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Search of human proteins with 153792575
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|153792575 hypothetical protein LOC90120 [Homo sapiens]
(135 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|153792575 hypothetical protein LOC90120 [Homo sapiens] 305 1e-83
gi|225690551 keratin associated protein 4-9 [Homo sapiens] 47 5e-06
gi|13994129 keratin associated protein 4-12 [Homo sapiens] 46 8e-06
gi|239751308 PREDICTED: keratin associated protein 4-9 isoform 1... 45 1e-05
gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens] 45 1e-05
gi|239751310 PREDICTED: keratin associated protein 4-9 isoform 2... 45 2e-05
gi|239755326 PREDICTED: hypothetical protein [Homo sapiens] 43 7e-05
gi|18079216 CASK interacting protein 1 [Homo sapiens] 42 1e-04
gi|13994236 cat eye syndrome chromosome region, candidate 6 isof... 42 2e-04
gi|225690558 keratin associated protein 4-7 [Homo sapiens] 42 2e-04
gi|239745805 PREDICTED: keratin associated protein 4.8 [Homo sap... 42 2e-04
gi|239745803 PREDICTED: keratin associated protein 4-7 [Homo sap... 42 2e-04
gi|225690554 keratin associated protein 4.8 [Homo sapiens] 42 2e-04
gi|239758034 PREDICTED: keratin associated protein 4-8 isoform 3... 42 2e-04
gi|239758032 PREDICTED: keratin associated protein 4-8 isoform 2... 42 2e-04
gi|239758030 PREDICTED: keratin associated protein 4-8 isoform 1... 42 2e-04
gi|239756798 PREDICTED: similar to keratin associated protein 4-... 42 2e-04
gi|239756796 PREDICTED: similar to keratin associated protein 4-... 42 2e-04
gi|239756794 PREDICTED: similar to keratin associated protein 4-... 42 2e-04
gi|239751306 PREDICTED: keratin associated protein 4-8 [Homo sap... 41 3e-04
gi|13376335 hypothetical protein LOC79946 [Homo sapiens] 40 4e-04
gi|239744133 PREDICTED: hypothetical protein [Homo sapiens] 40 6e-04
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s... 40 6e-04
gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo ... 40 6e-04
gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo ... 40 6e-04
gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo s... 40 6e-04
gi|123702038 keratin associated protein 5-9 [Homo sapiens] 40 6e-04
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 40 7e-04
gi|154426272 hypothetical protein LOC54540 [Homo sapiens] 40 7e-04
gi|154146260 keratin associated protein 4-3 [Homo sapiens] 40 7e-04
>gi|153792575 hypothetical protein LOC90120 [Homo sapiens]
Length = 135
Score = 305 bits (780), Expect = 1e-83
Identities = 135/135 (100%), Positives = 135/135 (100%)
Query: 1 MTPTPTAAWTPPPPLRPSAAAAGAQCRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPA 60
MTPTPTAAWTPPPPLRPSAAAAGAQCRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPA
Sbjct: 1 MTPTPTAAWTPPPPLRPSAAAAGAQCRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPA 60
Query: 61 PSTTTSTCTSRRAGCTASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCR 120
PSTTTSTCTSRRAGCTASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCR
Sbjct: 61 PSTTTSTCTSRRAGCTASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCR 120
Query: 121 CCCCCWAAGAWTSAW 135
CCCCCWAAGAWTSAW
Sbjct: 121 CCCCCWAAGAWTSAW 135
>gi|225690551 keratin associated protein 4-9 [Homo sapiens]
Length = 210
Score = 47.0 bits (110), Expect = 5e-06
Identities = 40/120 (33%), Positives = 51/120 (42%), Gaps = 13/120 (10%)
Query: 12 PPPLRPSAAAAGAQCRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTSR 71
P RPS CR+ +R C S+ P C +PA C PT PS +TC
Sbjct: 62 PTCSRPSCCQTTC-CRTTCYRPSCCVSSCCRPQCC-QPA--CCQPTCCRPSCCETTCCHP 117
Query: 72 RAGCTASSASYSTLAAAC---SLRRSGVRWP----PSSAYSTWAFASCCASSASCRCCCC 124
R C +S S ++C +S P PS + S+ SCC SS CR CCC
Sbjct: 118 RC-CISSCCRPSCCVSSCCKPQCCQSVCCQPNCCRPSCSISSCCRPSCCESSC-CRPCCC 175
>gi|13994129 keratin associated protein 4-12 [Homo sapiens]
Length = 201
Score = 46.2 bits (108), Expect = 8e-06
Identities = 37/116 (31%), Positives = 44/116 (37%), Gaps = 10/116 (8%)
Query: 12 PPPLRPSAAAAGAQCRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTC--- 68
P RPS CR+ R C S+ P C C PT PS +TC
Sbjct: 58 PTCCRPSCCQTTC-CRTTCCRPSCCVSSCCRPQCCQ---SVCCQPTCCRPSCCQTTCCRT 113
Query: 69 TSRRAGCTASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCCCC 124
T R C SS + + + R PS S+ SCC SS CR CCC
Sbjct: 114 TCCRPSCCVSSCCRPQCCQSVCCQPTCCR--PSCCISSSCCPSCCESSC-CRPCCC 166
Score = 28.1 bits (61), Expect = 2.3
Identities = 19/65 (29%), Positives = 22/65 (33%), Gaps = 10/65 (15%)
Query: 12 PPPLRPSAAAAGAQCRSCPFRGGCAPSTARTP--------PACMRPAGPCAPPTWPAPST 63
P RPS + + C SC C P P C RP C T P P
Sbjct: 138 PTCCRPSCCISSSCCPSCCESSCCRPCCCLRPVCGRVSCHTTCYRPT--CVISTCPRPLC 195
Query: 64 TTSTC 68
S+C
Sbjct: 196 CASSC 200
>gi|239751308 PREDICTED: keratin associated protein 4-9 isoform 1
[Homo sapiens]
Length = 210
Score = 45.4 bits (106), Expect = 1e-05
Identities = 39/120 (32%), Positives = 50/120 (41%), Gaps = 13/120 (10%)
Query: 12 PPPLRPSAAAAGAQCRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTSR 71
P RPS CR+ +R C S+ P C +P C PT PS +TC
Sbjct: 62 PTCSRPSCCQTTC-CRTTCYRPSCCVSSCCRPQCC-QPV--CCQPTCCRPSCCETTCCHP 117
Query: 72 RAGCTASSASYSTLAAAC---SLRRSGVRWP----PSSAYSTWAFASCCASSASCRCCCC 124
R C +S S ++C +S P PS + S+ SCC SS CR CCC
Sbjct: 118 RC-CISSCCRPSCCVSSCCKPQCCQSVCCQPNCCRPSCSISSCCRPSCCESSC-CRPCCC 175
>gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]
Length = 1603
Score = 45.4 bits (106), Expect = 1e-05
Identities = 31/110 (28%), Positives = 47/110 (42%), Gaps = 9/110 (8%)
Query: 6 TAAWTPPPP----LRPSAAAAGAQCRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAP 61
+A + PPP L PS A+ + PF G +A TP C A +P + P
Sbjct: 1017 SAGYAPPPTGGPCLPPSKASFFSSSEGAPFSG-----SAPTPLRCDSRASTVSPGGYMVP 1071
Query: 62 STTTSTCTSRRAGCTASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFAS 111
TT++ TS + ++SS+S+ C +WP Y +AS
Sbjct: 1072 KGTTASATSAASAASSSSSSFQPSPENCRQFAGASQWPFRQGYGGLDWAS 1121
>gi|239751310 PREDICTED: keratin associated protein 4-9 isoform 2
[Homo sapiens]
Length = 195
Score = 44.7 bits (104), Expect = 2e-05
Identities = 35/106 (33%), Positives = 46/106 (43%), Gaps = 12/106 (11%)
Query: 26 CRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTSRRAGCTASSASYSTL 85
CR+ +R C S+ P C +P C PT PS +TC R C +S S
Sbjct: 60 CRTTCYRPSCCVSSCCRPQCC-QPV--CCQPTCCRPSCCETTCCHPRC-CISSCCRPSCC 115
Query: 86 AAAC---SLRRSGVRWP----PSSAYSTWAFASCCASSASCRCCCC 124
++C +S P PS + S+ SCC SS CR CCC
Sbjct: 116 VSSCCKPQCCQSVCCQPNCCRPSCSISSCCRPSCCESSC-CRPCCC 160
>gi|239755326 PREDICTED: hypothetical protein [Homo sapiens]
Length = 375
Score = 43.1 bits (100), Expect = 7e-05
Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 12/115 (10%)
Query: 19 AAAAGAQCRSCPFRGGCAPSTARTPPACM-RPAGPCAPPTWPAPSTTTSTCTSRRAGCTA 77
A+++ C+S C+ +++T C + +G + S T+STC+ + +G ++
Sbjct: 13 ASSSSCSCQSSQTSSTCSCQSSQTSSTCSCQSSGTSSTSCNWQSSRTSSTCSCQSSGTSS 72
Query: 78 SSASY--STLAAACSLRRSGVRWPPSSAYSTWAFA-----SCCASSASCRCCCCC 125
+S S S ++ CS + SG SS +W F+ CC SS + C C
Sbjct: 73 TSCSCQSSETSSTCSCQSSGT----SSTSCSWQFSRTSSTCCCQSSRTSSTSCSC 123
Score = 40.0 bits (92), Expect = 6e-04
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Query: 18 SAAAAGAQCRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPST-TTSTCTSRRAGCT 76
S ++G SC ++ ++RT C + + ++ S+ T+STC+ + +G +
Sbjct: 168 SCQSSGTSSTSCNWQ------SSRTSSTCSCQSSGTSSTSYSCQSSGTSSTCSCQSSGTS 221
Query: 77 ASSASY--STLAAACSLRRSGV-----RWPPSSAYSTWAFASCCASSASCRC-------C 122
++S S S ++ CS + SG W S ST + S SS SC C
Sbjct: 222 STSCSCQSSGTSSTCSCQSSGTSSTSCSWQSSRTSSTCSCQSSGTSSTSCSCQSSGTSST 281
Query: 123 CCCWAAG 129
C C ++G
Sbjct: 282 CSCQSSG 288
Score = 37.7 bits (86), Expect = 0.003
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 35 CAPSTARTPPACM-RPAGPCAPPTWPAPSTTTSTCTSRRAGCTASSASY--STLAAACSL 91
C+ ++RT C + +G + S T+STC+ + +G +++S S S ++ CS
Sbjct: 156 CSYQSSRTSSTCSCQSSGTSSTSCNWQSSRTSSTCSCQSSGTSSTSYSCQSSGTSSTCSC 215
Query: 92 RRSGVRWPPSSAYSTWAFASCCASSASCRCCCCCWAAGAWTS 133
+ SG S S+ ++C S+ C W + +S
Sbjct: 216 QSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSWQSSRTSS 257
Score = 37.0 bits (84), Expect = 0.005
Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 20/107 (18%)
Query: 35 CAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTSRRAGCTASSASYSTLAAACSLRRS 94
C+ ++RT C + S+T+ +C S T S S T + +CS + S
Sbjct: 248 CSWQSSRTSSTCSCQSS--------GTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSCQSS 299
Query: 95 GVRWPPSSAYSTWAFASC------------CASSASCRCCCCCWAAG 129
S +S + SC C SS + C CW++G
Sbjct: 300 RTSSTCSCQFSRTSSTSCSCQSSRTSSTCSCQSSGTSSTSCICWSSG 346
Score = 35.8 bits (81), Expect = 0.011
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 62 STTTSTCTSRRAGCTASSASY--STLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASC 119
S T+STC+ + +G +++S ++ S ++ CS + SG S S+ ++C S+
Sbjct: 34 SQTSSTCSCQSSGTSSTSCNWQSSRTSSTCSCQSSGTSSTSCSCQSSETSSTCSCQSSGT 93
Query: 120 RCCCCCW 126
C W
Sbjct: 94 SSTSCSW 100
Score = 35.4 bits (80), Expect = 0.014
Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 6/114 (5%)
Query: 18 SAAAAGAQCRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTC--TSRRAGC 75
S ++G SC C S + +C +W T+++ C +SR +
Sbjct: 64 SCQSSGTSSTSC----SCQSSETSSTCSCQSSGTSSTSCSWQFSRTSSTCCCQSSRTSST 119
Query: 76 TASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCCCCCWAAG 129
+ S S T + +CS + S S S + SC S+ C C ++G
Sbjct: 120 SCSCQSSRTSSTSCSCQSSRTSSTCSCQTSRTSSTSCSYQSSRTSSTCSCQSSG 173
Score = 35.0 bits (79), Expect = 0.018
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 21/133 (15%)
Query: 18 SAAAAGAQCRSCPFRGG------CAPSTARTPPACMRPAGPCAPPTWPAPST-TTSTCTS 70
S ++G SC ++ C S+ + +C + + + S+ T+STC+
Sbjct: 87 SCQSSGTSSTSCSWQFSRTSSTCCCQSSRTSSTSCSCQSSRTSSTSCSCQSSRTSSTCSC 146
Query: 71 RRAGCTASSASY--STLAAACSLRRSGV-----RWPPSSAYSTWAFASCCASSASCRC-- 121
+ + +++S SY S ++ CS + SG W S ST + S SS S C
Sbjct: 147 QTSRTSSTSCSYQSSRTSSTCSCQSSGTSSTSCNWQSSRTSSTCSCQSSGTSSTSYSCQS 206
Query: 122 -----CCCCWAAG 129
C C ++G
Sbjct: 207 SGTSSTCSCQSSG 219
Score = 35.0 bits (79), Expect = 0.018
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 35 CAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCT--SRRAGCTASSASYSTLAAACSLR 92
C S + + +G + + + T++++C+ S R T S S T + +CS +
Sbjct: 215 CQSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSWQSSRTSSTCSCQSSGTSSTSCSCQ 274
Query: 93 RSGVRWPPSSAYSTWAFASC-CASSASCRCCCCCWAAGAWTS 133
SG S S + SC C SS + C C ++ + TS
Sbjct: 275 SSGTSSTCSCQSSGTSSTSCSCQSSRTSSTCSCQFSRTSSTS 316
Score = 33.1 bits (74), Expect = 0.070
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 62 STTTSTCTSRRAGCTASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRC 121
S+T+ +C S R T+ S S ++ CS + S S S+ ++C S+
Sbjct: 117 SSTSCSCQSSRTSSTSCSCQSSRTSSTCSCQTSRTSSTSCSYQSSRTSSTCSCQSSGTSS 176
Query: 122 CCCCWAAGAWTS 133
C W + +S
Sbjct: 177 TSCNWQSSRTSS 188
Score = 32.7 bits (73), Expect = 0.092
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 14/75 (18%)
Query: 62 STTTSTCTSRRAGCTASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRC 121
+++T +C S + T S S T + +C+ W S ST + S SS SC C
Sbjct: 25 TSSTCSCQSSQTSSTCSCQSSGTSSTSCN-------WQSSRTSSTCSCQSSGTSSTSCSC 77
Query: 122 -------CCCCWAAG 129
C C ++G
Sbjct: 78 QSSETSSTCSCQSSG 92
Score = 32.7 bits (73), Expect = 0.092
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 62 STTTSTCTSRRAGCTASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRC 121
S+T+ +C S R T S + T + +CS + S S S + SC S+
Sbjct: 129 SSTSCSCQSSRTSSTCSCQTSRTSSTSCSYQSSRTSSTCSCQSSGTSSTSCNWQSSRTSS 188
Query: 122 CCCCWAAGAWTSAW 135
C C ++G ++++
Sbjct: 189 TCSCQSSGTSSTSY 202
Score = 27.7 bits (60), Expect = 2.9
Identities = 25/131 (19%), Positives = 53/131 (40%), Gaps = 21/131 (16%)
Query: 18 SAAAAGAQCRSCPFRGGCAPSTARTPPACM-RPAGPCAPPTWPAPSTTTSTCTSRRAGCT 76
S ++G SC ++ ++RT C + +G + S T+STC+ + +G +
Sbjct: 41 SCQSSGTSSTSCNWQ------SSRTSSTCSCQSSGTSSTSCSCQSSETSSTCSCQSSGTS 94
Query: 77 ASSASYS--------------TLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCC 122
++S S+ T + +CS + S S S+ ++C ++
Sbjct: 95 STSCSWQFSRTSSTCCCQSSRTSSTSCSCQSSRTSSTSCSCQSSRTSSTCSCQTSRTSST 154
Query: 123 CCCWAAGAWTS 133
C + + +S
Sbjct: 155 SCSYQSSRTSS 165
Score = 27.3 bits (59), Expect = 3.8
Identities = 16/64 (25%), Positives = 26/64 (40%)
Query: 66 STCTSRRAGCTASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCCCCC 125
+ C RA ++ S S ++ CS + S S S + SC S+ C C
Sbjct: 6 AACKQHRASSSSCSCQSSQTSSTCSCQSSQTSSTCSCQSSGTSSTSCNWQSSRTSSTCSC 65
Query: 126 WAAG 129
++G
Sbjct: 66 QSSG 69
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 42.4 bits (98), Expect = 1e-04
Identities = 30/89 (33%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 2 TPTPTAAWTPPPPLRPSAAAAGAQCRSCPFRGGCAPSTARTPPACM-RPAG--------P 52
TP P + PPPP P A A S APS AR PPA + +P G P
Sbjct: 1266 TPPPVSPKPPPPPTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAKPPGTPPSLGASP 1325
Query: 53 CAPPTWPAPSTTTSTCTSRRAGCTASSAS 81
PP+ AP+ R A A++A+
Sbjct: 1326 AKPPSPGAPALHVPAKPPRAAAAAAAAAA 1354
>gi|13994236 cat eye syndrome chromosome region, candidate 6 isoform
a [Homo sapiens]
Length = 578
Score = 42.0 bits (97), Expect = 2e-04
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 43 PPACM-RPAGPCAPPTWPAPSTTTSTCTSRRAGCTASSASYSTLAAACSLRRSGVRWPPS 101
PPA + PAGP AP + + + T+S+ ++ + C+ ++A + AAA ++ G R
Sbjct: 98 PPAQVGAPAGP-APVAFSSSAATSSSTSTPTSSCSMTAADFGGGAAAGAVGGPGSRSAGG 156
Query: 102 SAYS-TWAFASCCASSASCRCCCCC 125
+ + T + ASCC CCCCC
Sbjct: 157 AGGTGTGSGASCCP------CCCCC 175
>gi|225690558 keratin associated protein 4-7 [Homo sapiens]
Length = 155
Score = 42.0 bits (97), Expect = 2e-04
Identities = 31/109 (28%), Positives = 40/109 (36%), Gaps = 14/109 (12%)
Query: 16 RPSAAAAGAQCRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTSRRAGC 75
RPS CR+ +R C S+ P C C PT P+ +TC R C
Sbjct: 26 RPSCCQTTC-CRTTCYRPSCCVSSCCRPQCCQ---SVCCQPTCCRPTCCETTCCHPRC-C 80
Query: 76 TASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCCCC 124
+S S ++C P S +CC S CR CCC
Sbjct: 81 ISSCCRPSCCMSSCC--------KPQCCQSVCCQPTCCRPSC-CRPCCC 120
>gi|239745805 PREDICTED: keratin associated protein 4.8 [Homo
sapiens]
Length = 185
Score = 42.0 bits (97), Expect = 2e-04
Identities = 31/99 (31%), Positives = 39/99 (39%), Gaps = 8/99 (8%)
Query: 26 CRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTSRRAGCTASSASYSTL 85
C+ R C S+ P C C PT PS S+C R C SS
Sbjct: 60 CQPTCCRPSCCVSSCCKPQCCQ---SVCCQPTCCHPSCCISSCC--RPSCCVSSCCKPQC 114
Query: 86 AAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCCCC 124
+ + + R PS + S+ SCC SS CR CCC
Sbjct: 115 CQSVCCQPNCCR--PSCSISSCCRPSCCESSC-CRPCCC 150
>gi|239745803 PREDICTED: keratin associated protein 4-7 [Homo
sapiens]
Length = 155
Score = 42.0 bits (97), Expect = 2e-04
Identities = 31/109 (28%), Positives = 40/109 (36%), Gaps = 14/109 (12%)
Query: 16 RPSAAAAGAQCRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTSRRAGC 75
RPS CR+ +R C S+ P C C PT P+ +TC R C
Sbjct: 26 RPSCCQTTC-CRTTCYRPSCCVSSCCRPQCCQ---SVCCQPTCCRPTCCETTCCHPRC-C 80
Query: 76 TASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCCCC 124
+S S ++C P S +CC S CR CCC
Sbjct: 81 ISSCCRPSCCMSSCC--------KPQCCQSVCCQPTCCRPSC-CRPCCC 120
>gi|225690554 keratin associated protein 4.8 [Homo sapiens]
Length = 185
Score = 42.0 bits (97), Expect = 2e-04
Identities = 31/99 (31%), Positives = 39/99 (39%), Gaps = 8/99 (8%)
Query: 26 CRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTSRRAGCTASSASYSTL 85
C+ R C S+ P C C PT PS S+C R C SS
Sbjct: 60 CQPTCCRPSCCVSSCCKPQCCQ---SVCCQPTCCHPSCCISSCC--RPSCCVSSCCKPQC 114
Query: 86 AAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCCCC 124
+ + + R PS + S+ SCC SS CR CCC
Sbjct: 115 CQSVCCQPNCCR--PSCSISSCCRPSCCESSC-CRPCCC 150
>gi|239758034 PREDICTED: keratin associated protein 4-8 isoform 3
[Homo sapiens]
Length = 204
Score = 41.6 bits (96), Expect = 2e-04
Identities = 31/99 (31%), Positives = 39/99 (39%), Gaps = 8/99 (8%)
Query: 26 CRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTSRRAGCTASSASYSTL 85
C S R C S+ P C C P PS + S+C R C SS
Sbjct: 79 CISSCCRPSCCVSSCCKPQCCQ---SVCCQPNCCRPSCSISSCC--RPSCCVSSCCKPQC 133
Query: 86 AAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCCCC 124
+ + + R PS + S+ SCC SS CR CCC
Sbjct: 134 CQSVCCQPNCCR--PSCSISSCCRPSCCESSC-CRPCCC 169
Score = 28.9 bits (63), Expect = 1.3
Identities = 28/97 (28%), Positives = 33/97 (34%), Gaps = 23/97 (23%)
Query: 35 CAPSTARTP---PACMRPAGPCAPPTWPAPSTTTSTCTSRRAGCTASSASYSTLAAACSL 91
C PS +T C RP+ PT PS S+C + C S T
Sbjct: 25 CCPSCCQTTCCRTTCYRPS---YSPTCCRPSCCVSSCCKPQ--CCQSVCCQPTCCH---- 75
Query: 92 RRSGVRWPPSSAYSTWAFASCCASSASCRCCC---CC 125
PS S+ SCC SS CC CC
Sbjct: 76 --------PSCCISSCCRPSCCVSSCCKPQCCQSVCC 104
>gi|239758032 PREDICTED: keratin associated protein 4-8 isoform 2
[Homo sapiens]
Length = 193
Score = 41.6 bits (96), Expect = 2e-04
Identities = 31/99 (31%), Positives = 39/99 (39%), Gaps = 8/99 (8%)
Query: 26 CRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTSRRAGCTASSASYSTL 85
C S R C S+ P C C P PS + S+C R C SS
Sbjct: 68 CISSCCRPSCCVSSCCKPQCCQ---SVCCQPNCCRPSCSISSCC--RPSCCVSSCCKPQC 122
Query: 86 AAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCCCC 124
+ + + R PS + S+ SCC SS CR CCC
Sbjct: 123 CQSVCCQPNCCR--PSCSISSCCRPSCCESSC-CRPCCC 158
Score = 26.9 bits (58), Expect = 5.0
Identities = 19/68 (27%), Positives = 24/68 (35%), Gaps = 9/68 (13%)
Query: 61 PSTTTSTCTSRRAGCTASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCR 120
PS +TC R C S S C V P+ + + +SCC S
Sbjct: 27 PSCCQTTCC--RTTCYRPSYSVCCKPQCCQ----SVCCQPTCCHPSCCISSCCRPSCCVS 80
Query: 121 CCC---CC 125
CC CC
Sbjct: 81 SCCKPQCC 88
>gi|239758030 PREDICTED: keratin associated protein 4-8 isoform 1
[Homo sapiens]
Length = 220
Score = 41.6 bits (96), Expect = 2e-04
Identities = 31/99 (31%), Positives = 39/99 (39%), Gaps = 8/99 (8%)
Query: 26 CRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTSRRAGCTASSASYSTL 85
C S R C S+ P C C P PS + S+C R C SS
Sbjct: 95 CISSCCRPSCCVSSCCKPQCCQ---SVCCQPNCCRPSCSISSCC--RPSCCVSSCCKPQC 149
Query: 86 AAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCCCC 124
+ + + R PS + S+ SCC SS CR CCC
Sbjct: 150 CQSVCCQPNCCR--PSCSISSCCRPSCCESSC-CRPCCC 185
Score = 31.6 bits (70), Expect = 0.20
Identities = 28/103 (27%), Positives = 34/103 (33%), Gaps = 20/103 (19%)
Query: 26 CRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTSRRAGCTASSASYSTL 85
CR+ +R + S P C C PT PS S+C + C S T
Sbjct: 35 CRTTCYRPSYSVSCCCRPQCCQ---SVCCQPTCCRPSCCVSSCCKPQ--CCQSVCCQPTC 89
Query: 86 AAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCCC---CC 125
PS S+ SCC SS CC CC
Sbjct: 90 CH------------PSCCISSCCRPSCCVSSCCKPQCCQSVCC 120
>gi|239756798 PREDICTED: similar to keratin associated protein 4-12
isoform 3 [Homo sapiens]
Length = 204
Score = 41.6 bits (96), Expect = 2e-04
Identities = 31/99 (31%), Positives = 39/99 (39%), Gaps = 8/99 (8%)
Query: 26 CRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTSRRAGCTASSASYSTL 85
C S R C S+ P C C P PS + S+C R C SS
Sbjct: 79 CISSCCRPSCCVSSCCKPQCCQ---SVCCQPNCCRPSCSISSCC--RPSCCVSSCCKPQC 133
Query: 86 AAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCCCC 124
+ + + R PS + S+ SCC SS CR CCC
Sbjct: 134 CQSVCCQPNCCR--PSCSISSCCRPSCCESSC-CRPCCC 169
Score = 28.9 bits (63), Expect = 1.3
Identities = 28/97 (28%), Positives = 33/97 (34%), Gaps = 23/97 (23%)
Query: 35 CAPSTARTP---PACMRPAGPCAPPTWPAPSTTTSTCTSRRAGCTASSASYSTLAAACSL 91
C PS +T C RP+ PT PS S+C + C S T
Sbjct: 25 CCPSCCQTTCCRTTCYRPS---YSPTCCRPSCCVSSCCKPQ--CCQSVCCQPTCCH---- 75
Query: 92 RRSGVRWPPSSAYSTWAFASCCASSASCRCCC---CC 125
PS S+ SCC SS CC CC
Sbjct: 76 --------PSCCISSCCRPSCCVSSCCKPQCCQSVCC 104
>gi|239756796 PREDICTED: similar to keratin associated protein 4-12
isoform 2 [Homo sapiens]
Length = 193
Score = 41.6 bits (96), Expect = 2e-04
Identities = 31/99 (31%), Positives = 39/99 (39%), Gaps = 8/99 (8%)
Query: 26 CRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTSRRAGCTASSASYSTL 85
C S R C S+ P C C P PS + S+C R C SS
Sbjct: 68 CISSCCRPSCCVSSCCKPQCCQ---SVCCQPNCCRPSCSISSCC--RPSCCVSSCCKPQC 122
Query: 86 AAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCCCC 124
+ + + R PS + S+ SCC SS CR CCC
Sbjct: 123 CQSVCCQPNCCR--PSCSISSCCRPSCCESSC-CRPCCC 158
Score = 26.9 bits (58), Expect = 5.0
Identities = 19/68 (27%), Positives = 24/68 (35%), Gaps = 9/68 (13%)
Query: 61 PSTTTSTCTSRRAGCTASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCR 120
PS +TC R C S S C V P+ + + +SCC S
Sbjct: 27 PSCCQTTCC--RTTCYRPSYSVCCKPQCCQ----SVCCQPTCCHPSCCISSCCRPSCCVS 80
Query: 121 CCC---CC 125
CC CC
Sbjct: 81 SCCKPQCC 88
>gi|239756794 PREDICTED: similar to keratin associated protein 4-12
isoform 1 [Homo sapiens]
Length = 220
Score = 41.6 bits (96), Expect = 2e-04
Identities = 31/99 (31%), Positives = 39/99 (39%), Gaps = 8/99 (8%)
Query: 26 CRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTSRRAGCTASSASYSTL 85
C S R C S+ P C C P PS + S+C R C SS
Sbjct: 95 CISSCCRPSCCVSSCCKPQCCQ---SVCCQPNCCRPSCSISSCC--RPSCCVSSCCKPQC 149
Query: 86 AAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCCCC 124
+ + + R PS + S+ SCC SS CR CCC
Sbjct: 150 CQSVCCQPNCCR--PSCSISSCCRPSCCESSC-CRPCCC 185
Score = 31.6 bits (70), Expect = 0.20
Identities = 28/103 (27%), Positives = 34/103 (33%), Gaps = 20/103 (19%)
Query: 26 CRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTSRRAGCTASSASYSTL 85
CR+ +R + S P C C PT PS S+C + C S T
Sbjct: 35 CRTTCYRPSYSVSCCCRPQCCQ---SVCCQPTCCRPSCCVSSCCKPQ--CCQSVCCQPTC 89
Query: 86 AAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCCC---CC 125
PS S+ SCC SS CC CC
Sbjct: 90 CH------------PSCCISSCCRPSCCVSSCCKPQCCQSVCC 120
>gi|239751306 PREDICTED: keratin associated protein 4-8 [Homo
sapiens]
Length = 195
Score = 40.8 bits (94), Expect = 3e-04
Identities = 31/99 (31%), Positives = 38/99 (38%), Gaps = 8/99 (8%)
Query: 26 CRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTSRRAGCTASSASYSTL 85
C S R C S+ P C C PT PS S+C R + C +S
Sbjct: 70 CISSCCRPSCCVSSCCKPQCCQ---SVCCQPTCCHPSCCISSCC-RPSCCVSSCCKPQCC 125
Query: 86 AAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCCCC 124
+ C PS + S+ SCC SS CR CCC
Sbjct: 126 QSVCC---QPTCCHPSCSISSCCRPSCCESSC-CRPCCC 160
>gi|13376335 hypothetical protein LOC79946 [Homo sapiens]
Length = 257
Score = 40.4 bits (93), Expect = 4e-04
Identities = 46/171 (26%), Positives = 57/171 (33%), Gaps = 40/171 (23%)
Query: 4 TPTAAWTPP---PPLRPSAAAAG-AQCRSCPFR--GGCAPSTARTP-PACMRPAGPCAPP 56
+P W P P RP+A+AAG C R G STA P RP GP P
Sbjct: 67 SPAPTWPPLCCYPQSRPTASAAGPGACMRASGRPHGNTTASTAPPRHPRPRRPGGPALRP 126
Query: 57 T-----WPAPSTTTSTCTSRRAGCTASSASYSTLAAACSLRRSGVRWP------------ 99
T PAP + C RR + A AC +G W
Sbjct: 127 TPRPCAGPAPPPASRDCRCRRPRRWPRAGRRGRRAGACKPSCAGAAWSARGAPLCSYRTS 186
Query: 100 --------------PSSAYSTWAFASCCASSASCRCCCCCW--AAGAWTSA 134
P+ A + A +SCC +C W A GA +A
Sbjct: 187 CAGSCGARTAPTPAPTCASPSAAASSCCRRRRACSSPTTAWSGACGAGPTA 237
Score = 40.4 bits (93), Expect = 4e-04
Identities = 33/107 (30%), Positives = 43/107 (40%), Gaps = 20/107 (18%)
Query: 2 TPTPTAAWTPPPPLR----------PSAAAAGAQCRSCPFRGGCAPSTARTPPACMRP-- 49
TP P A PPP R P A G + +C A +AR P C
Sbjct: 127 TPRPCAGPAPPPASRDCRCRRPRRWPRAGRRGRRAGACKPSCAGAAWSARGAPLCSYRTS 186
Query: 50 -AGPC----AP---PTWPAPSTTTSTCTSRRAGCTASSASYSTLAAA 88
AG C AP PT +PS S+C RR C++ + ++S A
Sbjct: 187 CAGSCGARTAPTPAPTCASPSAAASSCCRRRRACSSPTTAWSGACGA 233
>gi|239744133 PREDICTED: hypothetical protein [Homo sapiens]
Length = 375
Score = 40.0 bits (92), Expect = 6e-04
Identities = 32/137 (23%), Positives = 49/137 (35%), Gaps = 29/137 (21%)
Query: 18 SAAAAGAQCRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTT-TSTCTSRRAGCT 76
S ++G SC C S + +C +W + T+ T +C S R T
Sbjct: 214 SCQSSGTSSTSC----SCQSSGTSSTCSCQSSGTSSTSCSWQSSRTSSTCSCQSSRTSST 269
Query: 77 ASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCC-----ASSASCRC---------- 121
+ S S ++ CS + SG S S+ ++C SS SC C
Sbjct: 270 SCSCQSSGTSSTCSCQSSGTSSTSCSCQSSRTSSTCSCQFSRTSSTSCSCQSSRTSSTCS 329
Query: 122 ---------CCCCWAAG 129
C CW++G
Sbjct: 330 CQSSGTSSTSCICWSSG 346
Score = 38.5 bits (88), Expect = 0.002
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
Query: 19 AAAAGAQCRSCPFRGGCAPSTARTPPACM-RPAGPCAPPTWPAPSTTTSTCTSRRAGCTA 77
A+++ C+S C+ +++T C + +G + S +STC+ + +G ++
Sbjct: 13 ASSSSCSCQSSQTSSTCSCQSSQTSSTCSCQSSGTSSTSCNWQSSRISSTCSCQSSGTSS 72
Query: 78 SSASY--STLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRC 121
+S S S ++ CS + SG SS +W F+ +S++CRC
Sbjct: 73 TSCSCQSSETSSTCSCQSSGT----SSTSCSWQFS---RTSSTCRC 111
Score = 37.7 bits (86), Expect = 0.003
Identities = 25/102 (24%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Query: 35 CAPSTARTPPACM-RPAGPCAPPTWPAPSTTTSTCTSRRAGCTASSASY--STLAAACSL 91
C+ ++RT C + +G + S T+STC+ + +G +++S S S ++ CS
Sbjct: 156 CSYQSSRTSSTCSCQSSGTSSTSCNWQSSRTSSTCSCQSSGTSSTSYSCQSSGTSSTCSC 215
Query: 92 RRSGVRWPPSSAYSTWAFASCCASSASCRCCCCCWAAGAWTS 133
+ SG S S+ ++C S+ C W + +S
Sbjct: 216 QSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSWQSSRTSS 257
Score = 37.0 bits (84), Expect = 0.005
Identities = 18/67 (26%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 62 STTTSTCTSRRAGCTASSASY--STLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASC 119
S T+STC+ + +G +++S ++ S +++ CS + SG S S+ ++C S+
Sbjct: 34 SQTSSTCSCQSSGTSSTSCNWQSSRISSTCSCQSSGTSSTSCSCQSSETSSTCSCQSSGT 93
Query: 120 RCCCCCW 126
C W
Sbjct: 94 SSTSCSW 100
Score = 35.4 bits (80), Expect = 0.014
Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 2/118 (1%)
Query: 18 SAAAAGAQCRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTSRRAGCTA 77
S ++G SC ++ ST R + R + S+T+ +C S R T
Sbjct: 87 SCQSSGTSSTSCSWQFSRTSSTCRCQSS--RTSSTSCSCQSSRTSSTSCSCQSSRTSSTC 144
Query: 78 SSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCCCCCWAAGAWTSAW 135
S + T + +CS + S S S + SC S+ C C ++G ++++
Sbjct: 145 SCQTSRTSSTSCSYQSSRTSSTCSCQSSGTSSTSCNWQSSRTSSTCSCQSSGTSSTSY 202
Score = 34.7 bits (78), Expect = 0.024
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 3/102 (2%)
Query: 35 CAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCT--SRRAGCTASSASYSTLAAACSLR 92
C S + + +G + + + T++++C+ S R T S S T + +CS +
Sbjct: 215 CQSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSWQSSRTSSTCSCQSSRTSSTSCSCQ 274
Query: 93 RSGVRWPPSSAYSTWAFASC-CASSASCRCCCCCWAAGAWTS 133
SG S S + SC C SS + C C ++ + TS
Sbjct: 275 SSGTSSTCSCQSSGTSSTSCSCQSSRTSSTCSCQFSRTSSTS 316
Score = 32.7 bits (73), Expect = 0.092
Identities = 17/68 (25%), Positives = 31/68 (45%)
Query: 62 STTTSTCTSRRAGCTASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRC 121
+++T +C S + T S S T + +C+ + S + S S + SC S+
Sbjct: 25 TSSTCSCQSSQTSSTCSCQSSGTSSTSCNWQSSRISSTCSCQSSGTSSTSCSCQSSETSS 84
Query: 122 CCCCWAAG 129
C C ++G
Sbjct: 85 TCSCQSSG 92
Score = 27.3 bits (59), Expect = 3.8
Identities = 16/64 (25%), Positives = 26/64 (40%)
Query: 66 STCTSRRAGCTASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCCCCC 125
+ C RA ++ S S ++ CS + S S S + SC S+ C C
Sbjct: 6 AACKQHRASSSSCSCQSSQTSSTCSCQSSQTSSTCSCQSSGTSSTSCNWQSSRISSTCSC 65
Query: 126 WAAG 129
++G
Sbjct: 66 QSSG 69
>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 40.0 bits (92), Expect = 6e-04
Identities = 27/69 (39%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 2 TPTPTAAWTPPPPLRPSAAAAGAQCRSCPFRGGCAPSTARTPPA-CMRPAGPCAPPTWPA 60
TPTPT PP P A G Q +S G P A PP P GP P PA
Sbjct: 594 TPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGPPGPIPVPA 653
Query: 61 P---STTTS 66
P +T+TS
Sbjct: 654 PPQIATSTS 662
Score = 26.6 bits (57), Expect = 6.6
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 36 APSTARTP-PACMRPA----GPCAPPTWPAPSTTTST 67
AP+ A TP P ++P GP A PT P P + ST
Sbjct: 588 APAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGST 624
>gi|209529736 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 40.0 bits (92), Expect = 6e-04
Identities = 27/69 (39%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 2 TPTPTAAWTPPPPLRPSAAAAGAQCRSCPFRGGCAPSTARTPPA-CMRPAGPCAPPTWPA 60
TPTPT PP P A G Q +S G P A PP P GP P PA
Sbjct: 594 TPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGPPGPIPVPA 653
Query: 61 P---STTTS 66
P +T+TS
Sbjct: 654 PPQIATSTS 662
Score = 26.6 bits (57), Expect = 6.6
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 36 APSTARTP-PACMRPA----GPCAPPTWPAPSTTTST 67
AP+ A TP P ++P GP A PT P P + ST
Sbjct: 588 APAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGST 624
>gi|209529734 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 40.0 bits (92), Expect = 6e-04
Identities = 27/69 (39%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 2 TPTPTAAWTPPPPLRPSAAAAGAQCRSCPFRGGCAPSTARTPPA-CMRPAGPCAPPTWPA 60
TPTPT PP P A G Q +S G P A PP P GP P PA
Sbjct: 594 TPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGPPGPIPVPA 653
Query: 61 P---STTTS 66
P +T+TS
Sbjct: 654 PPQIATSTS 662
Score = 26.6 bits (57), Expect = 6.6
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 36 APSTARTP-PACMRPA----GPCAPPTWPAPSTTTST 67
AP+ A TP P ++P GP A PT P P + ST
Sbjct: 588 APAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGST 624
>gi|20986499 mitogen-activated protein kinase 7 isoform 2 [Homo
sapiens]
Length = 677
Score = 40.0 bits (92), Expect = 6e-04
Identities = 27/69 (39%), Positives = 30/69 (43%), Gaps = 4/69 (5%)
Query: 2 TPTPTAAWTPPPPLRPSAAAAGAQCRSCPFRGGCAPSTARTPPA-CMRPAGPCAPPTWPA 60
TPTPT PP P A G Q +S G P A PP P GP P PA
Sbjct: 455 TPTPTPVQPTSPPPGPVAQPTGPQPQSAGSTSGPVPQPACPPPGPAPHPTGPPGPIPVPA 514
Query: 61 P---STTTS 66
P +T+TS
Sbjct: 515 PPQIATSTS 523
Score = 26.6 bits (57), Expect = 6.6
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 36 APSTARTP-PACMRPA----GPCAPPTWPAPSTTTST 67
AP+ A TP P ++P GP A PT P P + ST
Sbjct: 449 APAPAPTPTPTPVQPTSPPPGPVAQPTGPQPQSAGST 485
>gi|123702038 keratin associated protein 5-9 [Homo sapiens]
Length = 169
Score = 40.0 bits (92), Expect = 6e-04
Identities = 31/126 (24%), Positives = 44/126 (34%), Gaps = 19/126 (15%)
Query: 19 AAAAGAQCRSCPFR-GGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTSR------ 71
+ G+ C C G C P+C P C P P+ + S+C R
Sbjct: 7 SGGCGSSCGGCDSSCGSCGSGCRGCGPSCCAPVYCCKPVCCCVPACSCSSCGKRGCGSCG 66
Query: 72 --RAGCTASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCCASSAS-CRCC-CCCWA 127
+ GC + S + C S S+ SCC S C CC CC +
Sbjct: 67 GSKGGCGSCGCSQCSCCKPCCC--------SSGCGSSCCQCSCCKPYCSQCSCCKPCCSS 118
Query: 128 AGAWTS 133
+G +S
Sbjct: 119 SGRGSS 124
Score = 29.3 bits (64), Expect = 1.0
Identities = 36/145 (24%), Positives = 46/145 (31%), Gaps = 41/145 (28%)
Query: 18 SAAAAGAQCRSCPFRGGCAPSTARTPPACMRPA-----------GPCAPPTWPAPSTTTS 66
S + G+ CR C CAP P C PA G C S S
Sbjct: 20 SCGSCGSGCRGCG-PSCCAPVYCCKPVCCCVPACSCSSCGKRGCGSCGGSKGGCGSCGCS 78
Query: 67 TCTSRRAGCTASSASYSTLAAAC----------------------SLRRSGVRWPPSSAY 104
C+ + C +S S +C S +S P S
Sbjct: 79 QCSCCKPCCCSSGCGSSCCQCSCCKPYCSQCSCCKPCCSSSGRGSSCCQSSCCKPCCS-- 136
Query: 105 STWAFASCCASSASCRCCC----CC 125
S+ +SCC SS C+ CC CC
Sbjct: 137 SSGCGSSCCQSSC-CKPCCSQSRCC 160
>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
sapiens]
Length = 505
Score = 39.7 bits (91), Expect = 7e-04
Identities = 25/62 (40%), Positives = 26/62 (41%), Gaps = 5/62 (8%)
Query: 5 PTAAWTPPPPLRPSAAAAGAQCRSC-----PFRGGCAPSTARTPPACMRPAGPCAPPTWP 59
PTAA PPPP RPS A P APS PP + GP APP P
Sbjct: 318 PTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVGPVAPPPPP 377
Query: 60 AP 61
P
Sbjct: 378 PP 379
Score = 36.2 bits (82), Expect = 0.008
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 3 PTPTAAWTPPPPLRPSAAAAGAQCRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPA 60
P P + PPPP PS+A +G P G P PP P GP PP P+
Sbjct: 337 PPPNRMYPPPPPALPSSAPSGPPPPP-PSVLGVGPVAPPPPPPPPPPPGPPPPPGLPS 393
Score = 28.5 bits (62), Expect = 1.7
Identities = 18/54 (33%), Positives = 21/54 (38%), Gaps = 8/54 (14%)
Query: 3 PTPTAAWTPPPPLRPSAAAAGAQCRSCPFRGGCAPSTARTPPACMRPAGPCAPP 56
P P + PPPP R A R AP+ A PP RP+ PP
Sbjct: 292 PPPHNSGPPPPPARGRGAPPPPPSR--------APTAAPPPPPPSRPSVAVPPP 337
Score = 27.7 bits (60), Expect = 2.9
Identities = 17/53 (32%), Positives = 20/53 (37%), Gaps = 2/53 (3%)
Query: 3 PTPTAAWTPPPPLRPSAAAAGAQCRSCPFRGGCAPSTARTPPACMRPAGPCAP 55
P P+ PPPP P +G RG P +R P A P P P
Sbjct: 280 PPPSRGGPPPPP--PPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRP 330
>gi|154426272 hypothetical protein LOC54540 [Homo sapiens]
Length = 789
Score = 39.7 bits (91), Expect = 7e-04
Identities = 41/153 (26%), Positives = 53/153 (34%), Gaps = 33/153 (21%)
Query: 5 PTAAWTPPPP-LRPSAAAAG--AQCRSCPFRGGCAPSTA----------------RTPP- 44
P++ +PP P L P+ AA AQ CP AP T + PP
Sbjct: 153 PSSFGSPPHPHLLPTTPAAPFPAQASECPVAAATAPHTPGPCQSSHLPSTSMPLLKMPPP 212
Query: 45 --ACMRPA-----GPCAPPTWPAPSTTTSTCTSRRAGCTASSASYSTLAAACSLRRSGVR 97
C P G C+ P P PS+ T R GC ++S LA
Sbjct: 213 FSGCSHPCSGHCGGHCSGPLLPPPSSQPLPSTHRDPGCKGHKFAHSGLACQLPQPCEADE 272
Query: 98 WPPSSAYSTWAFASCCASSAS------CRCCCC 124
S+ +SC +SS C CC C
Sbjct: 273 GLGEEEDSSSERSSCTSSSTHQRDGKFCDCCYC 305
>gi|154146260 keratin associated protein 4-3 [Homo sapiens]
Length = 195
Score = 39.7 bits (91), Expect = 7e-04
Identities = 35/117 (29%), Positives = 42/117 (35%), Gaps = 14/117 (11%)
Query: 16 RPSAAAAGAQCRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTS----R 71
RPS + SC C PS RT C RP+ C + PS S+C R
Sbjct: 41 RPSCCISSCCRPSCCISSCCKPSCCRT--TCCRPS--CCISSCCRPSCCISSCCKPSCCR 96
Query: 72 RAGCTASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCCC---CC 125
C S S +C + PS +T SCC SS CC CC
Sbjct: 97 TTCCRPSCCISSCCRPSCCISSC---CKPSCCQTTCCRPSCCISSCYRPQCCQPSCC 150
Score = 38.5 bits (88), Expect = 0.002
Identities = 34/116 (29%), Positives = 43/116 (37%), Gaps = 12/116 (10%)
Query: 16 RPSAAAAGAQCRSCPFRGGCAPSTARTPPACMRPAGPCAPPTWPAPSTTTSTCTSR---R 72
RPS + SC C PS RT C RP+ C + PS S+C +
Sbjct: 71 RPSCCISSCCRPSCCISSCCKPSCCRT--TCCRPS--CCISSCCRPSCCISSCCKPSCCQ 126
Query: 73 AGCTASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCRCCC---CC 125
C S S+ + S R P+ S+ SCC SS C C CC
Sbjct: 127 TTCCRPSCCISSCYRPQCCQPSCCR--PACCISSCCHPSCCVSSCRCPFSCPTTCC 180
Score = 28.1 bits (61), Expect = 2.3
Identities = 21/64 (32%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Query: 61 PSTTTSTCTSRRAGCTASSASYSTLAAACSLRRSGVRWPPSSAYSTWAFASCCASSASCR 120
PS +TC R C S S +C + PS +T SCC SS CR
Sbjct: 27 PSCCQTTCC-RTTCCRPSCCISSCCRPSCCISSC---CKPSCCRTTCCRPSCCISSC-CR 81
Query: 121 CCCC 124
CC
Sbjct: 82 PSCC 85
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.125 0.475
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,625,417
Number of Sequences: 37866
Number of extensions: 442788
Number of successful extensions: 6786
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 242
Number of HSP's successfully gapped in prelim test: 681
Number of HSP's that attempted gapping in prelim test: 4355
Number of HSP's gapped (non-prelim): 2350
length of query: 135
length of database: 18,247,518
effective HSP length: 91
effective length of query: 44
effective length of database: 14,801,712
effective search space: 651275328
effective search space used: 651275328
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.