRFSHSGSYSQHMNHRYSYCKREAEERDSTEQEEA-----GPEILSNEHVGARASPSQG 1020
Query: 183 FEQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAEE 242
+ + L ++++EDSE+EEE+ D + E++ ++E E + ++ E++ EEEE EE
Sbjct: 1021 DSDERESLTREEDEDSEKEEEEED-KEMEELQEEKECEKPQGDEEEEEEEEEVEEEEVEE 1079
Query: 243 GPPLGAIPITDCLFCSHHSSSLMKNVAHMTKDHS 276
G T+ L + S ++ + S
Sbjct: 1080 AENEGEEAKTEGLMKDDRAESQASSLGQKVGESS 1113
>gi|68077168 DnaJ homology subfamily A member 5 isoform 1 [Homo
sapiens]
Length = 576
Score = 45.4 bits (106), Expect = 1e-04
Identities = 25/98 (25%), Positives = 45/98 (45%)
Query: 58 AEEESKGSATYCTVCSKKFASFNAYENHLKSRRHVELEKKAVQAVNRKVEMMNEKNLEKG 117
AE+ YC C K F + A +NH KS++H E+ Q + + E + +++
Sbjct: 305 AEDAELYDDLYCPACDKSFKTEKAMKNHEKSKKHREMVALLKQQLEEEEENFSRPQIDEN 364
Query: 118 LGVDSVDKDAMNAAIQQAIKAQPSMSPKKAPPAPAKEA 155
D+ +++ +A Q+ K Q K A P K++
Sbjct: 365 PLDDNSEEEMEDAPKQKLSKKQKKKKQKPAQDVPGKDS 402
Score = 33.5 bits (75), Expect = 0.44
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 67 TYCTVCSKKFASFNAYENHLKSRRHVELEKKAVQAVNRKV--EMMNEKN-LEKGLGVDSV 123
++CT K FA Y+ S R EK+A++ N+K+ + EKN L + L
Sbjct: 157 SFCT--QKNFAWKEEYDTRQASNRW---EKRAMEKENKKIRDKARKEKNELVRQLVAFIR 211
Query: 124 DKDAMNAAIQQAIKAQPSMSPKKAPPAPAKEARNVVAVGTGGRGTHDRDPSEKPPRLQWF 183
+D A ++ ++ Q + +KA ++ + R + LQ
Sbjct: 212 KRDKRVQAHRKLVEEQNAEKARKAEEMRRQQKLKQAKLVEQYREQSWMTMANLEKELQEM 271
Query: 184 EQQAKKLAKQQEEDSEEEEEDL-DGDDWEDIDSDEELECEDTEAMDDV 230
E + +K +++E EE +L D +D +D D E ED E DD+
Sbjct: 272 EARYEKEFGDGSDENEMEEHELKDEEDGKDSD-----EAEDAELYDDL 314
>gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member E isoform 1 [Homo sapiens]
Length = 268
Score = 44.7 bits (104), Expect = 2e-04
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 14/74 (18%)
Query: 184 EQQAKKLAKQQEEDSEEEEEDLDGDDWEDI------DSDEEL--------ECEDTEAMDD 229
E +A +EE+ EEEEED D D+ ED + +EE+ E +D E DD
Sbjct: 175 ENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYLMKEEIQDEEDDDD 234
Query: 230 VVEQDAEEEEAEEG 243
VE+ EEEE EEG
Sbjct: 235 YVEEGEEEEEEEEG 248
Score = 37.7 bits (86), Expect = 0.023
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 185 QQAKKLAKQQEEDSE----EEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEA 240
QQ L +ED+E EEE+D DGD ED + +EE E E ++ E++ EE+E
Sbjct: 140 QQITYLDGFDQEDNEAPDSEEEDDEDGD--EDDEEEEENEAGPPEGYEEEEEEEEEEDED 197
Query: 241 EE 242
E+
Sbjct: 198 ED 199
Score = 34.3 bits (77), Expect = 0.26
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 205 LDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAEEGPPLG 247
LDG D ED ++ + E +D +D E D EEEE E GPP G
Sbjct: 145 LDGFDQEDNEAPDSEEEDD----EDGDEDDEEEEENEAGPPEG 183
>gi|210147569 acidic (leucine-rich) nuclear phosphoprotein 32
family, member E isoform 2 [Homo sapiens]
Length = 227
Score = 44.7 bits (104), Expect = 2e-04
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 14/74 (18%)
Query: 184 EQQAKKLAKQQEEDSEEEEEDLDGDDWEDI------DSDEEL--------ECEDTEAMDD 229
E +A +EE+ EEEEED D D+ ED + +EE+ E +D E DD
Sbjct: 134 ENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYLMKEEIQDEEDDDD 193
Query: 230 VVEQDAEEEEAEEG 243
VE+ EEEE EEG
Sbjct: 194 YVEEGEEEEEEEEG 207
Score = 37.7 bits (86), Expect = 0.023
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 185 QQAKKLAKQQEEDSE----EEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEA 240
QQ L +ED+E EEE+D DGD ED + +EE E E ++ E++ EE+E
Sbjct: 99 QQITYLDGFDQEDNEAPDSEEEDDEDGD--EDDEEEEENEAGPPEGYEEEEEEEEEEDED 156
Query: 241 EE 242
E+
Sbjct: 157 ED 158
Score = 34.3 bits (77), Expect = 0.26
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 205 LDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAEEGPPLG 247
LDG D ED ++ + E +D +D E D EEEE E GPP G
Sbjct: 104 LDGFDQEDNEAPDSEEEDD----EDGDEDDEEEEENEAGPPEG 142
>gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32
family, member E isoform 3 [Homo sapiens]
Length = 220
Score = 44.7 bits (104), Expect = 2e-04
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 14/74 (18%)
Query: 184 EQQAKKLAKQQEEDSEEEEEDLDGDDWEDI------DSDEEL--------ECEDTEAMDD 229
E +A +EE+ EEEEED D D+ ED + +EE+ E +D E DD
Sbjct: 127 ENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYLMKEEIQDEEDDDD 186
Query: 230 VVEQDAEEEEAEEG 243
VE+ EEEE EEG
Sbjct: 187 YVEEGEEEEEEEEG 200
Score = 37.7 bits (86), Expect = 0.023
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 185 QQAKKLAKQQEEDSE----EEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEA 240
QQ L +ED+E EEE+D DGD ED + +EE E E ++ E++ EE+E
Sbjct: 92 QQITYLDGFDQEDNEAPDSEEEDDEDGD--EDDEEEEENEAGPPEGYEEEEEEEEEEDED 149
Query: 241 EE 242
E+
Sbjct: 150 ED 151
Score = 34.3 bits (77), Expect = 0.26
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 4/43 (9%)
Query: 205 LDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAEEGPPLG 247
LDG D ED ++ + E +D +D E D EEEE E GPP G
Sbjct: 97 LDGFDQEDNEAPDSEEEDD----EDGDEDDEEEEENEAGPPEG 135
>gi|109150435 ankyrin repeat and zinc finger domain containing 1
[Homo sapiens]
Length = 726
Score = 44.7 bits (104), Expect = 2e-04
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 6 CITCRVAFRDADMQRAHYKTDWHRYNLRRKVASMAPVTAEGFQER 50
C TC F++ QR HYK DWHR+NL++++ ++A F+++
Sbjct: 74 CSTCDQTFQNHQEQREHYKLDWHRFNLKQRLKDKPLLSALDFEKQ 118
>gi|109150425 ankyrin repeat and zinc finger domain containing 1
[Homo sapiens]
Length = 726
Score = 44.7 bits (104), Expect = 2e-04
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 6 CITCRVAFRDADMQRAHYKTDWHRYNLRRKVASMAPVTAEGFQER 50
C TC F++ QR HYK DWHR+NL++++ ++A F+++
Sbjct: 74 CSTCDQTFQNHQEQREHYKLDWHRFNLKQRLKDKPLLSALDFEKQ 118
>gi|42740903 MTERF domain containing 2 [Homo sapiens]
Length = 381
Score = 43.1 bits (100), Expect = 5e-04
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 9/67 (13%)
Query: 185 QQAKKLAKQQEEDSEEE---------EEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDA 235
Q KKL ++EE+SE +ED D DD ED D D+ E +D E D+ + D
Sbjct: 314 QVFKKLLAREEEESESSTSDDKRASLDEDEDDDDEEDNDEDDNDEDDDDEDDDEAEDNDE 373
Query: 236 EEEEAEE 242
+E++ EE
Sbjct: 374 DEDDDEE 380
Score = 35.8 bits (81), Expect = 0.088
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 188 KKLAKQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEE 239
K+ + ++ED + +EED D DD ++ D DE +D EA D+ ++D +EEE
Sbjct: 335 KRASLDEDEDDD-DEEDNDEDDNDEDDDDE----DDDEAEDNDEDEDDDEEE 381
Score = 33.5 bits (75), Expect = 0.44
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 184 EQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVE 232
+ + L + +++D EE+ ++ D D+ +D + D+E E D + DD E
Sbjct: 333 DDKRASLDEDEDDDDEEDNDEDDNDEDDDDEDDDEAEDNDEDEDDDEEE 381
>gi|7661690 coiled-coil domain containing 9 [Homo sapiens]
Length = 531
Score = 43.1 bits (100), Expect = 5e-04
Identities = 32/109 (29%), Positives = 49/109 (44%), Gaps = 15/109 (13%)
Query: 145 KKAPPAPAKEARNVVAVGTGGRGTHDRDPSEKPPRLQWFEQQAKKLAKQQEEDSEEEEED 204
K+ +PA E + T + T + P P A + ED EE E
Sbjct: 371 KEGAASPAPETPQPTSPETSPKETPMQPPEIPAP------------AHRPPEDEGEENEG 418
Query: 205 LDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAEEGPPLGAIPITD 253
+ ++WEDI DEE E + E D+ E+ A++ +A E P G IP ++
Sbjct: 419 EEDEEWEDISEDEEEEEIEVEEGDE--EEPAQDHQAPEAAPTG-IPCSE 464
>gi|225735631 mesoderm induction early response 1 isoform g [Homo
sapiens]
Length = 470
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 195 EEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAE 241
EED EEEEE+ +G+D ED D+D+ C +++ + +E+E +
Sbjct: 100 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQ 146
>gi|225735619 mesoderm induction early response 1 isoform i [Homo
sapiens]
Length = 370
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 195 EEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAE 241
EED EEEEE+ +G+D ED D+D+ C +++ + +E+E +
Sbjct: 20 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQ 66
>gi|225735617 mesoderm induction early response 1 isoform h [Homo
sapiens]
Length = 485
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 195 EEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAE 241
EED EEEEE+ +G+D ED D+D+ C +++ + +E+E +
Sbjct: 56 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQ 102
>gi|225735615 mesoderm induction early response 1 isoform a [Homo
sapiens]
Length = 529
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 195 EEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAE 241
EED EEEEE+ +G+D ED D+D+ C +++ + +E+E +
Sbjct: 100 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQ 146
>gi|118130872 mesoderm induction early response 1 isoform f [Homo
sapiens]
Length = 433
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 195 EEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAE 241
EED EEEEE+ +G+D ED D+D+ C +++ + +E+E +
Sbjct: 83 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQ 129
>gi|225735612 mesoderm induction early response 1 isoform e [Homo
sapiens]
Length = 486
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 195 EEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAE 241
EED EEEEE+ +G+D ED D+D+ C +++ + +E+E +
Sbjct: 136 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQ 182
>gi|225735610 mesoderm induction early response 1 isoform d [Homo
sapiens]
Length = 450
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 195 EEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAE 241
EED EEEEE+ +G+D ED D+D+ C +++ + +E+E +
Sbjct: 100 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQ 146
>gi|118130815 mesoderm induction early response 1 isoform c [Homo
sapiens]
Length = 512
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 195 EEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAE 241
EED EEEEE+ +G+D ED D+D+ C +++ + +E+E +
Sbjct: 83 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQ 129
>gi|225735607 mesoderm induction early response 1 isoform b [Homo
sapiens]
Length = 565
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 195 EEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAE 241
EED EEEEE+ +G+D ED D+D+ C +++ + +E+E +
Sbjct: 136 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQ 182
>gi|225735605 mesoderm induction early response 1 isoform a [Homo
sapiens]
Length = 529
Score = 42.7 bits (99), Expect = 7e-04
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 195 EEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAE 241
EED EEEEE+ +G+D ED D+D+ C +++ + +E+E +
Sbjct: 100 EEDEEEEEEEEEGEDDEDADNDDNSGCSGENKEENIKDSSGQEDETQ 146
>gi|5454088 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member B [Homo sapiens]
Length = 251
Score = 42.7 bits (99), Expect = 7e-04
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 4/64 (6%)
Query: 184 EQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEE----LECEDTEAMDDVVEQDAEEEE 239
+++ + + +ED EEEE D + D+ ED++ DE+ E E+ +D+ E + E+EE
Sbjct: 171 DEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGDEDDDEVSEEEEEFGLDEEDEDEDEDEE 230
Query: 240 AEEG 243
EEG
Sbjct: 231 EEEG 234
Score = 40.4 bits (93), Expect = 0.004
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 169 HDRDPSEKPPRLQWFEQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEE-LECEDTEAM 227
+DR+ E P + + + +++E++ E+EED D +D E+ + DEE E ED E
Sbjct: 148 YDREDQEAPDS----DAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDEDVEGD 203
Query: 228 DDVVEQDAEEEE 239
+D E EEEE
Sbjct: 204 EDDDEVSEEEEE 215
Score = 38.5 bits (88), Expect = 0.014
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 178 PRLQWFEQQAKKLAKQQEEDSE-----EEEEDLDGDDWEDIDSD--EELECEDTEAMDDV 230
P+L + + ++ + + D+E EEEED +G+D ED D + EE E ++ + D+
Sbjct: 140 PQLTYLDGYDREDQEAPDSDAEVDGVDEEEEDEEGEDEEDEDDEDGEEEEFDEEDDEDED 199
Query: 231 VEQDAEEEEAEE 242
VE D +++E E
Sbjct: 200 VEGDEDDDEVSE 211
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 42.7 bits (99), Expect = 7e-04
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 19/183 (10%)
Query: 70 TVCSKKFASFNAYENHLKSRRHVELEKKAVQAVNRKVEMMNEKNLEKGLGVDSVDKDAMN 129
+V S++ S + ++R V + K+ + +E+N K L D + + +
Sbjct: 63 SVHSRQLVSKPLSSSVSNNKRIVSTKGKSATEYKNEEYQRSERN--KRLDADRKIRLSSS 120
Query: 130 AAIQQAIKAQPSMS------PKKAPPAPAKEARNVVAVGTGGRGTHDRDPSEKPPRLQWF 183
A+ ++ K QP + P++ +P + + + R + S++ + +
Sbjct: 121 AS-REPYKNQPEKTCVRKRDPERRAKSPTPDGSERIGLEVDRRASRSSQSSKEEVNSEEY 179
Query: 184 ----EQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEE 239
E + + +Q ++E EEE ++ ED++ DEE+E ED E D+ V++D EEEE
Sbjct: 180 GSDHETGSSGSSDEQGNNTENEEEGVE----EDVEEDEEVE-EDAEE-DEEVDEDGEEEE 233
Query: 240 AEE 242
EE
Sbjct: 234 EEE 236
Score = 41.2 bits (95), Expect = 0.002
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 163 TGGRGTHDRDPSEKPPRLQWFEQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEELECE 222
TG G+ D + + E+ ++ + +E+ E+EE D DG++ E+ + +EE E
Sbjct: 185 TGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEE---E 241
Query: 223 DTEAMDDVVEQDAEEEEAEEG 243
+ E ++ EQD E ++ EEG
Sbjct: 242 EEEEEEEEYEQD-ERDQKEEG 261
Score = 35.0 bits (79), Expect = 0.15
Identities = 14/52 (26%), Positives = 32/52 (61%)
Query: 192 KQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAEEG 243
++ +ED EEEEE+ + ++ E+ + +EE E ++ + ++ + D E ++ G
Sbjct: 223 EEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSG 274
Score = 32.7 bits (73), Expect = 0.74
Identities = 13/52 (25%), Positives = 30/52 (57%)
Query: 192 KQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAEEG 243
+++EE+ EEEEE+ + +++E + D++ E D + + + +E +G
Sbjct: 232 EEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESVSFTDG 283
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 42.7 bits (99), Expect = 7e-04
Identities = 43/183 (23%), Positives = 85/183 (46%), Gaps = 19/183 (10%)
Query: 70 TVCSKKFASFNAYENHLKSRRHVELEKKAVQAVNRKVEMMNEKNLEKGLGVDSVDKDAMN 129
+V S++ S + ++R V + K+ + +E+N K L D + + +
Sbjct: 63 SVHSRQLVSKPLSSSVSNNKRIVSTKGKSATEYKNEEYQRSERN--KRLDADRKIRLSSS 120
Query: 130 AAIQQAIKAQPSMS------PKKAPPAPAKEARNVVAVGTGGRGTHDRDPSEKPPRLQWF 183
A+ ++ K QP + P++ +P + + + R + S++ + +
Sbjct: 121 AS-REPYKNQPEKTCVRKRDPERRAKSPTPDGSERIGLEVDRRASRSSQSSKEEVNSEEY 179
Query: 184 ----EQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEE 239
E + + +Q ++E EEE ++ ED++ DEE+E ED E D+ V++D EEEE
Sbjct: 180 GSDHETGSSGSSDEQGNNTENEEEGVE----EDVEEDEEVE-EDAEE-DEEVDEDGEEEE 233
Query: 240 AEE 242
EE
Sbjct: 234 EEE 236
Score = 41.2 bits (95), Expect = 0.002
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 163 TGGRGTHDRDPSEKPPRLQWFEQQAKKLAKQQEEDSEEEEEDLDGDDWEDIDSDEELECE 222
TG G+ D + + E+ ++ + +E+ E+EE D DG++ E+ + +EE E
Sbjct: 185 TGSSGSSDEQGNNTENEEEGVEEDVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEE---E 241
Query: 223 DTEAMDDVVEQDAEEEEAEEG 243
+ E ++ EQD E ++ EEG
Sbjct: 242 EEEEEEEEYEQD-ERDQKEEG 261
Score = 35.0 bits (79), Expect = 0.15
Identities = 14/52 (26%), Positives = 32/52 (61%)
Query: 192 KQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAEEG 243
++ +ED EEEEE+ + ++ E+ + +EE E ++ + ++ + D E ++ G
Sbjct: 223 EEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSG 274
Score = 32.7 bits (73), Expect = 0.74
Identities = 13/52 (25%), Positives = 30/52 (57%)
Query: 192 KQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAEEG 243
+++EE+ EEEEE+ + +++E + D++ E D + + + +E +G
Sbjct: 232 EEEEEEEEEEEEEEEEEEYEQDERDQKEEGNDYDTRSEASDSGSESVSFTDG 283
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 42.4 bits (98), Expect = 0.001
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 192 KQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAEE 242
+ EE EEEEE+ + ++ E DS+EE ED E M + E D EE+E EE
Sbjct: 438 EDDEESDEEEEEEEEEEEEEATDSEEE---EDLEQMQEGQEDDEEEDEEEE 485
Score = 30.8 bits (68), Expect = 2.8
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 190 LAKQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEE-EEAEE 242
+A Q + E D + D+ D + +EE E E+ EA D E+D E+ +E +E
Sbjct: 422 MASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQE 475
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 42.4 bits (98), Expect = 0.001
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 192 KQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEEEEAEE 242
+ EE EEEEE+ + ++ E DS+EE ED E M + E D EE+E EE
Sbjct: 438 EDDEESDEEEEEEEEEEEEEATDSEEE---EDLEQMQEGQEDDEEEDEEEE 485
Score = 30.8 bits (68), Expect = 2.8
Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 190 LAKQQEEDSEEEEEDLDGDDWEDIDSDEELECEDTEAMDDVVEQDAEE-EEAEE 242
+A Q + E D + D+ D + +EE E E+ EA D E+D E+ +E +E
Sbjct: 422 MASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQE 475
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.129 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,723,801
Number of Sequences: 37866
Number of extensions: 929732
Number of successful extensions: 17515
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 312
Number of HSP's successfully gapped in prelim test: 418
Number of HSP's that attempted gapping in prelim test: 9384
Number of HSP's gapped (non-prelim): 4509
length of query: 477
length of database: 18,247,518
effective HSP length: 106
effective length of query: 371
effective length of database: 14,233,722
effective search space: 5280710862
effective search space used: 5280710862
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.