Guide to the Human Genome
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Search of human proteins with 153791741

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|153791741 hypothetical protein LOC729355 [Homo sapiens]
         (124 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|153791741 hypothetical protein LOC729355 [Homo sapiens]            265   5e-72
gi|7706743 TP53 target 3 [Homo sapiens]                               265   5e-72
gi|169209862 PREDICTED: similar to TP53 target 3 isoform 3 [Homo...   259   5e-70
gi|239745531 PREDICTED: similar to TP53 target 3 isoform 1 [Homo...   258   1e-69
gi|169209864 PREDICTED: similar to TP53 target 3 isoform 2 [Homo...   174   2e-44
gi|27502386 nuclear factor of activated T-cells, cytosolic compo...    35   0.019
gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens]     34   0.033
gi|6912446 potassium voltage-gated channel, subfamily H, member ...    32   0.12 
gi|169161777 PREDICTED: hypothetical protein [Homo sapiens]            31   0.28 
gi|169161622 PREDICTED: hypothetical protein [Homo sapiens]            31   0.28 
gi|169162826 PREDICTED: hypothetical protein [Homo sapiens]            31   0.28 
gi|224465184 nuclear factor I/A isoform 4 [Homo sapiens]               30   0.36 
gi|224465182 nuclear factor I/A isoform 3 [Homo sapiens]               30   0.36 
gi|197927284 nuclear factor I/A isoform 1 [Homo sapiens]               30   0.36 
gi|239756560 PREDICTED: hypothetical protein [Homo sapiens]            30   0.47 
gi|239745525 PREDICTED: hypothetical protein [Homo sapiens]            30   0.47 
gi|237512940 early growth response 4 [Homo sapiens]                    30   0.47 
gi|56790299 pleckstrin and Sec7 domain containing [Homo sapiens]       30   0.47 
gi|169178932 PREDICTED: hypothetical protein [Homo sapiens]            30   0.62 
gi|169172282 PREDICTED: similar to hCG1818014 [Homo sapiens]           30   0.62 
gi|169176343 PREDICTED: hypothetical protein [Homo sapiens]            30   0.62 
gi|157738639 tensin 4 [Homo sapiens]                                   30   0.62 
gi|63252910 IQ motif and WD repeats 1 isoform b [Homo sapiens]         29   0.81 
gi|63252908 IQ motif and WD repeats 1 isoform a [Homo sapiens]         29   0.81 
gi|221139926 NHS-like 1 [Homo sapiens]                                 29   0.81 
gi|239755778 PREDICTED: mucin 19, oligomeric [Homo sapiens]            29   0.81 
gi|239750280 PREDICTED: mucin 19, oligomeric [Homo sapiens]            29   0.81 
gi|239744589 PREDICTED: mucin 19 [Homo sapiens]                        29   0.81 
gi|239743293 PREDICTED: mucin 12 [Homo sapiens]                        29   0.81 
gi|38683827 ADAM metallopeptidase with thrombospondin type 1 mot...    29   0.81 

>gi|153791741 hypothetical protein LOC729355 [Homo sapiens]
          Length = 124

 Score =  265 bits (678), Expect = 5e-72
 Identities = 124/124 (100%), Positives = 124/124 (100%)

Query: 1   MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
           MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC
Sbjct: 1   MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60

Query: 61  CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120
           CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS
Sbjct: 61  CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120

Query: 121 SFSG 124
           SFSG
Sbjct: 121 SFSG 124


>gi|7706743 TP53 target 3 [Homo sapiens]
          Length = 124

 Score =  265 bits (678), Expect = 5e-72
 Identities = 124/124 (100%), Positives = 124/124 (100%)

Query: 1   MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
           MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC
Sbjct: 1   MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60

Query: 61  CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120
           CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS
Sbjct: 61  CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120

Query: 121 SFSG 124
           SFSG
Sbjct: 121 SFSG 124


>gi|169209862 PREDICTED: similar to TP53 target 3 isoform 3 [Homo
           sapiens]
          Length = 167

 Score =  259 bits (661), Expect = 5e-70
 Identities = 121/123 (98%), Positives = 121/123 (98%)

Query: 1   MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
           MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC
Sbjct: 1   MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60

Query: 61  CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120
           CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS
Sbjct: 61  CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120

Query: 121 SFS 123
             S
Sbjct: 121 RLS 123


>gi|239745531 PREDICTED: similar to TP53 target 3 isoform 1 [Homo
           sapiens]
          Length = 132

 Score =  258 bits (658), Expect = 1e-69
 Identities = 120/120 (100%), Positives = 120/120 (100%)

Query: 1   MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
           MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC
Sbjct: 1   MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60

Query: 61  CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120
           CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS
Sbjct: 61  CFQISPAEETLELGRLVSPGNCDTLSPRAAGFYACHVRSLIPCRSTKGRWPLTASAAGLS 120


>gi|169209864 PREDICTED: similar to TP53 target 3 isoform 2 [Homo
          sapiens]
          Length = 102

 Score =  174 bits (441), Expect = 2e-44
 Identities = 81/88 (92%), Positives = 84/88 (95%)

Query: 1  MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60
          MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC
Sbjct: 1  MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPC 60

Query: 61 CFQISPAEETLELGRLVSPGNCDTLSPR 88
          CFQISPAEETLELGRLVSPG   + +P+
Sbjct: 61 CFQISPAEETLELGRLVSPGCHKSSAPQ 88


>gi|27502386 nuclear factor of activated T-cells, cytosolic
           component 1 isoform C [Homo sapiens]
          Length = 930

 Score = 34.7 bits (78), Expect = 0.019
 Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 3/64 (4%)

Query: 5   PCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQ- 63
           P  + P +   P P+ L     + P +  P  +E     CP+  SP + P  +EP C Q 
Sbjct: 793 PVATHPGSPGQPPPALLPQQVSAPPSSSCPPGLEHSL--CPSSPSPPLPPATQEPTCLQP 850

Query: 64  ISPA 67
            SPA
Sbjct: 851 CSPA 854


>gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens]
          Length = 2013

 Score = 33.9 bits (76), Expect = 0.033
 Identities = 33/103 (32%), Positives = 44/103 (42%), Gaps = 15/103 (14%)

Query: 4    SPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQ 63
            +P     +A   P  SA   TAG+ P TR P      SA  P         CGE+ C + 
Sbjct: 1343 TPSNGPSSAHTGPPSSAWPTTAGTSPRTRLP----TASASLPPV-------CGEK-CLW- 1389

Query: 64   ISPAEETLELGRLVSPGNCDTL-SPRAAGFYACHVRSLIPCRS 105
             SP  +    GR    G+ DTL + RA G+  C     + CR+
Sbjct: 1390 -SPWMDVSRPGRGTDSGDFDTLENLRAHGYRVCESPRSVECRA 1431



 Score = 28.1 bits (61), Expect = 1.8
 Identities = 27/95 (28%), Positives = 40/95 (42%), Gaps = 13/95 (13%)

Query: 16   PRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPAEETLELGR 75
            P P  +  T+ S   T TPGT    S   P    P+ S C +E C +      E ++ G 
Sbjct: 1540 PSPPPVPATSTSSMSTTTPGTSVVSSK--PTLTEPSTSSCLQELCTW-----TEWID-GS 1591

Query: 76   LVSP----GNCDTL-SPRAAGFYACHVRSLIPCRS 105
              +P    G+ DT  + R  G+  C     + CR+
Sbjct: 1592 YPAPGINGGDFDTFQNLRDEGYTFCESPRSVQCRA 1626


>gi|6912446 potassium voltage-gated channel, subfamily H, member 4
           [Homo sapiens]
          Length = 1017

 Score = 32.0 bits (71), Expect = 0.12
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 5/63 (7%)

Query: 28  GPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPAEETLELGRLVSPGNCDTLSP 87
           GP     G+      PCP  R P +SPC   P      P+ +   L  +  P +  T+  
Sbjct: 913 GPPGHPAGSAWTPDPPCPQLRPPCLSPCASRP-----PPSLQDTTLAEVHCPASVGTMET 967

Query: 88  RAA 90
             A
Sbjct: 968 GTA 970


>gi|169161777 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 190

 Score = 30.8 bits (68), Expect = 0.28
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 4/91 (4%)

Query: 4   SPCISQPAASWHPRPSALRPTAGSGPDTRTPGT----VEDGSAPCPAFRSPAVSPCGEEP 59
           SP +S    S   +  A  PT     D+  PG     +  G+A  P  ++  V       
Sbjct: 83  SPSLSLTPGSGSEKREAGGPTGPKREDSALPGASTSHLPAGTADPPPPQAGLVRDSRAGQ 142

Query: 60  CCFQISPAEETLELGRLVSPGNCDTLSPRAA 90
              Q +P +  +ELG  V  G+C +L P+ A
Sbjct: 143 TAVQTAPWQVGVELGVWVGLGSCGSLRPQLA 173


>gi|169161622 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 190

 Score = 30.8 bits (68), Expect = 0.28
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 4/91 (4%)

Query: 4   SPCISQPAASWHPRPSALRPTAGSGPDTRTPGT----VEDGSAPCPAFRSPAVSPCGEEP 59
           SP +S    S   +  A  PT     D+  PG     +  G+A  P  ++  V       
Sbjct: 83  SPSLSLTPGSGSEKREAGGPTGPKREDSALPGASTSHLPAGTADPPPPQAGLVRDSRAGQ 142

Query: 60  CCFQISPAEETLELGRLVSPGNCDTLSPRAA 90
              Q +P +  +ELG  V  G+C +L P+ A
Sbjct: 143 TAVQTAPWQVGVELGVWVGLGSCGSLRPQLA 173


>gi|169162826 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 190

 Score = 30.8 bits (68), Expect = 0.28
 Identities = 25/91 (27%), Positives = 38/91 (41%), Gaps = 4/91 (4%)

Query: 4   SPCISQPAASWHPRPSALRPTAGSGPDTRTPGT----VEDGSAPCPAFRSPAVSPCGEEP 59
           SP +S    S   +  A  PT     D+  PG     +  G+A  P  ++  V       
Sbjct: 83  SPSLSLTPGSGSEKREAGGPTGPKREDSALPGASTSHLPAGTADPPPPQAGLVRDSRAGQ 142

Query: 60  CCFQISPAEETLELGRLVSPGNCDTLSPRAA 90
              Q +P +  +ELG  V  G+C +L P+ A
Sbjct: 143 TAVQTAPWQVGVELGVWVGLGSCGSLRPQLA 173


>gi|224465184 nuclear factor I/A isoform 4 [Homo sapiens]
          Length = 554

 Score = 30.4 bits (67), Expect = 0.36
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)

Query: 4   SPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSA---PCPAFRSPAVSP 54
           +P +  P     P P   RP     PDT+ P T  +G A     P + +P+ SP
Sbjct: 474 NPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPTYSTPSTSP 527


>gi|224465182 nuclear factor I/A isoform 3 [Homo sapiens]
          Length = 501

 Score = 30.4 bits (67), Expect = 0.36
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)

Query: 4   SPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSA---PCPAFRSPAVSP 54
           +P +  P     P P   RP     PDT+ P T  +G A     P + +P+ SP
Sbjct: 421 NPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPTYSTPSTSP 474


>gi|197927284 nuclear factor I/A isoform 1 [Homo sapiens]
          Length = 509

 Score = 30.4 bits (67), Expect = 0.36
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 3/54 (5%)

Query: 4   SPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSA---PCPAFRSPAVSP 54
           +P +  P     P P   RP     PDT+ P T  +G A     P + +P+ SP
Sbjct: 429 NPFLPTPMLPPPPPPPMARPVPLPVPDTKPPTTSTEGGAASPTSPTYSTPSTSP 482


>gi|239756560 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 178

 Score = 30.0 bits (66), Expect = 0.47
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 10  PAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCP 45
           P   +   P +LRP A SG     PG V  GS PCP
Sbjct: 135 PLPQYAVSPRSLRPEARSGVPRGPPG-VSPGSTPCP 169


>gi|239745525 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 178

 Score = 30.0 bits (66), Expect = 0.47
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 10  PAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCP 45
           P   +   P +LRP A SG     PG V  GS PCP
Sbjct: 135 PLPQYAVSPRSLRPEARSGVPRGPPG-VSPGSTPCP 169


>gi|237512940 early growth response 4 [Homo sapiens]
          Length = 589

 Score = 30.0 bits (66), Expect = 0.47
 Identities = 15/51 (29%), Positives = 22/51 (43%)

Query: 7  ISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGE 57
          + +P ++   R +A R   G     R P +   G  P P  R+P    CGE
Sbjct: 25 LGEPGSALERRGAAARGRCGRARAPRLPDSFPRGECPKPGARAPRSVRCGE 75


>gi|56790299 pleckstrin and Sec7 domain containing [Homo sapiens]
          Length = 1024

 Score = 30.0 bits (66), Expect = 0.47
 Identities = 21/50 (42%), Positives = 25/50 (50%), Gaps = 6/50 (12%)

Query: 8  SQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFR---SPAVSP 54
          S PA+ +    S LR  AG GP  R  G V   +APC   R   SP V+P
Sbjct: 34 SPPASMYGSTGSLLRRVAGPGPRGRELGRV---TAPCTPLRGPPSPRVAP 80


>gi|169178932 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 62

 Score = 29.6 bits (65), Expect = 0.62
 Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 10/58 (17%)

Query: 1  MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEE 58
          MR SP  S P     PR        G GP+ R PG    G  P PA  S   + C  E
Sbjct: 1  MRRSPASSPPGGE--PR--------GLGPERRQPGCSPPGELPSPAGDSGEPADCEAE 48


>gi|169172282 PREDICTED: similar to hCG1818014 [Homo sapiens]
          Length = 127

 Score = 29.6 bits (65), Expect = 0.62
 Identities = 13/30 (43%), Positives = 16/30 (53%)

Query: 16  PRPSALRPTAGSGPDTRTPGTVEDGSAPCP 45
           PRPS L  + GS PD + P      +AP P
Sbjct: 92  PRPSDLNSSTGSSPDLQLPDPQTPTAAPAP 121


>gi|169176343 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 62

 Score = 29.6 bits (65), Expect = 0.62
 Identities = 21/58 (36%), Positives = 23/58 (39%), Gaps = 10/58 (17%)

Query: 1  MRASPCISQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEE 58
          MR SP  S P     PR        G GP+ R PG    G  P PA  S   + C  E
Sbjct: 1  MRRSPASSPPGGE--PR--------GLGPERRQPGCSPPGELPSPAGDSGEPADCEAE 48


>gi|157738639 tensin 4 [Homo sapiens]
          Length = 715

 Score = 29.6 bits (65), Expect = 0.62
 Identities = 17/34 (50%), Positives = 20/34 (58%), Gaps = 7/34 (20%)

Query: 23  PTAGSGPDTRTPG---TVEDGSA----PCPAFRS 49
           P  GS P  RTPG   +V+ G+A    PCPA RS
Sbjct: 381 PEPGSSPPQRTPGHQNSVQPGAASPSNPCPATRS 414


>gi|63252910 IQ motif and WD repeats 1 isoform b [Homo sapiens]
          Length = 860

 Score = 29.3 bits (64), Expect = 0.81
 Identities = 22/89 (24%), Positives = 29/89 (32%)

Query: 8   SQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPA 67
           S+P         +  PT  S PD     T  +   P   F  P+ S           SP 
Sbjct: 369 SRPRGGTSQSDISTLPTVPSSPDLEVSETAMEVDTPAEQFLQPSTSSTMSAQAHSTSSPT 428

Query: 68  EETLELGRLVSPGNCDTLSPRAAGFYACH 96
           E       L SP +    S  A+G +  H
Sbjct: 429 ESPHSTPLLSSPDSEQRQSVEASGHHTHH 457


>gi|63252908 IQ motif and WD repeats 1 isoform a [Homo sapiens]
          Length = 880

 Score = 29.3 bits (64), Expect = 0.81
 Identities = 22/89 (24%), Positives = 29/89 (32%)

Query: 8   SQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPA 67
           S+P         +  PT  S PD     T  +   P   F  P+ S           SP 
Sbjct: 369 SRPRGGTSQSDISTLPTVPSSPDLEVSETAMEVDTPAEQFLQPSTSSTMSAQAHSTSSPT 428

Query: 68  EETLELGRLVSPGNCDTLSPRAAGFYACH 96
           E       L SP +    S  A+G +  H
Sbjct: 429 ESPHSTPLLSSPDSEQRQSVEASGHHTHH 457


>gi|221139926 NHS-like 1 [Homo sapiens]
          Length = 1606

 Score = 29.3 bits (64), Expect = 0.81
 Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 1/46 (2%)

Query: 21  LRPTAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISP 66
           L P  GS P    P  V     PCPA RSP + P      C Q SP
Sbjct: 920 LDPAVGS-PPAPPPPPVPSPPFPCPADRSPFLPPPPPVTDCSQGSP 964


>gi|239755778 PREDICTED: mucin 19, oligomeric [Homo sapiens]
          Length = 598

 Score = 29.3 bits (64), Expect = 0.81
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 9/72 (12%)

Query: 24  TAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPAEET----LELGRLVSP 79
           T GSG +T T G V   +    +F + A S   E P     +P  E     +  G  V+P
Sbjct: 114 TTGSGMNTGTTGVVSGNTISPSSFNTEATSGTSERP-----NPGSEIGTTGIVSGTTVAP 168

Query: 80  GNCDTLSPRAAG 91
           G+ +T +  + G
Sbjct: 169 GSSNTEATTSLG 180


>gi|239750280 PREDICTED: mucin 19, oligomeric [Homo sapiens]
          Length = 598

 Score = 29.3 bits (64), Expect = 0.81
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 9/72 (12%)

Query: 24  TAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPAEET----LELGRLVSP 79
           T GSG +T T G V   +    +F + A S   E P     +P  E     +  G  V+P
Sbjct: 114 TTGSGMNTGTTGVVSGNTISPSSFNTEATSGTSERP-----NPGSEIGTTGIVSGTTVAP 168

Query: 80  GNCDTLSPRAAG 91
           G+ +T +  + G
Sbjct: 169 GSSNTEATTSLG 180


>gi|239744589 PREDICTED: mucin 19 [Homo sapiens]
          Length = 598

 Score = 29.3 bits (64), Expect = 0.81
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 9/72 (12%)

Query: 24  TAGSGPDTRTPGTVEDGSAPCPAFRSPAVSPCGEEPCCFQISPAEET----LELGRLVSP 79
           T GSG +T T G V   +    +F + A S   E P     +P  E     +  G  V+P
Sbjct: 114 TTGSGMNTGTTGVVSGNTISPSSFNTEATSGTSERP-----NPGSEIGTTGIVSGTTVAP 168

Query: 80  GNCDTLSPRAAG 91
           G+ +T +  + G
Sbjct: 169 GSSNTEATTSLG 180


>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
          Length = 5478

 Score = 29.3 bits (64), Expect = 0.81
 Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 8    SQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAF-RSPAVSPCGEEPCCFQISP 66
            SQP ++      A   T G   ++ T  +   GS     F R+P  S  GEEP  F   P
Sbjct: 2360 SQPGSTHSTVSPASTTTPGLSEESTTVYSSSPGSTETTVFPRTPTTSVRGEEPTTFHSRP 2419

Query: 67   A 67
            A
Sbjct: 2420 A 2420



 Score = 27.3 bits (59), Expect = 3.1
 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 8    SQPAASWHPRPSALRPTAGSGPDTRTPGTVEDGSAPCPAF-RSPAVSPCGEEPCCFQISP 66
            SQP ++      A   T G   ++ T  +   GS     F RS   S  GEEP  F   P
Sbjct: 2834 SQPGSTHSTVSPASTTTPGLSEESTTVYSSSPGSTETTVFPRSTTTSVRGEEPTTFHSRP 2893

Query: 67   A 67
            A
Sbjct: 2894 A 2894


>gi|38683827 ADAM metallopeptidase with thrombospondin type 1 motif, 7
            preproprotein [Homo sapiens]
          Length = 1686

 Score = 29.3 bits (64), Expect = 0.81
 Identities = 27/101 (26%), Positives = 35/101 (34%), Gaps = 21/101 (20%)

Query: 3    ASPCISQPAASWHPRP-SALRPTAGSGPDTRTPGTVEDGSA---------PCPAFRSPAV 52
            A  C  +P A+WH    S    + G G   R    V+             P PA + PA 
Sbjct: 1455 ARRCHLRPCATWHSGNWSKCSRSCGGGSSVRDVQCVDTRDLRPLRPFHCQPGPA-KPPAH 1513

Query: 53   SPCGEEPC----------CFQISPAEETLELGRLVSPGNCD 83
             PCG +PC          C +     E   L     PG C+
Sbjct: 1514 RPCGAQPCLSWYTSSWRECSEACGGGEQQRLVTCPEPGLCE 1554


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.132    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,344,955
Number of Sequences: 37866
Number of extensions: 370757
Number of successful extensions: 1793
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 1662
Number of HSP's gapped (non-prelim): 238
length of query: 124
length of database: 18,247,518
effective HSP length: 89
effective length of query: 35
effective length of database: 14,877,444
effective search space: 520710540
effective search space used: 520710540
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
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