Guide to the Human Genome
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Name: PPP2R5C Sequence: fasta or formatted (540aa) NCBI GI: 240849359
Description:

gamma isoform of regulatory subunit B56, protein phosphatase 2A isoform f

Referenced in:

Serine / Threonine Protein Phosphatases

Other entries for this name:
alt prot [555aa] gamma isoform of regulatory subunit B56, protein phosphatase 2A i...
alt prot [485aa] gamma isoform of regulatory subunit B56, protein phosphatase 2A i...
alt prot [449aa] gamma isoform of regulatory subunit B56, protein phosphatase 2A i...
alt prot [524aa] gamma isoform of regulatory subunit B56, protein phosphatase 2A i...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         33           2
 C cysteine            1.1          6           2
 D aspartate           4.4         24           2
 E glutamate           9.1         49           2
 F phenylalanine       5.2         28           2
 G glycine             2.0         11           1
 H histidine           2.8         15           2
 I isoleucine          5.4         29           2
 K lysine             10.6         57           2
 L leucine            11.1         60           2
 M methionine          2.2         12           1
 N asparagine          4.6         25           2
 P proline             6.7         36           2
 Q glutamine           4.4         24           2
 R arginine            4.4         24           2
 S serine              6.7         36           2
 T threonine           3.1         17           2
 V valine              5.9         32           2
 W tryptophan          1.1          6           1
 Y tyrosine            3.0         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma isoform of regulatory subunit B56, protein ph... 
PPP2R5C               0.876   gamma isoform of regulatory subunit B56, protein ph...
PPP2R5C               0.850   gamma isoform of regulatory subunit B56, protein pho...
PPP2R5C               0.831   gamma isoform of regulatory subunit B56, protein pho...
PPP2R5C               0.768   gamma isoform of regulatory subunit B56, protein pho...
PPP2R5D               0.767   delta isoform of regulatory subunit B56, protein phos...
PPP2R5D               0.721   delta isoform of regulatory subunit B56, protein pho...
PPP2R5D               0.708   delta isoform of regulatory subunit B56, protein pho...
PPP2R5E               0.567   epsilon isoform of regulatory subunit B56, protein ph...
PPP2R5A               0.565   protein phosphatase 2, regulatory subunit B (B56), al...
PPP2R5B               0.549   beta isoform of regulatory subunit B56, protein phosp...
CHD7                  0.010   chromodomain helicase DNA binding protein 7 
PPP1R10               0.008   protein phosphatase 1, regulatory subunit 10 
PEX3                  0.008   peroxisomal biogenesis factor 3 
BOD1L                 0.008   biorientation of chromosomes in cell division 1-like...
CHD8                  0.007   chromodomain helicase DNA binding protein 8 
STAU2                 0.007   staufen homolog 2 
TCHH                  0.007   trichohyalin 
BAZ2A                 0.007   bromodomain adjacent to zinc finger domain, 2A [Homo...
SHOC2                 0.007   soc-2 suppressor of clear homolog 
CCDC120               0.007   coiled-coil domain containing 120 isoform 4 
CCDC120               0.007   coiled-coil domain containing 120 isoform 2 
PKN2                  0.007   protein kinase N2 
ATRX                  0.007   transcriptional regulator ATRX isoform 2 
ATRX                  0.007   transcriptional regulator ATRX isoform 1 
RBBP6                 0.007   retinoblastoma-binding protein 6 isoform 2 
RBBP6                 0.007   retinoblastoma-binding protein 6 isoform 1 
C6orf103              0.007   hypothetical protein LOC79747 
WDR91                 0.006   WD repeat domain 91 
AFF3                  0.006   AF4/FMR2 family, member 3 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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