BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|153218470 BarH-like homeobox 1 [Homo sapiens] (254 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|153218470 BarH-like homeobox 1 [Homo sapiens] 511 e-145 gi|6633798 BarH-like homeobox 2 [Homo sapiens] 167 8e-42 gi|147901462 brain specific homeobox [Homo sapiens] 95 7e-20 gi|89257348 homeo box HB9 [Homo sapiens] 86 4e-17 gi|39930383 BarH-like homeobox 2 [Homo sapiens] 85 5e-17 gi|14149728 BarH-like homeobox 1 [Homo sapiens] 85 7e-17 gi|64225290 distal-less homeobox 1 isoform 1 [Homo sapiens] 84 1e-16 gi|11386181 H2.0-like homeobox [Homo sapiens] 82 3e-16 gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 80 1e-15 gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] 80 1e-15 gi|149588930 gastrulation brain homeo box 1 [Homo sapiens] 80 2e-15 gi|148613882 homeobox A4 [Homo sapiens] 80 2e-15 gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens] 80 2e-15 gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] 79 3e-15 gi|82659115 distal-less homeobox 6 [Homo sapiens] 79 4e-15 gi|20143962 distal-less homeobox 4 isoform a [Homo sapiens] 79 4e-15 gi|20143960 distal-less homeobox 4 isoform b [Homo sapiens] 78 6e-15 gi|4885187 distal-less homeobox 5 [Homo sapiens] 77 1e-14 gi|4758168 distal-less homeobox 2 [Homo sapiens] 77 1e-14 gi|45593144 gastrulation brain homeo box 2 [Homo sapiens] 77 1e-14 gi|4885185 distal-less homeobox 3 [Homo sapiens] 77 2e-14 gi|27886557 msh homeobox 2 [Homo sapiens] 77 2e-14 gi|226437602 NK1 homeobox 2 [Homo sapiens] 76 2e-14 gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens] 76 2e-14 gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens] 76 2e-14 gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens] 76 2e-14 gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 75 6e-14 gi|94536800 empty spiracles homolog 1 [Homo sapiens] 74 1e-13 gi|116174748 developing brain homeobox 2 [Homo sapiens] 74 2e-13 gi|13273315 homeobox B4 [Homo sapiens] 73 3e-13 >gi|153218470 BarH-like homeobox 1 [Homo sapiens] Length = 254 Score = 511 bits (1317), Expect = e-145 Identities = 254/254 (100%), Positives = 254/254 (100%) Query: 1 MQRPGEPGAARFGPPEGCADHRPHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKFG 60 MQRPGEPGAARFGPPEGCADHRPHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKFG Sbjct: 1 MQRPGEPGAARFGPPEGCADHRPHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKFG 60 Query: 61 VQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAGPGLPGAAGAPHLPLE 120 VQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAGPGLPGAAGAPHLPLE Sbjct: 61 VQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAGPGLPGAAGAPHLPLE 120 Query: 121 LQLRGKLEAAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLG 180 LQLRGKLEAAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLG Sbjct: 121 LQLRGKLEAAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLG 180 Query: 181 LSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNSIPTSEQLTEQERAKDAEKP 240 LSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNSIPTSEQLTEQERAKDAEKP Sbjct: 181 LSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNSIPTSEQLTEQERAKDAEKP 240 Query: 241 AEVPGEPSDRSRED 254 AEVPGEPSDRSRED Sbjct: 241 AEVPGEPSDRSRED 254 >gi|6633798 BarH-like homeobox 2 [Homo sapiens] Length = 279 Score = 167 bits (423), Expect = 8e-42 Identities = 114/267 (42%), Positives = 147/267 (55%), Gaps = 47/267 (17%) Query: 1 MQRPGEPGAARFGPPEGCADHRPHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKFG 60 + PG+ AAR RY++FMI+EIL++ +L + Sbjct: 9 LSSPGQLKAAR------------RRYKTFMIDEILSKE----------TCDYFEKLSLYS 46 Query: 61 VQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSG--LSSALLAAGPGLPGAAGAPHLP 118 V L RP H A +PL + + S L+ A PG+ A Sbjct: 47 VCPSLVVRPKPLHSCTGSPSLRA---YPLLSVITRQPTVISHLVPATPGIAQALSCH--- 100 Query: 119 LELQLRGKLEAAGPG------------EPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKY 166 Q+ + A PG +P + KK RRSRT+FTELQLMGLEK+F+KQKY Sbjct: 101 ---QVTEAVSAEAPGGEALASSESETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKY 157 Query: 167 LSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNSIPTSE 226 LSTPDR+DLA+SLGL+QLQVKTWYQNRRMKWKK+VL+ GG E+PTKPKGRPKKNSIPTSE Sbjct: 158 LSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLK-GGQEAPTKPKGRPKKNSIPTSE 216 Query: 227 QLTEQERAKDAEKPAEVPGEPSDRSRE 253 ++ E E +++ + EPS E Sbjct: 217 EI-EAEEKMNSQAQGQEQLEPSQGQEE 242 >gi|147901462 brain specific homeobox [Homo sapiens] Length = 233 Score = 94.7 bits (234), Expect = 7e-20 Identities = 82/247 (33%), Positives = 111/247 (44%), Gaps = 56/247 (22%) Query: 25 RYRSFMIEEILTEPPGP-KGAAP---AAAAAAAGELLKFG-----VQALLAARPFHSHLA 75 R SF IE+IL P P + AP A++ A+ LL +G LLA H Sbjct: 16 RPTSFFIEDILLHKPKPLREVAPDHFASSLASRVPLLDYGYPLMPTPTLLAPHAHH---- 71 Query: 76 VLKAEQAAVFKFPLAPLGCSGLSSALLAAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEP 135 PL G+P A PH P +L GK Sbjct: 72 ---------------PLHKGDHHHPYFLTTSGMPVPALFPH-PQHAELPGK--------- 106 Query: 136 GTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRM 195 + R++RTVF++ QL GLEKRFE Q+YLSTP+R++LA +L LS+ QVKTW+QNRRM Sbjct: 107 ---HCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRM 163 Query: 196 KWKKIVLQG----GGLESPTKPKGRPKKNSIPTSEQ-----------LTEQERAKDAEKP 240 K KK + + + P P+G P+ + T+ + LTE E D Sbjct: 164 KHKKQLRKSQDEPKAPDGPESPEGSPRGSEAATAAEARLSLPAGPFVLTEPEDEVDIGDE 223 Query: 241 AEVPGEP 247 E+ P Sbjct: 224 GELGSGP 230 >gi|89257348 homeo box HB9 [Homo sapiens] Length = 401 Score = 85.5 bits (210), Expect = 4e-17 Identities = 76/224 (33%), Positives = 103/224 (45%), Gaps = 41/224 (18%) Query: 1 MQRPGEPGAARFGPPEGCADHRPHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKFG 60 + +PG GA G G PH + PG AA AAAAAAA L G Sbjct: 91 LPKPGFLGAGGGGGGTGGGHGGPHHHAH----------PGAAAAAAAAAAAAAAGGLALG 140 Query: 61 VQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAGPGL----PGAAGA-- 114 + P + QAA++ P+ + ++AL P L P GA Sbjct: 141 LH------PGGAQGGAGLPAQAALYGHPVYGYSAAAAAAALAGQHPALSYSYPQVQGAHP 194 Query: 115 --PHLPLEL-----QLRGKLEAAGPG-------EPGTKAK-----KGRRSRTVFTELQLM 155 P P++L QL L A+ G + ++A+ K RR RT FT QL+ Sbjct: 195 AHPADPIKLGAGTFQLDQWLRASTAGMILPKMPDFNSQAQSNLLGKCRRPRTAFTSQQLL 254 Query: 156 GLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKK 199 LE +F+ KYLS P R ++A SL L++ QVK W+QNRRMKWK+ Sbjct: 255 ELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKR 298 >gi|39930383 BarH-like homeobox 2 [Homo sapiens] Length = 387 Score = 85.1 bits (209), Expect = 5e-17 Identities = 39/65 (60%), Positives = 50/65 (76%) Query: 135 PGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRR 194 P +AKK R++RT F++ QL LE+ FE+QKYLS DR+DLA +L L+ QVKTWYQNRR Sbjct: 225 PPVRAKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRR 284 Query: 195 MKWKK 199 KWK+ Sbjct: 285 TKWKR 289 >gi|14149728 BarH-like homeobox 1 [Homo sapiens] Length = 327 Score = 84.7 bits (208), Expect = 7e-17 Identities = 39/65 (60%), Positives = 49/65 (75%) Query: 135 PGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRR 194 P + KK R++RT FT+ QL LE+ FE+QKYLS DR++LA SL L+ QVKTWYQNRR Sbjct: 171 PPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRR 230 Query: 195 MKWKK 199 KWK+ Sbjct: 231 TKWKR 235 >gi|64225290 distal-less homeobox 1 isoform 1 [Homo sapiens] Length = 255 Score = 84.0 bits (206), Expect = 1e-16 Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 5/135 (3%) Query: 87 FPLAPLGCSGLSSALLAAGPGLPGAAGAPHLPLEL----QLRGKLEAAGPGEPGTKAKKG 142 +P S SS +++ PG+A LE + + G K KK Sbjct: 69 YPYVNSVSSHASSPYISSVQSYPGSASLAQSRLEDPGADSEKSTVVEGGEVRFNGKGKKI 128 Query: 143 RRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVL 202 R+ RT+++ LQL L +RF++ +YL+ P+R +LA SLGL+Q QVK W+QN+R K+KK++ Sbjct: 129 RKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMK 188 Query: 203 QGG-GLESPTKPKGR 216 QGG LE GR Sbjct: 189 QGGAALEGSALANGR 203 >gi|11386181 H2.0-like homeobox [Homo sapiens] Length = 488 Score = 82.4 bits (202), Expect = 3e-16 Identities = 48/120 (40%), Positives = 61/120 (50%), Gaps = 3/120 (2%) Query: 135 PGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRR 194 P T +K SR VF+ LQ GLEKRFE QKY++ PDR LA LGL+ QVK W+QNRR Sbjct: 269 PQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRR 328 Query: 195 MKWKKIVLQGGGLESPTKPKGRPKKNSIPTSEQLTEQERAKDAEKPAEVPGEPSDRSRED 254 MKW+ + + K G P ++ EQ+ + E E SD D Sbjct: 329 MKWRH-SKEAQAQKDKDKEAGEKPSGGAPAAD--GEQDERSPSRSEGEAESESSDSESLD 385 >gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] Length = 814 Score = 80.5 bits (197), Expect = 1e-15 Identities = 52/122 (42%), Positives = 67/122 (54%), Gaps = 6/122 (4%) Query: 106 PGLPGAAGAPHLPLELQLRGKLEAAGPGEPGT----KAKKGRRSRTVFTELQLMGLEKRF 161 PG PG A AP +G AA P T K+ K RR+RT FT QL+ LE +F Sbjct: 623 PGPPGGAAAPG-GAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKF 681 Query: 162 EKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNS 221 + +YLS +R++LA SL L++ QVK W+QNRR KWKK G +PT G P + Sbjct: 682 KATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK-QNPGADTSAPTGGGGGPGPGA 740 Query: 222 IP 223 P Sbjct: 741 GP 742 Score = 37.0 bits (84), Expect = 0.017 Identities = 33/103 (32%), Positives = 43/103 (41%), Gaps = 10/103 (9%) Query: 36 TEPPGPKGAAPAAAAAAAGELLKFGVQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCS 95 T P P+GA AA AA F V +L F+S + V P+AP C+ Sbjct: 426 TVPAAPEGAG-AARPAAPLRPTSFSVLDILDPNKFNSR------RRRCVLLGPVAPAACA 478 Query: 96 GLSSALLAAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEPGTK 138 +SA A P A+G P EL+ R A G G G + Sbjct: 479 PCASAPCAPAPA---ASGRPPRAEELERRALAGAGGVGAAGAE 518 >gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] Length = 653 Score = 80.5 bits (197), Expect = 1e-15 Identities = 52/122 (42%), Positives = 67/122 (54%), Gaps = 6/122 (4%) Query: 106 PGLPGAAGAPHLPLELQLRGKLEAAGPGEPGT----KAKKGRRSRTVFTELQLMGLEKRF 161 PG PG A AP +G AA P T K+ K RR+RT FT QL+ LE +F Sbjct: 58 PGPPGGAAAPG-GAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKF 116 Query: 162 EKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNS 221 + +YLS +R++LA SL L++ QVK W+QNRR KWKK G +PT G P + Sbjct: 117 KATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK-QNPGADTSAPTGGGGGPGPGA 175 Query: 222 IP 223 P Sbjct: 176 GP 177 >gi|149588930 gastrulation brain homeo box 1 [Homo sapiens] Length = 363 Score = 80.1 bits (196), Expect = 2e-15 Identities = 51/121 (42%), Positives = 66/121 (54%), Gaps = 7/121 (5%) Query: 102 LAAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEPGTKAK--KGRRSRTVFTELQLMGLEK 159 L + G PGA P L+ L E P G A K RR RT FT QL+ LEK Sbjct: 219 LDSSAGGPGALLGPKPKLKGSLGTGAEEGAPVTAGVTAPGGKSRRRRTAFTSEQLLELEK 278 Query: 160 RFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKK 219 F +KYLS +R +A +L LS++QVK W+QNRR KWK+I + G + S + G P + Sbjct: 279 EFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRI--KAGNVSSRS---GEPVR 333 Query: 220 N 220 N Sbjct: 334 N 334 >gi|148613882 homeobox A4 [Homo sapiens] Length = 320 Score = 79.7 bits (195), Expect = 2e-15 Identities = 70/214 (32%), Positives = 90/214 (42%), Gaps = 37/214 (17%) Query: 2 QRPGEPGAARFGPPEGCADHR-PHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKFG 60 + P P AA + P G AD P+ YR PP P+ A A G Sbjct: 80 REPAYPAAALY-PAHGAADTAYPYGYRGGASPG---RPPQPEQPPAQAKGPAHG------ 129 Query: 61 VQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAGPGLPGAAGAPHLPL- 119 L A+ L +A P AP C A PG+P AP PL Sbjct: 130 ---LHASHVLQPQLPPPLQPRAVP---PAAPRRCEAAP-----ATPGVPAGGSAPACPLL 178 Query: 120 -----ELQLRGKLEAAGPG---------EPGTKAKKGRRSRTVFTELQLMGLEKRFEKQK 165 L L+GK P P + +RSRT +T Q++ LEK F + Sbjct: 179 LADKSPLGLKGKEPVVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNR 238 Query: 166 YLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKK 199 YL+ RI++A +L LS+ QVK W+QNRRMKWKK Sbjct: 239 YLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 272 >gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens] Length = 330 Score = 79.7 bits (195), Expect = 2e-15 Identities = 65/202 (32%), Positives = 91/202 (45%), Gaps = 31/202 (15%) Query: 4 PGEP----GAARFGPPEGCADHRPHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKF 59 PG P GA GP G S+ + L PGP G ++ AG L Sbjct: 82 PGGPAGGGGACSMGPLTG----------SYNVNMALAGGPGPGGGG--GSSGGAGALSAA 129 Query: 60 GVQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAGPGLPGAAGAPHLPL 119 GV + A RP +A + + P P A PG+ G + Sbjct: 130 GVIRVPAHRPLAGAVAHPQPLATGLPTVPSVP------------AMPGVNNLTGLTFPWM 177 Query: 120 ELQLRGKLE--AAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAE 177 E R + P + T KK ++ RT FT LQ+ LEKRF +QKYL++ +R LA+ Sbjct: 178 ESNRRYTKDRFTGHPYQNRTPPKK-KKPRTSFTRLQICELEKRFHRQKYLASAERAALAK 236 Query: 178 SLGLSQLQVKTWYQNRRMKWKK 199 +L ++ QVKTW+QNRR KW++ Sbjct: 237 ALKMTDAQVKTWFQNRRTKWRR 258 >gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] Length = 411 Score = 79.3 bits (194), Expect = 3e-15 Identities = 67/196 (34%), Positives = 90/196 (45%), Gaps = 11/196 (5%) Query: 32 EEILTEPPGPKGAAPAAAAAAAGELLKFGVQALLAARPFHSHLAVLKAEQAAVFKFPLAP 91 +E+ + + AP AA E + G L A A A A AP Sbjct: 151 DEVPDDEDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASPGATVDEAAAP 210 Query: 92 LGCSGLSSALLAAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEPGT----KAKKGRRSRT 147 ++ +A GP PG A AP +G AA P T K+ K RR+RT Sbjct: 211 ---GPRENSPVAQGP--PGGAAAPG-GAGTTPQGTATAAKPKRKRTGSDSKSGKPRRART 264 Query: 148 VFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGL 207 FT QL+ LE +F+ +YLS +R++LA SL L++ QVK W+QNRR KWKK G Sbjct: 265 AFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK-QNPGADT 323 Query: 208 ESPTKPKGRPKKNSIP 223 +PT G P + P Sbjct: 324 SAPTGGGGGPGPGAGP 339 Score = 37.0 bits (84), Expect = 0.017 Identities = 33/103 (32%), Positives = 43/103 (41%), Gaps = 10/103 (9%) Query: 36 TEPPGPKGAAPAAAAAAAGELLKFGVQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCS 95 T P P+GA AA AA F V +L F+S + V P+AP C+ Sbjct: 23 TVPAAPEGAG-AARPAAPLRPTSFSVLDILDPNKFNSR------RRRCVLLGPVAPAACA 75 Query: 96 GLSSALLAAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEPGTK 138 +SA A P A+G P EL+ R A G G G + Sbjct: 76 PCASAPCAPAPA---ASGRPPRAEELERRALAGAGGVGAAGAE 115 >gi|82659115 distal-less homeobox 6 [Homo sapiens] Length = 265 Score = 79.0 bits (193), Expect = 4e-15 Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 4/112 (3%) Query: 138 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 197 K KK R+ RT+++ LQL L RF++ +YL+ P+R +LA SLGL+Q QVK W+QN+R K+ Sbjct: 135 KGKKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKF 194 Query: 198 KKIVLQGGGLESPTKPKG----RPKKNSIPTSEQLTEQERAKDAEKPAEVPG 245 KK++ QG +G P+ ++P ++ + + +PG Sbjct: 195 KKLLKQGSNPHESDPLQGSAALSPRSPALPPVWDVSASAKGVSMPPNSYMPG 246 >gi|20143962 distal-less homeobox 4 isoform a [Homo sapiens] Length = 240 Score = 79.0 bits (193), Expect = 4e-15 Identities = 69/201 (34%), Positives = 94/201 (46%), Gaps = 26/201 (12%) Query: 45 APAAAAAAAGELLKFGVQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAA 104 AP + AAA L G+ AA P S+ + + P P G S LS AA Sbjct: 22 APVPSVAAAYPL---GLSPTTAASPNLSYSRPYGHLLSYPYTEPANP-GDSYLSCQQPAA 77 Query: 105 GPGLPGAAGAPHLPLELQLRGKLEAAGPG----EPGTKAKKGRRSRTVFTELQLMGLEKR 160 P A H P EL+ + P P AKK R+ RT+++ LQL L +R Sbjct: 78 -LSQPLCGPAEH-PQELEADSEKPRLSPEPSERRPQAPAKKLRKPRTIYSSLQLQHLNQR 135 Query: 161 FEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLE-----------S 209 F+ +YL+ P+R LA LGL+Q QVK W+QN+R K+KK++ Q G + S Sbjct: 136 FQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYKKLLKQNSGGQEGDFPGRTFSVS 195 Query: 210 PTKPK-----GRPKKNSIPTS 225 P P PK ++PTS Sbjct: 196 PCSPPLPSLWDLPKAGTLPTS 216 >gi|20143960 distal-less homeobox 4 isoform b [Homo sapiens] Length = 168 Score = 78.2 bits (191), Expect = 6e-15 Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 16/107 (14%) Query: 135 PGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRR 194 P AKK R+ RT+++ LQL L +RF+ +YL+ P+R LA LGL+Q QVK W+QN+R Sbjct: 38 PQAPAKKLRKPRTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKR 97 Query: 195 MKWKKIVLQGGGLE-----------SPTKPK-----GRPKKNSIPTS 225 K+KK++ Q G + SP P PK ++PTS Sbjct: 98 SKYKKLLKQNSGGQEGDFPGRTFSVSPCSPPLPSLWDLPKAGTLPTS 144 >gi|4885187 distal-less homeobox 5 [Homo sapiens] Length = 289 Score = 77.4 bits (189), Expect = 1e-14 Identities = 35/67 (52%), Positives = 50/67 (74%) Query: 138 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 197 K KK R+ RT+++ QL L++RF+K +YL+ P+R +LA SLGL+Q QVK W+QN+R K Sbjct: 133 KPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKRSKI 192 Query: 198 KKIVLQG 204 KKI+ G Sbjct: 193 KKIMKNG 199 >gi|4758168 distal-less homeobox 2 [Homo sapiens] Length = 328 Score = 77.4 bits (189), Expect = 1e-14 Identities = 35/67 (52%), Positives = 50/67 (74%) Query: 138 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 197 K KK R+ RT+++ QL L++RF+K +YL+ P+R +LA SLGL+Q QVK W+QNRR K+ Sbjct: 148 KPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSKF 207 Query: 198 KKIVLQG 204 KK+ G Sbjct: 208 KKMWKSG 214 >gi|45593144 gastrulation brain homeo box 2 [Homo sapiens] Length = 348 Score = 77.4 bits (189), Expect = 1e-14 Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 2/95 (2%) Query: 129 AAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKT 188 ++G T K RR RT FT QL+ LEK F +KYLS +R +A +L LS++QVK Sbjct: 234 SSGAAGSTTSTGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKI 293 Query: 189 WYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNSIP 223 W+QNRR KWK++ + G S T R K +P Sbjct: 294 WFQNRRAKWKRV--KAGNANSKTGEPSRNPKIVVP 326 >gi|4885185 distal-less homeobox 3 [Homo sapiens] Length = 287 Score = 76.6 bits (187), Expect = 2e-14 Identities = 34/67 (50%), Positives = 49/67 (73%) Query: 138 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 197 K KK R+ RT+++ QL L++RF+K +YL+ P+R +LA LGL+Q QVK W+QNRR K+ Sbjct: 125 KPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKF 184 Query: 198 KKIVLQG 204 KK+ G Sbjct: 185 KKLYKNG 191 >gi|27886557 msh homeobox 2 [Homo sapiens] Length = 267 Score = 76.6 bits (187), Expect = 2e-14 Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 28/194 (14%) Query: 13 GPPEGCADHRPHRYRS--FMIEEILTEPPGPKGAAPAAA-AAAAGELLKFGVQALLAARP 69 G EG A+ R + S F +E ++++ PK A+P A +A+AG L+ + + AR Sbjct: 29 GGAEGAAEERRVKVSSLPFSVEALMSDKKPPKEASPLPAESASAGATLRPLLLSGHGARE 88 Query: 70 FHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAGPGLPGAAGAP--HL-PLELQLRGK 126 HS ++K + A K + G + + PG P H+ P LR Sbjct: 89 AHSPGPLVKPFETASVKSENSEDGAAWMQE---------PGRYSPPPRHMSPTTCTLR-- 137 Query: 127 LEAAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQV 186 K K R+ RT FT QL+ LE++F +++YLS +R + + SL L++ QV Sbjct: 138 -----------KHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQV 186 Query: 187 KTWYQNRRMKWKKI 200 K W+QNRR K K++ Sbjct: 187 KIWFQNRRAKAKRL 200 >gi|226437602 NK1 homeobox 2 [Homo sapiens] Length = 310 Score = 76.3 bits (186), Expect = 2e-14 Identities = 46/108 (42%), Positives = 59/108 (54%), Gaps = 11/108 (10%) Query: 102 LAAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEPGT----------KAKKGRRSRTVFTE 151 LA P P A A P E G + + PG PG+ K RR+RT FT Sbjct: 114 LARSPDAPAGALASGEPCEDGGGGPVRSP-PGSPGSPRPRRRRLEPNCAKPRRARTAFTY 172 Query: 152 LQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKK 199 QL+ LE +F +YLS +R++LA SL L++ QVK W+QNRR KWKK Sbjct: 173 EQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 220 >gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens] Length = 332 Score = 76.3 bits (186), Expect = 2e-14 Identities = 46/108 (42%), Positives = 59/108 (54%), Gaps = 11/108 (10%) Query: 102 LAAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEPGT----------KAKKGRRSRTVFTE 151 LA P P A A P E G + + PG PG+ K RR+RT FT Sbjct: 136 LARSPDAPAGALASGEPCEDGGGGPVRSP-PGSPGSPRPRRRRLEPNCAKPRRARTAFTY 194 Query: 152 LQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKK 199 QL+ LE +F +YLS +R++LA SL L++ QVK W+QNRR KWKK Sbjct: 195 EQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 242 >gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens] Length = 332 Score = 76.3 bits (186), Expect = 2e-14 Identities = 46/108 (42%), Positives = 59/108 (54%), Gaps = 11/108 (10%) Query: 102 LAAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEPGT----------KAKKGRRSRTVFTE 151 LA P P A A P E G + + PG PG+ K RR+RT FT Sbjct: 136 LARSPDAPAGALASGEPCEDGGGGPVRSP-PGSPGSPRPRRRRLEPNCAKPRRARTAFTY 194 Query: 152 LQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKK 199 QL+ LE +F +YLS +R++LA SL L++ QVK W+QNRR KWKK Sbjct: 195 EQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 242 >gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens] Length = 332 Score = 76.3 bits (186), Expect = 2e-14 Identities = 46/108 (42%), Positives = 59/108 (54%), Gaps = 11/108 (10%) Query: 102 LAAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEPGT----------KAKKGRRSRTVFTE 151 LA P P A A P E G + + PG PG+ K RR+RT FT Sbjct: 136 LARSPDAPAGALASGEPCEDGGGGPVRSP-PGSPGSPRPRRRRLEPNCAKPRRARTAFTY 194 Query: 152 LQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKK 199 QL+ LE +F +YLS +R++LA SL L++ QVK W+QNRR KWKK Sbjct: 195 EQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 242 >gi|111120318 NK6 transcription factor related, locus 1 [Homo sapiens] Length = 367 Score = 75.1 bits (183), Expect = 6e-14 Identities = 58/164 (35%), Positives = 75/164 (45%), Gaps = 14/164 (8%) Query: 44 AAPAAAAAAAGELLKFGVQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLA 103 A+ AAAAAAA LLA P S L+ F A + G LA Sbjct: 136 ASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGRYPKPLA 195 Query: 104 AGPGL-----PGAAGAPHLPLELQLRGKLEAAGPGEPGT---KAKKGRRSRTVFTELQLM 155 PG PG +P R A P + K K + +R F+ Q+ Sbjct: 196 ELPGRTPIFWPGVMQSP------PWRDARLACTPHQGSILLDKDGKRKHTRPTFSGQQIF 249 Query: 156 GLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKK 199 LEK FE+ KYL+ P+R LA SLG+++ QVK W+QNRR KW+K Sbjct: 250 ALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRK 293 >gi|94536800 empty spiracles homolog 1 [Homo sapiens] Length = 290 Score = 73.9 bits (180), Expect = 1e-13 Identities = 65/186 (34%), Positives = 85/186 (45%), Gaps = 36/186 (19%) Query: 46 PAAAAAAAGELLKFGVQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAG 105 PAAAAA AG L G + + H L V A Q L A Sbjct: 100 PAAAAAGAGRSLYGGPELVFPEAMNHPALTVHPAHQ--------------------LGAS 139 Query: 106 PGLPGAA--GAPH------LPLELQLR---GKLEAAGPGEPGTK-----AKKGRRSRTVF 149 P P + GA H P L+ R + +A+ + G A+K +R RT F Sbjct: 140 PLQPPHSFFGAQHRDPLHFYPWVLRNRFFGHRFQASDVPQDGLLLHGPFARKPKRIRTAF 199 Query: 150 TELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLES 209 + QL+ LE+ FEK Y+ +R LA SL LS+ QVK W+QNRR K+K+ L+ G ES Sbjct: 200 SPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQKLEEEGPES 259 Query: 210 PTKPKG 215 K KG Sbjct: 260 EQKKKG 265 >gi|116174748 developing brain homeobox 2 [Homo sapiens] Length = 339 Score = 73.6 bits (179), Expect = 2e-13 Identities = 35/65 (53%), Positives = 46/65 (70%) Query: 134 EPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNR 193 + +KA++G R VF+E Q LEK F+KQKY+S DR LA +LGL + QVK W+QNR Sbjct: 178 DSNSKARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNR 237 Query: 194 RMKWK 198 RMKW+ Sbjct: 238 RMKWR 242 >gi|13273315 homeobox B4 [Homo sapiens] Length = 251 Score = 72.8 bits (177), Expect = 3e-13 Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 7/90 (7%) Query: 135 PGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRR 194 P + +RSRT +T Q++ LEK F +YL+ R+++A +L LS+ Q+K W+QNRR Sbjct: 155 PNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRR 214 Query: 195 MKWKK-------IVLQGGGLESPTKPKGRP 217 MKWKK + GG S P GRP Sbjct: 215 MKWKKDHKLPNTKIRSGGAAGSAGGPPGRP 244 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.313 0.133 0.391 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,089,140 Number of Sequences: 37866 Number of extensions: 654356 Number of successful extensions: 4516 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 280 Number of HSP's successfully gapped in prelim test: 178 Number of HSP's that attempted gapping in prelim test: 3062 Number of HSP's gapped (non-prelim): 1505 length of query: 254 length of database: 18,247,518 effective HSP length: 100 effective length of query: 154 effective length of database: 14,460,918 effective search space: 2226981372 effective search space used: 2226981372 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.