Guide to the Human Genome
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Name: SLC17A8 Sequence: fasta or formatted (589aa) NCBI GI: 21322234
Description:

solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 8 isoform 1

Referenced in:

Glutamate
Solute Carrier Families

Other entries for this name:
alt prot [539aa] solute carrier family 17 (sodium-dependent inorganic phosphate co...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         44           2
 C cysteine            2.7         16           2
 D aspartate           2.2         13           1
 E glutamate           6.8         40           3
 F phenylalanine       6.1         36           2
 G glycine             9.2         54           2
 H histidine           1.9         11           1
 I isoleucine          7.6         45           2
 K lysine              4.4         26           3
 L leucine             7.6         45           3
 M methionine          3.1         18           1
 N asparagine          3.9         23           2
 P proline             4.4         26           2
 Q glutamine           3.1         18           1
 R arginine            3.4         20           1
 S serine              7.5         44           2
 T threonine           5.4         32           3
 V valine              7.6         45           2
 W tryptophan          2.0         12           1
 Y tyrosine            3.6         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 17 (sodium-dependent inorganic... 
SLC17A8               0.893   solute carrier family 17 (sodium-dependent inorgani...
SLC17A6               0.722   solute carrier family 17 (sodium-dependent inorganic ...
SLC17A7               0.698   solute carrier family 17, member 7 
SLC17A5               0.289   sialin 
SLC17A4               0.203   solute carrier family 17 (sodium phosphate), member 4...
SLC17A1               0.186   solute carrier family 17 (sodium phosphate), member...
SLC17A3               0.181   solute carrier family 17 (sodium phosphate), member...
SLC17A3               0.141   solute carrier family 17 (sodium phosphate), member...
SLC17A2               0.138   solute carrier family 17 (sodium phosphate), member 2...
SLC17A9               0.116   vesicular nucleotide transporter SLC17A9 
SLC37A4               0.021   solute carrier family 37 (glucose-6-phosphate transpo...
WDR65                 0.006   WD repeat domain 65 
ABCC12                0.006   ATP-binding cassette protein C12 
SYCP2L                0.006   synaptonemal complex protein 2-like 
MFSD6                 0.005   major facilitator superfamily domain containing 6 [...
SV2C                  0.005   synaptic vesicle glycoprotein 2C 
MFSD1                 0.005   major facilitator superfamily domain containing 1 [H...
SVOPL                 0.004   SVOP-like isoform 1 
ZFHX4                 0.004   zinc finger homeodomain 4 
TMEM20                0.004   transmembrane protein 20 isoform 1 
TMEM20                0.004   transmembrane protein 20 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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