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Search of human proteins with 154350213
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|154350213 hypothetical protein LOC79591 [Homo sapiens]
(689 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|154350213 hypothetical protein LOC79591 [Homo sapiens] 1365 0.0
gi|42476164 POU class 2 homeobox 1 [Homo sapiens] 36 0.14
gi|209969838 transportin 2 (importin 3, karyopherin beta 2b) iso... 35 0.30
gi|209969836 transportin 2 (importin 3, karyopherin beta 2b) iso... 35 0.30
gi|48675813 transportin 2 (importin 3, karyopherin beta 2b) isof... 35 0.30
gi|4507379 TATA box binding protein [Homo sapiens] 33 0.88
gi|148664209 kelch-like 10 [Homo sapiens] 33 1.2
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 32 1.5
gi|189181722 proteoglycan 4 isoform C [Homo sapiens] 32 1.5
gi|189181720 proteoglycan 4 isoform B [Homo sapiens] 32 1.5
gi|67190163 proteoglycan 4 isoform A [Homo sapiens] 32 1.5
gi|41281612 zinc finger protein 828 [Homo sapiens] 32 1.5
gi|33946321 ninein isoform 5 [Homo sapiens] 31 3.3
gi|148536871 ninein isoform 1 [Homo sapiens] 31 3.3
gi|148536869 ninein isoform 2 [Homo sapiens] 31 3.3
gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithora... 31 4.4
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 30 5.7
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 30 5.7
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 30 5.7
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 30 5.7
gi|116284392 mucin 2 precursor [Homo sapiens] 30 5.7
gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens] 30 5.7
gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens] 30 5.7
gi|157671919 hypothetical protein LOC374864 isoform 1 [Homo sapi... 30 5.7
gi|157671917 hypothetical protein LOC374864 isoform 2 [Homo sapi... 30 5.7
gi|122937440 multiple EGF-like-domains 9 [Homo sapiens] 30 7.5
gi|31083243 gamma isoform of regulatory subunit B56, protein pho... 30 9.7
gi|240849359 gamma isoform of regulatory subunit B56, protein ph... 30 9.7
gi|240849353 gamma isoform of regulatory subunit B56, protein ph... 30 9.7
gi|31083236 gamma isoform of regulatory subunit B56, protein pho... 30 9.7
>gi|154350213 hypothetical protein LOC79591 [Homo sapiens]
Length = 689
Score = 1365 bits (3532), Expect = 0.0
Identities = 689/689 (100%), Positives = 689/689 (100%)
Query: 1 MAQVEKRGGLLRKSSASKKPLKEKVVLMYDEIFMTEDPSKCSPRFWEELFLMKVNLEYLE 60
MAQVEKRGGLLRKSSASKKPLKEKVVLMYDEIFMTEDPSKCSPRFWEELFLMKVNLEYLE
Sbjct: 1 MAQVEKRGGLLRKSSASKKPLKEKVVLMYDEIFMTEDPSKCSPRFWEELFLMKVNLEYLE 60
Query: 61 GKLESLDGEELMKIKDNINCLFQHCIQALGEEHPIRVVNALQTLCALIRGVHQKNKSTSG 120
GKLESLDGEELMKIKDNINCLFQHCIQALGEEHPIRVVNALQTLCALIRGVHQKNKSTSG
Sbjct: 61 GKLESLDGEELMKIKDNINCLFQHCIQALGEEHPIRVVNALQTLCALIRGVHQKNKSTSG 120
Query: 121 FDIINMLMGFDKAELCMKNLMESLDSLLCAEGSESLKSLCLKLLLCLVTVTDNISQNTIL 180
FDIINMLMGFDKAELCMKNLMESLDSLLCAEGSESLKSLCLKLLLCLVTVTDNISQNTIL
Sbjct: 121 FDIINMLMGFDKAELCMKNLMESLDSLLCAEGSESLKSLCLKLLLCLVTVTDNISQNTIL 180
Query: 181 EYVMINSIFEAILQILSHPPSRREHGYDAVVLLALLVNYRKYESVNPYIVKLSIVDDEAT 240
EYVMINSIFEAILQILSHPPSRREHGYDAVVLLALLVNYRKYESVNPYIVKLSIVDDEAT
Sbjct: 181 EYVMINSIFEAILQILSHPPSRREHGYDAVVLLALLVNYRKYESVNPYIVKLSIVDDEAT 240
Query: 241 LNGMGLVIAQALSEYNRQYKDKEEEHQSGFFSALTNMVGSMFIADAHEKISVQTNEAILL 300
LNGMGLVIAQALSEYNRQYKDKEEEHQSGFFSALTNMVGSMFIADAHEKISVQTNEAILL
Sbjct: 241 LNGMGLVIAQALSEYNRQYKDKEEEHQSGFFSALTNMVGSMFIADAHEKISVQTNEAILL 300
Query: 301 ALYEAVHLNRNFITVLAQSHPEMGLVTTPVSPAPTTPVTPLGTTPPSSDVISSVELPLDA 360
ALYEAVHLNRNFITVLAQSHPEMGLVTTPVSPAPTTPVTPLGTTPPSSDVISSVELPLDA
Sbjct: 301 ALYEAVHLNRNFITVLAQSHPEMGLVTTPVSPAPTTPVTPLGTTPPSSDVISSVELPLDA 360
Query: 361 DVQTSNLLITFLKYSSIVMQDTKDEHRLHSGKLCLIILTCIAEDQYANAFLHDDNMNFRV 420
DVQTSNLLITFLKYSSIVMQDTKDEHRLHSGKLCLIILTCIAEDQYANAFLHDDNMNFRV
Sbjct: 361 DVQTSNLLITFLKYSSIVMQDTKDEHRLHSGKLCLIILTCIAEDQYANAFLHDDNMNFRV 420
Query: 421 NLHRMPMRHRKKAADKNLPCRPLVCAVLDLMVEFIVTHMMKEFPMDLYIRCIQVVHKLLC 480
NLHRMPMRHRKKAADKNLPCRPLVCAVLDLMVEFIVTHMMKEFPMDLYIRCIQVVHKLLC
Sbjct: 421 NLHRMPMRHRKKAADKNLPCRPLVCAVLDLMVEFIVTHMMKEFPMDLYIRCIQVVHKLLC 480
Query: 481 YQKKCRVRLHYTWRELWSALINLLKFLMSNETVLLAKHNIFTLALMIVNLFNMFITYGDT 540
YQKKCRVRLHYTWRELWSALINLLKFLMSNETVLLAKHNIFTLALMIVNLFNMFITYGDT
Sbjct: 481 YQKKCRVRLHYTWRELWSALINLLKFLMSNETVLLAKHNIFTLALMIVNLFNMFITYGDT 540
Query: 541 FLPTPSSYDELYYEIIRMHQSFDNLYSMVLRLSTNAGQWKEAASKVTHALVNIRAIINHF 600
FLPTPSSYDELYYEIIRMHQSFDNLYSMVLRLSTNAGQWKEAASKVTHALVNIRAIINHF
Sbjct: 541 FLPTPSSYDELYYEIIRMHQSFDNLYSMVLRLSTNAGQWKEAASKVTHALVNIRAIINHF 600
Query: 601 NPKIESYAAVNHISQLSEEQVLEVVRANYDTLTLKLQDGLDQYERYSEQHKEAAFFKELV 660
NPKIESYAAVNHISQLSEEQVLEVVRANYDTLTLKLQDGLDQYERYSEQHKEAAFFKELV
Sbjct: 601 NPKIESYAAVNHISQLSEEQVLEVVRANYDTLTLKLQDGLDQYERYSEQHKEAAFFKELV 660
Query: 661 RSISTNVRRNLAFHTLSQEVLLKEFSTIS 689
RSISTNVRRNLAFHTLSQEVLLKEFSTIS
Sbjct: 661 RSISTNVRRNLAFHTLSQEVLLKEFSTIS 689
>gi|42476164 POU class 2 homeobox 1 [Homo sapiens]
Length = 743
Score = 35.8 bits (81), Expect = 0.14
Identities = 35/149 (23%), Positives = 56/149 (37%), Gaps = 7/149 (4%)
Query: 248 IAQALSEYNRQYKDKEEEHQSGFFSALTNMVGSMFIADAHEKISVQTNEAILLALYEAVH 307
IAQ L + + + Q TN+ + FI + Q + +L A
Sbjct: 172 IAQDLQQLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQ----TPQGQQGLLQAQNLLTQ 227
Query: 308 LNRNFITVLAQSHPEMGLVTTPVSPAPTTPVTPLGTTPPSSDVISSVELPL---DADVQT 364
L + L QS P + L + P +P T TP+ T P S ++ P +D++
Sbjct: 228 LPQQSQANLLQSQPSITLTSQPATPTRTIAATPIQTLPQSQSTPKRIDTPSLEEPSDLEE 287
Query: 365 SNLLITFLKYSSIVMQDTKDEHRLHSGKL 393
K I + T+ + L GKL
Sbjct: 288 LEQFAKTFKQRRIKLGFTQGDVGLAMGKL 316
>gi|209969838 transportin 2 (importin 3, karyopherin beta 2b)
isoform 1 [Homo sapiens]
Length = 897
Score = 34.7 bits (78), Expect = 0.30
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 131 DKAELCMKNL---MESLDSLLCAEGSESLKSLCLKLLLCLVTVTDNI--SQNTILEYVMI 185
D+A+ M N+ +E L +L + E K++C L++ L D + ++I++Y++
Sbjct: 202 DRAQALMDNIDTFIEHLFALAVDDDPEVRKNVCRALVMLLEVRIDRLIPHMHSIIQYMLQ 261
Query: 186 -------NSIFEAI---LQILSHPPSRREHGYDAVVLLALLVNYRKYESVNPYIVKLSIV 235
N EA L + P + V L+ +LVN KY ++ ++K +
Sbjct: 262 RTQDHDENVALEACEFWLTLAEQPICKEVLASHLVQLIPILVNGMKYSEIDIILLKGDVE 321
Query: 236 DDEA 239
+DEA
Sbjct: 322 EDEA 325
>gi|209969836 transportin 2 (importin 3, karyopherin beta 2b)
isoform 3 [Homo sapiens]
Length = 887
Score = 34.7 bits (78), Expect = 0.30
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 131 DKAELCMKNL---MESLDSLLCAEGSESLKSLCLKLLLCLVTVTDNI--SQNTILEYVMI 185
D+A+ M N+ +E L +L + E K++C L++ L D + ++I++Y++
Sbjct: 202 DRAQALMDNIDTFIEHLFALAVDDDPEVRKNVCRALVMLLEVRIDRLIPHMHSIIQYMLQ 261
Query: 186 -------NSIFEAI---LQILSHPPSRREHGYDAVVLLALLVNYRKYESVNPYIVKLSIV 235
N EA L + P + V L+ +LVN KY ++ ++K +
Sbjct: 262 RTQDHDENVALEACEFWLTLAEQPICKEVLASHLVQLIPILVNGMKYSEIDIILLKGDVE 321
Query: 236 DDEA 239
+DEA
Sbjct: 322 EDEA 325
>gi|48675813 transportin 2 (importin 3, karyopherin beta 2b) isoform
2 [Homo sapiens]
Length = 887
Score = 34.7 bits (78), Expect = 0.30
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 131 DKAELCMKNL---MESLDSLLCAEGSESLKSLCLKLLLCLVTVTDNI--SQNTILEYVMI 185
D+A+ M N+ +E L +L + E K++C L++ L D + ++I++Y++
Sbjct: 202 DRAQALMDNIDTFIEHLFALAVDDDPEVRKNVCRALVMLLEVRIDRLIPHMHSIIQYMLQ 261
Query: 186 -------NSIFEAI---LQILSHPPSRREHGYDAVVLLALLVNYRKYESVNPYIVKLSIV 235
N EA L + P + V L+ +LVN KY ++ ++K +
Sbjct: 262 RTQDHDENVALEACEFWLTLAEQPICKEVLASHLVQLIPILVNGMKYSEIDIILLKGDVE 321
Query: 236 DDEA 239
+DEA
Sbjct: 322 EDEA 325
>gi|4507379 TATA box binding protein [Homo sapiens]
Length = 339
Score = 33.1 bits (74), Expect = 0.88
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 10/59 (16%)
Query: 327 TTPVSPAPTTPVTPL----------GTTPPSSDVISSVELPLDADVQTSNLLITFLKYS 375
TTP+ P+P TP+TP+ G P +++S+V L D++T L +Y+
Sbjct: 135 TTPLYPSPMTPMTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYN 193
>gi|148664209 kelch-like 10 [Homo sapiens]
Length = 608
Score = 32.7 bits (73), Expect = 1.2
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 17/101 (16%)
Query: 121 FDIINMLMG---FDKAELCMKN---LMESLDSLLCAE-----------GSESLKSLCLKL 163
F+I+ ++ G F K+ELC+ N + + D C E E + + +
Sbjct: 119 FNIMGIVRGCCEFLKSELCLDNCIGICKFTDYYYCPELRQKAYMFILHNFEEMVKVSAEF 178
Query: 164 LLCLVTVTDNISQNTILEYVMINSIFEAILQILSHPPSRRE 204
L VT +I + L +++FEAIL+ +SH P R+
Sbjct: 179 LELSVTELKDIIEKDELNVKQEDAVFEAILKWISHDPQNRK 219
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 32.3 bits (72), Expect = 1.5
Identities = 16/32 (50%), Positives = 18/32 (56%)
Query: 314 TVLAQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
T A + P+ TTP PAPTTP P TTP
Sbjct: 291 TKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 322
Score = 32.3 bits (72), Expect = 1.5
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TTP PAPTTP P TTP
Sbjct: 302 APTTPKKPAPTTPKEPAPTTPKEPTPTTP 330
Score = 32.0 bits (71), Expect = 2.0
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TTP PAPTTP P TTP
Sbjct: 427 APTTPKEPAPTTPKKPAPTTPKEPAPTTP 455
Score = 32.0 bits (71), Expect = 2.0
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TTP PAPTTP P TTP
Sbjct: 539 APNTPKEPAPTTPKEPAPTTPKEPAPTTP 567
Score = 32.0 bits (71), Expect = 2.0
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TTP PAPTTP P TTP
Sbjct: 685 APTTPKETAPTTPKEPAPTTPKKPAPTTP 713
Score = 31.6 bits (70), Expect = 2.6
Identities = 16/30 (53%), Positives = 17/30 (56%)
Query: 316 LAQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
LA + PE TTP APTTP P TTP
Sbjct: 498 LAPTTPEKPAPTTPEELAPTTPEEPTPTTP 527
Score = 31.6 bits (70), Expect = 2.6
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTPPSS 348
A + PE TTP P PTTP P TTP ++
Sbjct: 507 APTTPEELAPTTPEEPTPTTPEEPAPTTPKAA 538
Score = 31.6 bits (70), Expect = 2.6
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TTP PAPTTP P TTP
Sbjct: 616 APTTPKGTAPTTPKEPAPTTPKEPAPTTP 644
Score = 31.6 bits (70), Expect = 2.6
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTPPSSDVISS 353
A + P+ TTP PAPTTP TP PP++ +S+
Sbjct: 693 APTTPKEPAPTTPKKPAPTTPETP----PPTTSEVST 725
Score = 31.2 bits (69), Expect = 3.3
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TP PAPTTP P TTP
Sbjct: 531 APTTPKAAAPNTPKEPAPTTPKEPAPTTP 559
Score = 30.8 bits (68), Expect = 4.4
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 326 VTTPVSPAPTTPVTPLGTTP--PSSDVISS 353
+TTP P PTTP P TTP P+ I S
Sbjct: 210 LTTPKEPTPTTPKEPASTTPKEPTPTTIKS 239
Score = 30.4 bits (67), Expect = 5.7
Identities = 15/30 (50%), Positives = 16/30 (53%)
Query: 316 LAQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
LA + PE TTP PAPTTP TP
Sbjct: 514 LAPTTPEEPTPTTPEEPAPTTPKAAAPNTP 543
Score = 30.0 bits (66), Expect = 7.5
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ T P PAPTTP P TTP
Sbjct: 341 APTTPKEPAPTAPKKPAPTTPKEPAPTTP 369
Score = 29.6 bits (65), Expect = 9.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTT 344
A + P+ TTP PAPTTP P TT
Sbjct: 349 APTAPKKPAPTTPKEPAPTTPKEPAPTT 376
Score = 29.6 bits (65), Expect = 9.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTT 344
A + P+ TTP PAPTTP P TT
Sbjct: 435 APTTPKKPAPTTPKEPAPTTPKEPAPTT 462
Score = 29.6 bits (65), Expect = 9.7
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Query: 317 AQSHPEMGLVTTPVSPAPTT-----PVTPLGTTP 345
A + P+ TTP PAPTT P TP GT P
Sbjct: 547 APTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAP 580
>gi|189181722 proteoglycan 4 isoform C [Homo sapiens]
Length = 1311
Score = 32.3 bits (72), Expect = 1.5
Identities = 16/32 (50%), Positives = 18/32 (56%)
Query: 314 TVLAQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
T A + P+ TTP PAPTTP P TTP
Sbjct: 332 TKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 363
Score = 32.3 bits (72), Expect = 1.5
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TTP PAPTTP P TTP
Sbjct: 343 APTTPKKPAPTTPKEPAPTTPKEPTPTTP 371
Score = 32.0 bits (71), Expect = 2.0
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TTP PAPTTP P TTP
Sbjct: 468 APTTPKEPAPTTPKKPAPTTPKEPAPTTP 496
Score = 32.0 bits (71), Expect = 2.0
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TTP PAPTTP P TTP
Sbjct: 580 APNTPKEPAPTTPKEPAPTTPKEPAPTTP 608
Score = 32.0 bits (71), Expect = 2.0
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TTP PAPTTP P TTP
Sbjct: 726 APTTPKETAPTTPKEPAPTTPKKPAPTTP 754
Score = 31.6 bits (70), Expect = 2.6
Identities = 16/30 (53%), Positives = 17/30 (56%)
Query: 316 LAQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
LA + PE TTP APTTP P TTP
Sbjct: 539 LAPTTPEKPAPTTPEELAPTTPEEPTPTTP 568
Score = 31.6 bits (70), Expect = 2.6
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTPPSS 348
A + PE TTP P PTTP P TTP ++
Sbjct: 548 APTTPEELAPTTPEEPTPTTPEEPAPTTPKAA 579
Score = 31.6 bits (70), Expect = 2.6
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TTP PAPTTP P TTP
Sbjct: 657 APTTPKGTAPTTPKEPAPTTPKEPAPTTP 685
Score = 31.6 bits (70), Expect = 2.6
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTPPSSDVISS 353
A + P+ TTP PAPTTP TP PP++ +S+
Sbjct: 734 APTTPKEPAPTTPKKPAPTTPETP----PPTTSEVST 766
Score = 31.2 bits (69), Expect = 3.3
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TP PAPTTP P TTP
Sbjct: 572 APTTPKAAAPNTPKEPAPTTPKEPAPTTP 600
Score = 30.8 bits (68), Expect = 4.4
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 326 VTTPVSPAPTTPVTPLGTTP--PSSDVISS 353
+TTP P PTTP P TTP P+ I S
Sbjct: 251 LTTPKEPTPTTPKEPASTTPKEPTPTTIKS 280
Score = 30.4 bits (67), Expect = 5.7
Identities = 15/30 (50%), Positives = 16/30 (53%)
Query: 316 LAQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
LA + PE TTP PAPTTP TP
Sbjct: 555 LAPTTPEEPTPTTPEEPAPTTPKAAAPNTP 584
Score = 30.0 bits (66), Expect = 7.5
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ T P PAPTTP P TTP
Sbjct: 382 APTTPKEPAPTAPKKPAPTTPKEPAPTTP 410
Score = 29.6 bits (65), Expect = 9.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTT 344
A + P+ TTP PAPTTP P TT
Sbjct: 390 APTAPKKPAPTTPKEPAPTTPKEPAPTT 417
Score = 29.6 bits (65), Expect = 9.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTT 344
A + P+ TTP PAPTTP P TT
Sbjct: 476 APTTPKKPAPTTPKEPAPTTPKEPAPTT 503
Score = 29.6 bits (65), Expect = 9.7
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Query: 317 AQSHPEMGLVTTPVSPAPTT-----PVTPLGTTP 345
A + P+ TTP PAPTT P TP GT P
Sbjct: 588 APTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAP 621
>gi|189181720 proteoglycan 4 isoform B [Homo sapiens]
Length = 1363
Score = 32.3 bits (72), Expect = 1.5
Identities = 16/32 (50%), Positives = 18/32 (56%)
Query: 314 TVLAQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
T A + P+ TTP PAPTTP P TTP
Sbjct: 384 TKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 415
Score = 32.3 bits (72), Expect = 1.5
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TTP PAPTTP P TTP
Sbjct: 395 APTTPKKPAPTTPKEPAPTTPKEPTPTTP 423
Score = 32.0 bits (71), Expect = 2.0
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TTP PAPTTP P TTP
Sbjct: 520 APTTPKEPAPTTPKKPAPTTPKEPAPTTP 548
Score = 32.0 bits (71), Expect = 2.0
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TTP PAPTTP P TTP
Sbjct: 632 APNTPKEPAPTTPKEPAPTTPKEPAPTTP 660
Score = 32.0 bits (71), Expect = 2.0
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TTP PAPTTP P TTP
Sbjct: 778 APTTPKETAPTTPKEPAPTTPKKPAPTTP 806
Score = 31.6 bits (70), Expect = 2.6
Identities = 16/30 (53%), Positives = 17/30 (56%)
Query: 316 LAQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
LA + PE TTP APTTP P TTP
Sbjct: 591 LAPTTPEKPAPTTPEELAPTTPEEPTPTTP 620
Score = 31.6 bits (70), Expect = 2.6
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTPPSS 348
A + PE TTP P PTTP P TTP ++
Sbjct: 600 APTTPEELAPTTPEEPTPTTPEEPAPTTPKAA 631
Score = 31.6 bits (70), Expect = 2.6
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TTP PAPTTP P TTP
Sbjct: 709 APTTPKGTAPTTPKEPAPTTPKEPAPTTP 737
Score = 31.6 bits (70), Expect = 2.6
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTPPSSDVISS 353
A + P+ TTP PAPTTP TP PP++ +S+
Sbjct: 786 APTTPKEPAPTTPKKPAPTTPETP----PPTTSEVST 818
Score = 31.2 bits (69), Expect = 3.3
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TP PAPTTP P TTP
Sbjct: 624 APTTPKAAAPNTPKEPAPTTPKEPAPTTP 652
Score = 30.8 bits (68), Expect = 4.4
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 326 VTTPVSPAPTTPVTPLGTTP--PSSDVISS 353
+TTP P PTTP P TTP P+ I S
Sbjct: 303 LTTPKEPTPTTPKEPASTTPKEPTPTTIKS 332
Score = 30.4 bits (67), Expect = 5.7
Identities = 15/30 (50%), Positives = 16/30 (53%)
Query: 316 LAQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
LA + PE TTP PAPTTP TP
Sbjct: 607 LAPTTPEEPTPTTPEEPAPTTPKAAAPNTP 636
Score = 30.0 bits (66), Expect = 7.5
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ T P PAPTTP P TTP
Sbjct: 434 APTTPKEPAPTAPKKPAPTTPKEPAPTTP 462
Score = 29.6 bits (65), Expect = 9.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTT 344
A + P+ TTP PAPTTP P TT
Sbjct: 442 APTAPKKPAPTTPKEPAPTTPKEPAPTT 469
Score = 29.6 bits (65), Expect = 9.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTT 344
A + P+ TTP PAPTTP P TT
Sbjct: 528 APTTPKKPAPTTPKEPAPTTPKEPAPTT 555
Score = 29.6 bits (65), Expect = 9.7
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Query: 317 AQSHPEMGLVTTPVSPAPTT-----PVTPLGTTP 345
A + P+ TTP PAPTT P TP GT P
Sbjct: 640 APTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAP 673
>gi|67190163 proteoglycan 4 isoform A [Homo sapiens]
Length = 1404
Score = 32.3 bits (72), Expect = 1.5
Identities = 16/32 (50%), Positives = 18/32 (56%)
Query: 314 TVLAQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
T A + P+ TTP PAPTTP P TTP
Sbjct: 425 TKSAPTTPKEPAPTTPKKPAPTTPKEPAPTTP 456
Score = 32.3 bits (72), Expect = 1.5
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TTP PAPTTP P TTP
Sbjct: 436 APTTPKKPAPTTPKEPAPTTPKEPTPTTP 464
Score = 32.0 bits (71), Expect = 2.0
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TTP PAPTTP P TTP
Sbjct: 561 APTTPKEPAPTTPKKPAPTTPKEPAPTTP 589
Score = 32.0 bits (71), Expect = 2.0
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TTP PAPTTP P TTP
Sbjct: 673 APNTPKEPAPTTPKEPAPTTPKEPAPTTP 701
Score = 32.0 bits (71), Expect = 2.0
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TTP PAPTTP P TTP
Sbjct: 819 APTTPKETAPTTPKEPAPTTPKKPAPTTP 847
Score = 31.6 bits (70), Expect = 2.6
Identities = 16/30 (53%), Positives = 17/30 (56%)
Query: 316 LAQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
LA + PE TTP APTTP P TTP
Sbjct: 632 LAPTTPEKPAPTTPEELAPTTPEEPTPTTP 661
Score = 31.6 bits (70), Expect = 2.6
Identities = 15/32 (46%), Positives = 18/32 (56%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTPPSS 348
A + PE TTP P PTTP P TTP ++
Sbjct: 641 APTTPEELAPTTPEEPTPTTPEEPAPTTPKAA 672
Score = 31.6 bits (70), Expect = 2.6
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TTP PAPTTP P TTP
Sbjct: 750 APTTPKGTAPTTPKEPAPTTPKEPAPTTP 778
Score = 31.6 bits (70), Expect = 2.6
Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTPPSSDVISS 353
A + P+ TTP PAPTTP TP PP++ +S+
Sbjct: 827 APTTPKEPAPTTPKKPAPTTPETP----PPTTSEVST 859
Score = 31.2 bits (69), Expect = 3.3
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ TP PAPTTP P TTP
Sbjct: 665 APTTPKAAAPNTPKEPAPTTPKEPAPTTP 693
Score = 30.8 bits (68), Expect = 4.4
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 326 VTTPVSPAPTTPVTPLGTTP--PSSDVISS 353
+TTP P PTTP P TTP P+ I S
Sbjct: 344 LTTPKEPTPTTPKEPASTTPKEPTPTTIKS 373
Score = 30.4 bits (67), Expect = 5.7
Identities = 15/30 (50%), Positives = 16/30 (53%)
Query: 316 LAQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
LA + PE TTP PAPTTP TP
Sbjct: 648 LAPTTPEEPTPTTPEEPAPTTPKAAAPNTP 677
Score = 30.0 bits (66), Expect = 7.5
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTTP 345
A + P+ T P PAPTTP P TTP
Sbjct: 475 APTTPKEPAPTAPKKPAPTTPKEPAPTTP 503
Score = 29.6 bits (65), Expect = 9.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTT 344
A + P+ TTP PAPTTP P TT
Sbjct: 483 APTAPKKPAPTTPKEPAPTTPKEPAPTT 510
Score = 29.6 bits (65), Expect = 9.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 317 AQSHPEMGLVTTPVSPAPTTPVTPLGTT 344
A + P+ TTP PAPTTP P TT
Sbjct: 569 APTTPKKPAPTTPKEPAPTTPKEPAPTT 596
Score = 29.6 bits (65), Expect = 9.7
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
Query: 317 AQSHPEMGLVTTPVSPAPTT-----PVTPLGTTP 345
A + P+ TTP PAPTT P TP GT P
Sbjct: 681 APTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAP 714
>gi|41281612 zinc finger protein 828 [Homo sapiens]
Length = 812
Score = 32.3 bits (72), Expect = 1.5
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 313 ITVLAQSHPEMGLVTTPVSPAPTTPVTPLGTTPPSSDVISSVELPL 358
I L+ ++G V +P SP PT P+TPL P S V ++ PL
Sbjct: 127 IPALSMETQKLGSVLSPESPKPT-PLTPLEPQKPGSVVSPELQTPL 171
>gi|33946321 ninein isoform 5 [Homo sapiens]
Length = 2090
Score = 31.2 bits (69), Expect = 3.3
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 131 DKAELCMKNLMESLDSLLCAE-GSESLKSLCLKLLLCLVT--VTDNISQNTILEYVMINS 187
D+ E +K L +S D+ G E L LC L L V + + Q+ +L V +
Sbjct: 7 DQHEARLKELFDSFDTTGTGSLGQEELTDLCHMLSLEEVAPVLQQTLLQDNLLGRVHFDQ 66
Query: 188 IFEAILQILSHPPSRREH 205
EA++ ILS S EH
Sbjct: 67 FKEALILILSRTLSNEEH 84
>gi|148536871 ninein isoform 1 [Homo sapiens]
Length = 2046
Score = 31.2 bits (69), Expect = 3.3
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 131 DKAELCMKNLMESLDSLLCAE-GSESLKSLCLKLLLCLVT--VTDNISQNTILEYVMINS 187
D+ E +K L +S D+ G E L LC L L V + + Q+ +L V +
Sbjct: 7 DQHEARLKELFDSFDTTGTGSLGQEELTDLCHMLSLEEVAPVLQQTLLQDNLLGRVHFDQ 66
Query: 188 IFEAILQILSHPPSRREH 205
EA++ ILS S EH
Sbjct: 67 FKEALILILSRTLSNEEH 84
>gi|148536869 ninein isoform 2 [Homo sapiens]
Length = 2133
Score = 31.2 bits (69), Expect = 3.3
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 131 DKAELCMKNLMESLDSLLCAE-GSESLKSLCLKLLLCLVT--VTDNISQNTILEYVMINS 187
D+ E +K L +S D+ G E L LC L L V + + Q+ +L V +
Sbjct: 7 DQHEARLKELFDSFDTTGTGSLGQEELTDLCHMLSLEEVAPVLQQTLLQDNLLGRVHFDQ 66
Query: 188 IFEAILQILSHPPSRREH 205
EA++ ILS S EH
Sbjct: 67 FKEALILILSRTLSNEEH 84
>gi|57222568 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 6 [Homo sapiens]
Length = 1093
Score = 30.8 bits (68), Expect = 4.4
Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 4/128 (3%)
Query: 227 PYIVKLSIVDDEATLNGMGLVIAQALSEYNRQYKDKEEEHQS----GFFSALTNMVGSMF 282
P + V A+ + Q SE +R+ K K+ S G + V S
Sbjct: 266 PVVPTADKVSSSASSSSHHEASTQETSESSRESKGKKSSSHSLSHKGKKLSSGKGVSSFT 325
Query: 283 IADAHEKISVQTNEAILLALYEAVHLNRNFITVLAQSHPEMGLVTTPVSPAPTTPVTPLG 342
A + S ++ ++ + +F PE + P +PAP+ P +P
Sbjct: 326 SASSSSSSSSSSSGGPFQPAVSSLQSSPDFSAFPKLEQPEEDKYSKPTAPAPSAPPSPSA 385
Query: 343 TTPPSSDV 350
PP +D+
Sbjct: 386 PEPPKADL 393
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 30.4 bits (67), Expect = 5.7
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 313 ITVLAQSHPEMGLVTTP-VSPAPTTPVTPLGTTPPSSDVISS 353
+TV A +HP GL TP +P P P+ P +PPS + +S
Sbjct: 443 VTVTALAHPPSGLHPTPSTAPGPHVPLMP--PSPPSQVIPAS 482
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 30.4 bits (67), Expect = 5.7
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 313 ITVLAQSHPEMGLVTTP-VSPAPTTPVTPLGTTPPSSDVISS 353
+TV A +HP GL TP +P P P+ P +PPS + +S
Sbjct: 443 VTVTALAHPPSGLHPTPSTAPGPHVPLMP--PSPPSQVIPAS 482
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 30.4 bits (67), Expect = 5.7
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 313 ITVLAQSHPEMGLVTTP-VSPAPTTPVTPLGTTPPSSDVISS 353
+TV A +HP GL TP +P P P+ P +PPS + +S
Sbjct: 443 VTVTALAHPPSGLHPTPSTAPGPHVPLMP--PSPPSQVIPAS 482
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 30.4 bits (67), Expect = 5.7
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 313 ITVLAQSHPEMGLVTTP-VSPAPTTPVTPLGTTPPSSDVISS 353
+TV A +HP GL TP +P P P+ P +PPS + +S
Sbjct: 443 VTVTALAHPPSGLHPTPSTAPGPHVPLMP--PSPPSQVIPAS 482
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 30.4 bits (67), Expect = 5.7
Identities = 15/31 (48%), Positives = 16/31 (51%)
Query: 327 TTPVSPAPTTPVTPLGTTPPSSDVISSVELP 357
TT SP PTT TP TT PS + LP
Sbjct: 1718 TTTPSPPPTTMTTPSPTTTPSPPTTTMTTLP 1748
>gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]
Length = 1812
Score = 30.4 bits (67), Expect = 5.7
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 328 TPVSPAPTTPVTPLGTTPPSSDVISSVELPLDAD 361
+P P P P TP G PP D V LP+ D
Sbjct: 173 SPPRPQPRGPRTPPGPPPPDDDEDDPVPLPVSGD 206
>gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens]
Length = 1147
Score = 30.4 bits (67), Expect = 5.7
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 328 TPVSPAPTTPVTPLGTTPPSSDVISSVELPLDAD 361
+P P P P TP G PP D V LP+ D
Sbjct: 173 SPPRPQPRGPRTPPGPPPPDDDEDDPVPLPVSGD 206
>gi|157671919 hypothetical protein LOC374864 isoform 1 [Homo
sapiens]
Length = 867
Score = 30.4 bits (67), Expect = 5.7
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 18/90 (20%)
Query: 554 EIIRMHQSFDNLYSMVLRLSTNAGQWKEAASKVTHALVNIRAIINHFNPKIESYAAVNHI 613
EI +++ FD+ S V+ ++TN +E +VT A+ E+ ++ N +
Sbjct: 343 EIYQLNSLFDHYSSSVINVNTNI---EEKEEEVTEAI-------------RETKSSKNEL 386
Query: 614 SQLSEEQVLEVVRANYDTLTLKLQDGLDQY 643
LS ++LE +R YD LT K + +QY
Sbjct: 387 HSLS--KMLEDLRRVYDQLTWKQKSHENQY 414
>gi|157671917 hypothetical protein LOC374864 isoform 2 [Homo
sapiens]
Length = 829
Score = 30.4 bits (67), Expect = 5.7
Identities = 26/90 (28%), Positives = 45/90 (50%), Gaps = 18/90 (20%)
Query: 554 EIIRMHQSFDNLYSMVLRLSTNAGQWKEAASKVTHALVNIRAIINHFNPKIESYAAVNHI 613
EI +++ FD+ S V+ ++TN +E +VT A+ E+ ++ N +
Sbjct: 343 EIYQLNSLFDHYSSSVINVNTNI---EEKEEEVTEAI-------------RETKSSKNEL 386
Query: 614 SQLSEEQVLEVVRANYDTLTLKLQDGLDQY 643
LS ++LE +R YD LT K + +QY
Sbjct: 387 HSLS--KMLEDLRRVYDQLTWKQKSHENQY 414
>gi|122937440 multiple EGF-like-domains 9 [Homo sapiens]
Length = 639
Score = 30.0 bits (66), Expect = 7.5
Identities = 20/49 (40%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 310 RNFITVLAQSHPEMGLVTTPVSPAPTTPV---TPLGTTP--PSSDVISS 353
R T A + P ++T PAPTTPV P TTP P+ D+ SS
Sbjct: 124 RTSTTSQAPTRPAPTTLSTTTGPAPTTPVATTVPAPTTPRTPTPDLPSS 172
>gi|31083243 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform c [Homo sapiens]
Length = 449
Score = 29.6 bits (65), Expect = 9.7
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 14/118 (11%)
Query: 17 SKKPLKEKVVLMYDEIFMTEDPSKCSPRFWEELFLMKVNLEYLEGKLESLDGEELMKIKD 76
+KK + +K VL E+F +EDP E +K L + GK L I+
Sbjct: 155 AKKYIDQKFVLQLLELFDSEDP--------RERDFLKTTLHRIYGKFLGLRA----YIRK 202
Query: 77 NINCLFQHCIQALGEEHPIRVVNALQTLCALIRGVHQKNKSTSGFDIINMLMGFDKAE 134
IN +F I EH + L+ L ++I G K ++ +L+ K +
Sbjct: 203 QINNIFYRFIYE--TEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVK 258
>gi|240849359 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform f [Homo sapiens]
Length = 540
Score = 29.6 bits (65), Expect = 9.7
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 14/118 (11%)
Query: 17 SKKPLKEKVVLMYDEIFMTEDPSKCSPRFWEELFLMKVNLEYLEGKLESLDGEELMKIKD 76
+KK + +K VL E+F +EDP E +K L + GK L I+
Sbjct: 210 AKKYIDQKFVLQLLELFDSEDP--------RERDFLKTTLHRIYGKFLGLRA----YIRK 257
Query: 77 NINCLFQHCIQALGEEHPIRVVNALQTLCALIRGVHQKNKSTSGFDIINMLMGFDKAE 134
IN +F I EH + L+ L ++I G K ++ +L+ K +
Sbjct: 258 QINNIFYRFIYE--TEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVK 313
>gi|240849353 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform e [Homo sapiens]
Length = 555
Score = 29.6 bits (65), Expect = 9.7
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 14/118 (11%)
Query: 17 SKKPLKEKVVLMYDEIFMTEDPSKCSPRFWEELFLMKVNLEYLEGKLESLDGEELMKIKD 76
+KK + +K VL E+F +EDP E +K L + GK L I+
Sbjct: 186 AKKYIDQKFVLQLLELFDSEDP--------RERDFLKTTLHRIYGKFLGLRA----YIRK 233
Query: 77 NINCLFQHCIQALGEEHPIRVVNALQTLCALIRGVHQKNKSTSGFDIINMLMGFDKAE 134
IN +F I EH + L+ L ++I G K ++ +L+ K +
Sbjct: 234 QINNIFYRFIYE--TEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVK 289
>gi|31083236 gamma isoform of regulatory subunit B56, protein
phosphatase 2A isoform b [Homo sapiens]
Length = 485
Score = 29.6 bits (65), Expect = 9.7
Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 14/118 (11%)
Query: 17 SKKPLKEKVVLMYDEIFMTEDPSKCSPRFWEELFLMKVNLEYLEGKLESLDGEELMKIKD 76
+KK + +K VL E+F +EDP E +K L + GK L I+
Sbjct: 155 AKKYIDQKFVLQLLELFDSEDP--------RERDFLKTTLHRIYGKFLGLRA----YIRK 202
Query: 77 NINCLFQHCIQALGEEHPIRVVNALQTLCALIRGVHQKNKSTSGFDIINMLMGFDKAE 134
IN +F I EH + L+ L ++I G K ++ +L+ K +
Sbjct: 203 QINNIFYRFIYE--TEHHNGIAELLEILGSIINGFALPLKEEHKIFLLKVLLPLHKVK 258
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.135 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,891,031
Number of Sequences: 37866
Number of extensions: 1016268
Number of successful extensions: 4204
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 3679
Number of HSP's gapped (non-prelim): 513
length of query: 689
length of database: 18,247,518
effective HSP length: 109
effective length of query: 580
effective length of database: 14,120,124
effective search space: 8189671920
effective search space used: 8189671920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.