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Search of human proteins with 153218470
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|153218470 BarH-like homeobox 1 [Homo sapiens]
(254 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|153218470 BarH-like homeobox 1 [Homo sapiens] 511 e-145
gi|6633798 BarH-like homeobox 2 [Homo sapiens] 167 8e-42
gi|147901462 brain specific homeobox [Homo sapiens] 95 7e-20
gi|89257348 homeo box HB9 [Homo sapiens] 86 4e-17
gi|39930383 BarH-like homeobox 2 [Homo sapiens] 85 5e-17
gi|14149728 BarH-like homeobox 1 [Homo sapiens] 85 7e-17
gi|64225290 distal-less homeobox 1 isoform 1 [Homo sapiens] 84 1e-16
gi|11386181 H2.0-like homeobox [Homo sapiens] 82 3e-16
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 80 1e-15
gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens] 80 1e-15
gi|149588930 gastrulation brain homeo box 1 [Homo sapiens] 80 2e-15
gi|148613882 homeobox A4 [Homo sapiens] 80 2e-15
gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens] 80 2e-15
gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens] 79 3e-15
gi|82659115 distal-less homeobox 6 [Homo sapiens] 79 4e-15
gi|20143962 distal-less homeobox 4 isoform a [Homo sapiens] 79 4e-15
gi|20143960 distal-less homeobox 4 isoform b [Homo sapiens] 78 6e-15
gi|4885187 distal-less homeobox 5 [Homo sapiens] 77 1e-14
gi|4758168 distal-less homeobox 2 [Homo sapiens] 77 1e-14
gi|45593144 gastrulation brain homeo box 2 [Homo sapiens] 77 1e-14
gi|4885185 distal-less homeobox 3 [Homo sapiens] 77 2e-14
gi|27886557 msh homeobox 2 [Homo sapiens] 77 2e-14
gi|226437602 NK1 homeobox 2 [Homo sapiens] 76 2e-14
gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens] 76 2e-14
gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens] 76 2e-14
gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens] 76 2e-14
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 75 6e-14
gi|94536800 empty spiracles homolog 1 [Homo sapiens] 74 1e-13
gi|116174748 developing brain homeobox 2 [Homo sapiens] 74 2e-13
gi|13273315 homeobox B4 [Homo sapiens] 73 3e-13
>gi|153218470 BarH-like homeobox 1 [Homo sapiens]
Length = 254
Score = 511 bits (1317), Expect = e-145
Identities = 254/254 (100%), Positives = 254/254 (100%)
Query: 1 MQRPGEPGAARFGPPEGCADHRPHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKFG 60
MQRPGEPGAARFGPPEGCADHRPHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKFG
Sbjct: 1 MQRPGEPGAARFGPPEGCADHRPHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKFG 60
Query: 61 VQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAGPGLPGAAGAPHLPLE 120
VQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAGPGLPGAAGAPHLPLE
Sbjct: 61 VQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAGPGLPGAAGAPHLPLE 120
Query: 121 LQLRGKLEAAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLG 180
LQLRGKLEAAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLG
Sbjct: 121 LQLRGKLEAAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLG 180
Query: 181 LSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNSIPTSEQLTEQERAKDAEKP 240
LSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNSIPTSEQLTEQERAKDAEKP
Sbjct: 181 LSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNSIPTSEQLTEQERAKDAEKP 240
Query: 241 AEVPGEPSDRSRED 254
AEVPGEPSDRSRED
Sbjct: 241 AEVPGEPSDRSRED 254
>gi|6633798 BarH-like homeobox 2 [Homo sapiens]
Length = 279
Score = 167 bits (423), Expect = 8e-42
Identities = 114/267 (42%), Positives = 147/267 (55%), Gaps = 47/267 (17%)
Query: 1 MQRPGEPGAARFGPPEGCADHRPHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKFG 60
+ PG+ AAR RY++FMI+EIL++ +L +
Sbjct: 9 LSSPGQLKAAR------------RRYKTFMIDEILSKE----------TCDYFEKLSLYS 46
Query: 61 VQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSG--LSSALLAAGPGLPGAAGAPHLP 118
V L RP H A +PL + + S L+ A PG+ A
Sbjct: 47 VCPSLVVRPKPLHSCTGSPSLRA---YPLLSVITRQPTVISHLVPATPGIAQALSCH--- 100
Query: 119 LELQLRGKLEAAGPG------------EPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKY 166
Q+ + A PG +P + KK RRSRT+FTELQLMGLEK+F+KQKY
Sbjct: 101 ---QVTEAVSAEAPGGEALASSESETEQPTPRQKKPRRSRTIFTELQLMGLEKKFQKQKY 157
Query: 167 LSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNSIPTSE 226
LSTPDR+DLA+SLGL+QLQVKTWYQNRRMKWKK+VL+ GG E+PTKPKGRPKKNSIPTSE
Sbjct: 158 LSTPDRLDLAQSLGLTQLQVKTWYQNRRMKWKKMVLK-GGQEAPTKPKGRPKKNSIPTSE 216
Query: 227 QLTEQERAKDAEKPAEVPGEPSDRSRE 253
++ E E +++ + EPS E
Sbjct: 217 EI-EAEEKMNSQAQGQEQLEPSQGQEE 242
>gi|147901462 brain specific homeobox [Homo sapiens]
Length = 233
Score = 94.7 bits (234), Expect = 7e-20
Identities = 82/247 (33%), Positives = 111/247 (44%), Gaps = 56/247 (22%)
Query: 25 RYRSFMIEEILTEPPGP-KGAAP---AAAAAAAGELLKFG-----VQALLAARPFHSHLA 75
R SF IE+IL P P + AP A++ A+ LL +G LLA H
Sbjct: 16 RPTSFFIEDILLHKPKPLREVAPDHFASSLASRVPLLDYGYPLMPTPTLLAPHAHH---- 71
Query: 76 VLKAEQAAVFKFPLAPLGCSGLSSALLAAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEP 135
PL G+P A PH P +L GK
Sbjct: 72 ---------------PLHKGDHHHPYFLTTSGMPVPALFPH-PQHAELPGK--------- 106
Query: 136 GTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRM 195
+ R++RTVF++ QL GLEKRFE Q+YLSTP+R++LA +L LS+ QVKTW+QNRRM
Sbjct: 107 ---HCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRM 163
Query: 196 KWKKIVLQG----GGLESPTKPKGRPKKNSIPTSEQ-----------LTEQERAKDAEKP 240
K KK + + + P P+G P+ + T+ + LTE E D
Sbjct: 164 KHKKQLRKSQDEPKAPDGPESPEGSPRGSEAATAAEARLSLPAGPFVLTEPEDEVDIGDE 223
Query: 241 AEVPGEP 247
E+ P
Sbjct: 224 GELGSGP 230
>gi|89257348 homeo box HB9 [Homo sapiens]
Length = 401
Score = 85.5 bits (210), Expect = 4e-17
Identities = 76/224 (33%), Positives = 103/224 (45%), Gaps = 41/224 (18%)
Query: 1 MQRPGEPGAARFGPPEGCADHRPHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKFG 60
+ +PG GA G G PH + PG AA AAAAAAA L G
Sbjct: 91 LPKPGFLGAGGGGGGTGGGHGGPHHHAH----------PGAAAAAAAAAAAAAAGGLALG 140
Query: 61 VQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAGPGL----PGAAGA-- 114
+ P + QAA++ P+ + ++AL P L P GA
Sbjct: 141 LH------PGGAQGGAGLPAQAALYGHPVYGYSAAAAAAALAGQHPALSYSYPQVQGAHP 194
Query: 115 --PHLPLEL-----QLRGKLEAAGPG-------EPGTKAK-----KGRRSRTVFTELQLM 155
P P++L QL L A+ G + ++A+ K RR RT FT QL+
Sbjct: 195 AHPADPIKLGAGTFQLDQWLRASTAGMILPKMPDFNSQAQSNLLGKCRRPRTAFTSQQLL 254
Query: 156 GLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKK 199
LE +F+ KYLS P R ++A SL L++ QVK W+QNRRMKWK+
Sbjct: 255 ELEHQFKLNKYLSRPKRFEVATSLMLTETQVKIWFQNRRMKWKR 298
>gi|39930383 BarH-like homeobox 2 [Homo sapiens]
Length = 387
Score = 85.1 bits (209), Expect = 5e-17
Identities = 39/65 (60%), Positives = 50/65 (76%)
Query: 135 PGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRR 194
P +AKK R++RT F++ QL LE+ FE+QKYLS DR+DLA +L L+ QVKTWYQNRR
Sbjct: 225 PPVRAKKPRKARTAFSDHQLNQLERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRR 284
Query: 195 MKWKK 199
KWK+
Sbjct: 285 TKWKR 289
>gi|14149728 BarH-like homeobox 1 [Homo sapiens]
Length = 327
Score = 84.7 bits (208), Expect = 7e-17
Identities = 39/65 (60%), Positives = 49/65 (75%)
Query: 135 PGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRR 194
P + KK R++RT FT+ QL LE+ FE+QKYLS DR++LA SL L+ QVKTWYQNRR
Sbjct: 171 PPVRLKKPRKARTAFTDHQLAQLERSFERQKYLSVQDRMELAASLNLTDTQVKTWYQNRR 230
Query: 195 MKWKK 199
KWK+
Sbjct: 231 TKWKR 235
>gi|64225290 distal-less homeobox 1 isoform 1 [Homo sapiens]
Length = 255
Score = 84.0 bits (206), Expect = 1e-16
Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 87 FPLAPLGCSGLSSALLAAGPGLPGAAGAPHLPLEL----QLRGKLEAAGPGEPGTKAKKG 142
+P S SS +++ PG+A LE + + G K KK
Sbjct: 69 YPYVNSVSSHASSPYISSVQSYPGSASLAQSRLEDPGADSEKSTVVEGGEVRFNGKGKKI 128
Query: 143 RRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVL 202
R+ RT+++ LQL L +RF++ +YL+ P+R +LA SLGL+Q QVK W+QN+R K+KK++
Sbjct: 129 RKPRTIYSSLQLQALNRRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKFKKLMK 188
Query: 203 QGG-GLESPTKPKGR 216
QGG LE GR
Sbjct: 189 QGGAALEGSALANGR 203
>gi|11386181 H2.0-like homeobox [Homo sapiens]
Length = 488
Score = 82.4 bits (202), Expect = 3e-16
Identities = 48/120 (40%), Positives = 61/120 (50%), Gaps = 3/120 (2%)
Query: 135 PGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRR 194
P T +K SR VF+ LQ GLEKRFE QKY++ PDR LA LGL+ QVK W+QNRR
Sbjct: 269 PQTYKRKRSWSRAVFSNLQRKGLEKRFEIQKYVTKPDRKQLAAMLGLTDAQVKVWFQNRR 328
Query: 195 MKWKKIVLQGGGLESPTKPKGRPKKNSIPTSEQLTEQERAKDAEKPAEVPGEPSDRSRED 254
MKW+ + + K G P ++ EQ+ + E E SD D
Sbjct: 329 MKWRH-SKEAQAQKDKDKEAGEKPSGGAPAAD--GEQDERSPSRSEGEAESESSDSESLD 385
>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 814
Score = 80.5 bits (197), Expect = 1e-15
Identities = 52/122 (42%), Positives = 67/122 (54%), Gaps = 6/122 (4%)
Query: 106 PGLPGAAGAPHLPLELQLRGKLEAAGPGEPGT----KAKKGRRSRTVFTELQLMGLEKRF 161
PG PG A AP +G AA P T K+ K RR+RT FT QL+ LE +F
Sbjct: 623 PGPPGGAAAPG-GAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKF 681
Query: 162 EKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNS 221
+ +YLS +R++LA SL L++ QVK W+QNRR KWKK G +PT G P +
Sbjct: 682 KATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK-QNPGADTSAPTGGGGGPGPGA 740
Query: 222 IP 223
P
Sbjct: 741 GP 742
Score = 37.0 bits (84), Expect = 0.017
Identities = 33/103 (32%), Positives = 43/103 (41%), Gaps = 10/103 (9%)
Query: 36 TEPPGPKGAAPAAAAAAAGELLKFGVQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCS 95
T P P+GA AA AA F V +L F+S + V P+AP C+
Sbjct: 426 TVPAAPEGAG-AARPAAPLRPTSFSVLDILDPNKFNSR------RRRCVLLGPVAPAACA 478
Query: 96 GLSSALLAAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEPGTK 138
+SA A P A+G P EL+ R A G G G +
Sbjct: 479 PCASAPCAPAPA---ASGRPPRAEELERRALAGAGGVGAAGAE 518
>gi|239748344 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 653
Score = 80.5 bits (197), Expect = 1e-15
Identities = 52/122 (42%), Positives = 67/122 (54%), Gaps = 6/122 (4%)
Query: 106 PGLPGAAGAPHLPLELQLRGKLEAAGPGEPGT----KAKKGRRSRTVFTELQLMGLEKRF 161
PG PG A AP +G AA P T K+ K RR+RT FT QL+ LE +F
Sbjct: 58 PGPPGGAAAPG-GAGTTPQGTATAAKPKRKRTGSDSKSGKPRRARTAFTYEQLVALENKF 116
Query: 162 EKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNS 221
+ +YLS +R++LA SL L++ QVK W+QNRR KWKK G +PT G P +
Sbjct: 117 KATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK-QNPGADTSAPTGGGGGPGPGA 175
Query: 222 IP 223
P
Sbjct: 176 GP 177
>gi|149588930 gastrulation brain homeo box 1 [Homo sapiens]
Length = 363
Score = 80.1 bits (196), Expect = 2e-15
Identities = 51/121 (42%), Positives = 66/121 (54%), Gaps = 7/121 (5%)
Query: 102 LAAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEPGTKAK--KGRRSRTVFTELQLMGLEK 159
L + G PGA P L+ L E P G A K RR RT FT QL+ LEK
Sbjct: 219 LDSSAGGPGALLGPKPKLKGSLGTGAEEGAPVTAGVTAPGGKSRRRRTAFTSEQLLELEK 278
Query: 160 RFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKK 219
F +KYLS +R +A +L LS++QVK W+QNRR KWK+I + G + S + G P +
Sbjct: 279 EFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRI--KAGNVSSRS---GEPVR 333
Query: 220 N 220
N
Sbjct: 334 N 334
>gi|148613882 homeobox A4 [Homo sapiens]
Length = 320
Score = 79.7 bits (195), Expect = 2e-15
Identities = 70/214 (32%), Positives = 90/214 (42%), Gaps = 37/214 (17%)
Query: 2 QRPGEPGAARFGPPEGCADHR-PHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKFG 60
+ P P AA + P G AD P+ YR PP P+ A A G
Sbjct: 80 REPAYPAAALY-PAHGAADTAYPYGYRGGASPG---RPPQPEQPPAQAKGPAHG------ 129
Query: 61 VQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAGPGLPGAAGAPHLPL- 119
L A+ L +A P AP C A PG+P AP PL
Sbjct: 130 ---LHASHVLQPQLPPPLQPRAVP---PAAPRRCEAAP-----ATPGVPAGGSAPACPLL 178
Query: 120 -----ELQLRGKLEAAGPG---------EPGTKAKKGRRSRTVFTELQLMGLEKRFEKQK 165
L L+GK P P + +RSRT +T Q++ LEK F +
Sbjct: 179 LADKSPLGLKGKEPVVYPWMKKIHVSAVNPSYNGGEPKRSRTAYTRQQVLELEKEFHFNR 238
Query: 166 YLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKK 199
YL+ RI++A +L LS+ QVK W+QNRRMKWKK
Sbjct: 239 YLTRRRRIEIAHTLCLSERQVKIWFQNRRMKWKK 272
>gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens]
Length = 330
Score = 79.7 bits (195), Expect = 2e-15
Identities = 65/202 (32%), Positives = 91/202 (45%), Gaps = 31/202 (15%)
Query: 4 PGEP----GAARFGPPEGCADHRPHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKF 59
PG P GA GP G S+ + L PGP G ++ AG L
Sbjct: 82 PGGPAGGGGACSMGPLTG----------SYNVNMALAGGPGPGGGG--GSSGGAGALSAA 129
Query: 60 GVQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAGPGLPGAAGAPHLPL 119
GV + A RP +A + + P P A PG+ G +
Sbjct: 130 GVIRVPAHRPLAGAVAHPQPLATGLPTVPSVP------------AMPGVNNLTGLTFPWM 177
Query: 120 ELQLRGKLE--AAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAE 177
E R + P + T KK ++ RT FT LQ+ LEKRF +QKYL++ +R LA+
Sbjct: 178 ESNRRYTKDRFTGHPYQNRTPPKK-KKPRTSFTRLQICELEKRFHRQKYLASAERAALAK 236
Query: 178 SLGLSQLQVKTWYQNRRMKWKK 199
+L ++ QVKTW+QNRR KW++
Sbjct: 237 ALKMTDAQVKTWFQNRRTKWRR 258
>gi|239742243 PREDICTED: HPX-153 homeobox [Homo sapiens]
Length = 411
Score = 79.3 bits (194), Expect = 3e-15
Identities = 67/196 (34%), Positives = 90/196 (45%), Gaps = 11/196 (5%)
Query: 32 EEILTEPPGPKGAAPAAAAAAAGELLKFGVQALLAARPFHSHLAVLKAEQAAVFKFPLAP 91
+E+ + + AP AA E + G L A A A A AP
Sbjct: 151 DEVPDDEDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDASPGATVDEAAAP 210
Query: 92 LGCSGLSSALLAAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEPGT----KAKKGRRSRT 147
++ +A GP PG A AP +G AA P T K+ K RR+RT
Sbjct: 211 ---GPRENSPVAQGP--PGGAAAPG-GAGTTPQGTATAAKPKRKRTGSDSKSGKPRRART 264
Query: 148 VFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGL 207
FT QL+ LE +F+ +YLS +R++LA SL L++ QVK W+QNRR KWKK G
Sbjct: 265 AFTYEQLVALENKFKATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK-QNPGADT 323
Query: 208 ESPTKPKGRPKKNSIP 223
+PT G P + P
Sbjct: 324 SAPTGGGGGPGPGAGP 339
Score = 37.0 bits (84), Expect = 0.017
Identities = 33/103 (32%), Positives = 43/103 (41%), Gaps = 10/103 (9%)
Query: 36 TEPPGPKGAAPAAAAAAAGELLKFGVQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCS 95
T P P+GA AA AA F V +L F+S + V P+AP C+
Sbjct: 23 TVPAAPEGAG-AARPAAPLRPTSFSVLDILDPNKFNSR------RRRCVLLGPVAPAACA 75
Query: 96 GLSSALLAAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEPGTK 138
+SA A P A+G P EL+ R A G G G +
Sbjct: 76 PCASAPCAPAPA---ASGRPPRAEELERRALAGAGGVGAAGAE 115
>gi|82659115 distal-less homeobox 6 [Homo sapiens]
Length = 265
Score = 79.0 bits (193), Expect = 4e-15
Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 4/112 (3%)
Query: 138 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 197
K KK R+ RT+++ LQL L RF++ +YL+ P+R +LA SLGL+Q QVK W+QN+R K+
Sbjct: 135 KGKKIRKPRTIYSSLQLQALNHRFQQTQYLALPERAELAASLGLTQTQVKIWFQNKRSKF 194
Query: 198 KKIVLQGGGLESPTKPKG----RPKKNSIPTSEQLTEQERAKDAEKPAEVPG 245
KK++ QG +G P+ ++P ++ + + +PG
Sbjct: 195 KKLLKQGSNPHESDPLQGSAALSPRSPALPPVWDVSASAKGVSMPPNSYMPG 246
>gi|20143962 distal-less homeobox 4 isoform a [Homo sapiens]
Length = 240
Score = 79.0 bits (193), Expect = 4e-15
Identities = 69/201 (34%), Positives = 94/201 (46%), Gaps = 26/201 (12%)
Query: 45 APAAAAAAAGELLKFGVQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAA 104
AP + AAA L G+ AA P S+ + + P P G S LS AA
Sbjct: 22 APVPSVAAAYPL---GLSPTTAASPNLSYSRPYGHLLSYPYTEPANP-GDSYLSCQQPAA 77
Query: 105 GPGLPGAAGAPHLPLELQLRGKLEAAGPG----EPGTKAKKGRRSRTVFTELQLMGLEKR 160
P A H P EL+ + P P AKK R+ RT+++ LQL L +R
Sbjct: 78 -LSQPLCGPAEH-PQELEADSEKPRLSPEPSERRPQAPAKKLRKPRTIYSSLQLQHLNQR 135
Query: 161 FEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLE-----------S 209
F+ +YL+ P+R LA LGL+Q QVK W+QN+R K+KK++ Q G + S
Sbjct: 136 FQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKRSKYKKLLKQNSGGQEGDFPGRTFSVS 195
Query: 210 PTKPK-----GRPKKNSIPTS 225
P P PK ++PTS
Sbjct: 196 PCSPPLPSLWDLPKAGTLPTS 216
>gi|20143960 distal-less homeobox 4 isoform b [Homo sapiens]
Length = 168
Score = 78.2 bits (191), Expect = 6e-15
Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 16/107 (14%)
Query: 135 PGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRR 194
P AKK R+ RT+++ LQL L +RF+ +YL+ P+R LA LGL+Q QVK W+QN+R
Sbjct: 38 PQAPAKKLRKPRTIYSSLQLQHLNQRFQHTQYLALPERAQLAAQLGLTQTQVKIWFQNKR 97
Query: 195 MKWKKIVLQGGGLE-----------SPTKPK-----GRPKKNSIPTS 225
K+KK++ Q G + SP P PK ++PTS
Sbjct: 98 SKYKKLLKQNSGGQEGDFPGRTFSVSPCSPPLPSLWDLPKAGTLPTS 144
>gi|4885187 distal-less homeobox 5 [Homo sapiens]
Length = 289
Score = 77.4 bits (189), Expect = 1e-14
Identities = 35/67 (52%), Positives = 50/67 (74%)
Query: 138 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 197
K KK R+ RT+++ QL L++RF+K +YL+ P+R +LA SLGL+Q QVK W+QN+R K
Sbjct: 133 KPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNKRSKI 192
Query: 198 KKIVLQG 204
KKI+ G
Sbjct: 193 KKIMKNG 199
>gi|4758168 distal-less homeobox 2 [Homo sapiens]
Length = 328
Score = 77.4 bits (189), Expect = 1e-14
Identities = 35/67 (52%), Positives = 50/67 (74%)
Query: 138 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 197
K KK R+ RT+++ QL L++RF+K +YL+ P+R +LA SLGL+Q QVK W+QNRR K+
Sbjct: 148 KPKKVRKPRTIYSSFQLAALQRRFQKTQYLALPERAELAASLGLTQTQVKIWFQNRRSKF 207
Query: 198 KKIVLQG 204
KK+ G
Sbjct: 208 KKMWKSG 214
>gi|45593144 gastrulation brain homeo box 2 [Homo sapiens]
Length = 348
Score = 77.4 bits (189), Expect = 1e-14
Identities = 41/95 (43%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 129 AAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKT 188
++G T K RR RT FT QL+ LEK F +KYLS +R +A +L LS++QVK
Sbjct: 234 SSGAAGSTTSTGKNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKI 293
Query: 189 WYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNSIP 223
W+QNRR KWK++ + G S T R K +P
Sbjct: 294 WFQNRRAKWKRV--KAGNANSKTGEPSRNPKIVVP 326
>gi|4885185 distal-less homeobox 3 [Homo sapiens]
Length = 287
Score = 76.6 bits (187), Expect = 2e-14
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 138 KAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKW 197
K KK R+ RT+++ QL L++RF+K +YL+ P+R +LA LGL+Q QVK W+QNRR K+
Sbjct: 125 KPKKVRKPRTIYSSYQLAALQRRFQKAQYLALPERAELAAQLGLTQTQVKIWFQNRRSKF 184
Query: 198 KKIVLQG 204
KK+ G
Sbjct: 185 KKLYKNG 191
>gi|27886557 msh homeobox 2 [Homo sapiens]
Length = 267
Score = 76.6 bits (187), Expect = 2e-14
Identities = 61/194 (31%), Positives = 96/194 (49%), Gaps = 28/194 (14%)
Query: 13 GPPEGCADHRPHRYRS--FMIEEILTEPPGPKGAAPAAA-AAAAGELLKFGVQALLAARP 69
G EG A+ R + S F +E ++++ PK A+P A +A+AG L+ + + AR
Sbjct: 29 GGAEGAAEERRVKVSSLPFSVEALMSDKKPPKEASPLPAESASAGATLRPLLLSGHGARE 88
Query: 70 FHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAGPGLPGAAGAP--HL-PLELQLRGK 126
HS ++K + A K + G + + PG P H+ P LR
Sbjct: 89 AHSPGPLVKPFETASVKSENSEDGAAWMQE---------PGRYSPPPRHMSPTTCTLR-- 137
Query: 127 LEAAGPGEPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQV 186
K K R+ RT FT QL+ LE++F +++YLS +R + + SL L++ QV
Sbjct: 138 -----------KHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQV 186
Query: 187 KTWYQNRRMKWKKI 200
K W+QNRR K K++
Sbjct: 187 KIWFQNRRAKAKRL 200
>gi|226437602 NK1 homeobox 2 [Homo sapiens]
Length = 310
Score = 76.3 bits (186), Expect = 2e-14
Identities = 46/108 (42%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Query: 102 LAAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEPGT----------KAKKGRRSRTVFTE 151
LA P P A A P E G + + PG PG+ K RR+RT FT
Sbjct: 114 LARSPDAPAGALASGEPCEDGGGGPVRSP-PGSPGSPRPRRRRLEPNCAKPRRARTAFTY 172
Query: 152 LQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKK 199
QL+ LE +F +YLS +R++LA SL L++ QVK W+QNRR KWKK
Sbjct: 173 EQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 220
>gi|239755439 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 76.3 bits (186), Expect = 2e-14
Identities = 46/108 (42%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Query: 102 LAAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEPGT----------KAKKGRRSRTVFTE 151
LA P P A A P E G + + PG PG+ K RR+RT FT
Sbjct: 136 LARSPDAPAGALASGEPCEDGGGGPVRSP-PGSPGSPRPRRRRLEPNCAKPRRARTAFTY 194
Query: 152 LQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKK 199
QL+ LE +F +YLS +R++LA SL L++ QVK W+QNRR KWKK
Sbjct: 195 EQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 242
>gi|239749920 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 76.3 bits (186), Expect = 2e-14
Identities = 46/108 (42%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Query: 102 LAAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEPGT----------KAKKGRRSRTVFTE 151
LA P P A A P E G + + PG PG+ K RR+RT FT
Sbjct: 136 LARSPDAPAGALASGEPCEDGGGGPVRSP-PGSPGSPRPRRRRLEPNCAKPRRARTAFTY 194
Query: 152 LQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKK 199
QL+ LE +F +YLS +R++LA SL L++ QVK W+QNRR KWKK
Sbjct: 195 EQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 242
>gi|239744223 PREDICTED: NK1 homeobox 2 [Homo sapiens]
Length = 332
Score = 76.3 bits (186), Expect = 2e-14
Identities = 46/108 (42%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Query: 102 LAAGPGLPGAAGAPHLPLELQLRGKLEAAGPGEPGT----------KAKKGRRSRTVFTE 151
LA P P A A P E G + + PG PG+ K RR+RT FT
Sbjct: 136 LARSPDAPAGALASGEPCEDGGGGPVRSP-PGSPGSPRPRRRRLEPNCAKPRRARTAFTY 194
Query: 152 LQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKK 199
QL+ LE +F +YLS +R++LA SL L++ QVK W+QNRR KWKK
Sbjct: 195 EQLVALENKFRATRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWKK 242
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 75.1 bits (183), Expect = 6e-14
Identities = 58/164 (35%), Positives = 75/164 (45%), Gaps = 14/164 (8%)
Query: 44 AAPAAAAAAAGELLKFGVQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLA 103
A+ AAAAAAA LLA P S L+ F A + G LA
Sbjct: 136 ASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPPPPPPGLYFSPSAAAVAAVGRYPKPLA 195
Query: 104 AGPGL-----PGAAGAPHLPLELQLRGKLEAAGPGEPGT---KAKKGRRSRTVFTELQLM 155
PG PG +P R A P + K K + +R F+ Q+
Sbjct: 196 ELPGRTPIFWPGVMQSP------PWRDARLACTPHQGSILLDKDGKRKHTRPTFSGQQIF 249
Query: 156 GLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKK 199
LEK FE+ KYL+ P+R LA SLG+++ QVK W+QNRR KW+K
Sbjct: 250 ALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRK 293
>gi|94536800 empty spiracles homolog 1 [Homo sapiens]
Length = 290
Score = 73.9 bits (180), Expect = 1e-13
Identities = 65/186 (34%), Positives = 85/186 (45%), Gaps = 36/186 (19%)
Query: 46 PAAAAAAAGELLKFGVQALLAARPFHSHLAVLKAEQAAVFKFPLAPLGCSGLSSALLAAG 105
PAAAAA AG L G + + H L V A Q L A
Sbjct: 100 PAAAAAGAGRSLYGGPELVFPEAMNHPALTVHPAHQ--------------------LGAS 139
Query: 106 PGLPGAA--GAPH------LPLELQLR---GKLEAAGPGEPGTK-----AKKGRRSRTVF 149
P P + GA H P L+ R + +A+ + G A+K +R RT F
Sbjct: 140 PLQPPHSFFGAQHRDPLHFYPWVLRNRFFGHRFQASDVPQDGLLLHGPFARKPKRIRTAF 199
Query: 150 TELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLES 209
+ QL+ LE+ FEK Y+ +R LA SL LS+ QVK W+QNRR K+K+ L+ G ES
Sbjct: 200 SPSQLLRLERAFEKNHYVVGAERKQLAGSLSLSETQVKVWFQNRRTKYKRQKLEEEGPES 259
Query: 210 PTKPKG 215
K KG
Sbjct: 260 EQKKKG 265
>gi|116174748 developing brain homeobox 2 [Homo sapiens]
Length = 339
Score = 73.6 bits (179), Expect = 2e-13
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 134 EPGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNR 193
+ +KA++G R VF+E Q LEK F+KQKY+S DR LA +LGL + QVK W+QNR
Sbjct: 178 DSNSKARRGILRRAVFSEDQRKALEKMFQKQKYISKTDRKKLAINLGLKESQVKIWFQNR 237
Query: 194 RMKWK 198
RMKW+
Sbjct: 238 RMKWR 242
>gi|13273315 homeobox B4 [Homo sapiens]
Length = 251
Score = 72.8 bits (177), Expect = 3e-13
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 135 PGTKAKKGRRSRTVFTELQLMGLEKRFEKQKYLSTPDRIDLAESLGLSQLQVKTWYQNRR 194
P + +RSRT +T Q++ LEK F +YL+ R+++A +L LS+ Q+K W+QNRR
Sbjct: 155 PNYAGGEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRR 214
Query: 195 MKWKK-------IVLQGGGLESPTKPKGRP 217
MKWKK + GG S P GRP
Sbjct: 215 MKWKKDHKLPNTKIRSGGAAGSAGGPPGRP 244
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.133 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,089,140
Number of Sequences: 37866
Number of extensions: 654356
Number of successful extensions: 4516
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 280
Number of HSP's successfully gapped in prelim test: 178
Number of HSP's that attempted gapping in prelim test: 3062
Number of HSP's gapped (non-prelim): 1505
length of query: 254
length of database: 18,247,518
effective HSP length: 100
effective length of query: 154
effective length of database: 14,460,918
effective search space: 2226981372
effective search space used: 2226981372
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.