Guide to the Human Genome
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Name: NPB Sequence: fasta or formatted (125aa) NCBI GI: 22507403
Description:

preproneuropeptide B

Referenced in:

Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            19.2         24           4
 C cysteine            4.0          5           1
 D aspartate           2.4          3           1
 E glutamate           2.4          3           1
 F phenylalanine       0.8          1           1
 G glycine             8.8         11           2
 H histidine           1.6          2           1
 I isoleucine          0.0          0           0
 K lysine              1.6          2           1
 L leucine            15.2         19           3
 M methionine          0.8          1           1
 N asparagine          1.6          2           1
 P proline             8.8         11           2
 Q glutamine           4.0          5           1
 R arginine           10.4         13           2
 S serine              8.0         10           2
 T threonine           1.6          2           1
 V valine              4.0          5           1
 W tryptophan          0.8          1           1
 Y tyrosine            4.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   preproneuropeptide B 
NPW                   0.127   neuropeptide W preproprotein 
SIAH2                 0.035   seven in absentia homolog 2 
LOC100134409          0.031   PREDICTED: similar to facioscapulohumeral muscular ...
LOC100128943          0.022   PREDICTED: similar to hCG2038853 
LOC100128943          0.022   PREDICTED: similar to hCG2038853 
LOC100128943          0.022   PREDICTED: similar to hCG2038853 
IRX3                  0.017   iroquois homeobox 3 
LOC147646             0.017   PREDICTED: hypothetical protein 
LOC100293327          0.017   PREDICTED: hypothetical protein 
LOC147646             0.017   PREDICTED: hypothetical protein 
LOC100291252          0.017   PREDICTED: hypothetical protein XP_002347634 
LOC147646             0.017   PREDICTED: hypothetical protein 
LOC100287254          0.017   PREDICTED: hypothetical protein XP_002343484 
CABLES1               0.017   Cdk5 and Abl enzyme substrate 1 isoform 2 
SNIP                  0.017   SNAP25-interacting protein 
LOC652586             0.013   PREDICTED: similar to facioscapulohumeral muscular ...
LOC729370             0.013   PREDICTED: hypothetical protein 
SLC27A5               0.013   solute carrier family 27 (fatty acid transporter), m...
ONECUT3               0.013   one cut homeobox 3 
LHFPL2                0.013   lipoma HMGIC fusion partner-like 2 
LOC100292370          0.013   PREDICTED: hypothetical protein 
OLIG1                 0.013   oligodendrocyte transcription factor 1 
LOC100130503          0.013   PREDICTED: hypothetical protein 
LOC100130503          0.013   PREDICTED: hypothetical protein 
LOC440017             0.013   PREDICTED: similar to double homeobox, 4 
LOC728022             0.013   PREDICTED: similar to double homeobox, 4 
LOC100289581          0.013   PREDICTED: hypothetical protein XP_002343082 
LOC440014             0.013   PREDICTED: similar to double homeobox, 4 
LOC399839             0.013   PREDICTED: similar to double homeobox, 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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