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Search of human proteins with 153251792
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|153251792 hypothetical protein LOC54854 [Homo sapiens]
(478 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|153251792 hypothetical protein LOC54854 [Homo sapiens] 974 0.0
gi|115392150 hypothetical protein LOC644815 [Homo sapiens] 212 5e-55
gi|156564372 hypothetical protein LOC113828 [Homo sapiens] 211 2e-54
gi|116235448 hypothetical protein LOC81610 [Homo sapiens] 201 1e-51
gi|157311635 FAM83H [Homo sapiens] 184 2e-46
gi|30425394 hypothetical protein LOC128876 [Homo sapiens] 171 1e-42
gi|61676089 hypothetical protein LOC222584 [Homo sapiens] 167 1e-41
gi|40254997 hypothetical protein LOC84985 isoform a [Homo sapiens] 145 8e-35
gi|46255017 hypothetical protein LOC84985 isoform b [Homo sapiens] 142 7e-34
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens] 47 3e-05
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ... 47 3e-05
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 43 7e-04
gi|57242766 hypothetical protein LOC168455 [Homo sapiens] 42 0.001
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 42 0.002
gi|62945417 dystrophia myotonica-containing WD repeat motif prot... 42 0.002
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 42 0.002
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 41 0.003
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 40 0.005
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 40 0.006
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 40 0.006
gi|55741677 SET domain containing 1A [Homo sapiens] 40 0.006
gi|118402590 myosin XV [Homo sapiens] 39 0.014
gi|239747677 PREDICTED: hypothetical protein [Homo sapiens] 39 0.014
gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo ... 39 0.014
gi|52485606 formin-like 2 [Homo sapiens] 39 0.014
gi|45827729 scribble isoform b [Homo sapiens] 38 0.023
gi|45827731 scribble isoform a [Homo sapiens] 38 0.023
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 37 0.030
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 37 0.030
gi|26051204 calcium/calmodulin-dependent protein kinase II beta ... 37 0.030
>gi|153251792 hypothetical protein LOC54854 [Homo sapiens]
Length = 478
Score = 974 bits (2517), Expect = 0.0
Identities = 478/478 (100%), Positives = 478/478 (100%)
Query: 1 MAASQLAALEGVDSGPRVPGASPGFLYSEGQRLALEALLSKGAEAFQTCVQREELWPFLS 60
MAASQLAALEGVDSGPRVPGASPGFLYSEGQRLALEALLSKGAEAFQTCVQREELWPFLS
Sbjct: 1 MAASQLAALEGVDSGPRVPGASPGFLYSEGQRLALEALLSKGAEAFQTCVQREELWPFLS 60
Query: 61 ADEVQGLAAAAEDWTVAKQEPSGMAEGATTTDVDAGSLSYWPGQSEQPAPVLRLGWPVDS 120
ADEVQGLAAAAEDWTVAKQEPSGMAEGATTTDVDAGSLSYWPGQSEQPAPVLRLGWPVDS
Sbjct: 61 ADEVQGLAAAAEDWTVAKQEPSGMAEGATTTDVDAGSLSYWPGQSEQPAPVLRLGWPVDS 120
Query: 121 AWKGITRAQLYTQPPGEGQPPLKELVRLEIQAAHKLVAVVMDVFTDPDLLLDLVDAATRR 180
AWKGITRAQLYTQPPGEGQPPLKELVRLEIQAAHKLVAVVMDVFTDPDLLLDLVDAATRR
Sbjct: 121 AWKGITRAQLYTQPPGEGQPPLKELVRLEIQAAHKLVAVVMDVFTDPDLLLDLVDAATRR 180
Query: 181 WVPVYLLLDRQQLPAFLELAQQLGVNPWNTENVDVRVVRGCSFQSRWRRQVSGTVREKFV 240
WVPVYLLLDRQQLPAFLELAQQLGVNPWNTENVDVRVVRGCSFQSRWRRQVSGTVREKFV
Sbjct: 181 WVPVYLLLDRQQLPAFLELAQQLGVNPWNTENVDVRVVRGCSFQSRWRRQVSGTVREKFV 240
Query: 241 LLDGERVISGSYSFTWSDARLHRGLVTLLTGEIVDAFSLEFRTLYAASCPLPPAPPQKPS 300
LLDGERVISGSYSFTWSDARLHRGLVTLLTGEIVDAFSLEFRTLYAASCPLPPAPPQKPS
Sbjct: 241 LLDGERVISGSYSFTWSDARLHRGLVTLLTGEIVDAFSLEFRTLYAASCPLPPAPPQKPS 300
Query: 301 VIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSPATPGPALSDILRSVQRA 360
VIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSPATPGPALSDILRSVQRA
Sbjct: 301 VIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSPATPGPALSDILRSVQRA 360
Query: 361 RTPSGPPARPSRSMWDLSRLSQLSGSSDGDNELKKSWGSKDTPAKALMRQRGTGGGPWGE 420
RTPSGPPARPSRSMWDLSRLSQLSGSSDGDNELKKSWGSKDTPAKALMRQRGTGGGPWGE
Sbjct: 361 RTPSGPPARPSRSMWDLSRLSQLSGSSDGDNELKKSWGSKDTPAKALMRQRGTGGGPWGE 420
Query: 421 VDSRPPWGGALPLPPAHRLRYLSPARRRFGGDATFKLQEPRGVRPSDWAPRAGLGGQP 478
VDSRPPWGGALPLPPAHRLRYLSPARRRFGGDATFKLQEPRGVRPSDWAPRAGLGGQP
Sbjct: 421 VDSRPPWGGALPLPPAHRLRYLSPARRRFGGDATFKLQEPRGVRPSDWAPRAGLGGQP 478
>gi|115392150 hypothetical protein LOC644815 [Homo sapiens]
Length = 823
Score = 212 bits (540), Expect = 5e-55
Identities = 120/328 (36%), Positives = 187/328 (57%), Gaps = 26/328 (7%)
Query: 1 MAASQLAALEGVDSGPRVPGASPGFLYSEGQRLALEALLSKGAEAFQTCVQREELWPFLS 60
MA SQ+ L+ R + P F YSE QRLALEAL+++G +AF ++RE + FLS
Sbjct: 1 MAFSQVQCLDDNHVNWRSSESKPEFFYSEEQRLALEALVARGRDAFYEVLKRENIRDFLS 60
Query: 61 ADEVQGLAAAAEDWTVAKQEPSGM----------------AEGATTTDVDAG---SLSYW 101
E++ + E + ++P G A GA ++A SL YW
Sbjct: 61 ELELKRILETIEVYDPGSEDPRGTGPSQGPEDNGVGDGEEASGADGVPIEAEPLPSLEYW 120
Query: 102 PGQSEQPAPVLRLGWPVDSAWKGITRAQLYTQPPGEGQPPLKELVRLEIQAAHKLVAVVM 161
P +S++ P L LGWP A++G+TRA +Y QPP +GQ +KE+VR I A K++AVVM
Sbjct: 121 PQKSDRSIPQLDLGWPDTIAYRGVTRASVYMQPPIDGQAHIKEVVRKMISQAQKVIAVVM 180
Query: 162 DVFTDPDLLLDLVDAATRRWVPVYLLLDRQQLPAFLELAQQLGVNPWNTENVDVRVVRGC 221
D+FTD D+ DL+DA +R V VY+++D + FL + ++ ++ + +N+ VR G
Sbjct: 181 DMFTDVDIFKDLLDAGFKRKVAVYIIVDESNVKYFLHMCERACMHLGHLKNLRVRSSGGT 240
Query: 222 SFQSRWRRQVSGTVREKFVLLDGERVISGSYSFTWSDARLHRGLVTLLTGEIVDAFSLEF 281
F +R + G + +KF+ +DG+R + GSYSFTWS AR R ++++L+G++V+ F +F
Sbjct: 241 EFFTRSATKFKGALAQKFMFVDGDRAVCGSYSFTWSAARTDRNVISVLSGQVVEMFDRQF 300
Query: 282 RTLYAAS-------CPLPPAPPQKPSVI 302
+ LY S P+ P +P V+
Sbjct: 301 QELYLMSHSVSLKGIPMEKEPEPEPIVL 328
>gi|156564372 hypothetical protein LOC113828 [Homo sapiens]
Length = 500
Score = 211 bits (536), Expect = 2e-54
Identities = 121/296 (40%), Positives = 174/296 (58%), Gaps = 9/296 (3%)
Query: 1 MAASQLAALEGVDSGPRVPGASPGFLYSEGQRLALEALLSKGAEAFQTCVQREELWPFLS 60
MA SQL L+ +V A F Y E +R ALEALL G +A++ ++ E+L FLS
Sbjct: 1 MAESQLNCLDEAHVNEKVTEAQAAFYYCERRRAALEALLGGGEQAYRERLKEEQLRDFLS 60
Query: 61 ADEVQGLAAAAEDW------TVAKQEPSGMAEGATTTDVDAG-SLSYWPGQSEQPAPVLR 113
+ E Q L AA + A+ + A+ ++G SL+YWP +S+ P L
Sbjct: 61 SPERQALRAAWSPYEDAVPAANARGKSKAKAKAPAPAPAESGESLAYWPDRSDTEVPPLD 120
Query: 114 LGWPVDSAWKGITRAQLYTQPP-GEGQPPLKELVRLEIQAAHKLVAVVMDVFTDPDLLLD 172
LGW ++G++R L+T PP E P LK++VR IQ A K++AVVMD+FTD D+ D
Sbjct: 121 LGWTDTGFYRGVSRVTLFTHPPKDEKAPHLKQVVRQMIQQAQKVIAVVMDLFTDGDIFQD 180
Query: 173 LVDAATRRWVPVYLLLDRQQLPAFLELAQQLGVNPWNTENVDVRVVRGCSFQSRWRRQVS 232
+VDAA +R VPVY++LD + FLE+ Q L + + N+ VR V G F R +
Sbjct: 181 IVDAACKRRVPVYIILDEAGVKYFLEMCQDLQLTDFRIRNIRVRSVTGVGFYMPMGR-IK 239
Query: 233 GTVREKFVLLDGERVISGSYSFTWSDARLHRGLVTLLTGEIVDAFSLEFRTLYAAS 288
GT+ +F+++DG++V +GSY FTWS + + R L+ LLTG+ V+ F EFR LYA S
Sbjct: 240 GTLSSRFLMVDGDKVATGSYRFTWSSSHVDRNLLLLLTGQNVEPFDTEFRELYAIS 295
>gi|116235448 hypothetical protein LOC81610 [Homo sapiens]
Length = 615
Score = 201 bits (511), Expect = 1e-51
Identities = 118/302 (39%), Positives = 178/302 (58%), Gaps = 10/302 (3%)
Query: 2 AASQLAALEGVDSGPRV-----PGASPGFLYSEGQRLALEALLSKGAEAFQTCVQREELW 56
+A+ EG+D P +P L+SE +RLALE L++ G EAF ++RE L
Sbjct: 28 SAAMALLSEGLDEVPAACLSPCGPPNPTELFSESRRLALEELVAGGPEAFAAFLRRERLA 87
Query: 57 PFLSADEVQGLAAAAEDWTVAKQEPSGMAEGATTTDVDAGSLSYWPGQSEQPAPVLRLGW 116
FL+ DEV + AAE + AE + + D S +Y+P QS+ P+L LGW
Sbjct: 88 RFLNPDEVHAILRAAERPGEEGAAAAAAAEDSFGSSHDCSSGTYFPEQSDLEPPLLELGW 147
Query: 117 PV--DSAWKGITRAQLYTQP--PGEGQP-PLKELVRLEIQAAHKLVAVVMDVFTDPDLLL 171
P A++G TR + + QP GEG P K+ +R ++++A +++AVVMDVFTD D+
Sbjct: 148 PAFYQGAYRGATRVETHFQPRGAGEGGPYGCKDALRQQLRSAREVIAVVMDVFTDIDIFR 207
Query: 172 DLVDAATRRWVPVYLLLDRQQLPAFLELAQQLGVNPWNTENVDVRVVRGCSFQSRWRRQV 231
DL + ++ V VY+LLD+ L FL++ L V+P + + VR + G + +R ++
Sbjct: 208 DLQEICRKQGVAVYILLDQALLSQFLDMCMDLKVHPEQEKLMTVRTITGNIYYARSGTKI 267
Query: 232 SGTVREKFVLLDGERVISGSYSFTWSDARLHRGLVTLLTGEIVDAFSLEFRTLYAASCPL 291
G V EKF L+DG RV +GSYSFTW+D +L+ + +L+G++V+ F LEFR LYA S P+
Sbjct: 268 IGKVHEKFTLIDGIRVATGSYSFTWTDGKLNSSNLVILSGQVVEHFDLEFRILYAQSKPI 327
Query: 292 PP 293
P
Sbjct: 328 SP 329
>gi|157311635 FAM83H [Homo sapiens]
Length = 1179
Score = 184 bits (466), Expect = 2e-46
Identities = 110/277 (39%), Positives = 162/277 (58%), Gaps = 9/277 (3%)
Query: 22 SPGFL---YSEGQRLALEALLSKGAEAFQTCVQREELWPFLSADEVQGLAAAAEDWTVAK 78
+PG+L Y E RLA++AL G+EA+ + E FL +E++ ++
Sbjct: 16 APGYLPPHYKEYYRLAVDALAEGGSEAYSRFLATEGAPDFLCPEELEHVSRHLRPPQYVT 75
Query: 79 QEPSGMAEGATT-TDVDAGSLSYWPGQSEQPAPVLRLGWPVDSAWKGITRAQLYTQPPGE 137
+EP EG+ D+D S +YWP S+Q P L LGWP+ ++G T QPP
Sbjct: 76 REPP---EGSLLDVDMDGSSGTYWPVNSDQAVPELDLGWPLTFGFQG-TEVTTLVQPPPP 131
Query: 138 GQPPLKELVRLEIQAAHKLVAVVMDVFTDPDLLLDLVDAATRRWVPVYLLLDRQQLPAFL 197
P +K+ R I++A ++VAVVMD+FTD DLL ++++AA RR VPVY+LLD FL
Sbjct: 132 DSPSIKDEARRMIRSAQQVVAVVMDMFTDVDLLSEVLEAAARR-VPVYILLDEMNAQHFL 190
Query: 198 ELAQQLGVNPWNTENVDVRVVRGCSFQSRWRRQVSGTVREKFVLLDGERVISGSYSFTWS 257
++A + VN + + + VR V G ++ R + G V+EKF+L+D V+SGSYSF WS
Sbjct: 191 DMADKCRVNLHHVDFLRVRTVAGPTYYCRTGKSFKGHVKEKFLLVDCAVVMSGSYSFMWS 250
Query: 258 DARLHRGLVTLLTGEIVDAFSLEFRTLYAASCPLPPA 294
++HR L + GE+V +F EFR L+A S PL P+
Sbjct: 251 FEKIHRSLAHVFQGELVSSFDEEFRILFAQSEPLVPS 287
>gi|30425394 hypothetical protein LOC128876 [Homo sapiens]
Length = 747
Score = 171 bits (433), Expect = 1e-42
Identities = 118/329 (35%), Positives = 170/329 (51%), Gaps = 32/329 (9%)
Query: 27 YSEGQRLALEALLSKGAEAFQTCVQREELWPFLSADEVQGLAA----AAEDWTVAKQEPS 82
+SE RLA +ALL +G A+ + E PFLSA +V + + E QE S
Sbjct: 41 HSEAARLAADALLERGEAAYLRVISEERELPFLSALDVDYMTSHVRGGPELSEAQGQEAS 100
Query: 83 GMAEGATTTDVDAGSLSYWPGQSEQPAPVLRLGWPVDSAWKGITRAQLYTQPPGEGQPPL 142
G + ++V +G+ Y+P S+ P L LGWP G + Q + +
Sbjct: 101 GPDRLSLLSEVTSGT--YFPMASDIDPPDLDLGWPEVPQATGFSPTQAVVHFQRDKAKNI 158
Query: 143 KELVRLEIQAAHKLVAVVMDVFTDPDLLLDLVDAATRRWVPVYLLLDRQQLPAFLELAQQ 202
K+L+R AH +VAVVMD+FTD +LL DL++A++RR VPVYLLL ++ L FLE+ +
Sbjct: 159 KDLLRFLFSQAHTVVAVVMDIFTDMELLCDLMEASSRRGVPVYLLLAQEHLRHFLEMCYK 218
Query: 203 LGVNPWNTENVDVRVVRGCSFQSRWRRQVSGTVREKFVLLDGERVISGSYSFTWSDARLH 262
+ +N + N+ VR G ++ S+ R+ +G EKFVL+D E+V++GSYSFTW ++ H
Sbjct: 219 MDLNGEHLPNMRVRSTCGDTYCSKAGRRFTGQALEKFVLIDCEQVVAGSYSFTWLCSQAH 278
Query: 263 RGLVTLLTGEIVDAFSLEFRTLYAASCPLPPAPPQKPSVIGGLQRGRSPHRVSRRRSVAP 322
+V L G IV+ F EFR LYA S P + G G P ++P
Sbjct: 279 TSMVLQLRGRIVEDFDREFRCLYAESQP-----------VEGFCGGEDP--------LSP 319
Query: 323 ASPPPPDGPLAHRLAACRVSPATPGPALS 351
+ PP LA R P P P S
Sbjct: 320 RALRPPPVALAFR-------PDVPSPTSS 341
>gi|61676089 hypothetical protein LOC222584 [Homo sapiens]
Length = 1011
Score = 167 bits (424), Expect = 1e-41
Identities = 105/300 (35%), Positives = 164/300 (54%), Gaps = 11/300 (3%)
Query: 27 YSEGQRLALEALLSKGAEAFQTCVQREELWPFLSADEVQGLAAAAEDWTVAKQEPSGMAE 86
Y E R+A++ L+ G EA+Q + +E + FL+ +E+ + + VA+ G +
Sbjct: 24 YKEWYRVAIDILIEHGLEAYQEFLVQERVSDFLAEEEINYILKNVQK--VAQSTAHGTDD 81
Query: 87 GATTTDVDAGSLSYWPGQSEQPAPVLRLGWP-VDSAWKGITRAQLYTQPPGEGQPPLKEL 145
T S +YWP +S+ AP L LGWP V G T L PP +KE
Sbjct: 82 SCDDT---LSSGTYWPVESDVEAPNLDLGWPYVMPGLLGGTHIDLLFHPPRAHLLTIKET 138
Query: 146 VRLEIQAAHKLVAVVMDVFTDPDLLLDLVDAATRRWVPVYLLLDRQQLPAFLELAQQLGV 205
+R I+ A K++A+VMD+FTD D+ ++V+A+TR V VY+LLD FL + ++ G
Sbjct: 139 IRKMIKEARKVIALVMDIFTDVDIFKEIVEASTRG-VSVYILLDESNFNHFLNMTEKQGC 197
Query: 206 NPWNTENVDVRVVRGCSFQSRWRRQVSGTVREKFVLLDGERVISGSYSFTWSDARLHRGL 265
+ N+ VR V+G + S+ + G + +KF+L+D ++V+ GSYS+ WS + H +
Sbjct: 198 SVQRLRNIRVRTVKGQDYLSKTGAKFHGKMEQKFLLVDCQKVMYGSYSYMWSFEKAHLSM 257
Query: 266 VTLLTGEIVDAFSLEFRTLYAASC-PLPPAPPQKPSVIGG---LQRGRSPHRVSRRRSVA 321
V ++TG++V++F EFRTLYA SC P A + V G + G H VS SV+
Sbjct: 258 VQIITGQLVESFDEEFRTLYARSCVPSSFAQEESARVKHGKALWENGTYQHSVSSLASVS 317
>gi|40254997 hypothetical protein LOC84985 isoform a [Homo sapiens]
Length = 434
Score = 145 bits (366), Expect = 8e-35
Identities = 107/358 (29%), Positives = 173/358 (48%), Gaps = 9/358 (2%)
Query: 21 ASPGFLYSEGQRLALEALLSKGAEAFQTCVQREELWPFLSADEVQGLAAAAEDWTVAKQE 80
A F +E RLA +ALL G+EA+ + +E FLS+ E Q + A A +
Sbjct: 25 ARADFSDNESARLATDALLDGGSEAYWRVLSQEGEVDFLSSVEAQYIQAQAREPPCPPDT 84
Query: 81 PSGMAEGATTTDVDA-GSLSYWPGQSEQPAPVLRLGWPVDSA--WKGITRAQLYTQPPGE 137
G G D + S +Y+P SE P L W K + A +Y Q
Sbjct: 85 LGGAEAGPKGLDSSSLQSGTYFPVASEGSEPALLHSWASAEKPYLKEKSSATVYFQTVKH 144
Query: 138 GQPPLKELVRLEIQAAHKLVAVVMDVFTDPDLLLDLVDAATRRWVPVYLLLDRQQLPAFL 197
+++LVR I +++ ++MDVFTD ++ D+++AA +R V V +LLD+ + F
Sbjct: 145 NN--IRDLVRRCITRTSQVLVILMDVFTDVEIFCDILEAANKRGVFVCVLLDQGGVKLFQ 202
Query: 198 ELAQQLGVNPWNTENVDVRVVRGCSFQSRWRRQVSGTVREKFVLLDGERVISGSYSFTWS 257
E+ ++ ++ + +N+ +R V G + ++ R+ +G +REKF++ D V+SGSYSFTW
Sbjct: 203 EMCDKVQISDSHLKNISIRSVEGEIYCAKSGRKFAGQIREKFIISDWRFVLSGSYSFTWL 262
Query: 258 DARLHRGLVTLLTGEIVDAFSLEFRTLYAASCPLPPAPPQKPSVIGGLQRGRSPHRVSRR 317
+HR +++ TG+ V+ F EFR LYA+S P+ + P ++ + G +P
Sbjct: 263 CGHVHRNILSKFTGQAVELFDEEFRHLYASSKPVMGL--KSPRLVAPVPPGAAPANGRLS 320
Query: 318 RSVAPASPPPPDGPLAHRLAACRVSPATPGPALSDILRSVQRARTPSGPPARPSRSMW 375
S AS P + R A P T + S S P P +P + W
Sbjct: 321 SSSGSASDRTSSNPFSGRSAGSH--PGTRSVSASSGPCSPAAPHPPPPPRFQPHQGPW 376
>gi|46255017 hypothetical protein LOC84985 isoform b [Homo sapiens]
Length = 367
Score = 142 bits (358), Expect = 7e-34
Identities = 100/326 (30%), Positives = 163/326 (50%), Gaps = 7/326 (2%)
Query: 21 ASPGFLYSEGQRLALEALLSKGAEAFQTCVQREELWPFLSADEVQGLAAAAEDWTVAKQE 80
A F +E RLA +ALL G+EA+ + +E FLS+ E Q + A A +
Sbjct: 25 ARADFSDNESARLATDALLDGGSEAYWRVLSQEGEVDFLSSVEAQYIQAQAREPPCPPDT 84
Query: 81 PSGMAEGATTTDVDA-GSLSYWPGQSEQPAPVLRLGWPVDSA--WKGITRAQLYTQPPGE 137
G G D + S +Y+P SE P L W K + A +Y Q
Sbjct: 85 LGGAEAGPKGLDSSSLQSGTYFPVASEGSEPALLHSWASAEKPYLKEKSSATVYFQTVKH 144
Query: 138 GQPPLKELVRLEIQAAHKLVAVVMDVFTDPDLLLDLVDAATRRWVPVYLLLDRQQLPAFL 197
+++LVR I +++ ++MDVFTD ++ D+++AA +R V V +LLD+ + F
Sbjct: 145 NN--IRDLVRRCITRTSQVLVILMDVFTDVEIFCDILEAANKRGVFVCVLLDQGGVKLFQ 202
Query: 198 ELAQQLGVNPWNTENVDVRVVRGCSFQSRWRRQVSGTVREKFVLLDGERVISGSYSFTWS 257
E+ ++ ++ + +N+ +R V G + ++ R+ +G +REKF++ D V+SGSYSFTW
Sbjct: 203 EMCDKVQISDSHLKNISIRSVEGEIYCAKSGRKFAGQIREKFIISDWRFVLSGSYSFTWL 262
Query: 258 DARLHRGLVTLLTGEIVDAFSLEFRTLYAASCPLPPAPPQKPSVIGGLQRGRSPHRVSRR 317
+HR +++ TG+ V+ F EFR LYA+S P+ + P ++ + G +P
Sbjct: 263 CGHVHRNILSKFTGQAVELFDEEFRHLYASSKPVMGL--KSPRLVAPVPPGAAPANGRLS 320
Query: 318 RSVAPASPPPPDGPLAHRLAACRVSP 343
S AS P + R A P
Sbjct: 321 SSSGSASDRTSSNPFSGRSAGSHPVP 346
>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 47.4 bits (111), Expect = 3e-05
Identities = 41/137 (29%), Positives = 56/137 (40%), Gaps = 8/137 (5%)
Query: 282 RTLYAASCPLPPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPP---PPDGPLAHRLAA 338
R L + P PP PP P V+G HR+S S + P P P R A
Sbjct: 63 RALPGSPEPPPPPPPAAPHVLGARVAAGPTHRLSASHSRVSSRGPVGTKPKRPGQGRRAG 122
Query: 339 CRVSPATPGPALSDILRSVQRARTPSGPPARPSRSMWDLSRLSQLSGSSDGDNELKKSWG 398
R+ A P + R++ +P PP PSR+ SR +LS + K S
Sbjct: 123 ARMRSAAPASPRARAARAISNQSSP--PPPPPSRAR---SRSLRLSAPGSRHDAEKASER 177
Query: 399 SKDTPAKALMRQRGTGG 415
++ K L+ RG GG
Sbjct: 178 NRLRRKKRLVLGRGGGG 194
Score = 33.1 bits (74), Expect = 0.57
Identities = 46/166 (27%), Positives = 61/166 (36%), Gaps = 31/166 (18%)
Query: 290 PLPPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGP----------LAHRLAAC 339
PLP P + S L+ P R + S P PPPP P HRL+A
Sbjct: 40 PLPGPPSRSRSPSSRLKLPADPPR-ALPGSPEPPPPPPPAAPHVLGARVAAGPTHRLSAS 98
Query: 340 RVSPATPGPALSDILRSVQ--------RARTPSGPPARPSRSMWDLSRLSQLSGSSDGDN 391
++ GP + R Q R+ P+ P AR +R++ + S S
Sbjct: 99 HSRVSSRGPVGTKPKRPGQGRRAGARMRSAAPASPRARAARAISNQSSPPPPPPSRARSR 158
Query: 392 ELKKSW-GSKDTPAKALMRQR---------GTGGGPWGEVDSRPPW 427
L+ S GS+ KA R R G GGG GE W
Sbjct: 159 SLRLSAPGSRHDAEKASERNRLRRKKRLVLGRGGG--GECAHAHEW 202
>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
sapiens]
Length = 274
Score = 47.4 bits (111), Expect = 3e-05
Identities = 41/137 (29%), Positives = 56/137 (40%), Gaps = 8/137 (5%)
Query: 282 RTLYAASCPLPPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPP---PPDGPLAHRLAA 338
R L + P PP PP P V+G HR+S S + P P P R A
Sbjct: 63 RALPGSPEPPPPPPPAAPHVLGARVAAGPTHRLSASHSRVSSRGPVGTKPKRPGQGRRAG 122
Query: 339 CRVSPATPGPALSDILRSVQRARTPSGPPARPSRSMWDLSRLSQLSGSSDGDNELKKSWG 398
R+ A P + R++ +P PP PSR+ SR +LS + K S
Sbjct: 123 ARMRSAAPASPRARAARAISNQSSP--PPPPPSRAR---SRSLRLSAPGSRHDAEKASER 177
Query: 399 SKDTPAKALMRQRGTGG 415
++ K L+ RG GG
Sbjct: 178 NRLRRKKRLVLGRGGGG 194
Score = 33.1 bits (74), Expect = 0.57
Identities = 46/166 (27%), Positives = 61/166 (36%), Gaps = 31/166 (18%)
Query: 290 PLPPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGP----------LAHRLAAC 339
PLP P + S L+ P R + S P PPPP P HRL+A
Sbjct: 40 PLPGPPSRSRSPSSRLKLPADPPR-ALPGSPEPPPPPPPAAPHVLGARVAAGPTHRLSAS 98
Query: 340 RVSPATPGPALSDILRSVQ--------RARTPSGPPARPSRSMWDLSRLSQLSGSSDGDN 391
++ GP + R Q R+ P+ P AR +R++ + S S
Sbjct: 99 HSRVSSRGPVGTKPKRPGQGRRAGARMRSAAPASPRARAARAISNQSSPPPPPPSRARSR 158
Query: 392 ELKKSW-GSKDTPAKALMRQR---------GTGGGPWGEVDSRPPW 427
L+ S GS+ KA R R G GGG GE W
Sbjct: 159 SLRLSAPGSRHDAEKASERNRLRRKKRLVLGRGGG--GECAHAHEW 202
>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
Length = 257
Score = 42.7 bits (99), Expect = 7e-04
Identities = 53/199 (26%), Positives = 70/199 (35%), Gaps = 23/199 (11%)
Query: 297 QKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSPATPGPALSDILRS 356
QK G +RG SP V+ S P GPL + P PA + R+
Sbjct: 40 QKTLGPAGARRGHSPPTVAPAASAGSQEHPGAGGPLCFPARSAAWGP----PARAS--RA 93
Query: 357 VQRARTPSGPPAR-PSRSMWDLSRLSQLSGSSDGD---------NELKKSWGSKDTPAKA 406
R P+GPP R P R +R S G++ G S G++ PA+
Sbjct: 94 AGRRAGPAGPPCRAPGRGRAAATRRSPAPGTARGSPAGVERAGGATAASSAGTRSVPARR 153
Query: 407 LMRQRGTGGGPWGEVDSRPPWGGALPLPPAHRLRYLS---PARRRFGGDAT----FKLQE 459
L G G R P ALP P+ R+ + P R G T F +
Sbjct: 154 LPPPCGGTSLGAGSRALRRPGSAALPRSPSSSRRWAAMPGPGAPRPGAPGTWPVGFAVAA 213
Query: 460 PRGVRPSDWAPRAGLGGQP 478
P S P + G P
Sbjct: 214 PPAAAASVAPPPPAVAGAP 232
>gi|57242766 hypothetical protein LOC168455 [Homo sapiens]
Length = 235
Score = 42.0 bits (97), Expect = 0.001
Identities = 46/183 (25%), Positives = 68/183 (37%), Gaps = 26/183 (14%)
Query: 214 DVRVVRGCSFQSRWRRQVSGTVREKFVLLDGERVISGSYS--------FTWSDARLHRGL 265
D R G ++R + V R + L D + + ++ F SDA L L
Sbjct: 24 DFRAEDGAGLEAREEKVVYS--RSQLSLADSTKALGDAFKLFMPRSTEFMSSDAELWSFL 81
Query: 266 VTL---LTGEIVDAFSLEFRTLYAASCPLPPAPP------QKPSVIGGLQRGRSPHRVSR 316
+L + I+ + + + A P PP PP ++P +R R R +
Sbjct: 82 CSLKHQFSPHILRSKDVYGYSSCRALVPDPPGPPTARGQARRPVPRAAARRRRRGARAAA 141
Query: 317 RRSVAPASPPPPDGPLAHRLAACRVSPATPGPALSD-ILRSVQRARTP---SGPPARPSR 372
R P PPPP P +C P PGP L + RA TP + P R
Sbjct: 142 ARRRKPRPPPPPPPPPEE---SCPAKPVAPGPCFGGRTLEEIWRAATPTLTTFPTIRVGS 198
Query: 373 SMW 375
+W
Sbjct: 199 DVW 201
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 41.6 bits (96), Expect = 0.002
Identities = 55/213 (25%), Positives = 71/213 (33%), Gaps = 52/213 (24%)
Query: 290 PLPPAPPQKPSVIGG--LQR---------GRSPHRVSRRRSVAPASPPPPDGPLAHRLAA 338
PL PPQ P + LQ G++P S ++P + PPP P + A
Sbjct: 780 PLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP---PVLA 836
Query: 339 CRVSPATPGPALSDILRSVQRARTPS----------------GPPARPSRSMWDLSRLSQ 382
+ P P S L++ +R TP GPP PSRS
Sbjct: 837 APLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSP-------- 888
Query: 383 LSGSSDGDNELKKSWGSKDTPAKALMRQRGTGGGPWGEVDSRPPWGGALPLPPAHRLRYL 442
S + G + S + TP + RG GP G G A PP L
Sbjct: 889 -SSTLSGPDLAGHSSSATSTPEEL----RGYDSGPEG--------GAAASPPPDAELAAC 935
Query: 443 SPARRRFGGDATFKLQEPRGVRPSDWAPRAGLG 475
PA G + G P W P G G
Sbjct: 936 HPAAWSRGPAPPLAFRGAPGA-PLPWPPATGPG 967
Score = 37.0 bits (84), Expect = 0.039
Identities = 31/95 (32%), Positives = 36/95 (37%), Gaps = 17/95 (17%)
Query: 293 PAPPQKPSVIGGLQRGRS------------PHRVSRRRSVAPASPPPPDGPLAHRLAACR 340
PA ++PS GGLQR S P R P +P P P L A R
Sbjct: 222 PAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALR 281
Query: 341 VSPATP-----GPALSDILRSVQRARTPSGPPARP 370
TP PAL + S +PSG ARP
Sbjct: 282 PPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARP 316
Score = 31.2 bits (69), Expect = 2.2
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 292 PPAPPQKPSVIG-GLQRGRSPHRVSRRRSVAPASPPPPDGPLA--HRLAACRVSPATPGP 348
PP+PP P + ++P+ ++ AP SPPP A A+ VSP+ P
Sbjct: 633 PPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPP 692
Query: 349 ALSDILRSVQRARTPSGPPARPSRS 373
+ + + + P PPA P S
Sbjct: 693 SQAPPSLAAPPLQVPPSPPASPPMS 717
Score = 30.0 bits (66), Expect = 4.8
Identities = 28/90 (31%), Positives = 36/90 (40%), Gaps = 14/90 (15%)
Query: 287 ASCPL--PPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSP- 343
A CPL PP+P P P S + P +PP P L + +SP
Sbjct: 565 APCPLQAPPSPLTTPP----------PETPSSIATPPPQAPPALASPPLQGLPSPPLSPL 614
Query: 344 ATPGPALSDILRSVQRARTPSGPPARPSRS 373
ATP P L ++ + P PPA P S
Sbjct: 615 ATPPPQAPPXL-ALPPLQAPPSPPASPPLS 643
Score = 29.6 bits (65), Expect = 6.3
Identities = 22/88 (25%), Positives = 35/88 (39%), Gaps = 8/88 (9%)
Query: 283 TLYAASCPLPPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVS 342
+L A +PP+PP P + SP ++ P + PP P + +
Sbjct: 698 SLAAPPLQVPPSPPASPPM--------SPSATPPPQAPPPLAAPPLQVPPSPPASPPMSP 749
Query: 343 PATPGPALSDILRSVQRARTPSGPPARP 370
ATP P + +L + PS P + P
Sbjct: 750 SATPPPRVPPLLAAPPLQVPPSPPASLP 777
>gi|62945417 dystrophia myotonica-containing WD repeat motif protein
[Homo sapiens]
Length = 674
Score = 41.6 bits (96), Expect = 0.002
Identities = 30/91 (32%), Positives = 36/91 (39%), Gaps = 27/91 (29%)
Query: 286 AASCPLPPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSPAT 345
+A P+PP PPQ P P S + PAS PPP GP
Sbjct: 49 SAQTPVPPQPPQPPP---------GPASASGPGAAGPASSPPPAGP-------------G 86
Query: 346 PGPALSDILRSVQRARTPSG-----PPARPS 371
PGPAL + S+ R P PPA P+
Sbjct: 87 PGPALPAVRLSLVRLGEPDSAGAGEPPATPA 117
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 41.6 bits (96), Expect = 0.002
Identities = 52/197 (26%), Positives = 72/197 (36%), Gaps = 20/197 (10%)
Query: 286 AASCPLPPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHR---LAACRVS 342
AA+ P PAPP P+ + R+P + + P+ P GP A R LAA +
Sbjct: 124 AAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPA 183
Query: 343 PATP-------GPALSDILRSVQRARTPSGPPARPSRSMWDLSRLSQLSGSSDGDNELKK 395
PA P GP + R PP P+ Q +G ++
Sbjct: 184 PAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEG-GAVRA 242
Query: 396 SWGSKDTPAKALMRQRGTGGGPWGEVDSRPPWGGALPLPPAHRLRYLSPARRRFGGDATF 455
++ + ++R G GG G + +R G L A R R R R G
Sbjct: 243 GGAARPVSLREVVRYLGGSGGAGGRL-TRGRVQGLLEEEAAARGRL---ERTRLGA---- 294
Query: 456 KLQEPRGVRPSDWAPRA 472
L PRG RP P A
Sbjct: 295 -LALPRGDRPGRAPPAA 310
Score = 37.7 bits (86), Expect = 0.023
Identities = 29/88 (32%), Positives = 36/88 (40%), Gaps = 18/88 (20%)
Query: 292 PPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLA--------HRLAACRVSP 343
PPAPP+ P RG + PA PPPP P+A AA +P
Sbjct: 108 PPAPPRAP-------RGAPAAAAAAAPPPTPA-PPPPPAPVAAAAPARAPRAAAAAATAP 159
Query: 344 ATPGPALSDILRSVQRARTPSGPPARPS 371
+PGPA QRA + PP P+
Sbjct: 160 PSPGPAQPG--PRAQRAAPLAAPPPAPA 185
>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
sapiens]
Length = 406
Score = 40.8 bits (94), Expect = 0.003
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Query: 290 PLPPAPPQKPSVIGGLQRGRSPH-RVSRRRSVAPASPPPPDGPLAHRLAACRVSPATPGP 348
P+ P PP P G P R++ P +P PP P+A ++P PGP
Sbjct: 266 PIAPMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPMAPVPPWPPMAPVPTGPPMAPVPPGP 325
Query: 349 ALSDILRSVQRARTPSGPPARP 370
++ + AR P GPP P
Sbjct: 326 PMARVPPGPPMARVPPGPPMAP 347
Score = 35.8 bits (81), Expect = 0.088
Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 8/81 (9%)
Query: 290 PLPPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSPATPGPA 349
P+PP PP P G P P + PP P+A ++P PGP
Sbjct: 302 PVPPWPPMAPVPTGPPMAPVPPG--------PPMARVPPGPPMARVPPGPPMAPLPPGPP 353
Query: 350 LSDILRSVQRARTPSGPPARP 370
++ + A P GPP P
Sbjct: 354 MAPLPPGPPMAPLPPGPPMAP 374
Score = 35.0 bits (79), Expect = 0.15
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 17/81 (20%)
Query: 290 PLPPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSPATPGPA 349
P+PP PP+ P V + P P P P+A R++P PGP
Sbjct: 248 PVPPMPPRPPMV-----------------PMPPRPPIAPMPPMAPVPPGSRMAPVPPGPR 290
Query: 350 LSDILRSVQRARTPSGPPARP 370
++ + A P PP P
Sbjct: 291 MAPVPPWPPMAPVPPWPPMAP 311
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 40.0 bits (92), Expect = 0.005
Identities = 53/179 (29%), Positives = 69/179 (38%), Gaps = 18/179 (10%)
Query: 292 PPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPA--SP-PPPDGPLAHRLAACRVSPATPGP 348
PP P+ PS++ G G SP + R ++P SP PP P A A+ P
Sbjct: 997 PPRQPEPPSLVAGASGGASPVGFTPRGGLSPPGHSPGPPRTFPSAPPRASGSHGSLLLPP 1056
Query: 349 ALSDILRSVQRARTPSGPPARPSRSMWDLSRL--SQLSGSSDGDNELKKS---WGSKDTP 403
A S V + R PP P R DL + SQ + DG L+++ +
Sbjct: 1057 ASSPPPPQVPQRR--GTPPLTPGRLTQDLKLISASQPALPQDGAQTLRRASPHSSGESMA 1114
Query: 404 AKALMRQRGTGGGPWGEVDSRPPWG---GALP-----LPPAHRLRYLSPARRRFGGDAT 454
A L + G G G G P G GA+P LP L P FG AT
Sbjct: 1115 AFPLFPRAGGGSGGSGSSGGLGPPGRPYGAIPGQHVTLPRKTSSGSLPPPLSLFGARAT 1173
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 39.7 bits (91), Expect = 0.006
Identities = 56/219 (25%), Positives = 72/219 (32%), Gaps = 52/219 (23%)
Query: 284 LYAASCPLPPAPPQKPSVIGG--LQR---------GRSPHRVSRRRSVAPASPPPPDGPL 332
L A L PPQ P + LQ G++P S ++P + PPP P
Sbjct: 505 LAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP- 563
Query: 333 AHRLAACRVSPATPGPALSDILRSVQRARTPS----------------GPPARPSRSMWD 376
+ A + P P S L++ +R TP GPP PSRS
Sbjct: 564 --PVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSP-- 619
Query: 377 LSRLSQLSGSSDGDNELKKSWGSKDTPAKALMRQRGTGGGPWGEVDSRPPWGGALPLPPA 436
S + G + S + TP + RG GP G G A PP
Sbjct: 620 -------SSTLSGPDLAGHSSSATSTPEEL----RGYDSGPEG--------GAAASPPPD 660
Query: 437 HRLRYLSPARRRFGGDATFKLQEPRGVRPSDWAPRAGLG 475
L PA G + G P W P G G
Sbjct: 661 AELAACHPAAWSRGPAPPLAFRGAPGA-PLPWPPATGPG 698
Score = 37.4 bits (85), Expect = 0.030
Identities = 45/145 (31%), Positives = 57/145 (39%), Gaps = 8/145 (5%)
Query: 293 PAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSPATPGPALSD 352
PA ++PS GGLQR P S S P S P GP A P+ P P
Sbjct: 222 PAARRRPSAGGGLQR---PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQ 278
Query: 353 ILRSVQRARTPSGPPARPSRSMWDLSRLSQLSGSSDGDNELKKSWGSKDTP-AKALMRQR 411
LR Q TP A P+ S L+ S S+ ++ + + TP + +L Q
Sbjct: 279 ALRPPQ--VTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPTLPA--TPHSSSLTCQL 334
Query: 412 GTGGGPWGEVDSRPPWGGALPLPPA 436
T S PP LP PPA
Sbjct: 335 ATPLPLAPPSPSAPPSLQTLPSPPA 359
Score = 33.5 bits (75), Expect = 0.44
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 290 PLPPA-PPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSP----- 343
P PPA PP + + G ++ H ++P + PPP P A L + P
Sbjct: 355 PSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPAS 414
Query: 344 ------ATPGPALSDILRSVQRARTPSGPPARP 370
ATP P + L +V + P PP P
Sbjct: 415 PPLSPLATPSPQAPNAL-AVHLLQAPFSPPPSP 446
Score = 32.3 bits (72), Expect = 0.97
Identities = 28/93 (30%), Positives = 34/93 (36%), Gaps = 8/93 (8%)
Query: 286 AASCPLPPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVS--- 342
A P PA P +P GLQ R P R+ APA P PLA + +
Sbjct: 259 ARGTPRAPAHPSQPKP-KGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQA 317
Query: 343 ----PATPGPALSDILRSVQRARTPSGPPARPS 371
PATP + + P P A PS
Sbjct: 318 PPTLPATPHSSSLTCQLATPLPLAPPSPSAPPS 350
Score = 31.2 bits (69), Expect = 2.2
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 292 PPAPPQKPSVIG-GLQRGRSPHRVSRRRSVAPASPPPPDGPLA--HRLAACRVSPATPGP 348
PP+PP P + ++P+ ++ AP SPPP A A+ VSP+ P
Sbjct: 408 PPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPP 467
Query: 349 ALSDILRSVQRARTPSGPPARPSRS 373
+ + + + P PPA P S
Sbjct: 468 SQAPPSLAAPPLQVPPSPPASPPMS 492
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 39.7 bits (91), Expect = 0.006
Identities = 56/219 (25%), Positives = 72/219 (32%), Gaps = 52/219 (23%)
Query: 284 LYAASCPLPPAPPQKPSVIGG--LQR---------GRSPHRVSRRRSVAPASPPPPDGPL 332
L A L PPQ P + LQ G++P S ++P + PPP P
Sbjct: 466 LAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAP- 524
Query: 333 AHRLAACRVSPATPGPALSDILRSVQRARTPS----------------GPPARPSRSMWD 376
+ A + P P S L++ +R TP GPP PSRS
Sbjct: 525 --PVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSP-- 580
Query: 377 LSRLSQLSGSSDGDNELKKSWGSKDTPAKALMRQRGTGGGPWGEVDSRPPWGGALPLPPA 436
S + G + S + TP + RG GP G G A PP
Sbjct: 581 -------SSTLSGPDLAGHSSSATSTPEEL----RGYDSGPEG--------GAAASPPPD 621
Query: 437 HRLRYLSPARRRFGGDATFKLQEPRGVRPSDWAPRAGLG 475
L PA G + G P W P G G
Sbjct: 622 AELAACHPAAWSRGPAPPLAFRGAPGA-PLPWPPATGPG 659
Score = 36.2 bits (82), Expect = 0.067
Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Query: 286 AASCPLPPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSPAT 345
A P PA P +P GLQ R P R+ APA P PLA + SP+
Sbjct: 250 ARGTPRAPAHPSQPKP-KGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSA 308
Query: 346 PGPALSDILRSVQRARTPSGPPARPSRSM 374
P P+L + P+ PP++ + S+
Sbjct: 309 P-PSLQTL------PSPPATPPSQATTSL 330
Score = 35.8 bits (81), Expect = 0.088
Identities = 26/77 (33%), Positives = 31/77 (40%), Gaps = 9/77 (11%)
Query: 293 PAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSPATPGPALSD 352
PA ++PS GGLQR P S S P S P GP A P+ P P
Sbjct: 213 PAARRRPSAGGGLQR---PASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKP---- 265
Query: 353 ILRSVQRARTPSGPPAR 369
+ +Q R P P R
Sbjct: 266 --KGLQALRPPQVTPPR 280
Score = 33.5 bits (75), Expect = 0.44
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 290 PLPPA-PPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSP----- 343
P PPA PP + + G ++ H ++P + PPP P A L + P
Sbjct: 316 PSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPAS 375
Query: 344 ------ATPGPALSDILRSVQRARTPSGPPARP 370
ATP P + L +V + P PP P
Sbjct: 376 PPLSPLATPSPQAPNAL-AVHLLQAPFSPPPSP 407
Score = 31.2 bits (69), Expect = 2.2
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)
Query: 292 PPAPPQKPSVIG-GLQRGRSPHRVSRRRSVAPASPPPPDGPLA--HRLAACRVSPATPGP 348
PP+PP P + ++P+ ++ AP SPPP A A+ VSP+ P
Sbjct: 369 PPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPP 428
Query: 349 ALSDILRSVQRARTPSGPPARPSRS 373
+ + + + P PPA P S
Sbjct: 429 SQAPPSLAAPPLQVPPSPPASPPMS 453
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 39.7 bits (91), Expect = 0.006
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 10/69 (14%)
Query: 290 PLPPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSPATPGPA 349
P PP PP P + L G PH+ + P PPPP+ P P P P
Sbjct: 606 PPPPPPPPPPPYLASLPLGYPPHQPAYLLPPRPDGPPPPEYP----------PPPPPPPH 655
Query: 350 LSDILRSVQ 358
+ D + S++
Sbjct: 656 IYDFVNSLE 664
>gi|118402590 myosin XV [Homo sapiens]
Length = 3530
Score = 38.5 bits (88), Expect = 0.014
Identities = 57/174 (32%), Positives = 69/174 (39%), Gaps = 31/174 (17%)
Query: 292 PPAPPQKPSVIGGLQRGRSPHRVSRRRS---VAPAS-PPPPDGPLAHRLAACRVSP---- 343
PPAPP P+ + GL R SP+ RR APA PP P + VSP
Sbjct: 675 PPAPPLSPA-LSGLPRPASPYGSLRRHPPPWAAPAHVPPAPQASWWAFVEPPAVSPEVPP 733
Query: 344 ---ATPGPALSDILRSVQRARTPSGPPARPSRSMWDLSRLSQLSGSSDGDNELKKSWG-S 399
A PGP S R +R G P R+ SR S + L+ S G
Sbjct: 734 DLLAFPGPRPS--FRGSRRRGAAFGFPGASPRA----SRRRAWSPLASPQPSLRSSPGLG 787
Query: 400 KDTPAKALMRQRGTGGGPWGEVDSRPPWGGALPLPPAHRLRYL--SPARRRFGG 451
+P Q GP+ +PP+ LPPA R R L SPA RR G
Sbjct: 788 YCSPLAPPSPQLSLRTGPF-----QPPF-----LPPARRPRSLQESPAPRRAAG 831
Score = 30.0 bits (66), Expect = 4.8
Identities = 53/209 (25%), Positives = 71/209 (33%), Gaps = 46/209 (22%)
Query: 292 PPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSPATPGPALS 351
PPAP P + SP R P+S PPP PL+ L+ PA+P
Sbjct: 644 PPAPQPAPRTLSHWSALLSPPVPPR----PPSSGPPPAPPLSPALSGL-PRPASP---YG 695
Query: 352 DILRSVQRARTPSGPPARPSRSMW--------------DLSRLSQLSGSSDGDNELKKSW 397
+ R P+ P P S W DL S G ++
Sbjct: 696 SLRRHPPPWAAPAHVPPAPQASWWAFVEPPAVSPEVPPDLLAFPGPRPSFRGSRRRGAAF 755
Query: 398 GSKDTPAKALMRQRGTG-GGPWGEVDSRPPWGGALPL-PPAHRLR---------YLSPAR 446
G +A R+ + P + S P G PL PP+ +L +L PAR
Sbjct: 756 GFPGASPRASRRRAWSPLASPQPSLRSSPGLGYCSPLAPPSPQLSLRTGPFQPPFLPPAR 815
Query: 447 RRFGGDATFKLQEPRGVRPSDWAPRAGLG 475
R PR ++ S APR G
Sbjct: 816 R------------PRSLQESP-APRRAAG 831
>gi|239747677 PREDICTED: hypothetical protein [Homo sapiens]
Length = 262
Score = 38.5 bits (88), Expect = 0.014
Identities = 46/184 (25%), Positives = 67/184 (36%), Gaps = 26/184 (14%)
Query: 305 LQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSPATPGPALSDILRS----VQRA 360
L R RSPH +S ++PPPP RLA R PA P P + R+ +R
Sbjct: 90 LARARSPHSMSPTHFHGASAPPPP----PPRLAQPRAGPAPPPPGPPSLRRAPINQPRRC 145
Query: 361 RTPSGPPARPSRSMWDLSRLSQLSGSSDGDNELKKSWGSKDTPAKALMRQRGTGGGPWG- 419
++ G P R S + G+ ++L + G + K RG G G
Sbjct: 146 QSSGGSPRR--------CHCSSVPGAPAPASQLPRPAGEVN-KVKYPSAARGPGRSTLGV 196
Query: 420 --EVDSRPPWGGALPLPPA------HRLRYLSPARRRFGGDATFKLQEPRGVRPSDWAPR 471
E + P GG + + H L P + +++ R WAPR
Sbjct: 197 GCEPAASPAAGGWAGVTSSDSRAVPHTLLPQRPLQLFVARSCSWRFSPESQARSEHWAPR 256
Query: 472 AGLG 475
G
Sbjct: 257 LRCG 260
>gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo
sapiens]
Length = 262
Score = 38.5 bits (88), Expect = 0.014
Identities = 46/184 (25%), Positives = 67/184 (36%), Gaps = 26/184 (14%)
Query: 305 LQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSPATPGPALSDILRS----VQRA 360
L R RSPH +S ++PPPP RLA R PA P P + R+ +R
Sbjct: 90 LARARSPHSMSPTHFHGASAPPPP----PPRLAQPRAGPAPPPPGPPSLRRAPINQPRRC 145
Query: 361 RTPSGPPARPSRSMWDLSRLSQLSGSSDGDNELKKSWGSKDTPAKALMRQRGTGGGPWG- 419
++ G P R S + G+ ++L + G + K RG G G
Sbjct: 146 QSSGGSPRR--------CHCSSVPGAPAPASQLPRPAGEVN-KVKYPSAARGPGRSTLGV 196
Query: 420 --EVDSRPPWGGALPLPPA------HRLRYLSPARRRFGGDATFKLQEPRGVRPSDWAPR 471
E + P GG + + H L P + +++ R WAPR
Sbjct: 197 GCEPAASPAAGGWAGVTSSDSRAVPHTLLPQRPLQLFVARSCSWRFSPESQARSEHWAPR 256
Query: 472 AGLG 475
G
Sbjct: 257 LRCG 260
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 38.5 bits (88), Expect = 0.014
Identities = 26/82 (31%), Positives = 29/82 (35%), Gaps = 6/82 (7%)
Query: 286 AASCPLPPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSPAT 345
A+S PLPP PP P +P V P PPPP P P
Sbjct: 521 ASSGPLPPPPPPLP------PSSDTPETVQNGPVTPPMPPPPPPPPPPPPPPPPPPPPPL 574
Query: 346 PGPALSDILRSVQRARTPSGPP 367
PGPA + PS PP
Sbjct: 575 PGPAAETVPAPPLAPPLPSAPP 596
>gi|45827729 scribble isoform b [Homo sapiens]
Length = 1630
Score = 37.7 bits (86), Expect = 0.023
Identities = 37/154 (24%), Positives = 54/154 (35%), Gaps = 29/154 (18%)
Query: 290 PLPPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSPATPGPA 349
P PP+P + P+ + + R + P S PP D P P TPGPA
Sbjct: 1305 PSPPSPDELPANV---------KQAYRAFAAVPTSHPPEDAP---------AQPPTPGPA 1346
Query: 350 LSDILRSVQ----------RARTPSGPPARPSR-SMWDLSRLSQLSGSSDGDNELKKSWG 398
S S + R GPP R S DL ++ + +
Sbjct: 1347 ASPEQLSFRERQKYFELEVRVPQAEGPPKRVSLVGADDLRKMQEEEARKLQQKRAQMLRE 1406
Query: 399 SKDTPAKALMRQRGTGGGPWGEVDSRPPWGGALP 432
+ + A+A + G G + D +PPW P
Sbjct: 1407 AAEAGAEARLALDGETLGEEEQEDEQPPWASPSP 1440
>gi|45827731 scribble isoform a [Homo sapiens]
Length = 1655
Score = 37.7 bits (86), Expect = 0.023
Identities = 37/154 (24%), Positives = 54/154 (35%), Gaps = 29/154 (18%)
Query: 290 PLPPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSPATPGPA 349
P PP+P + P+ + + R + P S PP D P P TPGPA
Sbjct: 1305 PSPPSPDELPANV---------KQAYRAFAAVPTSHPPEDAP---------AQPPTPGPA 1346
Query: 350 LSDILRSVQ----------RARTPSGPPARPSR-SMWDLSRLSQLSGSSDGDNELKKSWG 398
S S + R GPP R S DL ++ + +
Sbjct: 1347 ASPEQLSFRERQKYFELEVRVPQAEGPPKRVSLVGADDLRKMQEEEARKLQQKRAQMLRE 1406
Query: 399 SKDTPAKALMRQRGTGGGPWGEVDSRPPWGGALP 432
+ + A+A + G G + D +PPW P
Sbjct: 1407 AAEAGAEARLALDGETLGEEEQEDEQPPWASPSP 1440
>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 350
Score = 37.4 bits (85), Expect = 0.030
Identities = 40/118 (33%), Positives = 44/118 (37%), Gaps = 18/118 (15%)
Query: 293 PAPPQKPSVIGGLQRGRSPHRVSRRR--SVAPASPPPPDGPLAHRLAACRVSP-----AT 345
P+PP +P R R PH R P PPP P A CR SP T
Sbjct: 126 PSPPLQP-------RSRHPHTRYPRAVPEATPLRPPPGTRPRAKSRPGCRSSPFPARSRT 178
Query: 346 PGPALSDILRSVQRARTPSGPPARPSRSMWDLSRLSQLSGSSDGDNELKKSWGSKDTP 403
PG A R R R P P P RS L LS S G K++ G TP
Sbjct: 179 PGEAGPP--RGDPRPRAPR-PGDHPRRSP-ALRETPSLSPPSPGRRNGKRAAGKGTTP 232
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 37.4 bits (85), Expect = 0.030
Identities = 20/42 (47%), Positives = 25/42 (59%), Gaps = 4/42 (9%)
Query: 290 PLPPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGP 331
PLPPAPPQ PS +G + + P+ VS P +PPPP P
Sbjct: 1966 PLPPAPPQ-PSSMGPV---KIPNTVSTPLQAPPPTPPPPPPP 2003
>gi|26051204 calcium/calmodulin-dependent protein kinase II beta
isoform 1 [Homo sapiens]
Length = 666
Score = 37.4 bits (85), Expect = 0.030
Identities = 29/96 (30%), Positives = 42/96 (43%), Gaps = 29/96 (30%)
Query: 290 PLPPAPPQKPSVIGGLQRGRSPHRVSRRRSVAPASPPPPDGPLAHRLAACRVSPA----- 344
PLP P+ ++ ++RG + P +GPL+ C +SPA
Sbjct: 442 PLPAPSPRISDILNSVRRG--------------SGTPEAEGPLSAGPPPC-LSPALLGPL 486
Query: 345 -TPGPALSDILRSVQRAR--------TPSGPPARPS 371
+P P +SDIL SV+R +P GPP PS
Sbjct: 487 SSPSPRISDILNSVRRGSGTPEAEGPSPVGPPPCPS 522
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,690,314
Number of Sequences: 37866
Number of extensions: 1339152
Number of successful extensions: 7925
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 365
Number of HSP's that attempted gapping in prelim test: 7113
Number of HSP's gapped (non-prelim): 1006
length of query: 478
length of database: 18,247,518
effective HSP length: 106
effective length of query: 372
effective length of database: 14,233,722
effective search space: 5294944584
effective search space used: 5294944584
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.