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Search of human proteins with 154707916
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|154707916 glutathione S-transferase, C-terminal domain
containing isoform 2 [Homo sapiens]
(546 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|154707916 glutathione S-transferase, C-terminal domain contai... 1109 0.0
gi|149588660 glutathione S-transferase, C-terminal domain contai... 1003 0.0
gi|4758862 eukaryotic translation elongation factor 1 epsilon 1 ... 38 0.021
gi|87299628 biorientation of chromosomes in cell division 1-like... 33 0.51
gi|110349719 titin isoform N2-A [Homo sapiens] 33 0.67
gi|110349717 titin isoform novex-2 [Homo sapiens] 33 0.67
gi|110349713 titin isoform novex-1 [Homo sapiens] 33 0.67
gi|110349715 titin isoform N2-B [Homo sapiens] 33 0.67
gi|8659574 transcription factor E3 [Homo sapiens] 33 0.67
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 32 1.5
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 32 1.5
gi|9966827 PEST proteolytic signal containing nuclear protein [H... 32 1.5
gi|33188443 microfilament and actin filament cross-linker protei... 32 2.0
gi|33188445 microfilament and actin filament cross-linker protei... 32 2.0
gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein [... 31 2.5
gi|118421085 leucine-rich repeat kinase 1 [Homo sapiens] 31 3.3
gi|62177127 myosin heavy chain Myr 8 [Homo sapiens] 31 3.3
gi|34482047 adaptor-related protein complex 3, beta 2 subunit [H... 30 4.3
gi|51479173 dynein, axonemal, heavy chain 11 [Homo sapiens] 30 4.3
gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sap... 30 4.3
gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sap... 30 4.3
gi|156564240 coiled-coil domain containing 104 [Homo sapiens] 30 4.3
gi|87162461 fragile X mental retardation 2 [Homo sapiens] 30 5.7
gi|119703749 hydrocephalus inducing isoform a [Homo sapiens] 30 5.7
gi|239751532 PREDICTED: similar to vacuolar protein sorting 53 (... 30 7.4
gi|239746043 PREDICTED: hypothetical protein XP_002343642 [Homo ... 30 7.4
gi|126362971 serine/threonine kinase 10 [Homo sapiens] 30 7.4
gi|53829385 leucine rich repeat containing 37B [Homo sapiens] 30 7.4
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 29 9.7
>gi|154707916 glutathione S-transferase, C-terminal domain
containing isoform 2 [Homo sapiens]
Length = 546
Score = 1109 bits (2868), Expect = 0.0
Identities = 546/546 (100%), Positives = 546/546 (100%)
Query: 1 MKAIKKSLTEEEYLYLDFSHQTEGCIFPLHTSVTLFLLSYCDCKIFKICLVVTKEVSQWT 60
MKAIKKSLTEEEYLYLDFSHQTEGCIFPLHTSVTLFLLSYCDCKIFKICLVVTKEVSQWT
Sbjct: 1 MKAIKKSLTEEEYLYLDFSHQTEGCIFPLHTSVTLFLLSYCDCKIFKICLVVTKEVSQWT 60
Query: 61 RLCELTIPLAIENFLRESSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKADG 120
RLCELTIPLAIENFLRESSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKADG
Sbjct: 61 RLCELTIPLAIENFLRESSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKADG 120
Query: 121 VGPPLTKGKAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEEPATTNREPSHIRKAKA 180
VGPPLTKGKAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEEPATTNREPSHIRKAKA
Sbjct: 121 VGPPLTKGKAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEEPATTNREPSHIRKAKA 180
Query: 181 SDLPPLEHVFAEGLYFTLADIVLLPCIHHFLVIISRKFSEKLVEFPLLASWYQRIQEVPG 240
SDLPPLEHVFAEGLYFTLADIVLLPCIHHFLVIISRKFSEKLVEFPLLASWYQRIQEVPG
Sbjct: 181 SDLPPLEHVFAEGLYFTLADIVLLPCIHHFLVIISRKFSEKLVEFPLLASWYQRIQEVPG 240
Query: 241 VKTAASKCGIQFLHLPKLLTTSTEQHPNLCEVPGVEEQSDPLFIGGPRPTMAKLMEKGIE 300
VKTAASKCGIQFLHLPKLLTTSTEQHPNLCEVPGVEEQSDPLFIGGPRPTMAKLMEKGIE
Sbjct: 241 VKTAASKCGIQFLHLPKLLTTSTEQHPNLCEVPGVEEQSDPLFIGGPRPTMAKLMEKGIE 300
Query: 301 VMFSPHPCPTWTLDWNVLPAAVSPKEGKMSSDRALRKQQQLNNLVYVVTNQAKPGDRIVD 360
VMFSPHPCPTWTLDWNVLPAAVSPKEGKMSSDRALRKQQQLNNLVYVVTNQAKPGDRIVD
Sbjct: 301 VMFSPHPCPTWTLDWNVLPAAVSPKEGKMSSDRALRKQQQLNNLVYVVTNQAKPGDRIVD 360
Query: 361 FCSGGGHVGIVLAHMLPSCQVTLIENKELSLIRAKKRSDELGLSNIWFIQANMEYFTGMF 420
FCSGGGHVGIVLAHMLPSCQVTLIENKELSLIRAKKRSDELGLSNIWFIQANMEYFTGMF
Sbjct: 361 FCSGGGHVGIVLAHMLPSCQVTLIENKELSLIRAKKRSDELGLSNIWFIQANMEYFTGMF 420
Query: 421 NIGVALHACGVATDMVIEHCIKTRASFVTCPCCYGFIQNTSKFNFPKSEQFKKTLSYKEH 480
NIGVALHACGVATDMVIEHCIKTRASFVTCPCCYGFIQNTSKFNFPKSEQFKKTLSYKEH
Sbjct: 421 NIGVALHACGVATDMVIEHCIKTRASFVTCPCCYGFIQNTSKFNFPKSEQFKKTLSYKEH 480
Query: 481 MILCRFADQTAVQLPPQRRLIGKQCMCLVDLDRARAAEECGYSVQVISMEPESCSPKNNM 540
MILCRFADQTAVQLPPQRRLIGKQCMCLVDLDRARAAEECGYSVQVISMEPESCSPKNNM
Sbjct: 481 MILCRFADQTAVQLPPQRRLIGKQCMCLVDLDRARAAEECGYSVQVISMEPESCSPKNNM 540
Query: 541 IVGVPI 546
IVGVPI
Sbjct: 541 IVGVPI 546
>gi|149588660 glutathione S-transferase, C-terminal domain
containing isoform 1 [Homo sapiens]
Length = 633
Score = 1003 bits (2594), Expect = 0.0
Identities = 495/500 (99%), Positives = 495/500 (99%)
Query: 47 KICLVVTKEVSQWTRLCELTIPLAIENFLRESSDQPPTIPVEILQLEKKLSEPVRVHNDD 106
K CL EVSQWTRLCELTIPLAIENFLRESSDQPPTIPVEILQLEKKLSEPVRVHNDD
Sbjct: 134 KTCLKACAEVSQWTRLCELTIPLAIENFLRESSDQPPTIPVEILQLEKKLSEPVRVHNDD 193
Query: 107 KLRRQKLKQQKADGVGPPLTKGKAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEEPA 166
KLRRQKLKQQKADGVGPPLTKGKAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEEPA
Sbjct: 194 KLRRQKLKQQKADGVGPPLTKGKAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEEPA 253
Query: 167 TTNREPSHIRKAKASDLPPLEHVFAEGLYFTLADIVLLPCIHHFLVIISRKFSEKLVEFP 226
TTNREPSHIRKAKASDLPPLEHVFAEGLYFTLADIVLLPCIHHFLVIISRKFSEKLVEFP
Sbjct: 254 TTNREPSHIRKAKASDLPPLEHVFAEGLYFTLADIVLLPCIHHFLVIISRKFSEKLVEFP 313
Query: 227 LLASWYQRIQEVPGVKTAASKCGIQFLHLPKLLTTSTEQHPNLCEVPGVEEQSDPLFIGG 286
LLASWYQRIQEVPGVKTAASKCGIQFLHLPKLLTTSTEQHPNLCEVPGVEEQSDPLFIGG
Sbjct: 314 LLASWYQRIQEVPGVKTAASKCGIQFLHLPKLLTTSTEQHPNLCEVPGVEEQSDPLFIGG 373
Query: 287 PRPTMAKLMEKGIEVMFSPHPCPTWTLDWNVLPAAVSPKEGKMSSDRALRKQQQLNNLVY 346
PRPTMAKLMEKGIEVMFSPHPCPTWTLDWNVLPAAVSPKEGKMSSDRALRKQQQLNNLVY
Sbjct: 374 PRPTMAKLMEKGIEVMFSPHPCPTWTLDWNVLPAAVSPKEGKMSSDRALRKQQQLNNLVY 433
Query: 347 VVTNQAKPGDRIVDFCSGGGHVGIVLAHMLPSCQVTLIENKELSLIRAKKRSDELGLSNI 406
VVTNQAKPGDRIVDFCSGGGHVGIVLAHMLPSCQVTLIENKELSLIRAKKRSDELGLSNI
Sbjct: 434 VVTNQAKPGDRIVDFCSGGGHVGIVLAHMLPSCQVTLIENKELSLIRAKKRSDELGLSNI 493
Query: 407 WFIQANMEYFTGMFNIGVALHACGVATDMVIEHCIKTRASFVTCPCCYGFIQNTSKFNFP 466
WFIQANMEYFTGMFNIGVALHACGVATDMVIEHCIKTRASFVTCPCCYGFIQNTSKFNFP
Sbjct: 494 WFIQANMEYFTGMFNIGVALHACGVATDMVIEHCIKTRASFVTCPCCYGFIQNTSKFNFP 553
Query: 467 KSEQFKKTLSYKEHMILCRFADQTAVQLPPQRRLIGKQCMCLVDLDRARAAEECGYSVQV 526
KSEQFKKTLSYKEHMILCRFADQTAVQLPPQRRLIGKQCMCLVDLDRARAAEECGYSVQV
Sbjct: 554 KSEQFKKTLSYKEHMILCRFADQTAVQLPPQRRLIGKQCMCLVDLDRARAAEECGYSVQV 613
Query: 527 ISMEPESCSPKNNMIVGVPI 546
ISMEPESCSPKNNMIVGVPI
Sbjct: 614 ISMEPESCSPKNNMIVGVPI 633
Score = 122 bits (306), Expect = 8e-28
Identities = 61/85 (71%), Positives = 68/85 (80%)
Query: 1 MKAIKKSLTEEEYLYLDFSHQTEGCIFPLHTSVTLFLLSYCDCKIFKICLVVTKEVSQWT 60
MKAIKKSLTEEEYLYLDFSHQTEGCIFPLHTSVTLFLLSYCDCKIFKICLVVTKEVS+ +
Sbjct: 1 MKAIKKSLTEEEYLYLDFSHQTEGCIFPLHTSVTLFLLSYCDCKIFKICLVVTKEVSRDS 60
Query: 61 RLCELTIPLAIENFLRESSDQPPTI 85
L + +E + + PP +
Sbjct: 61 SLLRDDLIQDVEIQIISRQELPPIV 85
>gi|4758862 eukaryotic translation elongation factor 1 epsilon 1
isoform 1 [Homo sapiens]
Length = 174
Score = 38.1 bits (87), Expect = 0.021
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 187 EHVFAEGLYFTLADIVLLPCIHHFLVIISRKFSEKLVEFPLLASWYQRIQEVPGVK 242
+ V+ G FTLADI+L +H F+V ++ + EK + ++ W+ IQ PG++
Sbjct: 104 DKVYLTGYNFTLADILLYYGLHRFIVDLTVQEKEKYLN---VSRWFCHIQHYPGIR 156
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 33.5 bits (75), Expect = 0.51
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 27/141 (19%)
Query: 79 SDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKADGVGPPLTKGKAKSKVHTQE 138
SD T+ + K+ E + ++ + ++ ++QKA+ TKG+ +S V +E
Sbjct: 484 SDDELTVEQRRQSIAKEKEERLLRRQINREKLEEKRKQKAEKTKSSKTKGQGRSSVDLEE 543
Query: 139 TS-EGLDSSS----------KSLELKVAFS----------------KLTVQEEPATTNRE 171
+S + L+ + K LE KVA S K +E+ T +
Sbjct: 544 SSTKSLEPKAARIKEVLKERKVLEKKVALSKKRKKDSRNVEENSKKKQQYEEDSKETLKT 603
Query: 172 PSHIRKAKASDLPPLEHVFAE 192
H K K S L+HV A+
Sbjct: 604 SEHCEKEKISSSKELKHVHAK 624
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 33.1 bits (74), Expect = 0.67
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 305 PHPCPTWTLDWNVLPAAVSPKEGKMSSDRALRKQQQLNNLVYVVTNQAKPGDR----IVD 360
P P TW ++ LP + + +SS ++ Q+ + VY + + + G+R IVD
Sbjct: 16552 PPPTVTWNMNERTLPQEATIETTAISSSMVIKNCQRSHQGVYSLLAKNEAGERKKTIIVD 16611
Query: 361 FCSGGGHVGI-VLAHML--PSCQVT 382
G VG LAH L SC++T
Sbjct: 16612 VLDVPGPVGTPFLAHNLTNESCKLT 16636
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 33.1 bits (74), Expect = 0.67
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 305 PHPCPTWTLDWNVLPAAVSPKEGKMSSDRALRKQQQLNNLVYVVTNQAKPGDR----IVD 360
P P TW ++ LP + + +SS ++ Q+ + VY + + + G+R IVD
Sbjct: 10247 PPPTVTWNMNERTLPQEATIETTAISSSMVIKNCQRSHQGVYSLLAKNEAGERKKTIIVD 10306
Query: 361 FCSGGGHVGI-VLAHML--PSCQVT 382
G VG LAH L SC++T
Sbjct: 10307 VLDVPGPVGTPFLAHNLTNESCKLT 10331
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 33.1 bits (74), Expect = 0.67
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 305 PHPCPTWTLDWNVLPAAVSPKEGKMSSDRALRKQQQLNNLVYVVTNQAKPGDR----IVD 360
P P TW ++ LP + + +SS ++ Q+ + VY + + + G+R IVD
Sbjct: 10180 PPPTVTWNMNERTLPQEATIETTAISSSMVIKNCQRSHQGVYSLLAKNEAGERKKTIIVD 10239
Query: 361 FCSGGGHVGI-VLAHML--PSCQVT 382
G VG LAH L SC++T
Sbjct: 10240 VLDVPGPVGTPFLAHNLTNESCKLT 10264
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 33.1 bits (74), Expect = 0.67
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 305 PHPCPTWTLDWNVLPAAVSPKEGKMSSDRALRKQQQLNNLVYVVTNQAKPGDR----IVD 360
P P TW ++ LP + + +SS ++ Q+ + VY + + + G+R IVD
Sbjct: 10055 PPPTVTWNMNERTLPQEATIETTAISSSMVIKNCQRSHQGVYSLLAKNEAGERKKTIIVD 10114
Query: 361 FCSGGGHVGI-VLAHML--PSCQVT 382
G VG LAH L SC++T
Sbjct: 10115 VLDVPGPVGTPFLAHNLTNESCKLT 10139
>gi|8659574 transcription factor E3 [Homo sapiens]
Length = 575
Score = 33.1 bits (74), Expect = 0.67
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 78 SSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKADGVGPPL 125
S P +P E+L+++ L P R H + RRQ++KQ + +GP L
Sbjct: 165 SRPPPAQVPREVLKVQTHLENPTRYHL-QQARRQQVKQYLSTTLGPKL 211
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 32.0 bits (71), Expect = 1.5
Identities = 33/133 (24%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 38 LSYCDCKIFKICLVVTKEVSQWTRLCELTIPLAIENFLRESSDQP--PTIPVEILQLEKK 95
LS+ + L TKE S+ T +I + EN ++E+S+ P P + Q K
Sbjct: 1374 LSFSSLESLSSELEQTKEFSKRTE----SIAVQAENLVKEASEIPLGPQNKQLLQQQAKS 1429
Query: 96 LSEPVRVHND---DKLRRQKLKQQKADGVGPPLTKGKAKSKVHTQETSE--GLDSSSKSL 150
+ E V+ D + ++ ++ + K D G + + S T++ E L++SS ++
Sbjct: 1430 IKEQVKKLEDTLEEDIKTMEMVKTKWDHFG---SNFETLSVWITEKEKELNALETSSSAM 1486
Query: 151 ELKVAFSKLTVQE 163
+++++ K+T+QE
Sbjct: 1487 DMQISQIKVTIQE 1499
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 32.0 bits (71), Expect = 1.5
Identities = 33/133 (24%), Positives = 66/133 (49%), Gaps = 14/133 (10%)
Query: 38 LSYCDCKIFKICLVVTKEVSQWTRLCELTIPLAIENFLRESSDQP--PTIPVEILQLEKK 95
LS+ + L TKE S+ T +I + EN ++E+S+ P P + Q K
Sbjct: 1367 LSFSSLESLSSELEQTKEFSKRTE----SIAVQAENLVKEASEIPLGPQNKQLLQQQAKS 1422
Query: 96 LSEPVRVHND---DKLRRQKLKQQKADGVGPPLTKGKAKSKVHTQETSE--GLDSSSKSL 150
+ E V+ D + ++ ++ + K D G + + S T++ E L++SS ++
Sbjct: 1423 IKEQVKKLEDTLEEDIKTMEMVKTKWDHFG---SNFETLSVWITEKEKELNALETSSSAM 1479
Query: 151 ELKVAFSKLTVQE 163
+++++ K+T+QE
Sbjct: 1480 DMQISQIKVTIQE 1492
>gi|9966827 PEST proteolytic signal containing nuclear protein [Homo
sapiens]
Length = 178
Score = 32.0 bits (71), Expect = 1.5
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 114 KQQKADGVGPPLTKGKAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEEPATTNREPS 173
K Q+A G P + + K T +S G +SSS+S E K + +EE A +P+
Sbjct: 13 KSQRAGAAGGPEEEAEKPVKTKTVSSSNGGESSSRSAE------KRSAEEEAADLPTKPT 66
Query: 174 HIRK 177
I K
Sbjct: 67 KISK 70
>gi|33188443 microfilament and actin filament cross-linker protein
isoform b [Homo sapiens]
Length = 5938
Score = 31.6 bits (70), Expect = 2.0
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 9/97 (9%)
Query: 59 WTRLCELTIPLAIENFLRESSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKA 118
W + CE + E L ++ P + E L K+L E + H + QK+ +
Sbjct: 2449 WMQACEANV----EKLLSDTVASDPGVLQEQLATTKQLQEELAEHQVPVEKLQKVARDIM 2504
Query: 119 DGVGPPLTKGKAKSKVHTQETSEGLDSSSKSLELKVA 155
+ G P A H QET++ + S +SL +A
Sbjct: 2505 EIEGEP-----APDHRHVQETTDSILSHFQSLSYSLA 2536
>gi|33188445 microfilament and actin filament cross-linker protein
isoform a [Homo sapiens]
Length = 5430
Score = 31.6 bits (70), Expect = 2.0
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 9/97 (9%)
Query: 59 WTRLCELTIPLAIENFLRESSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKA 118
W + CE + E L ++ P + E L K+L E + H + QK+ +
Sbjct: 1947 WMQACEANV----EKLLSDTVASDPGVLQEQLATTKQLQEELAEHQVPVEKLQKVARDIM 2002
Query: 119 DGVGPPLTKGKAKSKVHTQETSEGLDSSSKSLELKVA 155
+ G P A H QET++ + S +SL +A
Sbjct: 2003 EIEGEP-----APDHRHVQETTDSILSHFQSLSYSLA 2034
>gi|56550039 myeloid/lymphoid or mixed-lineage leukemia protein
[Homo sapiens]
Length = 3969
Score = 31.2 bits (69), Expect = 2.5
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 7/88 (7%)
Query: 106 DKLRRQKLKQQKADGVGPPLTKGKAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEEP 165
DK++++ K + PP G H ++ SE L +K LK ++ P
Sbjct: 208 DKIKKKDSKSIEKKRGRPPTFPGVKIKITHGKDISE-LPKGNKEDSLK------KIKRTP 260
Query: 166 ATTNREPSHIRKAKASDLPPLEHVFAEG 193
+ T ++ + I+K +A L PL+ F G
Sbjct: 261 SATFQQATKIKKLRAGKLSPLKSKFKTG 288
>gi|118421085 leucine-rich repeat kinase 1 [Homo sapiens]
Length = 1910
Score = 30.8 bits (68), Expect = 3.3
Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 25/132 (18%)
Query: 71 IENFLRESSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKADGVGPPLTKGKA 130
+ +F ++ SDQ PV+ ++ K L L ++ + P KG A
Sbjct: 1043 VHSFQQDKSDQRENSPVQSIRSPKSL----------------LFGAMSEMISPS-EKGSA 1085
Query: 131 KSKVHTQETSE-----GLDSSSKSLELKVAFSKLT---VQEEPATTNREPSHIRKAKASD 182
+ K ++ T + + KS + ++FSK T + P T P ++K+ A
Sbjct: 1086 RMKKRSRNTLDSEVPAAYQTPKKSHQKSLSFSKTTPRRISHTPQTPLYTPERLQKSPAKM 1145
Query: 183 LPPLEHVFAEGL 194
P + F E L
Sbjct: 1146 TPTKQAAFKESL 1157
>gi|62177127 myosin heavy chain Myr 8 [Homo sapiens]
Length = 1858
Score = 30.8 bits (68), Expect = 3.3
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 78 SSDQPPTIPVEILQL---EKKLSEPVRVHNDDKLRRQKLKQQKADGVGP 123
+SD+ P P+E+ +L E L PV+ L Q K QK DG P
Sbjct: 1505 ASDESPLTPLEVKKLPVLETNLKYPVQPEGSSPLSPQYSKSQKGDGDRP 1553
>gi|34482047 adaptor-related protein complex 3, beta 2 subunit [Homo
sapiens]
Length = 1082
Score = 30.4 bits (67), Expect = 4.3
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 12/84 (14%)
Query: 104 NDDKLRRQKLKQQKADGVGPPLTKGKAKSKV-----HTQETSEGLDSSSKSLELKVAFSK 158
+++K R + +Q + DG K K K KV + EG DSSS S E ++
Sbjct: 726 DEEKGRGSESEQSEEDG------KRKTKKKVPERKGEASSSDEGSDSSSSSSESEMTSES 779
Query: 159 LTVQEEPATTNRE-PSHIRKAKAS 181
Q EPA+ +R+ P + A A+
Sbjct: 780 EEEQLEPASWSRKTPPSSKSAPAT 803
>gi|51479173 dynein, axonemal, heavy chain 11 [Homo sapiens]
Length = 4523
Score = 30.4 bits (67), Expect = 4.3
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 311 WTLDWNVLPAAVSPKEGKMSSDRALRKQQ--QLNNLVYVVTNQAKPGDR--IVDFCSGGG 366
WT D + + + +EG ++ + K+Q QLN L+ ++ + PGDR I+ C+
Sbjct: 1755 WTTDVGIAFSRL--EEGYETALKDFHKKQISQLNTLITLLLGELPPGDRQKIMTICTIDV 1812
Query: 367 HVGIVLAHMLPSCQVTL 383
H V+A ++ QV +
Sbjct: 1813 HARDVVAKLISQKQVVV 1829
>gi|33620716 retinoblastoma-binding protein 6 isoform 2 [Homo sapiens]
Length = 1758
Score = 30.4 bits (67), Expect = 4.3
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 76 RESSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKADGVGPPLTKGKAKSKVH 135
+ + + T PV+ +++K S+ V+ +KL ++ K +K + PL K K
Sbjct: 1060 KSAKEHQETKPVKEEKVKKDYSKDVK---SEKLTTKEEKAKKPNEKNKPLDNKGEKRKRK 1116
Query: 136 TQETSEGLDSSSKSLELKVAFSKLTVQE 163
T+E +G+D +S +K+ SKL V E
Sbjct: 1117 TEE--KGVDKDFESSSMKI--SKLEVTE 1140
>gi|33620769 retinoblastoma-binding protein 6 isoform 1 [Homo sapiens]
Length = 1792
Score = 30.4 bits (67), Expect = 4.3
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 76 RESSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKADGVGPPLTKGKAKSKVH 135
+ + + T PV+ +++K S+ V+ +KL ++ K +K + PL K K
Sbjct: 1094 KSAKEHQETKPVKEEKVKKDYSKDVK---SEKLTTKEEKAKKPNEKNKPLDNKGEKRKRK 1150
Query: 136 TQETSEGLDSSSKSLELKVAFSKLTVQE 163
T+E +G+D +S +K+ SKL V E
Sbjct: 1151 TEE--KGVDKDFESSSMKI--SKLEVTE 1174
>gi|156564240 coiled-coil domain containing 104 [Homo sapiens]
Length = 342
Score = 30.4 bits (67), Expect = 4.3
Identities = 36/178 (20%), Positives = 72/178 (40%), Gaps = 9/178 (5%)
Query: 23 EGCIFPL---HTSVTLF--LLSYCDCKIFKICLVVTKEVSQWTRLCELTIPL--AIENFL 75
E C PL HTS + +L+ D IFK ++V K + + + + + L
Sbjct: 81 EACTSPLAKTHTSQAILQPVLAAEDFTIFK-AMMVQKNIEMQLQAIRIIQERNGVLPDCL 139
Query: 76 RESSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKADGVGPPLTKGKAKSKVH 135
+ SD + E +++ +++ + D + R++ KQ P T +++ +
Sbjct: 140 TDGSDVVSDLEHEEMKILREVLRKSKEEYDQEEERKRKKQLSEAKTEEP-TVHSSEAAIM 198
Query: 136 TQETSEGLDSSSKSLELKVAFSKLTVQEEPATTNREPSHIRKAKASDLPPLEHVFAEG 193
+G + E+K+ F+ +++ R + K +P LEH EG
Sbjct: 199 NNSQGDGEHFAHPPSEVKMHFANQSIEPLGRKVERSETSSLPQKDLKIPGLEHASIEG 256
>gi|87162461 fragile X mental retardation 2 [Homo sapiens]
Length = 1311
Score = 30.0 bits (66), Expect = 5.7
Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 5/105 (4%)
Query: 71 IENFLRESSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKADGVGPPLTK--- 127
+E+ L+ SSD+ PV+ L + +E + K R + A PP +
Sbjct: 423 LEDDLKLSSDEDDLEPVKTLTTQCTATELYQAVEKAKPRNNPVNPPLATPQPPPAVQASG 482
Query: 128 --GKAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEEPATTNR 170
G + + E+ +SS+ E A T + EP +TN+
Sbjct: 483 GSGSSSESESSSESDSDTESSTTDSESNEAPRVATPEPEPPSTNK 527
>gi|119703749 hydrocephalus inducing isoform a [Homo sapiens]
Length = 5120
Score = 30.0 bits (66), Expect = 5.7
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 3/102 (2%)
Query: 64 ELTIPLAIENFLRESSDQPPTIPVEILQLEKKLSEPVRVHNDDKL-RRQKLKQQKADGVG 122
+LT I+ LRE + + +Q +K E R +D+L RR K +Q
Sbjct: 2314 KLTFDRGIQQALRERKKREQERLAKEMQEKKLQQELERQKEEDELKRRVKKGKQGPIKEE 2373
Query: 123 PPLTKGKAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEE 164
PP+ K +A +K T +D +++E K++ + T+ E+
Sbjct: 2374 PPMKKSQAANKQVPPLTK--VDVKMETIERKISVREQTMSEK 2413
>gi|239751532 PREDICTED: similar to vacuolar protein sorting 53
(yeast) (predicted) [Homo sapiens]
Length = 188
Score = 29.6 bits (65), Expect = 7.4
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Query: 165 PATTNREPSHIRKAKASDLPPLEHVFAEGLY---FTLADIVLLPCIHHFLVIISRKFSEK 221
P RE HI F +G+ + LA++V P LV++ + +
Sbjct: 10 PKLLEREQRHISSPGLPSGIAAPDPFGKGIQRCRWLLAEVVTAP--QELLVVLVDNYIKL 67
Query: 222 LVEFPLLASWYQRIQEVPGVKTAASKCGIQFLHLP-KLLTTSTEQHPNLCEVPGVEEQ 278
+ A +++I ++ G+K ++FLHLP +L E +L +P EQ
Sbjct: 68 FTDCNTEA--FRKILDMKGMKRNKQSSMLEFLHLPLPMLPLGVESSSSLSLMPPTPEQ 123
>gi|239746043 PREDICTED: hypothetical protein XP_002343642 [Homo
sapiens]
Length = 188
Score = 29.6 bits (65), Expect = 7.4
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 8/118 (6%)
Query: 165 PATTNREPSHIRKAKASDLPPLEHVFAEGLY---FTLADIVLLPCIHHFLVIISRKFSEK 221
P RE HI F +G+ + LA++V P LV++ + +
Sbjct: 10 PKLLGREQRHISSPGLPSGIAAPDPFGKGIQRCRWLLAEVVTAP--QELLVVLVDNYIKL 67
Query: 222 LVEFPLLASWYQRIQEVPGVKTAASKCGIQFLHLP-KLLTTSTEQHPNLCEVPGVEEQ 278
+ A +++I ++ G+K ++FLHLP +L E +L +P EQ
Sbjct: 68 FTDCNTEA--FRKILDMKGMKRNKQSSMLEFLHLPLPMLPLGVESSSSLSLMPPTPEQ 123
>gi|126362971 serine/threonine kinase 10 [Homo sapiens]
Length = 968
Score = 29.6 bits (65), Expect = 7.4
Identities = 15/77 (19%), Positives = 39/77 (50%)
Query: 88 EILQLEKKLSEPVRVHNDDKLRRQKLKQQKADGVGPPLTKGKAKSKVHTQETSEGLDSSS 147
E+L+ +K E ++ +N + + K++QQ+ P + + + K+++ + S ++
Sbjct: 772 ELLRKHEKEREQMQRYNQRMIEQLKVRQQQEKARLPKIQRSEGKTRMAMYKKSLHINGGG 831
Query: 148 KSLELKVAFSKLTVQEE 164
+ E + + + QEE
Sbjct: 832 SAAEQREKIKQFSQQEE 848
>gi|53829385 leucine rich repeat containing 37B [Homo sapiens]
Length = 947
Score = 29.6 bits (65), Expect = 7.4
Identities = 43/182 (23%), Positives = 74/182 (40%), Gaps = 38/182 (20%)
Query: 20 HQTEGCIFPLHTSV---TLFLLSYCDCKIFKICLVVTKEVSQWTRLCELTIPLAIENFLR 76
HQ + + PL + V T F++S + K K++++ L E+ + I + L
Sbjct: 166 HQADEILVPLDSKVSRPTKFVVSPKNLK---------KDLAERWSLPEI---VGIPHQLS 213
Query: 77 ESSDQPPTIPVEILQLEK----KLSEPVRVHNDDKLRRQKLKQQKADGVGPP----LTKG 128
+ Q T+P + L ++ L +RV+ D+ GPP L++
Sbjct: 214 KPQRQKQTLPDDYLSMDTLYPGSLPPELRVNADEP-------------PGPPEQVGLSQF 260
Query: 129 KAKSKVHTQETSEGLDSSSKSLELKVAFSKLTVQEEPATTNREPSHIRKAKASDL--PPL 186
+ K ET E + SSS E +L + EP+T P+ ++ L PL
Sbjct: 261 HLEPKSQNPETLEDIQSSSLQEEAPAQLLQLPQEVEPSTQQEAPALPPESSMESLAQTPL 320
Query: 187 EH 188
H
Sbjct: 321 NH 322
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 29.3 bits (64), Expect = 9.7
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Query: 76 RESSDQPPTIPVEILQLEKKLSEPVRVHNDDKLRRQKLKQQKADGVG--PPLTKGKAKSK 133
+ES + ++ EILQL+++L+ R + R +L + + L K + +
Sbjct: 1676 KESEKKLKSLEAEILQLQEELASSERARRHAEQERDELADEITNSASGKSALLDEKRRLE 1735
Query: 134 VHTQETSEGLDSSSKSLE-LKVAFSKLTVQEEPATTNREPSHIRKA 178
+ E L+ ++E L F K T+Q + T N E + R A
Sbjct: 1736 ARIAQLEEELEEEQSNMELLNDRFRKTTLQVD--TLNAELAAERSA 1779
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.409
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,608,762
Number of Sequences: 37866
Number of extensions: 971640
Number of successful extensions: 2493
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 2465
Number of HSP's gapped (non-prelim): 52
length of query: 546
length of database: 18,247,518
effective HSP length: 107
effective length of query: 439
effective length of database: 14,195,856
effective search space: 6231980784
effective search space used: 6231980784
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.