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Search of human proteins with 153281202
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|153281202 neuropeptide W preproprotein [Homo sapiens]
(165 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|153281202 neuropeptide W preproprotein [Homo sapiens] 337 2e-93
gi|22507403 preproneuropeptide B [Homo sapiens] 54 5e-08
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 38 0.003
gi|45827729 scribble isoform b [Homo sapiens] 38 0.005
gi|45827731 scribble isoform a [Homo sapiens] 38 0.005
gi|169171558 PREDICTED: hypothetical protein [Homo sapiens] 37 0.006
gi|71979665 growth factor receptor-bound protein 7 [Homo sapiens] 35 0.030
gi|71979667 growth factor receptor-bound protein 7 [Homo sapiens] 35 0.030
gi|239755509 PREDICTED: hypothetical protein [Homo sapiens] 34 0.050
gi|239750019 PREDICTED: hypothetical protein [Homo sapiens] 34 0.050
gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo ... 34 0.050
gi|239752942 PREDICTED: hypothetical protein [Homo sapiens] 33 0.086
gi|239747476 PREDICTED: hypothetical protein XP_002347543 [Homo ... 33 0.086
gi|239741348 PREDICTED: hypothetical protein XP_002342180 [Homo ... 33 0.086
gi|68989256 ras inhibitor RIN1 [Homo sapiens] 33 0.086
gi|4826908 phosphoinositide-3-kinase, regulatory subunit 2 (beta... 33 0.11
gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens] 33 0.11
gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens] 33 0.11
gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens] 33 0.11
gi|210032580 SET domain containing 1B [Homo sapiens] 33 0.15
gi|61966761 leucine rich repeat containing 26 [Homo sapiens] 32 0.25
gi|56118234 proline rich 6 [Homo sapiens] 32 0.25
gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 32 0.33
gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 32 0.33
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin... 32 0.33
gi|169167742 PREDICTED: ankyrin repeat domain 33B [Homo sapiens] 31 0.43
gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens] 31 0.43
gi|239742483 PREDICTED: ankyrin repeat domain 33B [Homo sapiens] 31 0.43
gi|151101449 solute carrier family 4, sodium bicarbonate cotrans... 31 0.56
gi|194353976 transcription factor AP-2 epsilon (activating enhan... 31 0.56
>gi|153281202 neuropeptide W preproprotein [Homo sapiens]
Length = 165
Score = 337 bits (865), Expect = 2e-93
Identities = 165/165 (100%), Positives = 165/165 (100%)
Query: 1 MAWRPGERGAPASRPRLALLLLLLLLPLPSGAWYKHVASPRYHTVGRAAGLLMGLRRSPY 60
MAWRPGERGAPASRPRLALLLLLLLLPLPSGAWYKHVASPRYHTVGRAAGLLMGLRRSPY
Sbjct: 1 MAWRPGERGAPASRPRLALLLLLLLLPLPSGAWYKHVASPRYHTVGRAAGLLMGLRRSPY 60
Query: 61 LWRRALRAAAGPLARDTLSPEPAAREAPLLLPSWVQELWETRRRSSQAGIPVRAPRSPRA 120
LWRRALRAAAGPLARDTLSPEPAAREAPLLLPSWVQELWETRRRSSQAGIPVRAPRSPRA
Sbjct: 61 LWRRALRAAAGPLARDTLSPEPAAREAPLLLPSWVQELWETRRRSSQAGIPVRAPRSPRA 120
Query: 121 PEPALEPESLDFSGAGQRLRRDVSRPAVDPAANRLGLPCLAPGPF 165
PEPALEPESLDFSGAGQRLRRDVSRPAVDPAANRLGLPCLAPGPF
Sbjct: 121 PEPALEPESLDFSGAGQRLRRDVSRPAVDPAANRLGLPCLAPGPF 165
>gi|22507403 preproneuropeptide B [Homo sapiens]
Length = 125
Score = 54.3 bits (129), Expect = 5e-08
Identities = 33/64 (51%), Positives = 35/64 (54%)
Query: 18 ALLLLLLLLPLPSGAWYKHVASPRYHTVGRAAGLLMGLRRSPYLWRRALRAAAGPLARDT 77
A L L LLL P AWYK A ++VGRAAGLL GLRRSPY R A P
Sbjct: 10 AALALCLLLAPPGLAWYKPAAGHSSYSVGRAAGLLSGLRRSPYARRSQPYRGAEPPGGAG 69
Query: 78 LSPE 81
SPE
Sbjct: 70 ASPE 73
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 38.1 bits (87), Expect = 0.003
Identities = 34/105 (32%), Positives = 46/105 (43%), Gaps = 10/105 (9%)
Query: 63 RRALRAAAGPLARDTLSPEPAAREAPLLLPSWVQELWETRRRSSQAGIPVRAPRSPRAPE 122
R + A GP +D+L +AR PS+ +++E S G P R+PR E
Sbjct: 1055 REEVVAHPGPEEQDSLLQRKSARRCVKQRPSY--DIFEDSDDSEPGGPPAPRRRTPRENE 1112
Query: 123 -PALEPESLDFSGAGQRLRRDVSRPAVD-PAANRLGLPCLAPGPF 165
P EPE R R+ +P + A RL LAPGPF
Sbjct: 1113 LPLPEPEEQS------RPRKPTLQPVLQLKARRRLDKDALAPGPF 1151
>gi|45827729 scribble isoform b [Homo sapiens]
Length = 1630
Score = 37.7 bits (86), Expect = 0.005
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Query: 68 AAAGPLARDTLSP---EPAAREAPLLLPSWVQELWETRRRSSQAGIPVRAPRSPRAPEPA 124
AA G +A SP +P + +P LP+ V++ + + P AP P P PA
Sbjct: 1287 AAGGKMAESPCSPSGQQPPSPPSPDELPANVKQAYRAFAAVPTSHPPEDAPAQPPTPGPA 1346
Query: 125 LEPESLDFSGAGQRLRRDVSRPAVDPAANRLGL 157
PE L F + +V P + R+ L
Sbjct: 1347 ASPEQLSFRERQKYFELEVRVPQAEGPPKRVSL 1379
>gi|45827731 scribble isoform a [Homo sapiens]
Length = 1655
Score = 37.7 bits (86), Expect = 0.005
Identities = 26/93 (27%), Positives = 39/93 (41%), Gaps = 3/93 (3%)
Query: 68 AAAGPLARDTLSP---EPAAREAPLLLPSWVQELWETRRRSSQAGIPVRAPRSPRAPEPA 124
AA G +A SP +P + +P LP+ V++ + + P AP P P PA
Sbjct: 1287 AAGGKMAESPCSPSGQQPPSPPSPDELPANVKQAYRAFAAVPTSHPPEDAPAQPPTPGPA 1346
Query: 125 LEPESLDFSGAGQRLRRDVSRPAVDPAANRLGL 157
PE L F + +V P + R+ L
Sbjct: 1347 ASPEQLSFRERQKYFELEVRVPQAEGPPKRVSL 1379
>gi|169171558 PREDICTED: hypothetical protein [Homo sapiens]
Length = 303
Score = 37.4 bits (85), Expect = 0.006
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 12/80 (15%)
Query: 67 RAAAGPLARDTLSPEPAAREAPLLLPSWVQELWET-----RRRSSQAGIPVRAPRSPRAP 121
+ AGP AR P A +AP+++ W Q+ T ++ A +P+ P SP +P
Sbjct: 106 QVTAGPPAR------PLASQAPIVIKRWFQQFHLTHMAPPHQKEGSAAVPLLCPVSPHSP 159
Query: 122 EPALEPESLDFSGAGQRLRR 141
L L S GQ LRR
Sbjct: 160 ANFLPGRGLSVSD-GQYLRR 178
>gi|71979665 growth factor receptor-bound protein 7 [Homo sapiens]
Length = 532
Score = 35.0 bits (79), Expect = 0.030
Identities = 31/80 (38%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 72 PLARDTLSPEPAAREAPLLLPSWVQELWETRRR-SSQAGIPVRAPR--SPRAPEPALEPE 128
P DT PE R PLL+P+ ++L E RR +S IP P SP + P L
Sbjct: 28 PRPPDTPLPEEVKRSQPLLIPTTGRKLREEERRATSLPSIPNPFPELCSPPSQSPILGGP 87
Query: 129 SLDFSGAGQRLRRDVSRPAV 148
S A L RD SRP V
Sbjct: 88 ----SSARGLLPRDASRPHV 103
>gi|71979667 growth factor receptor-bound protein 7 [Homo sapiens]
Length = 532
Score = 35.0 bits (79), Expect = 0.030
Identities = 31/80 (38%), Positives = 37/80 (46%), Gaps = 7/80 (8%)
Query: 72 PLARDTLSPEPAAREAPLLLPSWVQELWETRRR-SSQAGIPVRAPR--SPRAPEPALEPE 128
P DT PE R PLL+P+ ++L E RR +S IP P SP + P L
Sbjct: 28 PRPPDTPLPEEVKRSQPLLIPTTGRKLREEERRATSLPSIPNPFPELCSPPSQSPILGGP 87
Query: 129 SLDFSGAGQRLRRDVSRPAV 148
S A L RD SRP V
Sbjct: 88 ----SSARGLLPRDASRPHV 103
>gi|239755509 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 34.3 bits (77), Expect = 0.050
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 10/59 (16%)
Query: 104 RSSQAGIPVRAPRSPRAPEPALEPESLDFSGAGQRLRRDVSR-----PAVDPAANRLGL 157
R S + +P+ +PR PRAP P L P + LR++V R P PAA L L
Sbjct: 16 RCSPSALPLTSPRRPRAPPPTLAPHL-----RPRHLRKEVERGGPLGPVRVPAARALAL 69
>gi|239750019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 34.3 bits (77), Expect = 0.050
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 10/59 (16%)
Query: 104 RSSQAGIPVRAPRSPRAPEPALEPESLDFSGAGQRLRRDVSR-----PAVDPAANRLGL 157
R S + +P+ +PR PRAP P L P + LR++V R P PAA L L
Sbjct: 16 RCSPSALPLTSPRRPRAPPPTLAPHL-----RPRHLRKEVERGGPLGPVRVPAARALAL 69
>gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo
sapiens]
Length = 344
Score = 34.3 bits (77), Expect = 0.050
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 10/59 (16%)
Query: 104 RSSQAGIPVRAPRSPRAPEPALEPESLDFSGAGQRLRRDVSR-----PAVDPAANRLGL 157
R S + +P+ +PR PRAP P L P + LR++V R P PAA L L
Sbjct: 16 RCSPSALPLTSPRRPRAPPPTLAPHL-----RPRHLRKEVERGGPLGPVRVPAARALAL 69
>gi|239752942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 33.5 bits (75), Expect = 0.086
Identities = 38/140 (27%), Positives = 48/140 (34%), Gaps = 8/140 (5%)
Query: 24 LLLPLP-----SGAWYKHVASPRYHTVGRAAGLLMGLRRSPYLWRRALRAAAGPLARDTL 78
+LL +P +G H+ PR R LL G RR +L+R P
Sbjct: 23 ILLAVPGRGKGTGKKATHLRRPRIKAWKRLRLLLSGARRLTWLYRVPRERVLEPENVGCS 82
Query: 79 SPEPAAREA-PLLLPSWVQELWETRRRSSQAGIPVRAPRSPRAPEPALEPESLDFSGAGQ 137
P PA A P PSW+ W RR G P PE G +
Sbjct: 83 QPSPALPCALPGPTPSWL--TWLHRRLHHAPGAAPALPGDEVLPERLQPVRHQGVEGRAE 140
Query: 138 RLRRDVSRPAVDPAANRLGL 157
+ V PA +LGL
Sbjct: 141 GGQHQVPHIRAQPAITQLGL 160
>gi|239747476 PREDICTED: hypothetical protein XP_002347543 [Homo
sapiens]
Length = 278
Score = 33.5 bits (75), Expect = 0.086
Identities = 38/140 (27%), Positives = 48/140 (34%), Gaps = 8/140 (5%)
Query: 24 LLLPLP-----SGAWYKHVASPRYHTVGRAAGLLMGLRRSPYLWRRALRAAAGPLARDTL 78
+LL +P +G H+ PR R LL G RR +L+R P
Sbjct: 23 ILLAVPGRGKGTGKKATHLRRPRIKAWKRLRLLLSGARRLTWLYRVPRERVLEPENVGCS 82
Query: 79 SPEPAAREA-PLLLPSWVQELWETRRRSSQAGIPVRAPRSPRAPEPALEPESLDFSGAGQ 137
P PA A P PSW+ W RR G P PE G +
Sbjct: 83 QPSPALPCALPGPTPSWL--TWLHRRLHHAPGAAPALPGDEVLPERLQPVRHQGVEGRAE 140
Query: 138 RLRRDVSRPAVDPAANRLGL 157
+ V PA +LGL
Sbjct: 141 GGQHQVPHIRAQPAITQLGL 160
>gi|239741348 PREDICTED: hypothetical protein XP_002342180 [Homo
sapiens]
Length = 278
Score = 33.5 bits (75), Expect = 0.086
Identities = 38/140 (27%), Positives = 48/140 (34%), Gaps = 8/140 (5%)
Query: 24 LLLPLP-----SGAWYKHVASPRYHTVGRAAGLLMGLRRSPYLWRRALRAAAGPLARDTL 78
+LL +P +G H+ PR R LL G RR +L+R P
Sbjct: 23 ILLAVPGRGKGTGKKATHLRRPRIKAWKRLRLLLSGARRLTWLYRVPRERVLEPENVGCS 82
Query: 79 SPEPAAREA-PLLLPSWVQELWETRRRSSQAGIPVRAPRSPRAPEPALEPESLDFSGAGQ 137
P PA A P PSW+ W RR G P PE G +
Sbjct: 83 QPSPALPCALPGPTPSWL--TWLHRRLHHAPGAAPALPGDEVLPERLQPVRHQGVEGRAE 140
Query: 138 RLRRDVSRPAVDPAANRLGL 157
+ V PA +LGL
Sbjct: 141 GGQHQVPHIRAQPAITQLGL 160
>gi|68989256 ras inhibitor RIN1 [Homo sapiens]
Length = 783
Score = 33.5 bits (75), Expect = 0.086
Identities = 42/127 (33%), Positives = 54/127 (42%), Gaps = 25/127 (19%)
Query: 5 PGERGAPASRPRLALLLLLLLLPLPSGAWYKHVASPRYHTVGRAAGLLMGLRRSPYLWRR 64
PG RG+PA+ P L LL S A+ +A R VGRAA LM R +
Sbjct: 328 PGSRGSPATSPHLG--RRRPLLRSMSAAFCSLLAPER--QVGRAAAALMQDRHT------ 377
Query: 65 ALRAAAGPLARDTLSPEPAAREAPLLLPSWVQELWETRRRSSQAGIPVRAPRSPRAPEPA 124
AAG L +D L+ A E QEL R+ S+A + A PE
Sbjct: 378 ----AAGQLVQDLLTQVRAGPEP--------QELQGIRQALSRARAMLSA---ELGPEKL 422
Query: 125 LEPESLD 131
L P+ L+
Sbjct: 423 LSPKRLE 429
>gi|4826908 phosphoinositide-3-kinase, regulatory subunit 2 (beta)
[Homo sapiens]
Length = 728
Score = 33.1 bits (74), Expect = 0.11
Identities = 27/71 (38%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
Query: 63 RRALRAAAGPLARDTLSPEPAAREAPLLLPSWVQELWETRRRSSQAGIPVRA------PR 116
RRALR AAGP+ L P L L +Q L RR+ G VRA P
Sbjct: 195 RRALREAAGPVG-PALEPPTLPLHRALTLRFLLQHLGRVARRAPALGPAVRALGATFGPL 253
Query: 117 SPRAPEPALEP 127
RAP P P
Sbjct: 254 LLRAPPPPSSP 264
>gi|239754042 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 33.1 bits (74), Expect = 0.11
Identities = 38/113 (33%), Positives = 44/113 (38%), Gaps = 10/113 (8%)
Query: 57 RSPYLWRRALRAAAGPLARDTLSPEPAAREA--PLLLPSWVQELWETRRRSSQAGIPVRA 114
R+ L R A AA G A PEP R P LP+ + RS +A +P
Sbjct: 183 RAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTE 242
Query: 115 PRSPRAPEPALEPESLDFSGAGQRL----RRDVSR--PAVDPAANRLGLPCLA 161
SPR P PE QRL R SR PA+ P PCLA
Sbjct: 243 FLSPRRTRPRKHPERT--RRPAQRLESGCRGHCSRGAPALAPPKLSPPFPCLA 293
>gi|239748572 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 33.1 bits (74), Expect = 0.11
Identities = 38/113 (33%), Positives = 44/113 (38%), Gaps = 10/113 (8%)
Query: 57 RSPYLWRRALRAAAGPLARDTLSPEPAAREA--PLLLPSWVQELWETRRRSSQAGIPVRA 114
R+ L R A AA G A PEP R P LP+ + RS +A +P
Sbjct: 183 RAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTE 242
Query: 115 PRSPRAPEPALEPESLDFSGAGQRL----RRDVSR--PAVDPAANRLGLPCLA 161
SPR P PE QRL R SR PA+ P PCLA
Sbjct: 243 FLSPRRTRPRKHPERT--RRPAQRLESGCRGHCSRGAPALAPPKLSPPFPCLA 293
>gi|169167670 PREDICTED: similar to hCG1646049 [Homo sapiens]
Length = 346
Score = 33.1 bits (74), Expect = 0.11
Identities = 38/113 (33%), Positives = 44/113 (38%), Gaps = 10/113 (8%)
Query: 57 RSPYLWRRALRAAAGPLARDTLSPEPAAREA--PLLLPSWVQELWETRRRSSQAGIPVRA 114
R+ L R A AA G A PEP R P LP+ + RS +A +P
Sbjct: 183 RAAQLLREAAAAAQGLRAPAARLPEPTRRAPGRPGCLPTAAAAAADALWRSRRAPLPPTE 242
Query: 115 PRSPRAPEPALEPESLDFSGAGQRL----RRDVSR--PAVDPAANRLGLPCLA 161
SPR P PE QRL R SR PA+ P PCLA
Sbjct: 243 FLSPRRTRPRKHPERT--RRPAQRLESGCRGHCSRGAPALAPPKLSPPFPCLA 293
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 32.7 bits (73), Expect = 0.15
Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 20/67 (29%)
Query: 74 ARDTLSPEPAAR-------EAPLLLPSWVQELWETRRRSSQAGIPVRAPRSPRAPEPALE 126
AR LSPE A E P++LP +Q P+ PR PR P P E
Sbjct: 1250 ARPPLSPERAPEHDLEVEPEPPMMLPLPLQP-------------PLPPPRPPRPPSPPPE 1296
Query: 127 PESLDFS 133
PE+ D S
Sbjct: 1297 PETTDAS 1303
>gi|61966761 leucine rich repeat containing 26 [Homo sapiens]
Length = 334
Score = 32.0 bits (71), Expect = 0.25
Identities = 19/33 (57%), Positives = 19/33 (57%)
Query: 8 RGAPASRPRLALLLLLLLLPLPSGAWYKHVASP 40
RG SRPR LLLLLLL P P A ASP
Sbjct: 2 RGPSWSRPRPLLLLLLLLSPWPVWAQVSATASP 34
>gi|56118234 proline rich 6 [Homo sapiens]
Length = 272
Score = 32.0 bits (71), Expect = 0.25
Identities = 26/70 (37%), Positives = 33/70 (47%), Gaps = 7/70 (10%)
Query: 63 RRALRAAAGPLA---RDTLSPEPAAREAPLLLPSWVQELWETRRRSSQAGIPVRAPRSPR 119
RR+ +AA L R S PAA A L PS + TRR +SQAG +A P
Sbjct: 2 RRSRSSAAAKLRGQKRSGASAAPAASAAAALAPSATR----TRRSASQAGSKSQAVEKPP 57
Query: 120 APEPALEPES 129
+ +P L S
Sbjct: 58 SEKPRLRRSS 67
>gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1366
Score = 31.6 bits (70), Expect = 0.33
Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 31/113 (27%)
Query: 68 AAAGPLARDTLSPEPAAREAPLLLPSWVQELWETRRRSS--QAGIPVR-----APRSPR- 119
AAA P TLSP PA + P P +L +R S QAG R PR PR
Sbjct: 14 AAAAPGQEPTLSPIPA--DGPWSGP----DLSSEKRGGSHGQAGRDARLRFRNVPRQPRR 67
Query: 120 -----APEPALEPESLDFSGA------------GQRLRRDVSRPAVDPAANRL 155
APEP L+ S + + G+RLR + + VD A +R+
Sbjct: 68 TRKPAAPEPELQSPSAGHASSRAPSGVRAGAELGRRLRVSLLKAVVDRAGSRI 120
>gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1139
Score = 31.6 bits (70), Expect = 0.33
Identities = 37/113 (32%), Positives = 48/113 (42%), Gaps = 31/113 (27%)
Query: 68 AAAGPLARDTLSPEPAAREAPLLLPSWVQELWETRRRSS--QAGIPVR-----APRSPR- 119
AAA P TLSP PA + P P +L +R S QAG R PR PR
Sbjct: 14 AAAAPGQEPTLSPIPA--DGPWSGP----DLSSEKRGGSHGQAGRDARLRFRNVPRQPRR 67
Query: 120 -----APEPALEPESLDFSGA------------GQRLRRDVSRPAVDPAANRL 155
APEP L+ S + + G+RLR + + VD A +R+
Sbjct: 68 TRKPAAPEPELQSPSAGHASSRAPSGVRAGAELGRRLRVSLLKAVVDRAGSRI 120
>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
isoform a [Homo sapiens]
Length = 1749
Score = 31.6 bits (70), Expect = 0.33
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Query: 111 PVRAPRSPRAPEPALEPESLDFSGAGQRLRRDVSRPAVD----PAANRLGLPCLAPGP 164
P + PRS P EPE + AG+ R D S +V PA RL LPC+ P
Sbjct: 828 PPKPPRSKATERPGQEPEGPGATPAGE--RDDQSPDSVPERPRPADRRLCLPCVDASP 883
>gi|169167742 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]
Length = 494
Score = 31.2 bits (69), Expect = 0.43
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 67 RAAAGPLARDTLSPEPAAREAPLLLPSWVQELWETRRRSSQAGIPVRAPRSPRAPEPALE 126
RA P PA R+A LL L RRRS + G+ V R +AP P +
Sbjct: 384 RAGLPPALGSRGPAAPAPRKASLL------PLQRLRRRSVRPGVVVPRVRVSKAPAPTFQ 437
Query: 127 PE 128
PE
Sbjct: 438 PE 439
>gi|113416996 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]
Length = 1006
Score = 31.2 bits (69), Expect = 0.43
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 67 RAAAGPLARDTLSPEPAAREAPLLLPSWVQELWETRRRSSQAGIPVRAPRSPRAPEPALE 126
RA P PA R+A LL L RRRS + G+ V R +AP P +
Sbjct: 896 RAGLPPALGSRGPAAPAPRKASLL------PLQRLRRRSVRPGVVVPRVRVSKAPAPTFQ 949
Query: 127 PE 128
PE
Sbjct: 950 PE 951
>gi|239742483 PREDICTED: ankyrin repeat domain 33B [Homo sapiens]
Length = 494
Score = 31.2 bits (69), Expect = 0.43
Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 6/62 (9%)
Query: 67 RAAAGPLARDTLSPEPAAREAPLLLPSWVQELWETRRRSSQAGIPVRAPRSPRAPEPALE 126
RA P PA R+A LL L RRRS + G+ V R +AP P +
Sbjct: 384 RAGLPPALGSRGPAAPAPRKASLL------PLQRLRRRSVRPGVVVPRVRVSKAPAPTFQ 437
Query: 127 PE 128
PE
Sbjct: 438 PE 439
>gi|151101449 solute carrier family 4, sodium bicarbonate
cotransporter, member 9 [Homo sapiens]
Length = 959
Score = 30.8 bits (68), Expect = 0.56
Identities = 36/119 (30%), Positives = 48/119 (40%), Gaps = 17/119 (14%)
Query: 42 YHTVGRAAGLLMGLRRSPYLWRRA------LRAAAGPLARDTLSP----EPAAR-EAPLL 90
YH +GRAA +L+ + + RRA L A L T+ P +P AR P
Sbjct: 255 YHEMGRAAAVLLSDPQFQWSVRRASNLHDLLAALDAFLEEVTVLPPGRWDPTARIPPPKC 314
Query: 91 LPSWVQELWETRRRSSQAGIP------VRAPRSPRAPEPALEPESLDFSGAGQRLRRDV 143
LPS + L +R +P R P A P L+ F G Q +RR V
Sbjct: 315 LPSQHKRLPSQQREIRGPAVPRLTSAEDRHRHGPHAHSPELQRTGRLFGGLIQDVRRKV 373
>gi|194353976 transcription factor AP-2 epsilon (activating enhancer
binding protein 2 epsilon) [Homo sapiens]
Length = 442
Score = 30.8 bits (68), Expect = 0.56
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 78 LSPEPAAREAPLLLPSWVQELWETRRRSSQAGIPVRAPRSPRAPEPALEPESLDFSGAGQ 137
L+ +P APL P Q W R +++A +P A L+P D++ A
Sbjct: 79 LAGDPYGGLAPLAQPQPPQAAWAAPRAAARAHEEPPGLLAPPARALGLDPRR-DYATAVP 137
Query: 138 RLRRDVSRPAVDPAANRLGLPCLAPGP 164
RL ++ A A LGLP LA P
Sbjct: 138 RLLHGLADGAHGLADAPLGLPGLAAAP 164
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.137 0.439
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,288,646
Number of Sequences: 37866
Number of extensions: 451309
Number of successful extensions: 2405
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 104
Number of HSP's that attempted gapping in prelim test: 2328
Number of HSP's gapped (non-prelim): 175
length of query: 165
length of database: 18,247,518
effective HSP length: 94
effective length of query: 71
effective length of database: 14,688,114
effective search space: 1042856094
effective search space used: 1042856094
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.