Guide to the Human Genome
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Search of human proteins with 153070260

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|153070260 myristoylated alanine-rich protein kinase C
substrate [Homo sapiens]
         (332 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|153070260 myristoylated alanine-rich protein kinase C substra...   642   0.0  
gi|13491174 MARCKS-like 1 [Homo sapiens]                              110   2e-24
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]    101   8e-22
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]       79   6e-15
gi|30795231 brain abundant, membrane attached signal protein 1 [...    75   8e-14
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]              74   2e-13
gi|112821681 G protein-regulated inducer of neurite outgrowth 1 ...    73   3e-13
gi|122692281 hypothetical protein LOC645369 [Homo sapiens]             72   7e-13
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e...    71   2e-12
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d...    71   2e-12
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ...    71   2e-12
gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c ...    71   2e-12
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap...    70   2e-12
gi|27894378 chloride intracellular channel 6 [Homo sapiens]            69   4e-12
gi|149773456 hypothetical protein LOC643314 [Homo sapiens]             65   6e-11
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]         65   6e-11
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    65   8e-11
gi|117938759 GNAS complex locus XLas [Homo sapiens]                    64   2e-10
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa...    64   2e-10
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f...    62   5e-10
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ...    62   5e-10
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap...    62   9e-10
gi|194248057 growth associated protein 43 isoform 1 [Homo sapiens]     62   9e-10
gi|4503911 growth associated protein 43 isoform 2 [Homo sapiens]       62   9e-10
gi|13376611 zinc finger protein 703 [Homo sapiens]                     61   1e-09
gi|239754474 PREDICTED: similar to mucin [Homo sapiens]                61   1e-09
gi|154146231 DMRT-like family A2 [Homo sapiens]                        61   1e-09
gi|116256464 hypothetical protein LOC343990 [Homo sapiens]             61   1e-09
gi|157738619 smoothelin-like 1 [Homo sapiens]                          61   1e-09
gi|163965366 nascent polypeptide-associated complex alpha subuni...    60   3e-09

>gi|153070260 myristoylated alanine-rich protein kinase C substrate
           [Homo sapiens]
          Length = 332

 Score =  642 bits (1655), Expect = 0.0
 Identities = 332/332 (100%), Positives = 332/332 (100%)

Query: 1   MGAQFSKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQA 60
           MGAQFSKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQA
Sbjct: 1   MGAQFSKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQA 60

Query: 61  NGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPT 120
           NGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPT
Sbjct: 61  NGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPT 120

Query: 121 AAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGE 180
           AAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGE
Sbjct: 121 AAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGE 180

Query: 181 GGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQ 240
           GGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQ
Sbjct: 181 GGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQ 240

Query: 241 EAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEE 300
           EAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEE
Sbjct: 241 EAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEE 300

Query: 301 PAAAAASSACAAPSQEAQPECSPEAPPAEAAE 332
           PAAAAASSACAAPSQEAQPECSPEAPPAEAAE
Sbjct: 301 PAAAAASSACAAPSQEAQPECSPEAPPAEAAE 332


>gi|13491174 MARCKS-like 1 [Homo sapiens]
          Length = 195

 Score =  110 bits (275), Expect = 2e-24
 Identities = 91/265 (34%), Positives = 117/265 (44%), Gaps = 72/265 (27%)

Query: 1   MGAQFSKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQA 60
           MG+Q SK A +G+  AE     A  +SP+KANGQENGHVK NGD S              
Sbjct: 1   MGSQSSK-APRGDVTAEE----AAGASPAKANGQENGHVKSNGDLS-------------- 41

Query: 61  NGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPT 120
               P  + E P   G+  A+ +  +  EPA          P  + A A+GE        
Sbjct: 42  ----PKGEGESPPVNGTDEAAGATGDAIEPA----------PPSQGAEAKGEV------- 80

Query: 121 AAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGE 180
                                    P  ETPKKKKK FSFKK FKLSG SFK+N+KE G 
Sbjct: 81  -------------------------PPKETPKKKKK-FSFKKPFKLSGLSFKRNRKEGGG 114

Query: 181 GGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAP--GEEAAAGEEGAAGGDPQEAK 238
              A +P  E   ++  G   A + E  A  G+ AA P   E  A G E +A  + +EA 
Sbjct: 115 DSSASSPTEE---EQEQGEIGACSDEGTAQEGKAAATPESQEPQAKGAEASAASE-EEAG 170

Query: 239 PQEAAVAPEKPPASDETKAAEEPSK 263
           PQ    +    P S  T A+ E ++
Sbjct: 171 PQATEPSTPSGPESGPTPASAEQNE 195



 Score = 38.9 bits (89), Expect = 0.006
 Identities = 41/175 (23%), Positives = 71/175 (40%), Gaps = 30/175 (17%)

Query: 184 AEAPAAEGGKDEAAGGAAAAA--AEAG----------AASGEQAAAPGEEAAAGEEGAA- 230
           ++AP  +   +EAAG + A A   E G             GE     G + AAG  G A 
Sbjct: 6   SKAPRGDVTAEEAAGASPAKANGQENGHVKSNGDLSPKGEGESPPVNGTDEAAGATGDAI 65

Query: 231 -GGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVE----EKKAEEAGASAAAC------ 279
               P +    +  V P++ P   +  + ++P K+     ++  +E G  ++A       
Sbjct: 66  EPAPPSQGAEAKGEVPPKETPKKKKKFSFKKPFKLSGLSFKRNRKEGGGDSSASSPTEEE 125

Query: 280 ----EAPSAAGPGAPPEQEAA--PAEEPAAAAASSACAAPSQEAQPECSPEAPPA 328
               E  + +  G   E +AA  P  +   A  + A AA  +EA P+ +  + P+
Sbjct: 126 QEQGEIGACSDEGTAQEGKAAATPESQEPQAKGAEASAASEEEAGPQATEPSTPS 180



 Score = 36.6 bits (83), Expect = 0.032
 Identities = 45/161 (27%), Positives = 62/161 (38%), Gaps = 33/161 (20%)

Query: 173 KNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAA--PGEEAAAGEEGAA 230
           K+  +    GE E+P   G  DEAAG    A   A  + G +A    P +E    ++  +
Sbjct: 35  KSNGDLSPKGEGESPPVNG-TDEAAGATGDAIEPAPPSQGAEAKGEVPPKETPKKKKKFS 93

Query: 231 -------------------GGDPQEAKPQEAAV------APEKPPASDETKAAEEPSKVE 265
                              GGD   + P E         A      + E KAA  P   +
Sbjct: 94  FKKPFKLSGLSFKRNRKEGGGDSSASSPTEEEQEQGEIGACSDEGTAQEGKAAATPES-Q 152

Query: 266 EKKAEEAGASAAACE--APSAAGPGAPPEQEAAPAEEPAAA 304
           E +A+ A ASAA+ E   P A  P  P   E+ P   PA+A
Sbjct: 153 EPQAKGAEASAASEEEAGPQATEPSTPSGPESGPT--PASA 191


>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
          Length = 1020

 Score =  101 bits (252), Expect = 8e-22
 Identities = 109/368 (29%), Positives = 152/368 (41%), Gaps = 46/368 (12%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDA-SPAAAESGAKEELQANGSA 64
           ++ AA  E  A+ P +   A SP++A   E    K   +  SP  A+S AKEE ++   A
Sbjct: 506 AEEAASPEKEAKSPVKEE-AKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEA 564

Query: 65  PAADKEE---PAAAGS--GAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSP 119
            + +KEE   PA   S   A SP+  E   PA A +PE   SPV++EA +  EA  P   
Sbjct: 565 KSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKE 624

Query: 120 TAAEGEAASAASSTSSPKAEDGATP----SPSNETPKKKKKRFSFKKSFKLSGFSFKKN- 174
            A       +     SP  E+  +P    SP  E  K  +K  S  K+   S    K   
Sbjct: 625 EAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSPV 684

Query: 175 KKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDP 234
           K EA    +A++P  E  K       A +  +  A S E+A +P +E A   E A     
Sbjct: 685 KAEAKSPEKAKSPVKEEAKSPE---KAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVK 741

Query: 235 QEAKPQEAAVAPE------------KPPASDETKA--------AEEPSKVEEKKAEEA-- 272
           +EAK  E A +PE            K PA +E ++        A+ P K E K  E+A  
Sbjct: 742 EEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKS 801

Query: 273 ----GASAAACEAPSAAGPGAPPEQEAAP-----AEEPAAAAASSACAAPSQEAQPECSP 323
                A A   E P      +P ++E  P      E P  A    A A P  E + +   
Sbjct: 802 PLKEDAKAPEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKK 861

Query: 324 EAPPAEAA 331
           E  P + A
Sbjct: 862 EEAPKKEA 869



 Score = 85.9 bits (211), Expect = 5e-17
 Identities = 89/332 (26%), Positives = 128/332 (38%), Gaps = 30/332 (9%)

Query: 4   QFSKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGS 63
           Q  +T    E   E   EA       +  G+E        +     AE  A  E +A   
Sbjct: 460 QTEETQVTEEVTEEEEKEAKEEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSP 519

Query: 64  APAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAE 123
                 +E A + + A SP   E   PA   +PE   SP ++EA +  EA  P    A  
Sbjct: 520 V-----KEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKS 574

Query: 124 GEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGE 183
                +     SP  E+  +P+ + ++P+K K                   K+EA    E
Sbjct: 575 PAEVKSPEKAKSPAKEEAKSPAEA-KSPEKAKSPV----------------KEEAKSPAE 617

Query: 184 AEAPAAEGGKDEA---AGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQ 240
           A++P  E  K  A   +   A +  +  A S E+A +P +E A   E A      EAK  
Sbjct: 618 AKSPVKEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSP 677

Query: 241 EAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEA---AP 297
           E A +P K  A    K A+ P K EE K+ E   S    EA S     +P ++EA     
Sbjct: 678 EKAKSPVKAEAKSPEK-AKSPVK-EEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEK 735

Query: 298 AEEPAAAAASSACAAPSQEAQPECSPEAPPAE 329
           A+ P    A S   A S E       ++P A+
Sbjct: 736 AKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAK 767



 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 93/345 (26%), Positives = 136/345 (39%), Gaps = 41/345 (11%)

Query: 6    SKTAAKGEAAAERPGEAAV---ASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANG 62
            +K+  K EA +    ++ V   A SP KA        K     +P  A+S  KEE ++  
Sbjct: 694  AKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAK-----TPEKAKSPVKEEAKSPE 748

Query: 63   SAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAA 122
             A + +K +     S  A   A E+    A   PE   SPV++E  +  +A  P    A 
Sbjct: 749  KAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSPEKAKSPLKEDAK 808

Query: 123  EGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKK------NKK 176
                   A     PK E+  +P    E P++ K +   KK+ +    +  K      +KK
Sbjct: 809  -------APEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKK 861

Query: 177  EAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGE---QAAAPGEEAAAGEEGAAGGD 233
            E     EA  P  E  K+ A      +  EA     E   +   P +EA A  E      
Sbjct: 862  EEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVK---- 917

Query: 234  PQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQ 293
             ++AKP+E     +K P  D+ K A+EPSK  EKK  EA       +   A  P   P+ 
Sbjct: 918  -EDAKPKEKTEVAKKEP--DDAK-AKEPSKPAEKK--EAAPEKKDTKEEKAKKPEEKPKT 971

Query: 294  EAAPAE-------EPAAAAASSACAAPSQEAQPECSPEAPPAEAA 331
            EA   E       EP+   A  A  + S + +    PE    + A
Sbjct: 972  EAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDKA 1016



 Score = 71.2 bits (173), Expect = 1e-12
 Identities = 82/308 (26%), Positives = 120/308 (38%), Gaps = 27/308 (8%)

Query: 38  HVKVNGDASPAAAESGAKEEL-------QANGSAPAADKEEPAAAGSGAASPSAAEKGEP 90
           H+KV  +      E   KE +       +   +    ++EE  A           E+ E 
Sbjct: 435 HIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEGKEEEGGEE-EE 493

Query: 91  AAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNET 150
           A     E  + P E+ A  E EA  P        E A + +   SP+ E+  +P+   E 
Sbjct: 494 AEGGEEETKSPPAEEAASPEKEAKSPVK------EEAKSPAEAKSPEKEEAKSPA---EV 544

Query: 151 PKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAP--AAEGGKDEAAGGAAAAAAE-A 207
              +K +   K+  K    +    K+EA    E ++P  A    K+EA   A A + E A
Sbjct: 545 KSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKA 604

Query: 208 GAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEK 267
            +   E+A +P E  +  +E A    P E K  E A +P K  A    K A+ P K EE 
Sbjct: 605 KSPVKEEAKSPAEAKSPVKEEAK--SPAEVKSPEKAKSPTKEEAKSPEK-AKSPEK-EEA 660

Query: 268 KAEEAGASAAACEAPSAAGPGAPPEQEA---APAEEPAAAAASSACAAPSQEAQPECSPE 324
           K+ E   S    EA S     +P + EA     A+ P    A S   A S   +   SPE
Sbjct: 661 KSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPE 720

Query: 325 APPAEAAE 332
              +   E
Sbjct: 721 KAKSPVKE 728



 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 42/159 (26%), Positives = 67/159 (42%), Gaps = 13/159 (8%)

Query: 7    KTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPA 66
            K   K E A E+P E+ V +   +A  ++    KV      A A+   KE+ +       
Sbjct: 873  KVEEKKEPAVEKPKESKVEAKKEEAEDKK----KVPTPEKEAPAKVEVKEDAKPKEKTEV 928

Query: 67   ADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEA 126
            A KE   A     + P  AEK E    AAPE   +   KE  A+    +P +   A+ + 
Sbjct: 929  AKKEPDDAKAKEPSKP--AEKKE----AAPEKKDT---KEEKAKKPEEKPKTEAKAKEDD 979

Query: 127  ASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFK 165
             + +   S PKAE     S +++   K  ++ +  K+ K
Sbjct: 980  KTLSKEPSKPKAEKAEKSSSTDQKDSKPPEKATEDKAAK 1018


>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
          Length = 825

 Score = 79.0 bits (193), Expect = 6e-15
 Identities = 95/359 (26%), Positives = 134/359 (37%), Gaps = 63/359 (17%)

Query: 21  EAAVASSPSKA---NGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGS 77
           EA +   P++    + +E+  V++  +  P +AE    EE  A    P A+K        
Sbjct: 323 EAPLVEFPAEIQPPSAEESPSVELLAEILPPSAEESPSEEPPAEILPPPAEKSPSVELLG 382

Query: 78  GAASPSAAE-------------------KGEPAAAAAPEAGASPVEKEAPAEGEAAEPGS 118
              SPSA +                   K EP       A   P+  E     EA E   
Sbjct: 383 EIRSPSAQKAPIEVQPLPAEGALEEAPAKVEPPTVEETLADVQPLLPEEAPREEARELQL 442

Query: 119 PTAAEGEAASAASSTSSPKAED-------------GATPSPSNETPKKKKKRFSFKKSFK 165
            TA E  A  A +   SP  ++              AT  P++ETP + +          
Sbjct: 443 STAMETPAEEAPTEFQSPLPKETTAEEASAEIQLLAATEPPADETPAEAR---------- 492

Query: 166 LSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGE---QAAAPGEEA 222
            S  S + + +EA    E ++P AE    E A       A   A + E   +A +P  E 
Sbjct: 493 -SPLSEETSAEEAH--AEVQSPLAEETTAEEASAEIQLLAAIEAPADETPAEAQSPLSEE 549

Query: 223 AAGEEGAAGGDPQEAKPQEAAVAPEK--PPASDETKAAEEPSKVEEKKAEEAGASAAACE 280
            + EE  A      AK      AP +  PP+ +ET A E  + ++   A EA A  A  E
Sbjct: 550 TSAEEAPAEVQSPSAKGVSIEEAPLELQPPSGEETTAEEASAAIQLLAATEASAEEAPAE 609

Query: 281 APSAAGPGAPPEQEAAPAEE--------PAAAAASSACAAPSQEAQPECSPEAPPAEAA 331
                   AP E +  PAEE        PA  A +     P++EA  E  P  PPAE A
Sbjct: 610 VQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQP--PPAEEA 666



 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 97/350 (27%), Positives = 139/350 (39%), Gaps = 66/350 (18%)

Query: 19  PGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEE---LQANGSAPAADKEEPAAA 75
           P E A+  +P+K   +     +   D  P   E   +EE   LQ + +     +E P   
Sbjct: 400 PAEGALEEAPAKV--EPPTVEETLADVQPLLPEEAPREEARELQLSTAMETPAEEAPTEF 457

Query: 76  GSGAASPSAAEKG----------EPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGE 125
            S     + AE+           EP A   P    SP+ +E  AE   AE  SP A E  
Sbjct: 458 QSPLPKETTAEEASAEIQLLAATEPPADETPAEARSPLSEETSAEEAHAEVQSPLAEETT 517

Query: 126 AASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAE 185
           A  A++      A +    +P++ETP + +           S  S + + +EA    E +
Sbjct: 518 AEEASAEIQLLAAIE----APADETPAEAQ-----------SPLSEETSAEEAP--AEVQ 560

Query: 186 APAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAA----AGEEGAAGGDPQEAKPQE 241
           +P+A+G   E A        E    SGE+  A    AA    A  E +A   P E +P  
Sbjct: 561 SPSAKGVSIEEA------PLELQPPSGEETTAEEASAAIQLLAATEASAEEAPAEVQPPP 614

Query: 242 AAVAPEK--PPASDETKAA-------EEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPE 292
           A  AP +  PP ++E  A        E P++V+   AEEA A      A  A     PP 
Sbjct: 615 AEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPP 674

Query: 293 QEAAPAE-----------EPAAAAASSACA--APSQEAQPECSPEAPPAE 329
            E APAE           E   AA  S  A   P++EA  +    +PPA+
Sbjct: 675 AEEAPAEVQSLPAEETPIEETLAAVHSPPADDVPAEEASVD--KHSPPAD 722



 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 93/348 (26%), Positives = 130/348 (37%), Gaps = 53/348 (15%)

Query: 34  QENGHVKVNGDAS---PAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEP 90
           QE   VK    A    P+  +  AK +      A A  +  PA        PS  E  + 
Sbjct: 244 QEGSAVKKVASAEIEPPSTEKFPAKIQPPLVEEATAKAEPRPAEETHVQVQPSTEETPDA 303

Query: 91  AAAAAPEAGASPVE----KEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSP 146
            AA A    +  V+    +EAP     AE   P+A E  +    +    P AE+  +  P
Sbjct: 304 EAATAVAENSVKVQPPPAEEAPLVEFPAEIQPPSAEESPSVELLAEILPPSAEESPSEEP 363

Query: 147 SNET-PKKKKKRFSFKKSFKLSGFSFKKNKKEA----GEGGEAEAPAA------------ 189
             E  P   +K  S +   ++   S +K   E      EG   EAPA             
Sbjct: 364 PAEILPPPAEKSPSVELLGEIRSPSAQKAPIEVQPLPAEGALEEAPAKVEPPTVEETLAD 423

Query: 190 -------EGGKDEAAGGAAAAAAEAGAASGE---QAAAP----GEEAAAGEEGAAGGDPQ 235
                  E  ++EA     + A E  A       Q+  P     EEA+A  +  A  +P 
Sbjct: 424 VQPLLPEEAPREEARELQLSTAMETPAEEAPTEFQSPLPKETTAEEASAEIQLLAATEP- 482

Query: 236 EAKPQEAAVAPEKPPASDETKAAEEPSKV-----EEKKAEEAGASA---AACEAPSAAGP 287
              P +   A  + P S+ET A E  ++V     EE  AEEA A     AA EAP+   P
Sbjct: 483 ---PADETPAEARSPLSEETSAEEAHAEVQSPLAEETTAEEASAEIQLLAAIEAPADETP 539

Query: 288 G---APPEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEAPPAEAAE 332
               +P  +E +  E PA   + SA     +EA  E  P +     AE
Sbjct: 540 AEAQSPLSEETSAEEAPAEVQSPSAKGVSIEEAPLELQPPSGEETTAE 587



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 56/249 (22%), Positives = 87/249 (34%), Gaps = 19/249 (7%)

Query: 3   AQFSKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANG 62
           A+     ++  +A E P E  V S  +K    E   +++   +        A   +Q   
Sbjct: 540 AEAQSPLSEETSAEEAPAE--VQSPSAKGVSIEEAPLELQPPSGEETTAEEASAAIQLLA 597

Query: 63  SAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAA 122
           +  A+ +E PA      A  + AE   P A  AP     P  +EAPAE +      P  A
Sbjct: 598 ATEASAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQPPPAEEAPAEVQ------PPPA 651

Query: 123 EGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGG 182
           E EA +      + +A     P P+ E P +        +S        ++         
Sbjct: 652 E-EAPAEVQPPPAEEAPAEVQPPPAEEAPAE-------VQSLPAEETPIEETLAAVHSPP 703

Query: 183 EAEAPAAEGGKDEAAGGAAAAAAE---AGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKP 239
             + PA E   D+ +  A     E    G AS E +  P E+    E        +   P
Sbjct: 704 ADDVPAEEASVDKHSPPADLLLTEEFPIGEASAEVSPPPSEQTPEDEALVENVSTEFQSP 763

Query: 240 QEAAVAPEK 248
           Q A +   K
Sbjct: 764 QVAGIPAVK 772


>gi|30795231 brain abundant, membrane attached signal protein 1
           [Homo sapiens]
          Length = 227

 Score = 75.1 bits (183), Expect = 8e-14
 Identities = 80/234 (34%), Positives = 103/234 (44%), Gaps = 47/234 (20%)

Query: 104 EKEAPAEGEAAEP-GSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKK 162
           EK+  AEG A E  G+P  +E +AA+  +     K +      P  +   K ++      
Sbjct: 21  EKDKKAEGAATEEEGTPKESEPQAAAEPAEAKEGKEK------PDQDAEGKAEE------ 68

Query: 163 SFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEA 222
                    K+ +K+A    E EAP AE  K E   GAA A AE   A  ++ AAPG   
Sbjct: 69  ---------KEGEKDAAAAKE-EAPKAEPEKTE---GAAEAKAEPPKAPEQEQAAPGP-- 113

Query: 223 AAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVE-EKKAEEAGASAAACEA 281
                 AAGG+  +A    AA A    PA     A EEPSK E E K  EA A+ AA E 
Sbjct: 114 ------AAGGEAPKAAEAAAAPAESAAPA-----AGEEPSKEEGEPKKTEAPAAPAAQET 162

Query: 282 PSAAGPGA---PPEQEAAPA--EEPAAAAASSACAAPSQEAQPECSPEAPPAEA 330
            S   P +   P   EAAP+  E PAA  A S  + P  +     + E  P EA
Sbjct: 163 KSDGAPASDSKPGSSEAAPSSKETPAATEAPS--STPKAQGPAASAEEPKPVEA 214



 Score = 68.6 bits (166), Expect = 8e-12
 Identities = 79/269 (29%), Positives = 112/269 (41%), Gaps = 51/269 (18%)

Query: 1   MGAQFSKTA----AKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGA-K 55
           MG + SK         E A E+  +A  A++  +   +E+   +    A PA A+ G  K
Sbjct: 1   MGGKLSKKKKGYNVNDEKAKEKDKKAEGAATEEEGTPKES---EPQAAAEPAEAKEGKEK 57

Query: 56  EELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAE 115
            +  A G A   + E+ AAA    A  +  EK E AA A  E   +P E+E  A G AA 
Sbjct: 58  PDQDAEGKAEEKEGEKDAAAAKEEAPKAEPEKTEGAAEAKAEPPKAP-EQEQAAPGPAAG 116

Query: 116 PGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNK 175
             +P AAE  AA A S  ++P A  G  PS                              
Sbjct: 117 GEAPKAAEAAAAPAES--AAPAA--GEEPS------------------------------ 142

Query: 176 KEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQ 235
           KE GE  + EAPAA   ++  + GA A+ ++ G++     AAP  +       A    P+
Sbjct: 143 KEEGEPKKTEAPAAPAAQETKSDGAPASDSKPGSSE----AAPSSKETPAATEAPSSTPK 198

Query: 236 EAKPQEAAVAP---EKPPA-SDETKAAEE 260
              P  +A  P   E P A SD+T   +E
Sbjct: 199 AQGPAASAEEPKPVEAPAANSDQTVTVKE 227



 Score = 65.1 bits (157), Expect = 8e-11
 Identities = 64/189 (33%), Positives = 84/189 (44%), Gaps = 28/189 (14%)

Query: 161 KKSFKLSGFSFKKNK-KEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEA--GAASGEQAAA 217
           K S K  G++    K KE  +  E  A   EG   E+   AAA  AEA  G    +Q A 
Sbjct: 4   KLSKKKKGYNVNDEKAKEKDKKAEGAATEEEGTPKESEPQAAAEPAEAKEGKEKPDQDAE 63

Query: 218 PGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAA 277
              E   GE+ AA      AK +     PEK   + E KA  EP K  E++ + A   AA
Sbjct: 64  GKAEEKEGEKDAAA-----AKEEAPKAEPEKTEGAAEAKA--EPPKAPEQE-QAAPGPAA 115

Query: 278 ACEAPSAAGPGAPPEQEAAPA---------------EEPAAAAA--SSACAAPSQEAQPE 320
             EAP AA   A P + AAPA               E PAA AA  + +  AP+ +++P 
Sbjct: 116 GGEAPKAAEAAAAPAESAAPAAGEEPSKEEGEPKKTEAPAAPAAQETKSDGAPASDSKPG 175

Query: 321 CSPEAPPAE 329
            S  AP ++
Sbjct: 176 SSEAAPSSK 184



 Score = 55.1 bits (131), Expect = 9e-08
 Identities = 52/161 (32%), Positives = 65/161 (40%), Gaps = 29/161 (18%)

Query: 199 GAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAA--------------- 243
           G   +  + G    ++ A   ++ A G      G P+E++PQ AA               
Sbjct: 2   GGKLSKKKKGYNVNDEKAKEKDKKAEGAATEEEGTPKESEPQAAAEPAEAKEGKEKPDQD 61

Query: 244 ---VAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSA-----AGPGAPPEQEA 295
               A EK    D   A EE  K E +K E  GA+ A  E P A     A PG     EA
Sbjct: 62  AEGKAEEKEGEKDAAAAKEEAPKAEPEKTE--GAAEAKAEPPKAPEQEQAAPGPAAGGEA 119

Query: 296 APAEEPAAAAASSACAA----PSQEAQPECSPEAPPAEAAE 332
             A E AAA A SA  A    PS+E       EAP A AA+
Sbjct: 120 PKAAEAAAAPAESAAPAAGEEPSKEEGEPKKTEAPAAPAAQ 160


>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
          Length = 2400

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 93/369 (25%), Positives = 137/369 (37%), Gaps = 46/369 (12%)

Query: 10   AKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKE---ELQANGS--- 63
            ++G  A E  G+A  A   ++   ++    +  G+A P + +    E   E+Q       
Sbjct: 1848 SEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAE 1907

Query: 64   APAADKE-EPAAAGSGAASPSAAEKGEPAAAAAPEA--------GASPVEKEAPAEGEAA 114
            AP A+KE +P      A      ++ E   A A EA        G +  E E     EA 
Sbjct: 1908 APEAEKEAQPETESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAE 1967

Query: 115  EPGSPTA--------------AEGEAASAASSTSSPKAEDGATPSPSNETPK----KKKK 156
            E   P +              AEGEA   +    +P+AE     +     P+    + + 
Sbjct: 1968 EEAQPESEDVEALEVEVETQEAEGEAQPESEDVEAPEAEGEMQEAEEEAQPESDGVEAQP 2027

Query: 157  RFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAA 216
            +   +++ ++ G + K       E    EAP AE    EA G    A  EA   S +  A
Sbjct: 2028 KSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDA 2087

Query: 217  APGE-EAAAGEEGAAGGDPQ-EAKPQEAAVAPE-KPPASDETKAAEEPSKVEEKKAEEAG 273
               E EA    EG    + + EA+  E   APE +  A  E++  E P    E + E  G
Sbjct: 2088 QEAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEG 2147

Query: 274  ASAAACEA---PSAAG-------PGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPECSP 323
              A   E    P + G         A PE E   A E    A   +    + EA+ E  P
Sbjct: 2148 VEAQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEGEAQPESEGIEAPEAEGEAQP 2207

Query: 324  EAPPAEAAE 332
            E    EA E
Sbjct: 2208 ELEGVEAPE 2216



 Score = 72.0 bits (175), Expect = 7e-13
 Identities = 90/351 (25%), Positives = 129/351 (36%), Gaps = 46/351 (13%)

Query: 11   KGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKE 70
            K     E  G+A       K +  E       G+A         + E    GS    + +
Sbjct: 1756 KDPKLGEAEGDAMAQEREGKTHNSETSAGSELGEAEQEGEGISERGETGGQGSGHEDNLQ 1815

Query: 71   EPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEK--EAP-AEGEAAEPGSPTAAEGEAA 127
              AAAG G   P  ++  E   A   E  A P  +  EAP AEG+A E      AEGEA 
Sbjct: 1816 GEAAAG-GDQDPGQSDGAEGIEAPEAEGEAQPESEGVEAPEAEGDAQE------AEGEA- 1867

Query: 128  SAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKL----SGFSFKKNKKEA-GEGG 182
                    P++ED   P    E   + +   + +  +++     G    + +KEA  E  
Sbjct: 1868 -------QPESEDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAEKEAQPETE 1920

Query: 183  EAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQ------- 235
              EA   EG  +  + GA A  AE  A   E    P  E    +E      P+       
Sbjct: 1921 SVEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEAL 1980

Query: 236  --EAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAE--------EAGASAAACEAPSAA 285
              E + QEA    E  P S++ +A E   +++E + E        EA   +   EA    
Sbjct: 1981 EVEVETQEA--EGEAQPESEDVEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVE 2038

Query: 286  GPGAPPEQEAAP----AEEPAAAAASSACAAPSQEAQPECSPEAPPAEAAE 332
            G     E +A P     E P A   +       QEA+ E  PE+   +A E
Sbjct: 2039 GETQKTEGDAQPESDGVEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQE 2089



 Score = 71.6 bits (174), Expect = 9e-13
 Identities = 83/325 (25%), Positives = 116/325 (35%), Gaps = 23/325 (7%)

Query: 15   AAERPGEAAVASSPSKANGQENGHVKVNGDASPAAA---ESGAKEELQANGS-APAADKE 70
            A E  GE    S  ++A   E    +  G   P +       A+EE Q       A + E
Sbjct: 1924 ALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVE 1983

Query: 71   EPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAA 130
                   G A P + +        APEA     E E  A+ E+    +   +EGE A   
Sbjct: 1984 VETQEAEGEAQPESED------VEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEV 2037

Query: 131  SSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAE 190
               +     D    S   E P+ +++      + +  G   +   +   E  + +A  AE
Sbjct: 2038 EGETQKTEGDAQPESDGVEAPEAEEE------AQEAEGEVQEAEGEAHPESEDVDAQEAE 2091

Query: 191  GGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQ---EAKPQEAAVAPE 247
            G     + G  A  AE  A   E   AP  E  A  E      P+   EA+P+   V  E
Sbjct: 2092 GEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEGV--E 2149

Query: 248  KPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAAS 307
               A  E +   E  + +E + EEA       EAP A G  A PE E   A E    A  
Sbjct: 2150 AQDAEGEAQPESEGIEAQEAE-EEAQPELEGVEAPEAEGE-AQPESEGIEAPEAEGEAQP 2207

Query: 308  SACAAPSQEAQPECSPEAPPAEAAE 332
                  + EA+ E  PE    E  E
Sbjct: 2208 ELEGVEAPEAEEEAQPEPEGVETPE 2232



 Score = 63.2 bits (152), Expect = 3e-10
 Identities = 80/294 (27%), Positives = 106/294 (36%), Gaps = 24/294 (8%)

Query: 10   AKGEAAAERPG-EAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAAD 68
            A+ EA  E  G EA   S   +A   E    K  GDA P   ES   E  +A   A  A+
Sbjct: 2012 AEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQP---ESDGVEAPEAEEEAQEAE 2068

Query: 69   KEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAAS 128
             E   A G         +  E    A PE+       EA  E + AE       EGEA  
Sbjct: 2069 GEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAP-EAEGEAQKAEGIEAPETEGEAQP 2127

Query: 129  AASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEA-EAP 187
             +    +P+AE  A P    E+   + +    +   +  G   ++ ++EA    E  EAP
Sbjct: 2128 ESEGIEAPEAEGEAQP----ESEGVEAQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAP 2183

Query: 188  AAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPE 247
             AEG     + G  A  AE  A    Q    G EA   EE        EA+P+   V  E
Sbjct: 2184 EAEGEAQPESEGIEAPEAEGEA----QPELEGVEAPEAEE--------EAQPEPEGV--E 2229

Query: 248  KPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEP 301
             P A  E +   E     EKK     +        ++      PE    P   P
Sbjct: 2230 TPEAEGEAQPESEGETQGEKKGSPQVSLGDGQSEEASESSSPVPEDRPTPPPSP 2283



 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 93/373 (24%), Positives = 132/373 (35%), Gaps = 52/373 (13%)

Query: 1    MGAQFSKTAAKGEAAAERPGEAAVAS-----SPSKANGQENGHVKVNGDASPAAAES-GA 54
            +G+Q  + A   E     P EA V       SP    G   G +K   D         G 
Sbjct: 1643 LGSQLGEEAEGEEFC---PCEACVRKKVSPMSPKATMGATRGPIKEAFDLQQILQRKRGE 1699

Query: 55   KEELQANGSAPAADKEEPAAA----------GSGAASPSAAEKGEPAAAAAPEAGASPVE 104
              + +A   AP     +P +           G G +     ++GE         G+  + 
Sbjct: 1700 HTDGEAAEVAPGKTHTDPTSTRTVQGAEGGLGPGLSQGPGVDEGEDGE------GSQRLN 1753

Query: 105  KEA-PAEGEAAEPGSPTAAEGEAASAASSTSSPKAE---DGATPSPSNETPKKKKKRFSF 160
            ++  P  GEA         EG+  ++ +S  S   E   +G   S   ET  +       
Sbjct: 1754 RDKDPKLGEAEGDAMAQEREGKTHNSETSAGSELGEAEQEGEGISERGETGGQGSGHEDN 1813

Query: 161  KKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGE 220
             +    +G      + +  EG   EAP AEG     + G  A  AE  A   E  A P  
Sbjct: 1814 LQGEAAAGGDQDPGQSDGAEG--IEAPEAEGEAQPESEGVEAPEAEGDAQEAEGEAQPES 1871

Query: 221  EAAAGEEGAAGGDPQ-----------EAKPQ-EAAVAPE-KPPASDETKAAEEPSKVEEK 267
            E     E      P+           E +P+ E A APE +  A  ET++ E      E 
Sbjct: 1872 EDVEAPEAEGEAQPESEDVETPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGED 1931

Query: 268  KAEEAGASAAACE--APSAAGPGAPPEQ--EAAPAEEPAAAAASSACA----APSQEAQP 319
            + E  GA A   E  A  A G   P  +  E+  AEE A   +    A      +QEA+ 
Sbjct: 1932 EPESEGAEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEVETQEAEG 1991

Query: 320  ECSPEAPPAEAAE 332
            E  PE+   EA E
Sbjct: 1992 EAQPESEDVEAPE 2004



 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 70/263 (26%), Positives = 108/263 (41%), Gaps = 34/263 (12%)

Query: 10   AKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADK 69
            ++G  A E  GEA   S   +A   E      +       AE  A+ EL+   +  A  +
Sbjct: 2129 SEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEGE 2188

Query: 70   EEPAAAG--------------SGAASPSAAEKG--EPAAAAAPEA-GASPVEKEAPAEGE 112
             +P + G               G  +P A E+   EP     PEA G +  E E   +GE
Sbjct: 2189 AQPESEGIEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGVETPEAEGEAQPESEGETQGE 2248

Query: 113  AAEPGSPTAAEGEAAS-AASSTSSPKAEDGAT--PSPSNETPKKKKKRFSFKKSFKLS-- 167
              + GSP  + G+  S  AS +SSP  ED  T  PSP  +TP ++    +   S + S  
Sbjct: 2249 --KKGSPQVSLGDGQSEEASESSSPVPEDRPTPPPSPGGDTPHQRPGSQTGPSSSRASSW 2306

Query: 168  GFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAG-- 225
            G  ++K+ +     G+  +P      D  + G   A  +A     E + +  EEA  G  
Sbjct: 2307 GNCWQKDSENDHVLGDTRSP------DAKSTGTPHAERKATRMYPESSTSEQEEAPLGSR 2360

Query: 226  --EEGAAGGDPQEAKPQEAAVAP 246
              E+GA+ G   +      ++AP
Sbjct: 2361 TPEQGASEGYDLQEDQALGSLAP 2383



 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 43/160 (26%), Positives = 62/160 (38%), Gaps = 21/160 (13%)

Query: 168  GFSFKKNKKEAGEGGEAEAPAAE-----GGKDEAAGGAAAAAAEAGAASGEQAAAPGE-- 220
            G   ++ K+  GEG + E    E     GG+     G      + G   G Q  A  E  
Sbjct: 1335 GVQLEETKETEGEGQQEEEAQLEEIEETGGEGLQEEGVQLEEVKEGPEGGLQGEALEEGL 1394

Query: 221  -EAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAAC 279
             E    EEG+  G       QE + A     +S + K ++E   V+E++A  A ASA  C
Sbjct: 1395 KEEGLPEEGSVHG-------QELSEA-----SSPDGKGSQEDDPVQEEEAGRASASAEPC 1442

Query: 280  EAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQP 319
             A     P  PP    +  +  A+   S +   P  E  P
Sbjct: 1443 PAEGTEEPTEPP-SHLSETDPSASERQSGSQLEPGLEKPP 1481



 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 63/340 (18%), Positives = 112/340 (32%), Gaps = 42/340 (12%)

Query: 12  GEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKE-----ELQANGSAPA 66
           G   A R   +  ++SP+ + G   G  +      P   E G        ++ A   A  
Sbjct: 439 GHGTAGRERCSQDSASPASSTGLPEGS-EPESSCCPRTPEDGVDSASPSAQIGAERKAGG 497

Query: 67  ADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPA--EGEAAEPGSPTAAEG 124
           +  E+P     GA      + G     A  E GAS     +    EG +   G P    G
Sbjct: 498 SLGEDPGLCIDGAGLGGPEQGGRLTPRARSEEGASSDSSASTGSHEGSSEWGGRPQGCPG 557

Query: 125 EAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEA 184
           +A +  S   + +  D A+P+ S                  LS       + E    G  
Sbjct: 558 KARAETSQQEASEGGDPASPALS------------------LSSLRSDDLQAETQGQGTE 599

Query: 185 EAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAV 244
           +A  A   ++    G + +    GA+S        ++        A      + P    V
Sbjct: 600 QATGAAVTREPLVLGLSCSWDSEGASSTPSTCTSSQQGQRRHRSRASAMSSPSSPGLGRV 659

Query: 245 APEKPPAS-----------DETKAAEEPSKVEEKKAEEAG-----ASAAACEAPSAAGPG 288
           AP   P             D +   + P   E ++A + G     + +++     A+G  
Sbjct: 660 APRGHPRHSHYRKDTHSPLDSSVTKQVPRPPERRRACQDGSVPRYSGSSSSTRTQASGNL 719

Query: 289 APPEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEAPPA 328
            PP   + P+++    ++++   A   +     SP   P+
Sbjct: 720 RPPSSGSLPSQDLLGTSSATVTPAVHSDFVSGVSPHNAPS 759



 Score = 39.7 bits (91), Expect = 0.004
 Identities = 37/151 (24%), Positives = 59/151 (39%), Gaps = 13/151 (8%)

Query: 175  KKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASG---EQAAAPGEEAAAGE----E 227
            ++  GEG + E    E  K+   GG    A E G       E+ +  G+E +       +
Sbjct: 1360 EETGGEGLQEEGVQLEEVKEGPEGGLQGEALEEGLKEEGLPEEGSVHGQELSEASSPDGK 1419

Query: 228  GAAGGDP-QEAKPQEAAVAPEKPPASDETKAAEEPSKVEE-----KKAEEAGASAAACEA 281
            G+   DP QE +   A+ + E  PA    +  E PS + E      + +         E 
Sbjct: 1420 GSQEDDPVQEEEAGRASASAEPCPAEGTEEPTEPPSHLSETDPSASERQSGSQLEPGLEK 1479

Query: 282  PSAAGPGAPPEQEAAPAEEPAAAAASSACAA 312
            P  A        +A P +  A  ++S AC+A
Sbjct: 1480 PPGATMMGQEHTQAQPTQGAAERSSSVACSA 1510



 Score = 37.7 bits (86), Expect = 0.014
 Identities = 40/157 (25%), Positives = 57/157 (36%), Gaps = 12/157 (7%)

Query: 179  GEGGEAEAPAAEGGKDEAA---GGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQ 235
            GEG + EA   E  K E      G      +     G+Q     EEA   E    GG+  
Sbjct: 1312 GEGLQEEAVQLEETKTEEGLQEEGVQLEETKETEGEGQQE----EEAQLEEIEETGGEGL 1367

Query: 236  EAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEA 295
            + +  +     E P    + +A EE  K E    E +       EA S  G G+  +   
Sbjct: 1368 QEEGVQLEEVKEGPEGGLQGEALEEGLKEEGLPEEGSVHGQELSEASSPDGKGSQEDDPV 1427

Query: 296  APAEEPAAAAASSACAAPSQEAQPECSPEAPPAEAAE 332
               E   A+A++  C A   E      P  PP+  +E
Sbjct: 1428 QEEEAGRASASAEPCPAEGTE-----EPTEPPSHLSE 1459



 Score = 33.9 bits (76), Expect = 0.21
 Identities = 59/308 (19%), Positives = 118/308 (38%), Gaps = 49/308 (15%)

Query: 45  ASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVE 104
           AS   +   + ++ Q    + A+    P++ G G  +P    +G P  +   +   SP++
Sbjct: 624 ASSTPSTCTSSQQGQRRHRSRASAMSSPSSPGLGRVAP----RGHPRHSHYRKDTHSPLD 679

Query: 105 KEA-------PAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKR 157
                     P    A + GS     G ++S  +  S       +   PS +        
Sbjct: 680 SSVTKQVPRPPERRRACQDGSVPRYSGSSSSTRTQASGNLRPPSSGSLPSQDLLGTSSAT 739

Query: 158 FS-FKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAA 216
            +    S  +SG S   N   AG  G+A      G +  +        +++ + SG  AA
Sbjct: 740 VTPAVHSDFVSGVS-PHNAPSAGWAGDA------GSRTCSPAPIPPHTSDSCSKSG--AA 790

Query: 217 APGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDE--TKAAEEPSK----------- 263
           + GEEA    + ++    Q  +P++ AV P +     +  T+ A+E  +           
Sbjct: 791 SLGEEARDTPQPSSPLVLQVGRPEQGAVGPHRSHCCSQPGTQPAQEAQRGPSPEASWLCG 850

Query: 264 -----------VEEKKAEEAGASAAACEAPSAAGPGAPPEQ---EAAPAEEPAAAAASSA 309
                        ++++   G++ ++ ++ +A GPG  P++   +  P   P   + +S 
Sbjct: 851 RYCPTPPRGRPCPQRRSSSCGSTGSSHQS-TARGPGGSPQEGTRQPGPTPSPGPNSGASR 909

Query: 310 CAAPSQEA 317
            ++ SQ A
Sbjct: 910 RSSASQGA 917



 Score = 33.5 bits (75), Expect = 0.27
 Identities = 49/229 (21%), Positives = 83/229 (36%), Gaps = 25/229 (10%)

Query: 59   QANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGS 118
            +++         +  A G G +      +  P  +  P +GAS     +   G       
Sbjct: 866  RSSSCGSTGSSHQSTARGPGGSPQEGTRQPGPTPSPGPNSGASRRSSASQGAGSRGLSEE 925

Query: 119  PTAAEG------EAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSF- 171
             T   G      E AS  S +S P++   A      +   ++    +++ + + +G +  
Sbjct: 926  KTLRSGGGPQGQEEASGVSPSSLPRSSPEAVVREWLDNIPEEPILMTYELADETTGAAGG 985

Query: 172  -----------KKNKKEAGEGGEAEAPAAEG--GKDEAAGGAAAAAAEAGAASGE---QA 215
                         + +  GE  +A   + EG  G+D    GA   +++ G  SGE   Q 
Sbjct: 986  GLRGPEVDPGDDHSLEGLGEPAQAGQQSLEGDPGQDPEPEGALLGSSDTGPQSGEGVPQG 1045

Query: 216  AAP-GEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSK 263
            AAP G   A  E GA    P   +    A+ P +  AS +   A   SK
Sbjct: 1046 AAPEGVSEAPAEAGADREAPAGCRVSLRAL-PGRVSASTQIMRALMGSK 1093



 Score = 30.4 bits (67), Expect = 2.3
 Identities = 43/158 (27%), Positives = 52/158 (32%), Gaps = 17/158 (10%)

Query: 2    GAQFSKTA-AKGEAAAERPGEAAVASSPSKANGQENG----HVKVN--GDASPAAAESGA 54
            G Q  +T   +GE   E   +            QE G     VK    G     A E G 
Sbjct: 1335 GVQLEETKETEGEGQQEEEAQLEEIEETGGEGLQEEGVQLEEVKEGPEGGLQGEALEEGL 1394

Query: 55   KEE-LQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKE-APAEGE 112
            KEE L   GS    +  E       A+SP      E       EAG +    E  PAEG 
Sbjct: 1395 KEEGLPEEGSVHGQELSE-------ASSPDGKGSQEDDPVQEEEAGRASASAEPCPAEG- 1446

Query: 113  AAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNET 150
              EP  P +   E   +AS   S    +     P   T
Sbjct: 1447 TEEPTEPPSHLSETDPSASERQSGSQLEPGLEKPPGAT 1484



 Score = 30.0 bits (66), Expect = 3.0
 Identities = 34/140 (24%), Positives = 47/140 (33%), Gaps = 2/140 (1%)

Query: 21   EAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKE-EPAAAGSGA 79
            E A  ++ +   G     V    D S       A+   Q+    P  D E E A  GS  
Sbjct: 974  ELADETTGAAGGGLRGPEVDPGDDHSLEGLGEPAQAGQQSLEGDPGQDPEPEGALLGSSD 1033

Query: 80   ASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAE 139
              P + E G P  AA      +P E  A  E  A    S  A  G  +++     +    
Sbjct: 1034 TGPQSGE-GVPQGAAPEGVSEAPAEAGADREAPAGCRVSLRALPGRVSASTQIMRALMGS 1092

Query: 140  DGATPSPSNETPKKKKKRFS 159
                PS   E  +   +R S
Sbjct: 1093 KQGRPSSVPEVSRPMARRLS 1112


>gi|112821681 G protein-regulated inducer of neurite outgrowth 1
           [Homo sapiens]
          Length = 1008

 Score = 73.2 bits (178), Expect = 3e-13
 Identities = 92/337 (27%), Positives = 126/337 (37%), Gaps = 24/337 (7%)

Query: 10  AKGEAAAERPGEA------AVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQAN-G 62
           +KG+A A   G+        V S+P K     +G V         A   G    L    G
Sbjct: 555 SKGKADAGPSGQGDSVSIGKVVSTPGKTVPVPSGKVDPVSLGKAEAIPEGKVGSLPLEKG 614

Query: 63  SAPAADKEEPAAAGSGAASPSAAEK------GEPAAAAAPEAGASPVEKEAPAEGEAAEP 116
           S     K +P A  SG A P +  K      G+  AAA  EAGA  ++KE P   E  +P
Sbjct: 615 SPVTTTKADPRA--SGKAQPQSGGKAETKLPGQEGAAAPGEAGAVCLKKETPQASEKVDP 672

Query: 117 GSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKK 176
           GS   AE  A+      S  KA+  + PS   E+P   K      +  K S  S + ++K
Sbjct: 673 GSCRKAEPLASGKGEPVSLGKAD--SAPSRKTESPSLGKVVPLSLEKTKPSSSSRQLDRK 730

Query: 177 EAGEGGEAEAPAAEGGKDE--AAGGAAAAAAEAGAASGEQAAA---PGEEAAAGEEGAAG 231
             G     E      G+ E  A   ++  A+  G    E A A   P  EAAA   G   
Sbjct: 731 ALGSARSPEGARGSEGRVEPKAEPVSSTEASSLGQKDLEAAGAERSPCPEAAAPPPGPRT 790

Query: 232 GDPQEAKPQEAAVAPEKPPASDETKAAEEP--SKVEEKKAEEAGASAAACEAPSAAGPGA 289
            D     P   A AP  P     T+A  +   S      + + GA  +A    +A    +
Sbjct: 791 RDNFTKAPSWEASAPPPPREDAGTQAGAQACVSVAVSPMSPQDGAGGSAFSFQAAPRAPS 850

Query: 290 PPEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEAP 326
           PP +  A  +    AA + + A      Q    P  P
Sbjct: 851 PPSRRDAGLQVSLGAAETRSVATGPMTPQAAAPPAFP 887



 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 84/384 (21%), Positives = 130/384 (33%), Gaps = 89/384 (23%)

Query: 12  GEAAAERPGEAAVASS----PSKANGQENGHVKVN----GDASPAAAESGAKEELQANGS 63
           G+A    PG+    SS    P  A  ++    KVN    G  +P ++  G    L   G 
Sbjct: 446 GKAGTVSPGKEDPVSSRREDPISAGSRKTSSEKVNPESSGKTNPVSSGPGDPRSLGTAGP 505

Query: 64  APAADKEEPAAAG--------------SGAASPSAAEKGEPAAAAAPEAGASPVEKEAPA 109
            P+A K EPA  G              SG A+P+A+ K EP A    +  +       P+
Sbjct: 506 -PSAVKAEPATGGKGDPLSSEKAGLVASGKAAPTASGKAEPLAVGKEDPVSKGKADAGPS 564

Query: 110 -EGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSG 168
            +G++   G   +  G+     S    P +   A   P  +      ++ S   + K   
Sbjct: 565 GQGDSVSIGKVVSTPGKTVPVPSGKVDPVSLGKAEAIPEGKVGSLPLEKGSPVTTTKADP 624

Query: 169 FSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGE-----------QAAA 217
            +  K + ++G   E + P  EG       GA     E   AS +            A+ 
Sbjct: 625 RASGKAQPQSGGKAETKLPGQEGAAAPGEAGAVCLKKETPQASEKVDPGSCRKAEPLASG 684

Query: 218 PGEEAAAGEEGAA-------------------------------------GGDPQEAKPQ 240
            GE  + G+  +A                                        P+ A+  
Sbjct: 685 KGEPVSLGKADSAPSRKTESPSLGKVVPLSLEKTKPSSSSRQLDRKALGSARSPEGARGS 744

Query: 241 EAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPG--------APPE 292
           E  V P+  P S     + E S + +K  E AGA  + C   +A  PG          P 
Sbjct: 745 EGRVEPKAEPVS-----STEASSLGQKDLEAAGAERSPCPEAAAPPPGPRTRDNFTKAPS 799

Query: 293 QEAA----PAEEPAAAAASSACAA 312
            EA+    P E+    A + AC +
Sbjct: 800 WEASAPPPPREDAGTQAGAQACVS 823



 Score = 55.1 bits (131), Expect = 9e-08
 Identities = 93/375 (24%), Positives = 133/375 (35%), Gaps = 60/375 (16%)

Query: 6    SKTAAKGEAAAERPGEAAVA----SSPSKANGQENGHVKVNGDASPAAAESGAKEELQAN 61
            ++T   G+  A  PGEA        +P  +   + G  +    A P A+  G    L   
Sbjct: 638  AETKLPGQEGAAAPGEAGAVCLKKETPQASEKVDPGSCR---KAEPLASGKGEPVSLGKA 694

Query: 62   GSAPAADKEEPAAAGSGAASPSAAEKGEPAAAA------APEAGASPVEKEAPAEGEA-- 113
             SAP+   E P+    G   P + EK +P++++      A  +  SP E    +EG    
Sbjct: 695  DSAPSRKTESPSL---GKVVPLSLEKTKPSSSSRQLDRKALGSARSP-EGARGSEGRVEP 750

Query: 114  -AEPGSPTAAEG------EAASA--------ASSTSSPKAEDGATPSPSNET---PKKKK 155
             AEP S T A        EAA A        A+    P+  D  T +PS E    P  ++
Sbjct: 751  KAEPVSSTEASSLGQKDLEAAGAERSPCPEAAAPPPGPRTRDNFTKAPSWEASAPPPPRE 810

Query: 156  KRFSFKKSFKLSGFSFKKNKKEAGEGGEA----EAPAA-------EGGKDEAAGGAAAAA 204
               +   +      +      + G GG A     AP A       + G   + G A   +
Sbjct: 811  DAGTQAGAQACVSVAVSPMSPQDGAGGSAFSFQAAPRAPSPPSRRDAGLQVSLGAAETRS 870

Query: 205  AEAGAASGEQAAAPGEEAAAGEEG----AAGGDPQEAKPQEAAVAPEKPPASDETKAAEE 260
               G  + + AA P         G    AA   P+ A+P       EK    +   AA E
Sbjct: 871  VATGPMTPQAAAPPAFPEVRVRPGSALAAAVAPPEPAEPVRDVSWDEKGMTWEVYGAAME 930

Query: 261  PS-------KVEEKKAEEAGASAAACEAPSA-AGPGAPPEQEAAPAEEPAAAAASSACAA 312
                     K  E++ EE G   A    P+A AGPG       AP +  A        A 
Sbjct: 931  VEVLGMAIQKHLERQIEEHGRQGAPAPPPAARAGPGRSGSVRTAPPDGAAKRPPGLFRAL 990

Query: 313  PSQEAQPECSPEAPP 327
                 +P C   A P
Sbjct: 991  LQSVRRPRCCSRAGP 1005



 Score = 32.7 bits (73), Expect = 0.46
 Identities = 61/298 (20%), Positives = 105/298 (35%), Gaps = 87/298 (29%)

Query: 17  ERPGEAAVASSPSKANGQENGHVKVNGDASPAAA-------------------ESGAKEE 57
           ++   A    +P ++ G E+ H   +G    A+                    ES +KE 
Sbjct: 50  QKASPAPPRHTPDQSPGMESRHRSPSGAGEGASCSDGPRGSLACPSPTCFSPQESPSKET 109

Query: 58  LQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAA--------------AAPEAGASPV 103
           L+A+G   A+    P A  SG   P ++ K EP ++              ++ +A ++ +
Sbjct: 110 LEAHG---ASISGTPEATTSGKPEPVSSVKTEPKSSDDRNPMFLEKMDFKSSKQADSTSI 166

Query: 104 EKEAPAEGEAAEPGSPTAAEGE-------------------------------AASAASS 132
            KE P     A+P     AE E                                 S+ + 
Sbjct: 167 GKEDPGSSRKADPMFTGKAEPEILGKGDPVAPGRMDPMTVRKEDLGSLGKVDPLCSSKTY 226

Query: 133 TSSPKAEDGAT-----PSPSNET----PKKKKKRFSFKK----SFKLSGFSFKK------ 173
           T SP+ ED  +     P  S++     P+K++ R+S K+    S K++  S +K      
Sbjct: 227 TVSPRKEDPGSLRKVDPVSSDKVDPVFPRKEEPRYSGKEHPVSSEKVAPTSAEKVDLVLS 286

Query: 174 NKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAG 231
            K++ G  G+A+ P      D A+ G            G         +  G  G+ G
Sbjct: 287 GKRDPGPSGKAD-PMPLESMDSASTGKTEPGLLGKLIPGSSGKNGPVSSGTGAPGSLG 343


>gi|122692281 hypothetical protein LOC645369 [Homo sapiens]
          Length = 621

 Score = 72.0 bits (175), Expect = 7e-13
 Identities = 103/381 (27%), Positives = 140/381 (36%), Gaps = 75/381 (19%)

Query: 10  AKGEAAAERPGEAAVASSPSKANGQEN-GHVKVNGDASPAAAESGAKEELQANGSAPAAD 68
           AK  AAA     AA ASS S A      G + +NG  S   +     +     GS  A  
Sbjct: 215 AKDLAAAAAAAAAAAASSSSSAPAAAPPGAIPLNGFLSYVQSRGLELKPGGCGGSGDAFG 274

Query: 69  KEEPAAAGSGAASPSAAEKGEPAAAAA-PEAGASP-VEKEAPAEGEA---------AEPG 117
                A GS    P+A   G P  AA+ P+  +SP   +E P+  EA            G
Sbjct: 275 AAAMLAKGSWPPHPAAPSGGRPRGAASPPDLASSPRCPREPPSLAEAVYSVYRERSGVAG 334

Query: 118 SPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKE 177
           S  AA   AA+AASS SSP       P    E+  ++    SF  S  LS F+    +  
Sbjct: 335 SRRAAAATAAAAASSCSSP------APCSPPESWGRQSTASSFVDS-SLSAFALLPLQGG 387

Query: 178 AGEGGEAEA-------PAAEGGKDEAAGG--------------------------AAAAA 204
              GG+AE        P  E G  E   G                            A A
Sbjct: 388 RDRGGDAEGASCSWQRPPGERGSQEIPRGELDLSMTNLRGAEGSMRGARREPEEPEGAVA 447

Query: 205 AEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPP--------ASDETK 256
           A A    G +    G  AA      +G     A P     +PE PP        +S   K
Sbjct: 448 ARAARGQGGRLPRTGRYAALRRRSTSGLPDYRAPP-----SPEPPPSPGSADPDSSPLAK 502

Query: 257 AA--EEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEP-----AAAAASSA 309
           AA    P ++E        + ++  + PS++  G  P +EA  + E      A     SA
Sbjct: 503 AASPSPPLRLEGSPPTRRDSGSSQSDDPSSSNKGYTPLREAGTSTESVLDAVAGQTRDSA 562

Query: 310 CAAP---SQEAQPECSPEAPP 327
            AAP   ++++ PE + + PP
Sbjct: 563 VAAPVLGAEQSSPEGASQEPP 583


>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
           [Homo sapiens]
          Length = 1451

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 90/320 (28%), Positives = 127/320 (39%), Gaps = 32/320 (10%)

Query: 15  AAERPG--EAAVASSPSKANGQENGHVKVNGDAS--PAA--AESGAKEELQANGSAPAAD 68
           AA +PG   A  A S S+     +    V G  S  PA   A S + +E  A  +APA  
Sbjct: 184 AAAKPGMVSAGQADSSSEDTSSSSDETDVEGKPSVKPAQVKASSVSTKESPARKAAPAPG 243

Query: 69  KE-EPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAA 127
           K  +      G A P A    +P   +      S  E+EAPA   +    S    +  AA
Sbjct: 244 KVGDVTPQVKGGALPPAKRAKKPEEESESSEEGSESEEEAPAGTRSQVKASEKILQVRAA 303

Query: 128 SAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAP 187
           SA +  +  K   GATP+P    P K     S  K+ K    S  ++  E     E E P
Sbjct: 304 SAPAKGTPGK---GATPAP----PGKAGAVASQTKAGKPEEDS--ESSSEESSDSEEETP 354

Query: 188 AAEG-------GKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQ 240
           AA+        GK    G A+A A E    S  + AAP   A  G+ G A    Q  K +
Sbjct: 355 AAKALLQAKASGKTSQVGAASAPAKE----SPRKGAAP---APPGKTGPAVAKAQAGKRE 407

Query: 241 EAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEE 300
           E + +  +   S+E   A+  +K   K  +   ASA A E+P      APP +    A +
Sbjct: 408 EDSQSSSEESDSEEEAPAQ--AKPSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQ 465

Query: 301 PAAAAASSACAAPSQEAQPE 320
                      + S+E+  +
Sbjct: 466 VQVGKQEEDSRSSSEESDSD 485



 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 76/338 (22%), Positives = 116/338 (34%), Gaps = 29/338 (8%)

Query: 15  AAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAES--GAKEELQANGSAPAADKEEP 72
           A+E+  +   AS+P+K    +       G A   A+++  G  EE   + S  ++D EE 
Sbjct: 293 ASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEE 352

Query: 73  AAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEG---EAASA 129
             A        A+ K     AA+  A  SP +  APA      P    A  G   E + +
Sbjct: 353 TPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDSQS 412

Query: 130 ASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKK-------EAGEGG 182
           +S  S  + E  A   PS + P+ +      K+S +         K        + G+  
Sbjct: 413 SSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQE 472

Query: 183 EAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEA 242
           E    ++E    +    AA  AA+           P      G  G   G     K    
Sbjct: 473 EDSRSSSEESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGK---- 528

Query: 243 AVAPEKPPAS------DETKAAEEPSKVEEKKAEEAGASAAA------CEAPSAAGPGAP 290
            V P  P A       D   ++EE S   + +   A A A         +A   + P   
Sbjct: 529 -VGPATPSAQVGKWEEDSESSSEESSDSSDGEVPTAVAPAQEKSLGNILQAKPTSSPAKG 587

Query: 291 PEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEAPPA 328
           P Q+A P      A      +  S+E+      E  PA
Sbjct: 588 PPQKAGPVAVQVKAEKPMDNSESSEESSDSADSEEAPA 625



 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 76/306 (24%), Positives = 117/306 (38%), Gaps = 49/306 (16%)

Query: 21  EAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEE-PAAAGSGA 79
           +A   SSP+K   Q+ G V V   A      S + EE     S+ +AD EE PAA  +  
Sbjct: 577 QAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEE-----SSDSADSEEAPAAMTAAQ 631

Query: 80  ASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAE 139
           A P         A   P+  A P +    A  + A     T A  +A +A S   S  A 
Sbjct: 632 AKP---------ALKIPQTKACPKKTNTTASAKVAPVRVGTQAPRKAGTATSPAGSSPAV 682

Query: 140 DGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGG 199
            G T  P+ ++                       + +E+    E    A   G+ ++ G 
Sbjct: 683 AGGTQRPAEDS----------------------SSSEESDSEEEKTGLAVTVGQAKSVG- 719

Query: 200 AAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAE 259
                 +  AAS     + G+  A    G  G    + K ++   +      SD  +AA 
Sbjct: 720 ---KGLQVKAASVPVKGSLGQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESDSEEAAA 776

Query: 260 EPSKVEEK-KAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQ 318
            P++V+   K  +A A+ AA  APSA G  + P        +   AAA +   +PS+   
Sbjct: 777 SPAQVKTSVKKTQAKANPAAARAPSAKGTISAP-------GKVVTAAAQAKQRSPSKVKP 829

Query: 319 PECSPE 324
           P  +P+
Sbjct: 830 PVRNPQ 835



 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 71/340 (20%), Positives = 127/340 (37%), Gaps = 27/340 (7%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAK----EELQAN 61
           S    K +A  E+ G+    S P  A G+   ++ ++G +   +AE  A      E +  
Sbjct: 119 SSMKEKAKAETEKAGKTG-NSMPHPATGKTVANL-LSGKSPRKSAEPSANTTLVSETEEE 176

Query: 62  GSAPA-ADKEEPAAAGSGAASPSAAE----------KGEPAAAAAPEAGASPVEKEAPAE 110
           GS PA     +P    +G A  S+ +          +G+P+   A    +S   KE+PA 
Sbjct: 177 GSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEGKPSVKPAQVKASSVSTKESPAR 236

Query: 111 GEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFS 170
             A  PG      G+        + P A+    P   +E+ ++  +      S + +   
Sbjct: 237 KAAPAPGKV----GDVTPQVKGGALPPAKRAKKPEEESESSEEGSE------SEEEAPAG 286

Query: 171 FKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAA 230
            +   K + +  +  A +A        G   A   +AGA + +  A   EE +      +
Sbjct: 287 TRSQVKASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEES 346

Query: 231 GGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAP 290
               +E    +A +  +    + +  AA  P+K   +K            A + A  G  
Sbjct: 347 SDSEEETPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKR 406

Query: 291 PEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEAPPAEA 330
            E   + +EE  +   + A A PS +A    +  AP  E+
Sbjct: 407 EEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKES 446



 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 73/336 (21%), Positives = 121/336 (36%), Gaps = 20/336 (5%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAP 65
           S   A      + P +A  A+SP+ ++    G  +   + S ++ ES ++EE    G A 
Sbjct: 653 SAKVAPVRVGTQAPRKAGTATSPAGSSPAVAGGTQRPAEDSSSSEESDSEEE--KTGLAV 710

Query: 66  AADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGE 125
              + +    G    + S   KG      AP             + E  E    +  E +
Sbjct: 711 TVGQAKSVGKGLQVKAASVPVKGSLGQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESD 770

Query: 126 AASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAE 185
           +  AA+S +  K     T + +N    +     S K +    G    K    A +  +  
Sbjct: 771 SEEAAASPAQVKTSVKKTQAKANPAAARAP---SAKGTISAPG----KVVTAAAQAKQRS 823

Query: 186 APAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAA-- 243
               +            A   A   S  +A A   +A  G E  +G   +E+  +E A  
Sbjct: 824 PSKVKPPVRNPQNSTVLARGPASVPSVGKAVATAAQAQTGPEEDSGSSEEESDSEEEAET 883

Query: 244 VAPEKPPA-SDETKAAEEPSKVEEKKAE------EAGASAAACEAPSAAGPGAPPEQEAA 296
           +A  KP   + + +AA  P+K   +K        + G SAA  +A      G+  E+  +
Sbjct: 884 LAQVKPSGKTHQIRAALAPAKESPRKGAAPTPPGKTGPSAA--QAGKQDDSGSSSEESDS 941

Query: 297 PAEEPAAAAASSACAAPSQEAQPECSPEAPPAEAAE 332
             E PAA  ++     P     P  SP  P A  A+
Sbjct: 942 DGEAPAAVTSAQVIKPPLIFVDPNRSPAGPAATPAQ 977



 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 77/323 (23%), Positives = 120/323 (37%), Gaps = 35/323 (10%)

Query: 19   PGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSG 78
            PG+     +  KA  QE+         S  AA S A+ +     +   A+   PAAA + 
Sbjct: 744  PGKTGPTVTQVKAEKQEDSESSEEESDSEEAAASPAQVKTSVKKTQAKAN---PAAARAP 800

Query: 79   AASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGE------AAEPGSPTAAEGEAASAASS 132
            +A  + +  G+   AAA     SP + + P          A  P S  +     A+AA +
Sbjct: 801  SAKGTISAPGKVVTAAAQAKQRSPSKVKPPVRNPQNSTVLARGPASVPSVGKAVATAAQA 860

Query: 133  TSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGG 192
             + P+ + G     S+E     ++        K SG   K ++  A      E+P  +G 
Sbjct: 861  QTGPEEDSG-----SSEEESDSEEEAETLAQVKPSG---KTHQIRAALAPAKESP-RKGA 911

Query: 193  KDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPAS 252
                 G    +AA+AG    +  ++  E  + GE  AA    Q  KP    V P + PA 
Sbjct: 912  APTPPGKTGPSAAQAG-KQDDSGSSSEESDSDGEAPAAVTSAQVIKPPLIFVDPNRSPAG 970

Query: 253  D-----ETKAAEEPSKVEEKKAEEAGASAAACE--------APSAAGPGAPPEQEAAPAE 299
                  + +AA  P K    +A E+ A +++ E        A     PG        P  
Sbjct: 971  PAATPAQAQAASTPRKA---RASESTARSSSSESEDEDVIPATQCLTPGIRTNVVTMPTA 1027

Query: 300  EPAAAAASSACAAPSQEAQPECS 322
             P  A  +S   A S +     S
Sbjct: 1028 HPRIAPKASMAGASSSKESSRIS 1050



 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 82/328 (25%), Positives = 127/328 (38%), Gaps = 25/328 (7%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAP 65
           +K A K E  +E   E +   S  +A       VK +       A S   +     G+ P
Sbjct: 260 AKRAKKPEEESESSEEGS--ESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPGKGATP 317

Query: 66  AADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGE 125
           A     P  AG+  AS + A K E  + ++ E  +S  E+E PA     +  +       
Sbjct: 318 AP----PGKAGA-VASQTKAGKPEEDSESSSEE-SSDSEEETPAAKALLQAKASGKTSQV 371

Query: 126 AASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAE 185
            A++A +  SP+   GA P+P  +T     K  + K+       S + + +E     EA 
Sbjct: 372 GAASAPAKESPR--KGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEE-----EAP 424

Query: 186 APAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVA 245
           A A   GK      A+A A E    S  + AAP   A   + G A    Q  K +E + +
Sbjct: 425 AQAKPSGKAPQVRAASAPAKE----SPRKGAAP---APPRKTGPAAAQVQVGKQEEDSRS 477

Query: 246 PEKPPASD-ETKAAEEPSKVEE-KKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAA 303
             +   SD E  AA   ++V+   K+ +   ++     P   G G  P  +  PA   A 
Sbjct: 478 SSEESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGKVGPATPSAQ 537

Query: 304 AAA-SSACAAPSQEAQPECSPEAPPAEA 330
                    + S+E+      E P A A
Sbjct: 538 VGKWEEDSESSSEESSDSSDGEVPTAVA 565



 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 68/307 (22%), Positives = 121/307 (39%), Gaps = 36/307 (11%)

Query: 40  KVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAG 99
           K   DA+  A ++   + +  + S+   ++EE A A +  A+P  A        A  +  
Sbjct: 64  KAEEDAALQAKKTRVSDPISTSESS---EEEEEAEAETAKATPRLASTNSSVLGA--DLP 118

Query: 100 ASPVEKEAPAEGEAAEPGS--PTAAEGEAASAASSTSSPK--AEDGATPSPSNETPKKKK 155
           +S  EK      +A + G+  P  A G+  +   S  SP+  AE  A  +  +ET ++  
Sbjct: 119 SSMKEKAKAETEKAGKTGNSMPHPATGKTVANLLSGKSPRKSAEPSANTTLVSETEEEG- 177

Query: 156 KRFSFKKSFKLSGFSFKKNKKEAGEG-GEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQ 214
                  S    G + K     AG+    +E  ++   + +  G  +   A+  A+S   
Sbjct: 178 -------SVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEGKPSVKPAQVKASSVST 230

Query: 215 AAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEK------- 267
             +P  +AA    G  G    + K      A       +E++++EE S+ EE+       
Sbjct: 231 KESPARKAAPAP-GKVGDVTPQVKGGALPPAKRAKKPEEESESSEEGSESEEEAPAGTRS 289

Query: 268 --KAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEA 325
             KA E      A  AP+   PG            PA    + A A+ ++  +PE   E+
Sbjct: 290 QVKASEKILQVRAASAPAKGTPGK--------GATPAPPGKAGAVASQTKAGKPEEDSES 341

Query: 326 PPAEAAE 332
              E+++
Sbjct: 342 SSEESSD 348



 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 69/299 (23%), Positives = 107/299 (35%), Gaps = 38/299 (12%)

Query: 13   EAAAERPGEAAVASSPSKANGQEN-GHVKVNGDASPAAAESGAKEELQANGSA---PAAD 68
            E AAE   +  VA S S  +G    G    N  AS A  +  +   + +  +A   P   
Sbjct: 1148 ETAAESSEDDVVAPSQSLLSGYMTPGLTPANSQASKATPKLDSSPSVSSTLAAKDDPDGK 1207

Query: 69   KEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEA------------AEP 116
            +E      +G  SP    K E A+   P+    P +     +                +P
Sbjct: 1208 QEAKPQQAAGMLSPKTGGK-EAASGTTPQKSRKPKKGAGNPQASTLALQSNITQCLLGQP 1266

Query: 117  GSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKK----KKKRFSFKKSFKLSGFSFK 172
                 A+ +A+     T   + E       + E+ +K    +K++ S  +    +  S K
Sbjct: 1267 WPLNEAQVQASVVKVLTELLEQERKKVVDTTKESSRKGWESRKRKLSGDQPAARTPRSKK 1326

Query: 173  KNKKEAGEGGEAEAPA--------AEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAA 224
            K K  AGEGGEA             +  +D+A+G       +    S      P EE   
Sbjct: 1327 KKKLGAGEGGEASVSPEKTSTTSKGKAKRDKASGDVKEKKGKGSLGSQGAKDEPEEELQK 1386

Query: 225  GEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPS 283
            G     GGD    K ++     EK  +    K  E+    +EKK +   AS    E+PS
Sbjct: 1387 GMGTVEGGDQSNPKSKK-----EKKKSDKRKKDKEK----KEKKKKAKKASTKDSESPS 1436



 Score = 35.4 bits (80), Expect = 0.071
 Identities = 52/232 (22%), Positives = 88/232 (37%), Gaps = 31/232 (13%)

Query: 46   SPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEK 105
            +P A+ +GA    +++  +    +E PA     A     A    P + +    G + + K
Sbjct: 1032 APKASMAGASSSKESSRISDGKKQEGPATQVDSAVGTLPAT--SPQSTSVQAKGTNKLRK 1089

Query: 106  EAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFK 165
                E + A     ++ + E +S +SS S    EDG  P  +             K +  
Sbjct: 1090 PKLPEVQQATKAPESSDDSEDSSDSSSGSE---EDGEGPQGA-------------KSAHT 1133

Query: 166  LSGFSFKKN----KKEAGEGGEAE--APAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPG 219
            L G +  +     ++ A E  E +  AP+          G   A ++A  A+ +  ++P 
Sbjct: 1134 LVGPTPSRTETLVEETAAESSEDDVVAPSQSLLSGYMTPGLTPANSQASKATPKLDSSPS 1193

Query: 220  EEAAAGEEGAAGGDP---QEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKK 268
              +      AA  DP   QEAKPQ+AA          E  +   P K  + K
Sbjct: 1194 VSSTL----AAKDDPDGKQEAKPQQAAGMLSPKTGGKEAASGTTPQKSRKPK 1241



 Score = 33.1 bits (74), Expect = 0.35
 Identities = 42/161 (26%), Positives = 55/161 (34%), Gaps = 24/161 (14%)

Query: 29   SKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKG 88
            S   G E+   K++GD  PAA    +K+            K++  A   G AS S  +  
Sbjct: 1300 SSRKGWESRKRKLSGD-QPAARTPRSKK------------KKKLGAGEGGEASVSPEKTS 1346

Query: 89   EPAAAAAPEAGASPVEKEAPAEGEAAEPGSPT-----------AAEGEAASAASSTSSPK 137
              +   A    AS   KE   +G     G+               EG   S   S    K
Sbjct: 1347 TTSKGKAKRDKASGDVKEKKGKGSLGSQGAKDEPEEELQKGMGTVEGGDQSNPKSKKEKK 1406

Query: 138  AEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEA 178
              D        +  KKK K+ S K S   S    KK KK A
Sbjct: 1407 KSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTA 1447


>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
           [Homo sapiens]
          Length = 1488

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 90/320 (28%), Positives = 127/320 (39%), Gaps = 32/320 (10%)

Query: 15  AAERPG--EAAVASSPSKANGQENGHVKVNGDAS--PAA--AESGAKEELQANGSAPAAD 68
           AA +PG   A  A S S+     +    V G  S  PA   A S + +E  A  +APA  
Sbjct: 184 AAAKPGMVSAGQADSSSEDTSSSSDETDVEGKPSVKPAQVKASSVSTKESPARKAAPAPG 243

Query: 69  KE-EPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAA 127
           K  +      G A P A    +P   +      S  E+EAPA   +    S    +  AA
Sbjct: 244 KVGDVTPQVKGGALPPAKRAKKPEEESESSEEGSESEEEAPAGTRSQVKASEKILQVRAA 303

Query: 128 SAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAP 187
           SA +  +  K   GATP+P    P K     S  K+ K    S  ++  E     E E P
Sbjct: 304 SAPAKGTPGK---GATPAP----PGKAGAVASQTKAGKPEEDS--ESSSEESSDSEEETP 354

Query: 188 AAEG-------GKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQ 240
           AA+        GK    G A+A A E    S  + AAP   A  G+ G A    Q  K +
Sbjct: 355 AAKALLQAKASGKTSQVGAASAPAKE----SPRKGAAP---APPGKTGPAVAKAQAGKRE 407

Query: 241 EAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEE 300
           E + +  +   S+E   A+  +K   K  +   ASA A E+P      APP +    A +
Sbjct: 408 EDSQSSSEESDSEEEAPAQ--AKPSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQ 465

Query: 301 PAAAAASSACAAPSQEAQPE 320
                      + S+E+  +
Sbjct: 466 VQVGKQEEDSRSSSEESDSD 485



 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 76/338 (22%), Positives = 116/338 (34%), Gaps = 29/338 (8%)

Query: 15  AAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAES--GAKEELQANGSAPAADKEEP 72
           A+E+  +   AS+P+K    +       G A   A+++  G  EE   + S  ++D EE 
Sbjct: 293 ASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEE 352

Query: 73  AAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEG---EAASA 129
             A        A+ K     AA+  A  SP +  APA      P    A  G   E + +
Sbjct: 353 TPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDSQS 412

Query: 130 ASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKK-------EAGEGG 182
           +S  S  + E  A   PS + P+ +      K+S +         K        + G+  
Sbjct: 413 SSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQE 472

Query: 183 EAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEA 242
           E    ++E    +    AA  AA+           P      G  G   G     K    
Sbjct: 473 EDSRSSSEESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGK---- 528

Query: 243 AVAPEKPPAS------DETKAAEEPSKVEEKKAEEAGASAAA------CEAPSAAGPGAP 290
            V P  P A       D   ++EE S   + +   A A A         +A   + P   
Sbjct: 529 -VGPATPSAQVGKWEEDSESSSEESSDSSDGEVPTAVAPAQEKSLGNILQAKPTSSPAKG 587

Query: 291 PEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEAPPA 328
           P Q+A P      A      +  S+E+      E  PA
Sbjct: 588 PPQKAGPVAVQVKAEKPMDNSESSEESSDSADSEEAPA 625



 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 76/306 (24%), Positives = 117/306 (38%), Gaps = 49/306 (16%)

Query: 21  EAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEE-PAAAGSGA 79
           +A   SSP+K   Q+ G V V   A      S + EE     S+ +AD EE PAA  +  
Sbjct: 577 QAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEE-----SSDSADSEEAPAAMTAAQ 631

Query: 80  ASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAE 139
           A P         A   P+  A P +    A  + A     T A  +A +A S   S  A 
Sbjct: 632 AKP---------ALKIPQTKACPKKTNTTASAKVAPVRVGTQAPRKAGTATSPAGSSPAV 682

Query: 140 DGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGG 199
            G T  P+ ++                       + +E+    E    A   G+ ++ G 
Sbjct: 683 AGGTQRPAEDS----------------------SSSEESDSEEEKTGLAVTVGQAKSVG- 719

Query: 200 AAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAE 259
                 +  AAS     + G+  A    G  G    + K ++   +      SD  +AA 
Sbjct: 720 ---KGLQVKAASVPVKGSLGQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESDSEEAAA 776

Query: 260 EPSKVEEK-KAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQ 318
            P++V+   K  +A A+ AA  APSA G  + P        +   AAA +   +PS+   
Sbjct: 777 SPAQVKTSVKKTQAKANPAAARAPSAKGTISAP-------GKVVTAAAQAKQRSPSKVKP 829

Query: 319 PECSPE 324
           P  +P+
Sbjct: 830 PVRNPQ 835



 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 71/340 (20%), Positives = 127/340 (37%), Gaps = 27/340 (7%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAK----EELQAN 61
           S    K +A  E+ G+    S P  A G+   ++ ++G +   +AE  A      E +  
Sbjct: 119 SSMKEKAKAETEKAGKTG-NSMPHPATGKTVANL-LSGKSPRKSAEPSANTTLVSETEEE 176

Query: 62  GSAPA-ADKEEPAAAGSGAASPSAAE----------KGEPAAAAAPEAGASPVEKEAPAE 110
           GS PA     +P    +G A  S+ +          +G+P+   A    +S   KE+PA 
Sbjct: 177 GSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEGKPSVKPAQVKASSVSTKESPAR 236

Query: 111 GEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFS 170
             A  PG      G+        + P A+    P   +E+ ++  +      S + +   
Sbjct: 237 KAAPAPGKV----GDVTPQVKGGALPPAKRAKKPEEESESSEEGSE------SEEEAPAG 286

Query: 171 FKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAA 230
            +   K + +  +  A +A        G   A   +AGA + +  A   EE +      +
Sbjct: 287 TRSQVKASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEES 346

Query: 231 GGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAP 290
               +E    +A +  +    + +  AA  P+K   +K            A + A  G  
Sbjct: 347 SDSEEETPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKR 406

Query: 291 PEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEAPPAEA 330
            E   + +EE  +   + A A PS +A    +  AP  E+
Sbjct: 407 EEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKES 446



 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 73/336 (21%), Positives = 121/336 (36%), Gaps = 20/336 (5%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAP 65
           S   A      + P +A  A+SP+ ++    G  +   + S ++ ES ++EE    G A 
Sbjct: 653 SAKVAPVRVGTQAPRKAGTATSPAGSSPAVAGGTQRPAEDSSSSEESDSEEE--KTGLAV 710

Query: 66  AADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGE 125
              + +    G    + S   KG      AP             + E  E    +  E +
Sbjct: 711 TVGQAKSVGKGLQVKAASVPVKGSLGQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESD 770

Query: 126 AASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAE 185
           +  AA+S +  K     T + +N    +     S K +    G    K    A +  +  
Sbjct: 771 SEEAAASPAQVKTSVKKTQAKANPAAARAP---SAKGTISAPG----KVVTAAAQAKQRS 823

Query: 186 APAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAA-- 243
               +            A   A   S  +A A   +A  G E  +G   +E+  +E A  
Sbjct: 824 PSKVKPPVRNPQNSTVLARGPASVPSVGKAVATAAQAQTGPEEDSGSSEEESDSEEEAET 883

Query: 244 VAPEKPPA-SDETKAAEEPSKVEEKKAE------EAGASAAACEAPSAAGPGAPPEQEAA 296
           +A  KP   + + +AA  P+K   +K        + G SAA  +A      G+  E+  +
Sbjct: 884 LAQVKPSGKTHQIRAALAPAKESPRKGAAPTPPGKTGPSAA--QAGKQDDSGSSSEESDS 941

Query: 297 PAEEPAAAAASSACAAPSQEAQPECSPEAPPAEAAE 332
             E PAA  ++     P     P  SP  P A  A+
Sbjct: 942 DGEAPAAVTSAQVIKPPLIFVDPNRSPAGPAATPAQ 977



 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 77/323 (23%), Positives = 120/323 (37%), Gaps = 35/323 (10%)

Query: 19   PGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSG 78
            PG+     +  KA  QE+         S  AA S A+ +     +   A+   PAAA + 
Sbjct: 744  PGKTGPTVTQVKAEKQEDSESSEEESDSEEAAASPAQVKTSVKKTQAKAN---PAAARAP 800

Query: 79   AASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGE------AAEPGSPTAAEGEAASAASS 132
            +A  + +  G+   AAA     SP + + P          A  P S  +     A+AA +
Sbjct: 801  SAKGTISAPGKVVTAAAQAKQRSPSKVKPPVRNPQNSTVLARGPASVPSVGKAVATAAQA 860

Query: 133  TSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGG 192
             + P+ + G     S+E     ++        K SG   K ++  A      E+P  +G 
Sbjct: 861  QTGPEEDSG-----SSEEESDSEEEAETLAQVKPSG---KTHQIRAALAPAKESP-RKGA 911

Query: 193  KDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPAS 252
                 G    +AA+AG    +  ++  E  + GE  AA    Q  KP    V P + PA 
Sbjct: 912  APTPPGKTGPSAAQAG-KQDDSGSSSEESDSDGEAPAAVTSAQVIKPPLIFVDPNRSPAG 970

Query: 253  D-----ETKAAEEPSKVEEKKAEEAGASAAACE--------APSAAGPGAPPEQEAAPAE 299
                  + +AA  P K    +A E+ A +++ E        A     PG        P  
Sbjct: 971  PAATPAQAQAASTPRKA---RASESTARSSSSESEDEDVIPATQCLTPGIRTNVVTMPTA 1027

Query: 300  EPAAAAASSACAAPSQEAQPECS 322
             P  A  +S   A S +     S
Sbjct: 1028 HPRIAPKASMAGASSSKESSRIS 1050



 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 82/328 (25%), Positives = 127/328 (38%), Gaps = 25/328 (7%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAP 65
           +K A K E  +E   E +   S  +A       VK +       A S   +     G+ P
Sbjct: 260 AKRAKKPEEESESSEEGS--ESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPGKGATP 317

Query: 66  AADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGE 125
           A     P  AG+  AS + A K E  + ++ E  +S  E+E PA     +  +       
Sbjct: 318 AP----PGKAGA-VASQTKAGKPEEDSESSSEE-SSDSEEETPAAKALLQAKASGKTSQV 371

Query: 126 AASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAE 185
            A++A +  SP+   GA P+P  +T     K  + K+       S + + +E     EA 
Sbjct: 372 GAASAPAKESPR--KGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEE-----EAP 424

Query: 186 APAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVA 245
           A A   GK      A+A A E    S  + AAP   A   + G A    Q  K +E + +
Sbjct: 425 AQAKPSGKAPQVRAASAPAKE----SPRKGAAP---APPRKTGPAAAQVQVGKQEEDSRS 477

Query: 246 PEKPPASD-ETKAAEEPSKVEE-KKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAA 303
             +   SD E  AA   ++V+   K+ +   ++     P   G G  P  +  PA   A 
Sbjct: 478 SSEESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGKVGPATPSAQ 537

Query: 304 AAA-SSACAAPSQEAQPECSPEAPPAEA 330
                    + S+E+      E P A A
Sbjct: 538 VGKWEEDSESSSEESSDSSDGEVPTAVA 565



 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 68/307 (22%), Positives = 121/307 (39%), Gaps = 36/307 (11%)

Query: 40  KVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAG 99
           K   DA+  A ++   + +  + S+   ++EE A A +  A+P  A        A  +  
Sbjct: 64  KAEEDAALQAKKTRVSDPISTSESS---EEEEEAEAETAKATPRLASTNSSVLGA--DLP 118

Query: 100 ASPVEKEAPAEGEAAEPGS--PTAAEGEAASAASSTSSPK--AEDGATPSPSNETPKKKK 155
           +S  EK      +A + G+  P  A G+  +   S  SP+  AE  A  +  +ET ++  
Sbjct: 119 SSMKEKAKAETEKAGKTGNSMPHPATGKTVANLLSGKSPRKSAEPSANTTLVSETEEEG- 177

Query: 156 KRFSFKKSFKLSGFSFKKNKKEAGEG-GEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQ 214
                  S    G + K     AG+    +E  ++   + +  G  +   A+  A+S   
Sbjct: 178 -------SVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEGKPSVKPAQVKASSVST 230

Query: 215 AAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEK------- 267
             +P  +AA    G  G    + K      A       +E++++EE S+ EE+       
Sbjct: 231 KESPARKAAPAP-GKVGDVTPQVKGGALPPAKRAKKPEEESESSEEGSESEEEAPAGTRS 289

Query: 268 --KAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEA 325
             KA E      A  AP+   PG            PA    + A A+ ++  +PE   E+
Sbjct: 290 QVKASEKILQVRAASAPAKGTPGK--------GATPAPPGKAGAVASQTKAGKPEEDSES 341

Query: 326 PPAEAAE 332
              E+++
Sbjct: 342 SSEESSD 348



 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 69/299 (23%), Positives = 107/299 (35%), Gaps = 38/299 (12%)

Query: 13   EAAAERPGEAAVASSPSKANGQEN-GHVKVNGDASPAAAESGAKEELQANGSA---PAAD 68
            E AAE   +  VA S S  +G    G    N  AS A  +  +   + +  +A   P   
Sbjct: 1185 ETAAESSEDDVVAPSQSLLSGYMTPGLTPANSQASKATPKLDSSPSVSSTLAAKDDPDGK 1244

Query: 69   KEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEA------------AEP 116
            +E      +G  SP    K E A+   P+    P +     +                +P
Sbjct: 1245 QEAKPQQAAGMLSPKTGGK-EAASGTTPQKSRKPKKGAGNPQASTLALQSNITQCLLGQP 1303

Query: 117  GSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKK----KKKRFSFKKSFKLSGFSFK 172
                 A+ +A+     T   + E       + E+ +K    +K++ S  +    +  S K
Sbjct: 1304 WPLNEAQVQASVVKVLTELLEQERKKVVDTTKESSRKGWESRKRKLSGDQPAARTPRSKK 1363

Query: 173  KNKKEAGEGGEAEAPA--------AEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAA 224
            K K  AGEGGEA             +  +D+A+G       +    S      P EE   
Sbjct: 1364 KKKLGAGEGGEASVSPEKTSTTSKGKAKRDKASGDVKEKKGKGSLGSQGAKDEPEEELQK 1423

Query: 225  GEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPS 283
            G     GGD    K ++     EK  +    K  E+    +EKK +   AS    E+PS
Sbjct: 1424 GMGTVEGGDQSNPKSKK-----EKKKSDKRKKDKEK----KEKKKKAKKASTKDSESPS 1473



 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 62/294 (21%), Positives = 103/294 (35%), Gaps = 18/294 (6%)

Query: 25   ASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSA 84
            A+SP   + Q  G  K+     P         E+Q    AP +  +   ++ S + S   
Sbjct: 1109 ATSPQSTSVQAKGTNKLRKPKLP---------EVQQATKAPESSDDSEDSSDSSSGSEED 1159

Query: 85   AEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATP 144
             E G   A +A   G +P   E   E  AAE     ++E +  + + S  S     G TP
Sbjct: 1160 GE-GPQGAKSAHTLGPTPSRTETLVEETAAE-----SSEDDVVAPSQSLLSGYMTPGLTP 1213

Query: 145  SPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAA 204
            + S  +    K   S   S  L+       K+EA     A   + + G  EAA G     
Sbjct: 1214 ANSQASKATPKLDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPKTGGKEAASGTTPQK 1273

Query: 205  AEAGAASGEQAAAPGEEAAAGEEGAAGGDP---QEAKPQEAAVAPEKPPASDETKAAEEP 261
            +           A      +       G P    EA+ Q + V         E K   + 
Sbjct: 1274 SRKPKKGAGNPQASTLALQSNITQCLLGQPWPLNEAQVQASVVKVLTELLEQERKKVVDT 1333

Query: 262  SKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQ 315
            +K   +K  E+     + + P+A  P +  +++    E   A+ +    +  S+
Sbjct: 1334 TKESSRKGWESRKRKLSGDQPAARTPRSKKKKKLGAGEGGEASVSPEKTSTTSK 1387



 Score = 33.1 bits (74), Expect = 0.35
 Identities = 42/161 (26%), Positives = 55/161 (34%), Gaps = 24/161 (14%)

Query: 29   SKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKG 88
            S   G E+   K++GD  PAA    +K+            K++  A   G AS S  +  
Sbjct: 1337 SSRKGWESRKRKLSGD-QPAARTPRSKK------------KKKLGAGEGGEASVSPEKTS 1383

Query: 89   EPAAAAAPEAGASPVEKEAPAEGEAAEPGSPT-----------AAEGEAASAASSTSSPK 137
              +   A    AS   KE   +G     G+               EG   S   S    K
Sbjct: 1384 TTSKGKAKRDKASGDVKEKKGKGSLGSQGAKDEPEEELQKGMGTVEGGDQSNPKSKKEKK 1443

Query: 138  AEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEA 178
              D        +  KKK K+ S K S   S    KK KK A
Sbjct: 1444 KSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTA 1484


>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a
           [Homo sapiens]
          Length = 1450

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 90/320 (28%), Positives = 127/320 (39%), Gaps = 32/320 (10%)

Query: 15  AAERPG--EAAVASSPSKANGQENGHVKVNGDAS--PAA--AESGAKEELQANGSAPAAD 68
           AA +PG   A  A S S+     +    V G  S  PA   A S + +E  A  +APA  
Sbjct: 184 AAAKPGMVSAGQADSSSEDTSSSSDETDVEGKPSVKPAQVKASSVSTKESPARKAAPAPG 243

Query: 69  KE-EPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAA 127
           K  +      G A P A    +P   +      S  E+EAPA   +    S    +  AA
Sbjct: 244 KVGDVTPQVKGGALPPAKRAKKPEEESESSEEGSESEEEAPAGTRSQVKASEKILQVRAA 303

Query: 128 SAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAP 187
           SA +  +  K   GATP+P    P K     S  K+ K    S  ++  E     E E P
Sbjct: 304 SAPAKGTPGK---GATPAP----PGKAGAVASQTKAGKPEEDS--ESSSEESSDSEEETP 354

Query: 188 AAEG-------GKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQ 240
           AA+        GK    G A+A A E    S  + AAP   A  G+ G A    Q  K +
Sbjct: 355 AAKALLQAKASGKTSQVGAASAPAKE----SPRKGAAP---APPGKTGPAVAKAQAGKRE 407

Query: 241 EAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEE 300
           E + +  +   S+E   A+  +K   K  +   ASA A E+P      APP +    A +
Sbjct: 408 EDSQSSSEESDSEEEAPAQ--AKPSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQ 465

Query: 301 PAAAAASSACAAPSQEAQPE 320
                      + S+E+  +
Sbjct: 466 VQVGKQEEDSRSSSEESDSD 485



 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 76/338 (22%), Positives = 116/338 (34%), Gaps = 29/338 (8%)

Query: 15  AAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAES--GAKEELQANGSAPAADKEEP 72
           A+E+  +   AS+P+K    +       G A   A+++  G  EE   + S  ++D EE 
Sbjct: 293 ASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEESSDSEEE 352

Query: 73  AAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEG---EAASA 129
             A        A+ K     AA+  A  SP +  APA      P    A  G   E + +
Sbjct: 353 TPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKREEDSQS 412

Query: 130 ASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKK-------EAGEGG 182
           +S  S  + E  A   PS + P+ +      K+S +         K        + G+  
Sbjct: 413 SSEESDSEEEAPAQAKPSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQE 472

Query: 183 EAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEA 242
           E    ++E    +    AA  AA+           P      G  G   G     K    
Sbjct: 473 EDSRSSSEESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGK---- 528

Query: 243 AVAPEKPPAS------DETKAAEEPSKVEEKKAEEAGASAAA------CEAPSAAGPGAP 290
            V P  P A       D   ++EE S   + +   A A A         +A   + P   
Sbjct: 529 -VGPATPSAQVGKWEEDSESSSEESSDSSDGEVPTAVAPAQEKSLGNILQAKPTSSPAKG 587

Query: 291 PEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEAPPA 328
           P Q+A P      A      +  S+E+      E  PA
Sbjct: 588 PPQKAGPVAVQVKAEKPMDNSESSEESSDSADSEEAPA 625



 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 76/306 (24%), Positives = 117/306 (38%), Gaps = 49/306 (16%)

Query: 21  EAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEE-PAAAGSGA 79
           +A   SSP+K   Q+ G V V   A      S + EE     S+ +AD EE PAA  +  
Sbjct: 577 QAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEE-----SSDSADSEEAPAAMTAAQ 631

Query: 80  ASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAE 139
           A P         A   P+  A P +    A  + A     T A  +A +A S   S  A 
Sbjct: 632 AKP---------ALKIPQTKACPKKTNTTASAKVAPVRVGTQAPRKAGTATSPAGSSPAV 682

Query: 140 DGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGG 199
            G T  P+ ++                       + +E+    E    A   G+ ++ G 
Sbjct: 683 AGGTQRPAEDS----------------------SSSEESDSEEEKTGLAVTVGQAKSVG- 719

Query: 200 AAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAE 259
                 +  AAS     + G+  A    G  G    + K ++   +      SD  +AA 
Sbjct: 720 ---KGLQVKAASVPVKGSLGQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESDSEEAAA 776

Query: 260 EPSKVEEK-KAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQ 318
            P++V+   K  +A A+ AA  APSA G  + P        +   AAA +   +PS+   
Sbjct: 777 SPAQVKTSVKKTQAKANPAAARAPSAKGTISAP-------GKVVTAAAQAKQRSPSKVKP 829

Query: 319 PECSPE 324
           P  +P+
Sbjct: 830 PVRNPQ 835



 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 71/340 (20%), Positives = 127/340 (37%), Gaps = 27/340 (7%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAK----EELQAN 61
           S    K +A  E+ G+    S P  A G+   ++ ++G +   +AE  A      E +  
Sbjct: 119 SSMKEKAKAETEKAGKTG-NSMPHPATGKTVANL-LSGKSPRKSAEPSANTTLVSETEEE 176

Query: 62  GSAPA-ADKEEPAAAGSGAASPSAAE----------KGEPAAAAAPEAGASPVEKEAPAE 110
           GS PA     +P    +G A  S+ +          +G+P+   A    +S   KE+PA 
Sbjct: 177 GSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEGKPSVKPAQVKASSVSTKESPAR 236

Query: 111 GEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFS 170
             A  PG      G+        + P A+    P   +E+ ++  +      S + +   
Sbjct: 237 KAAPAPGKV----GDVTPQVKGGALPPAKRAKKPEEESESSEEGSE------SEEEAPAG 286

Query: 171 FKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAA 230
            +   K + +  +  A +A        G   A   +AGA + +  A   EE +      +
Sbjct: 287 TRSQVKASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEES 346

Query: 231 GGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAP 290
               +E    +A +  +    + +  AA  P+K   +K            A + A  G  
Sbjct: 347 SDSEEETPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKR 406

Query: 291 PEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEAPPAEA 330
            E   + +EE  +   + A A PS +A    +  AP  E+
Sbjct: 407 EEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKES 446



 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 73/336 (21%), Positives = 121/336 (36%), Gaps = 20/336 (5%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAP 65
           S   A      + P +A  A+SP+ ++    G  +   + S ++ ES ++EE    G A 
Sbjct: 653 SAKVAPVRVGTQAPRKAGTATSPAGSSPAVAGGTQRPAEDSSSSEESDSEEE--KTGLAV 710

Query: 66  AADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGE 125
              + +    G    + S   KG      AP             + E  E    +  E +
Sbjct: 711 TVGQAKSVGKGLQVKAASVPVKGSLGQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESD 770

Query: 126 AASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAE 185
           +  AA+S +  K     T + +N    +     S K +    G    K    A +  +  
Sbjct: 771 SEEAAASPAQVKTSVKKTQAKANPAAARAP---SAKGTISAPG----KVVTAAAQAKQRS 823

Query: 186 APAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAA-- 243
               +            A   A   S  +A A   +A  G E  +G   +E+  +E A  
Sbjct: 824 PSKVKPPVRNPQNSTVLARGPASVPSVGKAVATAAQAQTGPEEDSGSSEEESDSEEEAET 883

Query: 244 VAPEKPPA-SDETKAAEEPSKVEEKKAE------EAGASAAACEAPSAAGPGAPPEQEAA 296
           +A  KP   + + +AA  P+K   +K        + G SAA  +A      G+  E+  +
Sbjct: 884 LAQVKPSGKTHQIRAALAPAKESPRKGAAPTPPGKTGPSAA--QAGKQDDSGSSSEESDS 941

Query: 297 PAEEPAAAAASSACAAPSQEAQPECSPEAPPAEAAE 332
             E PAA  ++     P     P  SP  P A  A+
Sbjct: 942 DGEAPAAVTSAQVIKPPLIFVDPNRSPAGPAATPAQ 977



 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 77/323 (23%), Positives = 120/323 (37%), Gaps = 35/323 (10%)

Query: 19   PGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSG 78
            PG+     +  KA  QE+         S  AA S A+ +     +   A+   PAAA + 
Sbjct: 744  PGKTGPTVTQVKAEKQEDSESSEEESDSEEAAASPAQVKTSVKKTQAKAN---PAAARAP 800

Query: 79   AASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGE------AAEPGSPTAAEGEAASAASS 132
            +A  + +  G+   AAA     SP + + P          A  P S  +     A+AA +
Sbjct: 801  SAKGTISAPGKVVTAAAQAKQRSPSKVKPPVRNPQNSTVLARGPASVPSVGKAVATAAQA 860

Query: 133  TSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGG 192
             + P+ + G     S+E     ++        K SG   K ++  A      E+P  +G 
Sbjct: 861  QTGPEEDSG-----SSEEESDSEEEAETLAQVKPSG---KTHQIRAALAPAKESP-RKGA 911

Query: 193  KDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPAS 252
                 G    +AA+AG    +  ++  E  + GE  AA    Q  KP    V P + PA 
Sbjct: 912  APTPPGKTGPSAAQAG-KQDDSGSSSEESDSDGEAPAAVTSAQVIKPPLIFVDPNRSPAG 970

Query: 253  D-----ETKAAEEPSKVEEKKAEEAGASAAACE--------APSAAGPGAPPEQEAAPAE 299
                  + +AA  P K    +A E+ A +++ E        A     PG        P  
Sbjct: 971  PAATPAQAQAASTPRKA---RASESTARSSSSESEDEDVIPATQCLTPGIRTNVVTMPTA 1027

Query: 300  EPAAAAASSACAAPSQEAQPECS 322
             P  A  +S   A S +     S
Sbjct: 1028 HPRIAPKASMAGASSSKESSRIS 1050



 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 82/328 (25%), Positives = 127/328 (38%), Gaps = 25/328 (7%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAP 65
           +K A K E  +E   E +   S  +A       VK +       A S   +     G+ P
Sbjct: 260 AKRAKKPEEESESSEEGS--ESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPGKGATP 317

Query: 66  AADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGE 125
           A     P  AG+  AS + A K E  + ++ E  +S  E+E PA     +  +       
Sbjct: 318 AP----PGKAGA-VASQTKAGKPEEDSESSSEE-SSDSEEETPAAKALLQAKASGKTSQV 371

Query: 126 AASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAE 185
            A++A +  SP+   GA P+P  +T     K  + K+       S + + +E     EA 
Sbjct: 372 GAASAPAKESPR--KGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEE-----EAP 424

Query: 186 APAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVA 245
           A A   GK      A+A A E    S  + AAP   A   + G A    Q  K +E + +
Sbjct: 425 AQAKPSGKAPQVRAASAPAKE----SPRKGAAP---APPRKTGPAAAQVQVGKQEEDSRS 477

Query: 246 PEKPPASD-ETKAAEEPSKVEE-KKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAA 303
             +   SD E  AA   ++V+   K+ +   ++     P   G G  P  +  PA   A 
Sbjct: 478 SSEESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGKVGPATPSAQ 537

Query: 304 AAA-SSACAAPSQEAQPECSPEAPPAEA 330
                    + S+E+      E P A A
Sbjct: 538 VGKWEEDSESSSEESSDSSDGEVPTAVA 565



 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 68/307 (22%), Positives = 121/307 (39%), Gaps = 36/307 (11%)

Query: 40  KVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAG 99
           K   DA+  A ++   + +  + S+   ++EE A A +  A+P  A        A  +  
Sbjct: 64  KAEEDAALQAKKTRVSDPISTSESS---EEEEEAEAETAKATPRLASTNSSVLGA--DLP 118

Query: 100 ASPVEKEAPAEGEAAEPGS--PTAAEGEAASAASSTSSPK--AEDGATPSPSNETPKKKK 155
           +S  EK      +A + G+  P  A G+  +   S  SP+  AE  A  +  +ET ++  
Sbjct: 119 SSMKEKAKAETEKAGKTGNSMPHPATGKTVANLLSGKSPRKSAEPSANTTLVSETEEEG- 177

Query: 156 KRFSFKKSFKLSGFSFKKNKKEAGEG-GEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQ 214
                  S    G + K     AG+    +E  ++   + +  G  +   A+  A+S   
Sbjct: 178 -------SVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEGKPSVKPAQVKASSVST 230

Query: 215 AAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEK------- 267
             +P  +AA    G  G    + K      A       +E++++EE S+ EE+       
Sbjct: 231 KESPARKAAPAP-GKVGDVTPQVKGGALPPAKRAKKPEEESESSEEGSESEEEAPAGTRS 289

Query: 268 --KAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEA 325
             KA E      A  AP+   PG            PA    + A A+ ++  +PE   E+
Sbjct: 290 QVKASEKILQVRAASAPAKGTPGK--------GATPAPPGKAGAVASQTKAGKPEEDSES 341

Query: 326 PPAEAAE 332
              E+++
Sbjct: 342 SSEESSD 348



 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 69/299 (23%), Positives = 107/299 (35%), Gaps = 38/299 (12%)

Query: 13   EAAAERPGEAAVASSPSKANGQEN-GHVKVNGDASPAAAESGAKEELQANGSA---PAAD 68
            E AAE   +  VA S S  +G    G    N  AS A  +  +   + +  +A   P   
Sbjct: 1147 ETAAESSEDDVVAPSQSLLSGYMTPGLTPANSQASKATPKLDSSPSVSSTLAAKDDPDGK 1206

Query: 69   KEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEA------------AEP 116
            +E      +G  SP    K E A+   P+    P +     +                +P
Sbjct: 1207 QEAKPQQAAGMLSPKTGGK-EAASGTTPQKSRKPKKGAGNPQASTLALQSNITQCLLGQP 1265

Query: 117  GSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKK----KKKRFSFKKSFKLSGFSFK 172
                 A+ +A+     T   + E       + E+ +K    +K++ S  +    +  S K
Sbjct: 1266 WPLNEAQVQASVVKVLTELLEQERKKVVDTTKESSRKGWESRKRKLSGDQPAARTPRSKK 1325

Query: 173  KNKKEAGEGGEAEAPA--------AEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAA 224
            K K  AGEGGEA             +  +D+A+G       +    S      P EE   
Sbjct: 1326 KKKLGAGEGGEASVSPEKTSTTSKGKAKRDKASGDVKEKKGKGSLGSQGAKDEPEEELQK 1385

Query: 225  GEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPS 283
            G     GGD    K ++     EK  +    K  E+    +EKK +   AS    E+PS
Sbjct: 1386 GMGTVEGGDQSNPKSKK-----EKKKSDKRKKDKEK----KEKKKKAKKASTKDSESPS 1435



 Score = 37.4 bits (85), Expect = 0.019
 Identities = 50/226 (22%), Positives = 87/226 (38%), Gaps = 20/226 (8%)

Query: 46   SPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEK 105
            +P A+ +GA    +++  +    +E PA     A     A    P + +    G + + K
Sbjct: 1032 APKASMAGASSSKESSRISDGKKQEGPATQVDSAVGTLPAT--SPQSTSVQAKGTNKLRK 1089

Query: 106  EAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFK 165
                E + A     ++ + E +S +SS S    EDG       E P+  K   +   +  
Sbjct: 1090 PKLPEVQQATKAPESSDDSEDSSDSSSGSE---EDG-------EGPQGAKSAHTLGPTPS 1139

Query: 166  LSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAG 225
             +    ++   E+ E  +  AP+          G   A ++A  A+ +  ++P   +   
Sbjct: 1140 RTETLVEETAAESSE-DDVVAPSQSLLSGYMTPGLTPANSQASKATPKLDSSPSVSSTL- 1197

Query: 226  EEGAAGGDP---QEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKK 268
               AA  DP   QEAKPQ+AA          E  +   P K  + K
Sbjct: 1198 ---AAKDDPDGKQEAKPQQAAGMLSPKTGGKEAASGTTPQKSRKPK 1240



 Score = 33.1 bits (74), Expect = 0.35
 Identities = 42/161 (26%), Positives = 55/161 (34%), Gaps = 24/161 (14%)

Query: 29   SKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKG 88
            S   G E+   K++GD  PAA    +K+            K++  A   G AS S  +  
Sbjct: 1299 SSRKGWESRKRKLSGD-QPAARTPRSKK------------KKKLGAGEGGEASVSPEKTS 1345

Query: 89   EPAAAAAPEAGASPVEKEAPAEGEAAEPGSPT-----------AAEGEAASAASSTSSPK 137
              +   A    AS   KE   +G     G+               EG   S   S    K
Sbjct: 1346 TTSKGKAKRDKASGDVKEKKGKGSLGSQGAKDEPEEELQKGMGTVEGGDQSNPKSKKEKK 1405

Query: 138  AEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEA 178
              D        +  KKK K+ S K S   S    KK KK A
Sbjct: 1406 KSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTA 1446


>gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c
           [Homo sapiens]
          Length = 958

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 90/320 (28%), Positives = 127/320 (39%), Gaps = 32/320 (10%)

Query: 15  AAERPG--EAAVASSPSKANGQENGHVKVNGDAS--PAA--AESGAKEELQANGSAPAAD 68
           AA +PG   A  A S S+     +    V G  S  PA   A S + +E  A  +APA  
Sbjct: 184 AAAKPGMVSAGQADSSSEDTSSSSDETDVEGKPSVKPAQVKASSVSTKESPARKAAPAPG 243

Query: 69  KE-EPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAA 127
           K  +      G A P A    +P   +      S  E+EAPA   +    S    +  AA
Sbjct: 244 KVGDVTPQVKGGALPPAKRAKKPEEESESSEEGSESEEEAPAGTRSQVKASEKILQVRAA 303

Query: 128 SAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAP 187
           SA +  +  K   GATP+P    P K     S  K+ K    S  ++  E     E E P
Sbjct: 304 SAPAKGTPGK---GATPAP----PGKAGAVASQTKAGKPEEDS--ESSSEESSDSEEETP 354

Query: 188 AAEG-------GKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQ 240
           AA+        GK    G A+A A E    S  + AAP   A  G+ G A    Q  K +
Sbjct: 355 AAKALLQAKASGKTSQVGAASAPAKE----SPRKGAAP---APPGKTGPAVAKAQAGKRE 407

Query: 241 EAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEE 300
           E + +  +   S+E   A+  +K   K  +   ASA A E+P      APP +    A +
Sbjct: 408 EDSQSSSEESDSEEEAPAQ--AKPSGKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQ 465

Query: 301 PAAAAASSACAAPSQEAQPE 320
                      + S+E+  +
Sbjct: 466 VQVGKQEEDSRSSSEESDSD 485



 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 76/306 (24%), Positives = 117/306 (38%), Gaps = 49/306 (16%)

Query: 21  EAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEE-PAAAGSGA 79
           +A   SSP+K   Q+ G V V   A      S + EE     S+ +AD EE PAA  +  
Sbjct: 577 QAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEE-----SSDSADSEEAPAAMTAAQ 631

Query: 80  ASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAE 139
           A P         A   P+  A P +    A  + A     T A  +A +A S   S  A 
Sbjct: 632 AKP---------ALKIPQTKACPKKTNTTASAKVAPVRVGTQAPRKAGTATSPAGSSPAV 682

Query: 140 DGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGG 199
            G T  P+ ++                       + +E+    E    A   G+ ++ G 
Sbjct: 683 AGGTQRPAEDS----------------------SSSEESDSEEEKTGLAVTVGQAKSVG- 719

Query: 200 AAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAE 259
                 +  AAS     + G+  A    G  G    + K ++   +      SD  +AA 
Sbjct: 720 ---KGLQVKAASVPVKGSLGQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESDSEEAAA 776

Query: 260 EPSKVEEK-KAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQ 318
            P++V+   K  +A A+ AA  APSA G  + P        +   AAA +   +PS+   
Sbjct: 777 SPAQVKTSVKKTQAKANPAAARAPSAKGTISAP-------GKVVTAAAQAKQRSPSKVKP 829

Query: 319 PECSPE 324
           P  +P+
Sbjct: 830 PVRNPQ 835



 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 71/340 (20%), Positives = 127/340 (37%), Gaps = 27/340 (7%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAK----EELQAN 61
           S    K +A  E+ G+    S P  A G+   ++ ++G +   +AE  A      E +  
Sbjct: 119 SSMKEKAKAETEKAGKTG-NSMPHPATGKTVANL-LSGKSPRKSAEPSANTTLVSETEEE 176

Query: 62  GSAPA-ADKEEPAAAGSGAASPSAAE----------KGEPAAAAAPEAGASPVEKEAPAE 110
           GS PA     +P    +G A  S+ +          +G+P+   A    +S   KE+PA 
Sbjct: 177 GSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEGKPSVKPAQVKASSVSTKESPAR 236

Query: 111 GEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFS 170
             A  PG      G+        + P A+    P   +E+ ++  +      S + +   
Sbjct: 237 KAAPAPGKV----GDVTPQVKGGALPPAKRAKKPEEESESSEEGSE------SEEEAPAG 286

Query: 171 FKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAA 230
            +   K + +  +  A +A        G   A   +AGA + +  A   EE +      +
Sbjct: 287 TRSQVKASEKILQVRAASAPAKGTPGKGATPAPPGKAGAVASQTKAGKPEEDSESSSEES 346

Query: 231 GGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAP 290
               +E    +A +  +    + +  AA  P+K   +K            A + A  G  
Sbjct: 347 SDSEEETPAAKALLQAKASGKTSQVGAASAPAKESPRKGAAPAPPGKTGPAVAKAQAGKR 406

Query: 291 PEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEAPPAEA 330
            E   + +EE  +   + A A PS +A    +  AP  E+
Sbjct: 407 EEDSQSSSEESDSEEEAPAQAKPSGKAPQVRAASAPAKES 446



 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 82/328 (25%), Positives = 127/328 (38%), Gaps = 25/328 (7%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAP 65
           +K A K E  +E   E +   S  +A       VK +       A S   +     G+ P
Sbjct: 260 AKRAKKPEEESESSEEGS--ESEEEAPAGTRSQVKASEKILQVRAASAPAKGTPGKGATP 317

Query: 66  AADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGE 125
           A     P  AG+  AS + A K E  + ++ E  +S  E+E PA     +  +       
Sbjct: 318 AP----PGKAGA-VASQTKAGKPEEDSESSSEE-SSDSEEETPAAKALLQAKASGKTSQV 371

Query: 126 AASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAE 185
            A++A +  SP+   GA P+P  +T     K  + K+       S + + +E     EA 
Sbjct: 372 GAASAPAKESPR--KGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEE-----EAP 424

Query: 186 APAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVA 245
           A A   GK      A+A A E    S  + AAP   A   + G A    Q  K +E + +
Sbjct: 425 AQAKPSGKAPQVRAASAPAKE----SPRKGAAP---APPRKTGPAAAQVQVGKQEEDSRS 477

Query: 246 PEKPPASD-ETKAAEEPSKVEE-KKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAA 303
             +   SD E  AA   ++V+   K+ +   ++     P   G G  P  +  PA   A 
Sbjct: 478 SSEESDSDREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGKVGPATPSAQ 537

Query: 304 AAA-SSACAAPSQEAQPECSPEAPPAEA 330
                    + S+E+      E P A A
Sbjct: 538 VGKWEEDSESSSEESSDSSDGEVPTAVA 565



 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 68/307 (22%), Positives = 121/307 (39%), Gaps = 36/307 (11%)

Query: 40  KVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAG 99
           K   DA+  A ++   + +  + S+   ++EE A A +  A+P  A        A  +  
Sbjct: 64  KAEEDAALQAKKTRVSDPISTSESS---EEEEEAEAETAKATPRLASTNSSVLGA--DLP 118

Query: 100 ASPVEKEAPAEGEAAEPGS--PTAAEGEAASAASSTSSPK--AEDGATPSPSNETPKKKK 155
           +S  EK      +A + G+  P  A G+  +   S  SP+  AE  A  +  +ET ++  
Sbjct: 119 SSMKEKAKAETEKAGKTGNSMPHPATGKTVANLLSGKSPRKSAEPSANTTLVSETEEEG- 177

Query: 156 KRFSFKKSFKLSGFSFKKNKKEAGEG-GEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQ 214
                  S    G + K     AG+    +E  ++   + +  G  +   A+  A+S   
Sbjct: 178 -------SVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEGKPSVKPAQVKASSVST 230

Query: 215 AAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEK------- 267
             +P  +AA    G  G    + K      A       +E++++EE S+ EE+       
Sbjct: 231 KESPARKAAPAP-GKVGDVTPQVKGGALPPAKRAKKPEEESESSEEGSESEEEAPAGTRS 289

Query: 268 --KAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEA 325
             KA E      A  AP+   PG            PA    + A A+ ++  +PE   E+
Sbjct: 290 QVKASEKILQVRAASAPAKGTPGK--------GATPAPPGKAGAVASQTKAGKPEEDSES 341

Query: 326 PPAEAAE 332
              E+++
Sbjct: 342 SSEESSD 348



 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 66/311 (21%), Positives = 113/311 (36%), Gaps = 20/311 (6%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAP 65
           S   A      + P +A  A+SP+ ++    G  +   + S ++ ES ++EE    G A 
Sbjct: 653 SAKVAPVRVGTQAPRKAGTATSPAGSSPAVAGGTQRPAEDSSSSEESDSEEE--KTGLAV 710

Query: 66  AADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGE 125
              + +    G    + S   KG      AP             + E  E    +  E +
Sbjct: 711 TVGQAKSVGKGLQVKAASVPVKGSLGQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESD 770

Query: 126 AASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAE 185
           +  AA+S +  K     T + +N    +     S K +    G    K    A +  +  
Sbjct: 771 SEEAAASPAQVKTSVKKTQAKANPAAARAP---SAKGTISAPG----KVVTAAAQAKQRS 823

Query: 186 APAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAA-- 243
               +            A   A   S  +A A   +A  G E  +G   +E+  +E A  
Sbjct: 824 PSKVKPPVRNPQNSTVLARGPASVPSVGKAVATAAQAQTGPEEDSGSSEEESDSEEEAET 883

Query: 244 VAPEKPPA-SDETKAAEEPSKVEEKKAE------EAGASAAACEAPSAAGPGAPPEQEAA 296
           +A  KP   + + +AA  P+K   +K        + G SAA  +A      G+  E+  +
Sbjct: 884 LAQVKPSGKTHQIRAALAPAKESPRKGAAPTPPGKTGPSAA--QAGKQDDSGSSSEESDS 941

Query: 297 PAEEPAAAAAS 307
             E PAA  ++
Sbjct: 942 DGEAPAAVTSA 952



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 50/219 (22%), Positives = 88/219 (40%), Gaps = 18/219 (8%)

Query: 19  PGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSG 78
           PG+     +  KA  QE+         S  AA S A+ +     +   A+   PAAA + 
Sbjct: 744 PGKTGPTVTQVKAEKQEDSESSEEESDSEEAAASPAQVKTSVKKTQAKAN---PAAARAP 800

Query: 79  AASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGE------AAEPGSPTAAEGEAASAASS 132
           +A  + +  G+   AAA     SP + + P          A  P S  +     A+AA +
Sbjct: 801 SAKGTISAPGKVVTAAAQAKQRSPSKVKPPVRNPQNSTVLARGPASVPSVGKAVATAAQA 860

Query: 133 TSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGF-SFKKNKKEAGEGGEAEAP---- 187
            + P+ ED  +    +++ ++ +     K S K     +     KE+   G A  P    
Sbjct: 861 QTGPE-EDSGSSEEESDSEEEAETLAQVKPSGKTHQIRAALAPAKESPRKGAAPTPPGKT 919

Query: 188 ---AAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAA 223
              AA+ GK + +G ++  +   G A     +A  +E++
Sbjct: 920 GPSAAQAGKQDDSGSSSEESDSDGEAPAAVTSAQDQESS 958


>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
           sapiens]
          Length = 2524

 Score = 70.5 bits (171), Expect = 2e-12
 Identities = 80/290 (27%), Positives = 107/290 (36%), Gaps = 38/290 (13%)

Query: 55  KEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAA 114
           K +++   +A    K+ PAAA   AA P   E  E  A+     G S  E+E   E EA 
Sbjct: 670 KLKMEKERNARRKKKKAPAAASEEAAFPPVVEDEEMEAS-----GVSGNEEEMVEEAEAL 724

Query: 115 EPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKN 174
                    GE +  A+  +S   E  + PSP  E  K              +G +  K 
Sbjct: 725 HASGNEVPRGECSGPATVNNSSDTE--SIPSPHTEAAKD-------------TGQNGPKP 769

Query: 175 KKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDP 234
               G  G    P     +D  A      A+EA  A     A P   A           P
Sbjct: 770 PATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVV------P 823

Query: 235 QEAKPQEAAVAP-------EKPPASDE----TKAAEEPSKVE-EKKAEEAGASAAACEAP 282
           +E K +E A AP       +KPPA++E    T  AEEP K E  ++AEE  A     EA 
Sbjct: 824 KEEKEEETAAAPPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAA 883

Query: 283 SAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEAPPAEAAE 332
            A   GA   ++       A  A SS     S  +    + E   AE  +
Sbjct: 884 EATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGD 933



 Score = 56.2 bits (134), Expect = 4e-08
 Identities = 82/351 (23%), Positives = 123/351 (35%), Gaps = 53/351 (15%)

Query: 2    GAQFSKTAAKGEAAAERPGEAAVASSPSKANGQENGH------VKVNGDASPAAAESGAK 55
            G +  +    G A      +     SP     ++ G         +  D  P    +   
Sbjct: 728  GNEVPRGECSGPATVNNSSDTESIPSPHTEAAKDTGQNGPKPPATLGADGPPPGPPTPPP 787

Query: 56   EELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAE 115
            E++      PA  +  PA+  +GA +P       P A  +P A    V KE   E  AA 
Sbjct: 788  EDI------PAPTEPTPASEATGAPTP-------PPAPPSPSAPPPVVPKEEKEEETAAA 834

Query: 116  PGSPTAAEGEAASAAS-STSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKN 174
            P      E +  +A   +  + KAE+      + E  +   K    + +   +  + K  
Sbjct: 835  PPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKGKDAEAAEATAEGALKAE 894

Query: 175  KKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASG---EQAAAPGEEAAAGEEGAAG 231
            KKE G  G A    + G   ++   A  +A E   A G    +  +P             
Sbjct: 895  KKEGG-SGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRPSLL-----TPT 948

Query: 232  GDPQEAKPQEAAVAPEKPPASDETK--AAEEP---SKVEEKKAEEAGASAAACEAPSAAG 286
            GDP+      A  +P+KP    + K  AA  P   +KV E   E+A        AP+   
Sbjct: 949  GDPR------ANASPQKPLDLKQLKQRAAAIPPIVTKVHEPPREDA--------APTKPA 994

Query: 287  PGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEAP-----PAEAAE 332
            P APP  +    E  A     S+    S+   P    EA      PA AAE
Sbjct: 995  PPAPPPPQNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAE 1045


>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
          Length = 686

 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 95/362 (26%), Positives = 135/362 (37%), Gaps = 50/362 (13%)

Query: 2   GAQFSKTAAKGEAAAERPGEAAVASSP-SKANGQENGHVKVNGDASPAAAESGAKEELQA 60
           G++ ++ A +G AA +  G       P ++A G    H +         AE GA E    
Sbjct: 43  GSEGAEEAPRGAAAVKEAGGGGPDRGPEAEARGTRGAHGETE-------AEEGAPE---- 91

Query: 61  NGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPT 120
               P   +E   A     ASP    +GEP      EA   P +  AP   E AE   P 
Sbjct: 92  GAEVPQGGEETSGAQQVEGASPGRGAQGEPRG----EAQREPEDSAAPERQEEAEQ-RPE 146

Query: 121 AAEGEAASAASST---SSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKE 177
             EG A+  A  +     P  ++     P+ ++ + + +      +   +G S    +  
Sbjct: 147 VPEGSASGEAGDSVDAEGPLGDNIEAEGPAGDSVEAEGRVGDSVDAEGPAGDSVDA-EGP 205

Query: 178 AGEGGEAEAPA-----AEG--GKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAG-EEGA 229
            G+  +AE PA     AEG  G    A G A  + +A    G+   A G+ A  G E G 
Sbjct: 206 LGDNIQAEGPAGDSVDAEGRVGDSVDAEGPAGDSVDAEGRVGDSVEA-GDPAGDGVEAGV 264

Query: 230 AGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSK------------VEEKKAEEAGAS-- 275
             GD  EA+         + PA    + + EP +            +E    E AG S  
Sbjct: 265 PAGDSVEAEGPAGDSMDAEGPAGRARRVSGEPQQSGDGSLSPQAEAIEVAAGESAGRSPG 324

Query: 276 -AAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQ-----EAQPECSPEAPPAE 329
             A   A  A  PG    +EAAP +  A A        P Q     E + E SPE P  E
Sbjct: 325 ELAWDAAEEAEVPGVKGSEEAAPGDARADAGEDRVGDGPQQEPGEDEERRERSPEGPREE 384

Query: 330 AA 331
            A
Sbjct: 385 EA 386



 Score = 55.5 bits (132), Expect = 7e-08
 Identities = 60/229 (26%), Positives = 87/229 (37%), Gaps = 29/229 (12%)

Query: 15  AAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKE--EP 72
           A  R G++  A  P+  +G E G     GD+    AE  A + + A G A  A +   EP
Sbjct: 242 AEGRVGDSVEAGDPA-GDGVEAGVPA--GDS--VEAEGPAGDSMDAEGPAGRARRVSGEP 296

Query: 73  AAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASS 132
             +G G+ SP A        AA   AG SP E    A  EA  PG   + E     A + 
Sbjct: 297 QQSGDGSLSPQAEAI---EVAAGESAGRSPGELAWDAAEEAEVPGVKGSEEAAPGDARAD 353

Query: 133 TSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGG 192
               +  DG    P  +  ++++              S +  ++E   GGE E+P     
Sbjct: 354 AGEDRVGDGPQQEPGEDEERRER--------------SPEGPREEEAAGGEEESP----- 394

Query: 193 KDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQE 241
                G A+  AAE  A      A  G    +GE     G  ++ +  E
Sbjct: 395 DSSPHGEASRGAAEPEAQLSNHLAEEGPAEGSGEAARVNGRREDGEASE 443



 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 42/153 (27%), Positives = 57/153 (37%), Gaps = 12/153 (7%)

Query: 179 GEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAK 238
           G  G  E PA      E  G   AA  EA    G + A      AA  + A GG P    
Sbjct: 13  GPQGPPEVPAPLA---ERPGEPGAAGGEAEGPEGSEGAEEAPRGAAAVKEAGGGGPDRGP 69

Query: 239 PQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPA 298
             EA         ++  + A E ++V +   E +GA      +P   G GA  E      
Sbjct: 70  EAEARGTRGAHGETEAEEGAPEGAEVPQGGEETSGAQQVEGASP---GRGAQGEPRGEAQ 126

Query: 299 EEPAAAAASSACAAPSQEAQPECSPEAPPAEAA 331
            EP  +      AAP ++ + E  PE P   A+
Sbjct: 127 REPEDS------AAPERQEEAEQRPEVPEGSAS 153



 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 57/244 (23%), Positives = 80/244 (32%), Gaps = 49/244 (20%)

Query: 67  ADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEA 126
           A+  EP     G   P   E   P A    E GA+  E E P   E AE     AA  + 
Sbjct: 2   AEAAEPEGVAPGPQGPP--EVPAPLAERPGEPGAAGGEAEGPEGSEGAEEAPRGAAAVKE 59

Query: 127 ASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEA 186
           A        P+AE   T     ET                          EA EG    A
Sbjct: 60  AGGGGPDRGPEAEARGTRGAHGET--------------------------EAEEGAPEGA 93

Query: 187 PAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQE-AKPQEAAVA 245
              +GG+            E   A   + A+PG  A     G A  +P++ A P+    A
Sbjct: 94  EVPQGGE------------ETSGAQQVEGASPGRGAQGEPRGEAQREPEDSAAPERQEEA 141

Query: 246 PEKPPASDETKAAEEPSKVEEK-----KAEEAGASAAACEAPSAAGPGAP---PEQEAAP 297
            ++P   + + + E    V+ +       E  G +  + EA    G       P  ++  
Sbjct: 142 EQRPEVPEGSASGEAGDSVDAEGPLGDNIEAEGPAGDSVEAEGRVGDSVDAEGPAGDSVD 201

Query: 298 AEEP 301
           AE P
Sbjct: 202 AEGP 205



 Score = 38.5 bits (88), Expect = 0.008
 Identities = 42/129 (32%), Positives = 52/129 (40%), Gaps = 9/129 (6%)

Query: 201 AAAAAEAGAASGEQAA----APGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETK 256
           A AA   G A G Q      AP  E   GE GAAGG+ +   P+ +  A E P  +   K
Sbjct: 2   AEAAEPEGVAPGPQGPPEVPAPLAERP-GEPGAAGGEAE--GPEGSEGAEEAPRGAAAVK 58

Query: 257 AAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQE 316
            A         +AE  G   A  E  + A  GAP   E     E  + A     A+P + 
Sbjct: 59  EAGGGGPDRGPEAEARGTRGAHGE--TEAEEGAPEGAEVPQGGEETSGAQQVEGASPGRG 116

Query: 317 AQPECSPEA 325
           AQ E   EA
Sbjct: 117 AQGEPRGEA 125


>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
          Length = 1427

 Score = 65.5 bits (158), Expect = 6e-11
 Identities = 97/358 (27%), Positives = 131/358 (36%), Gaps = 56/358 (15%)

Query: 8    TAAKGEAAAERPGE-AAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPA 66
            TAA   +  E P   AA   +P +               SPAAA    +E      + P 
Sbjct: 989  TAAVRVSTPEEPASPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPPPEEPTSPAAAVPT 1048

Query: 67   ADKE-EPAAA--------GSGAASPSAAEKGEPAAAA-APEAGASPVEK----EAPAEGE 112
             ++   PAAA           AA P+  E   PAAA   PE   SP       E P    
Sbjct: 1049 PEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPA 1108

Query: 113  AA-----EPGSPTAAEGEAASAASSTSS-PKAEDGATPSPSNETPKKKKKRFSFKKSFKL 166
            AA     EP SP AA       AS  ++ P  E+ A P+P+  TP++             
Sbjct: 1109 AAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAPAVPTPEESAS---------- 1158

Query: 167  SGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGE 226
            +  +    ++ A        PA     + A+  A  A  E   +       P    A  E
Sbjct: 1159 AAVAVPTPEESASPAAAVPTPA-----ESASFAAVVATLEEPTSPAASVPTPAAMVATLE 1213

Query: 227  E--GAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSA 284
            E    A   P   +P   A A   P     + AA  P+  E   +  A  +     +P+A
Sbjct: 1214 EFTSPAASVPTSEEPASLAAAVSNPE-EPTSPAAAVPTLEEPTSSAAAVLTPEELSSPAA 1272

Query: 285  AGPGAPPEQEAAPA------EEPAAAAASSACAAPSQE--AQPECS---PEAPPAEAA 331
            + P   PE+ A+PA      EEPA+ AA    A P+ E  A P  S   PE P   AA
Sbjct: 1273 SVP--TPEEPASPAAAVSNLEEPASPAA----AVPTPEVAAIPAASVPTPEVPAIPAA 1324



 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 72/318 (22%), Positives = 106/318 (33%), Gaps = 36/318 (11%)

Query: 9    AAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAAD 68
            AA      E    AA   +P +               SPAAA    +E   A+ +A    
Sbjct: 1069 AAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEP--ASPAAAVPT 1126

Query: 69   KEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAAS 128
             EEPA+  +   +P       PA     E+ ++ V    P E  +     PT AE  + +
Sbjct: 1127 PEEPASPAAAVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAVPTPAESASFA 1186

Query: 129  AASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPA 188
            A  +T     E+  +P+ S  TP                               E  +PA
Sbjct: 1187 AVVAT----LEEPTSPAASVPTPAAMVATLE-----------------------EFTSPA 1219

Query: 189  AEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEK 248
            A     E     AAA +     +   AA P  E       A     + + P  +   PE+
Sbjct: 1220 ASVPTSEEPASLAAAVSNPEEPTSPAAAVPTLEEPTSSAAAVLTPEELSSPAASVPTPEE 1279

Query: 249  P--PASDETKAAEEPSKVEEKKAEEAGASAAAC----EAPSAAGPGAPPEQEAAPAEEPA 302
            P  PA+  +   E  S        E  A  AA     E P+      PP +E +P   P 
Sbjct: 1280 PASPAAAVSNLEEPASPAAAVPTPEVAAIPAASVPTPEVPAIPAAAVPPMEEVSPIGVPF 1339

Query: 303  AAAASSACAAP-SQEAQP 319
               ++   + P S+E  P
Sbjct: 1340 LGVSAHTDSVPISEEGTP 1357



 Score = 58.2 bits (139), Expect = 1e-08
 Identities = 98/345 (28%), Positives = 128/345 (37%), Gaps = 56/345 (16%)

Query: 8    TAAKGEAAAERPGEAAV-ASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPA 66
            T A    A E P  AAV  S+P +              ASPAAA    +E      + P 
Sbjct: 976  TPATTVHAPEEPDTAAVRVSTPEEP-------------ASPAAAVPTPEEPTSPAAAVPT 1022

Query: 67   ADKEEPAAAGSGAASPSAAEKGEPAAAA-APEAGASPVEKEAPAEGEAAEPGSPTAA--- 122
               EEP +    AA P   E   PAAA   PE   SP    A A     EP SP AA   
Sbjct: 1023 P--EEPTSPA--AAVPPPEEPTSPAAAVPTPEEPTSP----AAAVPTPEEPTSPAAAVPT 1074

Query: 123  ---EGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAG 179
                   A+A  +   P +   A P+P  E P          +       +    ++ A 
Sbjct: 1075 PEEPTSPAAAVPTPEEPTSPAAAVPTP--EEPTSPAAAVPTPEEPASPAAAVPTPEEPAS 1132

Query: 180  EGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKP 239
                   P      +E A  A A      +AS   A    EE+A+    AA   P E+  
Sbjct: 1133 PAAAVPTP------EEPAFPAPAVPTPEESASAAVAVPTPEESAS--PAAAVPTPAESAS 1184

Query: 240  QEAAVA----PEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEA 295
              A VA    P  P AS  T AA   +   E+    A +   + E  S A   + PE+  
Sbjct: 1185 FAAVVATLEEPTSPAASVPTPAAMVATL--EEFTSPAASVPTSEEPASLAAAVSNPEEPT 1242

Query: 296  APA------EEPAAAAASSACAAPSQEAQPECS---PEAPPAEAA 331
            +PA      EEP ++AA  A   P + + P  S   PE P + AA
Sbjct: 1243 SPAAAVPTLEEPTSSAA--AVLTPEELSSPAASVPTPEEPASPAA 1285



 Score = 55.5 bits (132), Expect = 7e-08
 Identities = 88/336 (26%), Positives = 119/336 (35%), Gaps = 62/336 (18%)

Query: 7    KTAAKGEAAAERPGEAAVAS-SPSKAN-------GQENGHVKVNGDASPAAAESGAKEEL 58
            +TA    AA  + G +AVA  SP  A         +E+G  +  G  +PA      +E  
Sbjct: 931  ETAPAVAAAITQEGMSAVAGFSPEWAALAITVPITEEDGTPE--GPVTPATTVHAPEEPD 988

Query: 59   QANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAA-APEAGASPVEKEAPAEGEAAEPG 117
             A  +   +  EEPA+    AA P+  E   PAAA   PE   SP     P E    EP 
Sbjct: 989  TA--AVRVSTPEEPASPA--AAVPTPEEPTSPAAAVPTPEEPTSPAAAVPPPE----EPT 1040

Query: 118  SPTAAEGEAASAASSTSS-PKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKK 176
            SP AA        S  ++ P  E+  +P+ +  TP+                        
Sbjct: 1041 SPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPE------------------------ 1076

Query: 177  EAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQE 236
                  E  +PAA     E     AAA       +   AA P  E  A    A     + 
Sbjct: 1077 ------EPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTPEEP 1130

Query: 237  AKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAA 296
            A P  A   PE+P       A   P+  E   A  A  +     +P+AA P         
Sbjct: 1131 ASPAAAVPTPEEPAFP----APAVPTPEESASAAVAVPTPEESASPAAAVP--------T 1178

Query: 297  PAEEPAAAAASSACAAPSQEAQPECSPEAPPAEAAE 332
            PAE  + AA  +    P+  A    +P A  A   E
Sbjct: 1179 PAESASFAAVVATLEEPTSPAASVPTPAAMVATLEE 1214



 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 75/296 (25%), Positives = 105/296 (35%), Gaps = 47/296 (15%)

Query: 63   SAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPV-----------------EK 105
            + PA     P    + AA  S  E     AAA  + G S V                 E+
Sbjct: 908  TVPAVTVSVPEGTAAVAAVSSPEETAPAVAAAITQEGMSAVAGFSPEWAALAITVPITEE 967

Query: 106  EAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFK 165
            +   EG    P +   A  E  +AA   S+P  E+ A+P+ +  TP++     +   + +
Sbjct: 968  DGTPEGPVT-PATTVHAPEEPDTAAVRVSTP--EEPASPAAAVPTPEEPTSPAAAVPTPE 1024

Query: 166  LSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAG 225
                             E  +PAA     E     AAA       +   AA P  E    
Sbjct: 1025 -----------------EPTSPAAAVPPPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTS 1067

Query: 226  EEGAAGGDPQEAKPQEAAVAPEKP--PASDETKAAEEPSKVEEKKAEEAGASAAAC---- 279
               A     +   P  A   PE+P  PA+      E  S        E  AS AA     
Sbjct: 1068 PAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPASPAAAVPTP 1127

Query: 280  EAPSAAGPGAP-PEQEA--APAEEPAAAAASSACAAPSQEAQPECSPEAP-PAEAA 331
            E P++     P PE+ A  APA      +AS+A A P+ E     +   P PAE+A
Sbjct: 1128 EEPASPAAAVPTPEEPAFPAPAVPTPEESASAAVAVPTPEESASPAAAVPTPAESA 1183



 Score = 38.9 bits (89), Expect = 0.006
 Identities = 53/216 (24%), Positives = 72/216 (33%), Gaps = 18/216 (8%)

Query: 130  ASSTSSPKAEDG----ATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAE 185
            A   + P  E+G    A P+P           F  +     S  S ++    A      E
Sbjct: 846  ALDAALPSPEEGTSIAAVPAPEGTAVVAALVPFPHEDILVASIVSLEEEDVTAAAVSAPE 905

Query: 186  APAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEG---AAGGDPQEAKPQ-- 240
                         G AA AA     S  +  AP   AA  +EG    AG  P+ A     
Sbjct: 906  RATVPAVTVSVPEGTAAVAA----VSSPEETAPAVAAAITQEGMSAVAGFSPEWAALAIT 961

Query: 241  ----EAAVAPEKPPASDET-KAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEA 295
                E    PE P     T  A EEP     + +     ++ A   P+   P +P     
Sbjct: 962  VPITEEDGTPEGPVTPATTVHAPEEPDTAAVRVSTPEEPASPAAAVPTPEEPTSPAAAVP 1021

Query: 296  APAEEPAAAAASSACAAPSQEAQPECSPEAPPAEAA 331
             P E  + AAA      P+  A    +PE P + AA
Sbjct: 1022 TPEEPTSPAAAVPPPEEPTSPAAAVPTPEEPTSPAA 1057


>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
          Length = 2968

 Score = 65.5 bits (158), Expect = 6e-11
 Identities = 67/328 (20%), Positives = 128/328 (39%), Gaps = 28/328 (8%)

Query: 9    AAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAAD 68
            A + +    R  E + A  P +   +    VK++ +   +     AKE L       A  
Sbjct: 2432 ATRPKPKKARAAEESGAKGPRRPGEEAELLVKLDHEGVTSPKSKKAKEALLLREDPGAGG 2491

Query: 69   KEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEG----EAAEPGSPTAAEG 124
             +EP +  S  + P AA   EP A   P+A    + +E P  G    ++  P SP  A+ 
Sbjct: 2492 WQEPKSLLSLGSYPPAAGSSEPKAPW-PKATDGDLAQE-PGPGLTFEDSGNPKSPDKAQA 2549

Query: 125  EAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEA 184
            E   A  S SS  +  G++ S S+ +                S  S  + ++E  + G+ 
Sbjct: 2550 EQDGAEESESSSSSSSGSSSSSSSSS----------------SSGSETEGEEEGDKNGDG 2593

Query: 185  EAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAV 244
                  GG++ +A  + AA+  + ++S   +++    +++    ++      +    ++ 
Sbjct: 2594 GC--GTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2651

Query: 245  APEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAA 304
            +     +S  + ++   S     +     +   A  AP+A GP A   Q A P +    A
Sbjct: 2652 SSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTA-GPSA---QAALPTKATKQA 2707

Query: 305  AASSACAAPSQEAQPECSPEAPPAEAAE 332
              +   A    +  P   P+APP +  +
Sbjct: 2708 GKARPSAHSPGKKTPAPQPQAPPPQPTQ 2735



 Score = 55.8 bits (133), Expect = 5e-08
 Identities = 53/241 (21%), Positives = 96/241 (39%), Gaps = 24/241 (9%)

Query: 16   AERPG------EAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADK 69
            A+ PG      ++    SP KA  +++G  +    +S ++  S +     ++GS    ++
Sbjct: 2526 AQEPGPGLTFEDSGNPKSPDKAQAEQDGAEESESSSSSSSGSSSSSSSSSSSGSETEGEE 2585

Query: 70   EEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASA 129
            E       G  +      G    +AA    ASP          A+   S +++   ++S+
Sbjct: 2586 EGDKNGDGGCGT------GGRNCSAASSRAASP----------ASSSSSSSSSSSSSSSS 2629

Query: 130  ASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAA 189
            +SS+SS  +   ++ S S+ +        S   S   S  S   ++  +    +  APA 
Sbjct: 2630 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAP 2689

Query: 190  EGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDP-QEAKPQEAAVAPEK 248
              G    A     A  +AG A    A +PG++  A +  A    P Q  +P+  A A  +
Sbjct: 2690 TAGPSAQAALPTKATKQAGKAR-PSAHSPGKKTPAPQPQAPPPQPTQPLQPKAQAGAKSR 2748

Query: 249  P 249
            P
Sbjct: 2749 P 2749



 Score = 52.0 bits (123), Expect = 7e-07
 Identities = 58/281 (20%), Positives = 97/281 (34%), Gaps = 17/281 (6%)

Query: 6    SKTAAKGEAAAERPGEA---------AVASSPSKANGQENGHVKVNGDASPAAAESGAKE 56
            SK A +     E PG           ++ S P  A   E             A E G   
Sbjct: 2474 SKKAKEALLLREDPGAGGWQEPKSLLSLGSYPPAAGSSEPKAPWPKATDGDLAQEPGPGL 2533

Query: 57   ELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEP 116
              + +G+  + DK +    G+   S S++     +++++  + +S  E E   EG+    
Sbjct: 2534 TFEDSGNPKSPDKAQAEQDGA-EESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGD 2592

Query: 117  G-------SPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGF 169
            G       + +AA   AAS ASS+SS  +   ++ S S+ +        S   S   S  
Sbjct: 2593 GGCGTGGRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2652

Query: 170  SFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGA 229
            S   +   +     + + +        +    AA A     S + A        AG+   
Sbjct: 2653 SSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKARP 2712

Query: 230  AGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAE 270
            +   P +  P     AP   P       A+  +K   KK E
Sbjct: 2713 SAHSPGKKTPAPQPQAPPPQPTQPLQPKAQAGAKSRPKKRE 2753



 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 64/308 (20%), Positives = 105/308 (34%), Gaps = 47/308 (15%)

Query: 67   ADKEEPAAAGSGAA-SPSAAEKGE--------------PAAAAAPEAGASPVEKEAP--- 108
            A  EEP A   G    PSA  KG+              P+   A E  ++P  K++P   
Sbjct: 2320 AGSEEPGAKARGRGRKPSAKAKGDRAATLEEGNPTDEVPSTPLALEPSSTPGSKKSPPEP 2379

Query: 109  ----AEGEAAEPGSPTAAEGEAASAASSTSSPKAE-----DGATPSPSNETPKKKKKRFS 159
                A+   A P  P  +    A  +     P AE         P+P    P  + K   
Sbjct: 2380 VDKRAKAPKARPAPPQPSPAPPAFTSCPAPEPFAELPAPATSLAPAPLITMPATRPK--- 2436

Query: 160  FKKSFKLSGFSFKKNKKEAGEGGE---------AEAPAAEGGK-------DEAAGGAAAA 203
              K  + +  S  K  +  GE  E           +P ++  K       D  AGG    
Sbjct: 2437 -PKKARAAEESGAKGPRRPGEEAELLVKLDHEGVTSPKSKKAKEALLLREDPGAGGWQEP 2495

Query: 204  AAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSK 263
             +     S   AA   E  A   +   G   QE  P         P + D+ +A ++ ++
Sbjct: 2496 KSLLSLGSYPPAAGSSEPKAPWPKATDGDLAQEPGPGLTFEDSGNPKSPDKAQAEQDGAE 2555

Query: 264  VEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPECSP 323
              E  +  +  S+++  + S++G     E+E     +         C+A S  A    S 
Sbjct: 2556 ESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAASPASS 2615

Query: 324  EAPPAEAA 331
             +  + ++
Sbjct: 2616 SSSSSSSS 2623



 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 56/194 (28%), Positives = 74/194 (38%), Gaps = 41/194 (21%)

Query: 142  ATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAA 201
            A PSP+   P  K++               +K  K+ GEG        +GG    AG   
Sbjct: 2289 AEPSPALLVPSAKRRS--------------RKTSKDTGEG-------KDGG---TAGSEE 2324

Query: 202  AAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEP 261
              A   G      A A G+ AA  EE   G    E      A+ P   P S ++     P
Sbjct: 2325 PGAKARGRGRKPSAKAKGDRAATLEE---GNPTDEVPSTPLALEPSSTPGSKKS-----P 2376

Query: 262  SKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAA---AAASSACAAPSQEAQ 318
             +  +K+A+    +  A  AP    P APP   + PA EP A   A A+S   AP     
Sbjct: 2377 PEPVDKRAK----APKARPAPPQPSP-APPAFTSCPAPEPFAELPAPATSLAPAP-LITM 2430

Query: 319  PECSPEAPPAEAAE 332
            P   P+   A AAE
Sbjct: 2431 PATRPKPKKARAAE 2444



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 61/260 (23%), Positives = 92/260 (35%), Gaps = 33/260 (12%)

Query: 1    MGAQFSKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQA 60
            +G +F  T ++ E    +   A +   P K  G+           S AA   GA+     
Sbjct: 1906 LGTEFEYTDSESEVKVRKRSPAGLLR-PKKGLGEPG--------PSLAAPTPGAR----- 1951

Query: 61   NGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPT 120
             G  P++  +   A   G  +       EP   A PEA    +     +E       S  
Sbjct: 1952 -GPDPSSPDKAKLAVEKGRKARKLRGPKEPGFEAGPEASDDDLWTRRRSERIFLHDAS-- 2008

Query: 121  AAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGE 180
            AA     S A +T + +   G   SP  +  + K ++   KK          K  KEAG 
Sbjct: 2009 AAAPAPVSTAPATKTSRCAKGGPLSPRKDAGRAKDRKDPRKK----------KKGKEAGP 2058

Query: 181  GGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQ 240
            G     P A     EA    A  A+   AA   +A A G+E      G  G     +K  
Sbjct: 2059 GAGLPPPRAPALPSEA---RAPHASSLTAAKRSKAKAKGKEVKKENRGKGGA---VSKLM 2112

Query: 241  EAAVAPEKPPASDETKAAEE 260
            E+  A E    + ++  +E+
Sbjct: 2113 ESMAAEEDFEPNQDSSFSED 2132



 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 32/151 (21%), Positives = 62/151 (41%), Gaps = 6/151 (3%)

Query: 2    GAQFSKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQAN 61
            G   S  +++  + A     ++ +SS S ++   +     +  +S +++ S +     ++
Sbjct: 2599 GRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2658

Query: 62   GSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAA----EPG 117
             S+ ++     ++     +S S+ ++  PA  A P A A+   K     G+A      PG
Sbjct: 2659 SSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKARPSAHSPG 2718

Query: 118  SPTAAEGEAASAASSTS--SPKAEDGATPSP 146
              T A    A     T    PKA+ GA   P
Sbjct: 2719 KKTPAPQPQAPPPQPTQPLQPKAQAGAKSRP 2749



 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 31/150 (20%), Positives = 62/150 (41%), Gaps = 2/150 (1%)

Query: 6    SKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAP 65
            S +++   +++     ++ +SS S ++   +     +  +S +++ S +      + S  
Sbjct: 2621 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSCS 2680

Query: 66   AADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGE 125
            + D+  PA     +A  +   K    A  A  +  SP  K+ PA    A P  PT     
Sbjct: 2681 SDDEAAPAPTAGPSAQAALPTKATKQAGKARPSAHSP-GKKTPAPQPQAPPPQPTQPLQP 2739

Query: 126  AASAASSTSSPKAEDGATPSPSNETPKKKK 155
             A A +  S PK  +G     + E  K+++
Sbjct: 2740 KAQAGAK-SRPKKREGVHLPTTKELAKRQR 2768



 Score = 39.7 bits (91), Expect = 0.004
 Identities = 63/280 (22%), Positives = 101/280 (36%), Gaps = 40/280 (14%)

Query: 79   AASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKA 138
            A SP A+E    +     E     ++ E PA+G ++   +P+      A  + +   PK 
Sbjct: 1718 AHSPFASEVSSYSYNTDSEEDEEFLKDEWPAQGPSSSKLTPSLLCSMVAKNSKAAGGPKL 1777

Query: 139  EDGATPSPSNETPK---KKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAE----G 191
                  +P    PK    +K+ F        +  SF  + +E+ +  E+     E     
Sbjct: 1778 TKRGLAAPRTLKPKPATSRKQPFCLLLREAEARSSFSDSSEESFDQDESSEEEDEEEELE 1837

Query: 192  GKDEAAGGAAAAAAEAGAASGEQAAAPG-EEAAAG--EEGAAGGDPQ------------E 236
             +DEA+GG     A       E+A +PG EE+  G     AA   P             E
Sbjct: 1838 EEDEASGGGYRLGAR------ERALSPGLEESGLGLLARFAASALPSPTVGPSLSVVQLE 1891

Query: 237  AKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAG-----------ASAAACEAPSAA 285
            AK +       +     E +  +  S+V+ +K   AG             + A   P A 
Sbjct: 1892 AKQKARKKEERQSLLGTEFEYTDSESEVKVRKRSPAGLLRPKKGLGEPGPSLAAPTPGAR 1951

Query: 286  GPG-APPEQEAAPAEEPAAAAASSACAAPSQEAQPECSPE 324
            GP  + P++     E+   A        P  EA PE S +
Sbjct: 1952 GPDPSSPDKAKLAVEKGRKARKLRGPKEPGFEAGPEASDD 1991



 Score = 39.3 bits (90), Expect = 0.005
 Identities = 76/337 (22%), Positives = 110/337 (32%), Gaps = 48/337 (14%)

Query: 13  EAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEP 72
           EA  ERPG   +AS    A  +E               E+G    LQA   +P      P
Sbjct: 379 EAFDERPGPIQIASQARDARARER--------------EAGRPGVLQAPPGSP-----RP 419

Query: 73  AAAGSGAASPSAAEKG--EPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAA 130
                G    ++  +    P  A AP   A+    +  A   A E   P A       A 
Sbjct: 420 LDRPEGLREKNSVIRSLKRPPPADAPTVRATRASPDPRAYVPAKELLKPEADPRPCERAP 479

Query: 131 SSTSSPKAEDGATP---SPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAP 187
              + P A+  A      P    P   + ++   K F+L  F+  +    A +   + A 
Sbjct: 480 RGPAGPAAQQAAKLFGLEPGRPPPTGPEHKW---KPFELGNFAATQMAVLAAQHHHSRA- 535

Query: 188 AAEGGKDEAAGGAAAAAAEA----GAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQ--- 240
                ++EAA  AA+++ +A    GA     AA  G   A     A G     A      
Sbjct: 536 -----EEEAAVVAASSSKKAYLDPGAVLPRSAATCGRPVADMHSAAHGSGEASAMQSLIK 590

Query: 241 ------EAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQE 294
                   AVA        ++      +   E     AGAS A    P + GP A   ++
Sbjct: 591 YSGSFARDAVAVRPGGCGKKSPFGGLGTMKPEPAPTSAGASRAQARLPHSGGPAAGGGRQ 650

Query: 295 AAPAEEPAAAAASSACAAPSQEAQPECSPEAPPAEAA 331
                +P    ++ A       AQ E     PP   A
Sbjct: 651 L--KRDPERPESAKAFGREGSGAQGEAEVRHPPVGIA 685



 Score = 37.0 bits (84), Expect = 0.024
 Identities = 68/285 (23%), Positives = 93/285 (32%), Gaps = 32/285 (11%)

Query: 49  AAESGAKEELQANGSAPAADKEE-----PAAAGSGAASPSAAEKGEPAAAAAPEAGASPV 103
           A   GAKE  + +  A    + E     P    S    P A  KG PA  AA  AG   V
Sbjct: 300 AGRGGAKEAARQDEGARLLRRTETLLPGPRPCPSPLPPPPAPPKGPPAPPAATPAGVYTV 359

Query: 104 EKEAPAEGEAAEPGSPTAAEG--------EAASAASSTSSPKAEDG---------ATPSP 146
            +E   E     P    + E         + AS A    + + E G          +P P
Sbjct: 360 FREQGREHRVVAPTFVPSVEAFDERPGPIQIASQARDARAREREAGRPGVLQAPPGSPRP 419

Query: 147 SNETPKKKKKRFSFKKSFKLSGFSFKKNKK--EAGEGGEAEAPAAEGGKDEAAGGAAAAA 204
            +  P+  +++ S  +S K    +     +   A     A  PA E  K EA       A
Sbjct: 420 LDR-PEGLREKNSVIRSLKRPPPADAPTVRATRASPDPRAYVPAKELLKPEADPRPCERA 478

Query: 205 AEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKV 264
                      A P  + AA   G   G P    P+      E    +    A       
Sbjct: 479 PRG-------PAGPAAQQAAKLFGLEPGRPPPTGPEHKWKPFELGNFAATQMAVLAAQHH 531

Query: 265 EEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSA 309
             +  EEA   AA+    +   PGA   + AA    P A   S+A
Sbjct: 532 HSRAEEEAAVVAASSSKKAYLDPGAVLPRSAATCGRPVADMHSAA 576



 Score = 36.6 bits (83), Expect = 0.032
 Identities = 71/311 (22%), Positives = 105/311 (33%), Gaps = 68/311 (21%)

Query: 65   PAADKEEP------AAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEG------- 111
            PA  +++P       A    + S S+ E  +   ++  E     +E+E  A G       
Sbjct: 1792 PATSRKQPFCLLLREAEARSSFSDSSEESFDQDESSEEEDEEEELEEEDEASGGGYRLGA 1851

Query: 112  --EAAEPGSPTAAEGEAAS-AASSTSSPKAEDGAT--PSPSNETPKKKKKRFSFK----- 161
               A  PG   +  G  A  AAS+  SP      +     + +  +KK++R S       
Sbjct: 1852 RERALSPGLEESGLGLLARFAASALPSPTVGPSLSVVQLEAKQKARKKEERQSLLGTEFE 1911

Query: 162  --------KSFKLSGFSFKKNKKEAGEGGEAEAPAAEG--GKDEAAGGAAAAAAEAGAAS 211
                    K  K S     + KK  GE G + A    G  G D ++   A  A E G  +
Sbjct: 1912 YTDSESEVKVRKRSPAGLLRPKKGLGEPGPSLAAPTPGARGPDPSSPDKAKLAVEKGRKA 1971

Query: 212  GEQAAAPGEEAAAGEEGAAGG-------------DPQEAKPQEAAVAPEKP--------- 249
             +          AG E +                D   A P   + AP            
Sbjct: 1972 RKLRGPKEPGFEAGPEASDDDLWTRRRSERIFLHDASAAAPAPVSTAPATKTSRCAKGGP 2031

Query: 250  --PASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAAS 307
              P  D  +A +     ++KK +EAG            G G PP +  A   E  A  AS
Sbjct: 2032 LSPRKDAGRAKDRKDPRKKKKGKEAGP-----------GAGLPPPRAPALPSEARAPHAS 2080

Query: 308  SACAAPSQEAQ 318
            S  AA   +A+
Sbjct: 2081 SLTAAKRSKAK 2091



 Score = 35.8 bits (81), Expect = 0.055
 Identities = 71/284 (25%), Positives = 99/284 (34%), Gaps = 67/284 (23%)

Query: 103  VEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSP-KAEDGATPSPSNETPKKKKKRFSFK 161
            ++  A A+ +   P  P  A+G    A S    P +        P  E P+++       
Sbjct: 1099 LQPTAAADADGLAPDVPLPADGPERLALSPEDKPIRLSPSKITEPLREGPEEEP------ 1152

Query: 162  KSFKLSGFSFKKNKKEAGEG--------GEAEAPAAEG-GKDEAAGGAAAAAAEAGA--A 210
                L+    K   ++  EG             PAAE       AGG      EA A  A
Sbjct: 1153 ----LAEREVKAEVEDMDEGPTELPPLESPLPLPAAEAMATPSPAGGCGGGLLEAQALSA 1208

Query: 211  SGEQAAAPGE--EAAAGEEGAAGGDPQEAKPQEAAV--APEKPPASDETKAAEEPSKVE- 265
            +G+  A P E  +   G E      P   +P  AA+    +  P +   +A EEP +V  
Sbjct: 1209 TGQSCAEPSECPDFVEGPEPRVDS-PGRTEPCTAALDLGVQLTPET-LVEAKEEPVEVPV 1266

Query: 266  -----EKKAEEAGASAAA-----------CEAPSAAG--PGAPPEQEAAPA--------- 298
                 E   EE  A  A            C+ P+  G  P   P QEA P          
Sbjct: 1267 AVPVVEAVPEEGLAQVAPSESQPTLEMSDCDVPAGEGQCPSLEP-QEAVPVLGSTCFLEE 1325

Query: 299  ----------EEPAAAAASSACAAPSQEAQPECSPEAPPAEAAE 332
                      E+P A   + A AA   +A+P  SP A  A+A E
Sbjct: 1326 ASSDQFLPSLEDPLAGMNALAAAAELPQARPLPSPGAAGAQALE 1369



 Score = 35.0 bits (79), Expect = 0.093
 Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 5/97 (5%)

Query: 240  QEAAVAPEKPPAS----DETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEA 295
            Q+AA A E   ++    +  KA E  +++EEK ++  G  AA     + AGPG  P +  
Sbjct: 918  QQAAQALELQRSAQLVQERLKAQEHRAEMEEKGSKR-GLEAAGKAGLATAGPGLLPRKPP 976

Query: 296  APAEEPAAAAASSACAAPSQEAQPECSPEAPPAEAAE 332
              A  PA     +    PS  A P  + +A   +  E
Sbjct: 977  GLAAGPAGTYGKAVSPPPSPRASPVAALKAKVIQKLE 1013



 Score = 33.1 bits (74), Expect = 0.35
 Identities = 38/159 (23%), Positives = 51/159 (32%), Gaps = 7/159 (4%)

Query: 175 KKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDP 234
           K  +   G A+  A  GG+     G     A    ASG +      + A  E     G P
Sbjct: 197 KGSSSRDGPAKERAGRGGEPPPLFGKKDPRARGEEASGPRGVVDLTQEARAEGRQDRGPP 256

Query: 235 QEAKPQEAAVAPEKPPASDETKAAEEPSKVE--EKKAEEAGASAAACEAPSAAGPGAPPE 292
           + A+     +A  K        AA +PS +      A + G  A   EA       A  +
Sbjct: 257 RLAERLSPFLAESK-----TKNAALQPSVLTMCNGGAGDVGLPALVAEAGRGGAKEAARQ 311

Query: 293 QEAAPAEEPAAAAASSACAAPSQEAQPECSPEAPPAEAA 331
            E A                PS    P   P+ PPA  A
Sbjct: 312 DEGARLLRRTETLLPGPRPCPSPLPPPPAPPKGPPAPPA 350


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 65.1 bits (157), Expect = 8e-11
 Identities = 91/371 (24%), Positives = 112/371 (30%), Gaps = 53/371 (14%)

Query: 3   AQFSKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANG 62
           +Q + +AA     A R  E   A++ +  N   +G       A PAA   GA     A  
Sbjct: 31  SQLAASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPG---AAP 87

Query: 63  SAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAG------------ASPVEKEAP-A 109
             P A +  P   G     P +  +    A  AP A              +PV   A  A
Sbjct: 88  EPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVA 147

Query: 110 EGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKL--S 167
            G    P  P    G AA AA +   P    G  P P    P       +   S  L  S
Sbjct: 148 AGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNS 207

Query: 168 GFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEE 227
             +          G  A  P     K  A G         GAA+    AAP   AA    
Sbjct: 208 HHAAAPAVSLVNNGPAALLPLP---KPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPA 264

Query: 228 GAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGP 287
             A   P           P   PA   T A   P     +    AGA+ A   AP+A GP
Sbjct: 265 APAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPA--PAPAAGGP 322

Query: 288 ------------------------------GAPPEQEAAPAEEPAAAAASSACAAPSQEA 317
                                          APP  +   A  PA+ AAS       Q A
Sbjct: 323 AGVSGQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGA 382

Query: 318 QPECSPEAPPA 328
            P  +   PPA
Sbjct: 383 LPSPAAVPPPA 393



 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 75/274 (27%), Positives = 86/274 (31%), Gaps = 30/274 (10%)

Query: 64  APAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEG-EAAEPGSPTAA 122
           AP   +   AAAG   A  +    G PA A    AGA P    APAEG   A P  P A 
Sbjct: 44  APRTPEVRAAAAG---ALGNHVVSGSPAGA----AGAGPA---APAEGAPGAAPEPPPA- 92

Query: 123 EGEAASAASSTSSPKAEDGATP-SPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEG 181
            G A         P       P  P+   P   K R   + S   +G         A   
Sbjct: 93  -GRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGS---AGSCAPVPAAAAVAA 148

Query: 182 GEAEAPAAEGGKDEAAGGAAAAAAEAGAASGE-----QAAAPGEEAAAGEEGAAGGDPQE 236
           G   APA          G AA AA AG   G          PG+ A  G      G    
Sbjct: 149 GPEPAPAGPA----KPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAAL 204

Query: 237 AKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAA 296
                AA        +        P         +      A   P+ A P  P    AA
Sbjct: 205 LNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPP----AA 260

Query: 297 PAEEPAAAAASSACAAPSQEAQPECSPEAPPAEA 330
           PA    AAA      AP+  A+P   P  PP  A
Sbjct: 261 PAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAA 294



 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 39/136 (28%), Positives = 49/136 (36%), Gaps = 5/136 (3%)

Query: 199 GAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAA 258
           G+  +   A AA     A    E  A   GA G       P  AA A    PA     AA
Sbjct: 27  GSLESQLAASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAA 86

Query: 259 EEPSKVEEKKAEEAGASAAACEAPS----AAGPGAPPEQEAAPAEEPAAAAASSACAAPS 314
            EP      +    G       +P      AGP APP  +  P  E +A + +   AA +
Sbjct: 87  PEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGP-APPAAKLRPPPEGSAGSCAPVPAAAA 145

Query: 315 QEAQPECSPEAPPAEA 330
             A PE +P  P   A
Sbjct: 146 VAAGPEPAPAGPAKPA 161



 Score = 41.2 bits (95), Expect = 0.001
 Identities = 41/137 (29%), Positives = 55/137 (40%), Gaps = 15/137 (10%)

Query: 2   GAQFSKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQAN 61
           G   +  A    AAA+  G A  A +P+ A G   G   V+G   P AA +     ++A 
Sbjct: 289 GPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAG---GPAGVSGQPGPGAAAAAPAPGVKAE 345

Query: 62  GSAPAADKEEPAA---AGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGS 118
                     PAA   A SG AS +A+    P        GA P    +PA      PG+
Sbjct: 346 SPKRVVQAAPPAAQTLAASGPASTAASMVIGPTM-----QGALP----SPAAVPPPAPGT 396

Query: 119 PTAAEGEAASAASSTSS 135
           PT     AA A + + S
Sbjct: 397 PTGLPKGAAGAVTQSLS 413


>gi|117938759 GNAS complex locus XLas [Homo sapiens]
          Length = 1037

 Score = 63.9 bits (154), Expect = 2e-10
 Identities = 92/372 (24%), Positives = 131/372 (35%), Gaps = 55/372 (14%)

Query: 4   QFSKTAAKGEAAAERPG---EAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQA 60
           Q    A  G  AA  PG   E   A  P+KA  +        G  SP   E+      + 
Sbjct: 180 QVPDLAPGGPGAAGVPGAPPEEPQALRPAKAGSR--------GGYSPPPEET---MPFEL 228

Query: 61  NGSAPAADKEEPAA----AGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEP 116
           +G     D   P      A    +S  AA     A    P A A P+     A G  ++ 
Sbjct: 229 DGEGFGDDSPPPGLSRVIAQVDGSSQFAAVAASSAVRLTPAANAPPLWVPG-AIGSPSQE 287

Query: 117 GSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKS--FKLSGFSFKKN 174
                +    +S     S P  E G+ P+  ++TP               K+SG   K+ 
Sbjct: 288 AVRPPSNFTGSSPWMEISGPPFEIGSAPAGVDDTPVNMDSPPIALDGPPIKVSGAPDKRE 347

Query: 175 KKE----------------AGEGGEAEAP------AAEGGKDEAAGGAAAAAAEAGAASG 212
           + E                A EGG+  +P      A     D AA  A AA A+  + + 
Sbjct: 348 RAERPPVEEEAAEMEGAADAAEGGKVPSPGYGSPAAGAASADTAARAAPAAPADPDSGAT 407

Query: 213 EQAAAPGEEAAAGEEGAAGGDPQE-AKP-----QEAAVAPEKPPASDETKAAEEPSKVEE 266
            +    G   A  + GA   DP   A P      ++  AP+ P   D   A + P+  + 
Sbjct: 408 PEDPDSGTAPADPDSGAFAADPDSGAAPAAPADPDSGAAPDAPADPDSGAAPDAPADPDA 467

Query: 267 KKAEEAGASAAACE------APSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPE 320
             A EA A+ AA E      AP+A   GAP    A+         A+SA  A     +  
Sbjct: 468 GAAPEAPAAPAAAETRAAHVAPAAPDAGAPTAPAASATRAAQVRRAASAAPASGARRKIH 527

Query: 321 CSPEAPPAEAAE 332
             P +P  +AA+
Sbjct: 528 LRPPSPEIQAAD 539



 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 69/262 (26%), Positives = 100/262 (38%), Gaps = 49/262 (18%)

Query: 24  VASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPS 83
           V+ +P K    E   V+        AAE     +    G  P+     PAA   GAAS  
Sbjct: 339 VSGAPDKRERAERPPVEEE------AAEMEGAADAAEGGKVPSPGYGSPAA---GAASAD 389

Query: 84  AAEKGEPAAAAAPEAGASPVEKE---APAEGE----AAEPGSPTAAEGEAASAASSTSSP 136
            A +  PAA A P++GA+P + +   APA+ +    AA+P S     G A +A +   S 
Sbjct: 390 TAARAAPAAPADPDSGATPEDPDSGTAPADPDSGAFAADPDS-----GAAPAAPADPDSG 444

Query: 137 KAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEA 196
            A D      S   P                         +   G   EAPAA    +  
Sbjct: 445 AAPDAPADPDSGAAPDAPA---------------------DPDAGAAPEAPAAPAAAETR 483

Query: 197 AGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETK 256
           A   A AA +AGA +   A+A     AA    AA   P     ++  + P  P    E +
Sbjct: 484 AAHVAPAAPDAGAPTAPAASA---TRAAQVRRAASAAPASGARRKIHLRPPSP----EIQ 536

Query: 257 AAEEPSKVEEKKAEEAGASAAA 278
           AA+ P+    + +   G S ++
Sbjct: 537 AADPPTPRPTRASAWRGKSESS 558



 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 79/276 (28%), Positives = 107/276 (38%), Gaps = 51/276 (18%)

Query: 45  ASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPA-AAAAPE----AG 99
           +SP    SG   E+   GSAPA   + P        SP  A  G P   + AP+    A 
Sbjct: 298 SSPWMEISGPPFEI---GSAPAGVDDTPV----NMDSPPIALDGPPIKVSGAPDKRERAE 350

Query: 100 ASPVEKEAP--------AEG-EAAEPGSPTAAEGEAASAASSTSSPKA----EDGATPS- 145
             PVE+EA         AEG +   PG  + A G A++  ++ ++P A    + GATP  
Sbjct: 351 RPPVEEEAAEMEGAADAAEGGKVPSPGYGSPAAGAASADTAARAAPAAPADPDSGATPED 410

Query: 146 PSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAA 205
           P + T        +F                 A +     APAA    D  A   A A  
Sbjct: 411 PDSGTAPADPDSGAF-----------------AADPDSGAAPAAPADPDSGAAPDAPADP 453

Query: 206 EAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVE 265
           ++GAA    A A  +  AA E  AA   P  A+ + A VAP  P A   T  A   ++  
Sbjct: 454 DSGAAP--DAPADPDAGAAPEAPAA---PAAAETRAAHVAPAAPDAGAPTAPAASATRAA 508

Query: 266 EKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEP 301
           + +     ASAA            PP  E   A+ P
Sbjct: 509 QVRR---AASAAPASGARRKIHLRPPSPEIQAADPP 541



 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 68/290 (23%), Positives = 90/290 (31%), Gaps = 44/290 (15%)

Query: 17  ERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAG 76
           E PG AA  + PS A   E               E    E +       A    E +   
Sbjct: 32  EAPGAAAPGAGPSPAEEMET--------------EPPHNEPIPVENDGEACGPPEVSRPN 77

Query: 77  SGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEG----EAAEPGSPTAAEGEAASAASS 132
               +P+  E G   + + P   A P E E P+ G       +PG P+       +   +
Sbjct: 78  FQVLNPAFREAGAHGSYSPPPEEAMPFEAEQPSLGGFWPTLEQPGFPSGVHAGLEAFGPA 137

Query: 133 TSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGG 192
              P A  GA P     +P  +          +   F F +  +        + P     
Sbjct: 138 LMEPGAFSGARPGLGGYSPPPE----------EAMPFEFDQPAQRGCSQLLLQVP----- 182

Query: 193 KDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQE---AAVAPEKP 249
            D A GG  AA          QA  P   A AG  G     P+E  P E        + P
Sbjct: 183 -DLAPGGPGAAGVPGAPPEEPQALRP---AKAGSRGGYSPPPEETMPFELDGEGFGDDSP 238

Query: 250 P--ASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGA--PPEQEA 295
           P   S      +  S+     A  A     A  AP    PGA   P QEA
Sbjct: 239 PPGLSRVIAQVDGSSQFAAVAASSAVRLTPAANAPPLWVPGAIGSPSQEA 288



 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 67/291 (23%), Positives = 92/291 (31%), Gaps = 46/291 (15%)

Query: 62  GSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVE---------KEAPAEGE 112
           G+  +  ++ P   G     P     G    AAAP AG SP E         +  P E +
Sbjct: 9   GNNMSGQRDIPPEIGEQPEQPPLEAPG----AAAPGAGPSPAEEMETEPPHNEPIPVEND 64

Query: 113 AAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETP--KKKKKRFSFKKSFKLSGFS 170
               G P  +         +     A    +P P    P   ++     F  + +  GF 
Sbjct: 65  GEACGPPEVSRPNFQVLNPAFREAGAHGSYSPPPEEAMPFEAEQPSLGGFWPTLEQPGFP 124

Query: 171 FKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAA-------------- 216
              +      G     P A  G     GG +    EA     +Q A              
Sbjct: 125 SGVHAGLEAFGPALMEPGAFSGARPGLGGYSPPPEEAMPFEFDQPAQRGCSQLLLQVPDL 184

Query: 217 APGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAE----------EPSKVEE 266
           APG   AAG  GA   +PQ  +P +A       P  +ET   E           P  +  
Sbjct: 185 APGGPGAAGVPGAPPEEPQALRPAKAGSRGGYSPPPEETMPFELDGEGFGDDSPPPGLSR 244

Query: 267 KKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEA 317
             A+  G+S  A  A S+A           PA          A  +PSQEA
Sbjct: 245 VIAQVDGSSQFAAVAASSA-------VRLTPAANAPPLWVPGAIGSPSQEA 288



 Score = 38.9 bits (89), Expect = 0.006
 Identities = 49/175 (28%), Positives = 70/175 (40%), Gaps = 42/175 (24%)

Query: 2   GAQFSKTAAKGEAAAER-PGEAAVASSPSKANGQ---ENGHVKVNGD-----ASPAAAES 52
           GA  + TAA+   AA   P   A    P         ++G    + D     A+PA  +S
Sbjct: 384 GAASADTAARAAPAAPADPDSGATPEDPDSGTAPADPDSGAFAADPDSGAAPAAPADPDS 443

Query: 53  GAKEELQAN---GSAPAADKEE-----------PAAAGSGAA--SPSAAEKGEPAAAAAP 96
           GA  +  A+   G+AP A  +            PAAA + AA  +P+A + G P A AA 
Sbjct: 444 GAAPDAPADPDSGAAPDAPADPDAGAAPEAPAAPAAAETRAAHVAPAAPDAGAPTAPAAS 503

Query: 97  EAGASPVEKEA---PAEG--------------EAAEPGSPTAAEGEAASAASSTS 134
              A+ V + A   PA G              +AA+P +P      A    S +S
Sbjct: 504 ATRAAQVRRAASAAPASGARRKIHLRPPSPEIQAADPPTPRPTRASAWRGKSESS 558



 Score = 33.5 bits (75), Expect = 0.27
 Identities = 42/173 (24%), Positives = 55/173 (31%), Gaps = 39/173 (22%)

Query: 195 EAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAP-------- 246
           EA G AA  A  + A   E      E      +G A G P+ ++P    + P        
Sbjct: 32  EAPGAAAPGAGPSPAEEMETEPPHNEPIPVENDGEACGPPEVSRPNFQVLNPAFREAGAH 91

Query: 247 ---EKPPASDETKAAEEPS------KVEEKKAEEAGASAAACEAPSAAGPGA-------- 289
                PP       AE+PS       +E+        +      P+   PGA        
Sbjct: 92  GSYSPPPEEAMPFEAEQPSLGGFWPTLEQPGFPSGVHAGLEAFGPALMEPGAFSGARPGL 151

Query: 290 ----PPEQEAAPAE--EPAAAAASS--------ACAAPSQEAQPECSPEAPPA 328
               PP +EA P E  +PA    S         A   P     P   PE P A
Sbjct: 152 GGYSPPPEEAMPFEFDQPAQRGCSQLLLQVPDLAPGGPGAAGVPGAPPEEPQA 204


>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
           sapiens]
          Length = 699

 Score = 63.5 bits (153), Expect = 2e-10
 Identities = 69/330 (20%), Positives = 126/330 (38%), Gaps = 22/330 (6%)

Query: 2   GAQFSKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQAN 61
           G    K A   +     PG+AA  +S S ++ +E+       D      + G K + +A 
Sbjct: 99  GPPAKKAAVPAKRVGLPPGKAAAKASESSSS-EESSDDDDEEDQKKQPVQKGVKPQAKAA 157

Query: 62  GSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTA 121
                  K  P  A S  +   ++ + EP     P+     V+ +  A  + A   +P  
Sbjct: 158 -------KAPPKKAKSSDSDSDSSSEDEPPKNQKPKITPVTVKAQTKAPPKPAR-AAPKI 209

Query: 122 AEGEAASAASSTSSPKAEDGATPSPSNETPKKK--KKRFSFKKSFKLSGFSFKKNKKEAG 179
           A G+AAS++SS+SS  + D +    +  TPKK   KK+   K   K +    +K+     
Sbjct: 210 ANGKAASSSSSSSSSSSSDDSEEEKAAATPKKTVPKKQVVAKAPVKAATTPTRKSSSSED 269

Query: 180 EGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKP 239
              + E    +  K++    ++     A          P ++A   ++     +    + 
Sbjct: 270 SSSDEEEEQKKPMKNKPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDSSDES 329

Query: 240 QEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAE 299
             ++   +KPP    TKA    +  +   A++A       E+ S +      E + AP++
Sbjct: 330 DSSSEEEKKPP----TKAVVSKATTKPPPAKKAA------ESSSDSSDSDSSEDDEAPSK 379

Query: 300 EPAAAAASSACAAPSQEAQPECSPEAPPAE 329
            PA    +S+         P   P A P +
Sbjct: 380 -PAGTTKNSSNKPAVTTKSPAVKPAAAPKQ 408



 Score = 59.7 bits (143), Expect = 4e-09
 Identities = 67/306 (21%), Positives = 126/306 (41%), Gaps = 40/306 (13%)

Query: 34  QENGHV--KVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPA 91
           Q NG V  K    AS + +E  ++EE +  G  P A K         AA P+      P 
Sbjct: 69  QANGPVAKKAKKKASSSDSEDSSEEEEEVQG--PPAKK---------AAVPAKRVGLPPG 117

Query: 92  AAAAPEAGASPVEKEAPAEGEAAEPGSPT--AAEGEAASAASSTSSPKAEDGATPSPSNE 149
            AAA  + +S  E+ +  + E  +   P     + +A +A +     K+ D  + S S +
Sbjct: 118 KAAAKASESSSSEESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSSDSDSDSSSED 177

Query: 150 TPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGA 209
            P K +K        K++  + K   K   +   A AP    GK  ++  ++++++ +  
Sbjct: 178 EPPKNQKP-------KITPVTVKAQTKAPPKPARA-APKIANGKAASSSSSSSSSSSSDD 229

Query: 210 ASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKA 269
           +  E+AAA  ++    ++  A        P +AA  P +  +S E  +++E  + ++   
Sbjct: 230 SEEEKAAATPKKTVPKKQVVAKA------PVKAATTPTRKSSSSEDSSSDEEEEQKKPMK 283

Query: 270 EEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEA---- 325
            + G  +      S   P APP +++   + P  A         S+++  E    +    
Sbjct: 284 NKPGPYS------SVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSEEEK 337

Query: 326 -PPAEA 330
            PP +A
Sbjct: 338 KPPTKA 343



 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 71/338 (21%), Positives = 133/338 (39%), Gaps = 34/338 (10%)

Query: 7   KTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGA------------ 54
           KT  K +  A+ P +AA   +   ++ +++   +      P   + G             
Sbjct: 241 KTVPKKQVVAKAPVKAATTPTRKSSSSEDSSSDEEEEQKKPMKNKPGPYSSVPPPSAPPP 300

Query: 55  KEELQANGSAPAADKEEPAAAGSGAA----SPSAAEKGEPAAAAAPEAGASPVEKEAPAE 110
           K+ L       A +K++P  +   ++    S S  EK  P  A   +A   P   +  AE
Sbjct: 301 KKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAE 360

Query: 111 GEAAEPGSPTAAEGEAASAASSTSSPKAEDGA--TPSPSNETPKKKKKRFSFKKSFKLSG 168
             +    S ++ + EA S  + T+   +   A  T SP+ +     K+         + G
Sbjct: 361 SSSDSSDSDSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQ--------PVGG 412

Query: 169 FSFKKNKKEAGEGGEAEAPAAEGGKDE--AAGGAAAAAAEAGAASGEQAAAPGEEAAAGE 226
                 +K      E E+ ++E  K +   A     A A+A  +   + A  G   ++ +
Sbjct: 413 GQKLLTRKADSSSSEEESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSD 472

Query: 227 EGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGAS----AAACEAP 282
             ++  + +E K  ++AV  +KP       A  +P+  ++ KAE + +S    ++  E  
Sbjct: 473 SDSSSSEEEEEKTSKSAVK-KKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEE 531

Query: 283 SAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPE 320
              G G+P  Q A  A   +A  A +  AA + E + E
Sbjct: 532 KLKGKGSPRPQ-APKANGTSALTAQNGKAAKNSEEEEE 568



 Score = 58.5 bits (140), Expect = 8e-09
 Identities = 71/326 (21%), Positives = 136/326 (41%), Gaps = 44/326 (13%)

Query: 22  AAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAAS 81
           A V     +ANG      K    +S +   S  +EE+Q     P A K         AA 
Sbjct: 61  AKVPERKLQANGPVAKKAKKKASSSDSEDSSEEEEEVQ----GPPAKK---------AAV 107

Query: 82  PSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPT--AAEGEAASAASSTSSPKAE 139
           P+      P  AAA  + +S  E+ +  + E  +   P     + +A +A +     K+ 
Sbjct: 108 PAKRVGLPPGKAAAKASESSSSEESSDDDDEEDQKKQPVQKGVKPQAKAAKAPPKKAKSS 167

Query: 140 DGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGG 199
           D  + S S + P K +K        K++  + K   K   +   A AP    GK  ++  
Sbjct: 168 DSDSDSSSEDEPPKNQKP-------KITPVTVKAQTKAPPKPARA-APKIANGKAASSSS 219

Query: 200 AAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAE 259
           ++++++ +  +  E+AAA  ++    ++  A        P +AA  P +  +S E  +++
Sbjct: 220 SSSSSSSSDDSEEEKAAATPKKTVPKKQVVA------KAPVKAATTPTRKSSSSEDSSSD 273

Query: 260 EPSKVEEKKAEEAGASAAACEAPSAAGP----GAPPEQEAAPAEEPAAAAASSACAAPS- 314
           E  + ++K  +      ++   PSA  P    G  P ++A   ++P  ++  S+  + S 
Sbjct: 274 EEEE-QKKPMKNKPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDSSDESDSS 332

Query: 315 --QEAQP-------ECSPEAPPAEAA 331
             +E +P       + + + PPA+ A
Sbjct: 333 SEEEKKPPTKAVVSKATTKPPPAKKA 358



 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 65/355 (18%), Positives = 132/355 (37%), Gaps = 40/355 (11%)

Query: 11  KGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKE 70
           + +AA   P +A  + S S ++ ++          +P   ++  K   +   +AP     
Sbjct: 153 QAKAAKAPPKKAKSSDSDSDSSSEDEPPKNQKPKITPVTVKAQTKAPPKPARAAPKIANG 212

Query: 71  EPAAAGSGAASPSAAEKGEPAAAAAP----------------EAGASPVEKEAPAEG--- 111
           + A++ S ++S S+++  E   AAA                 +A  +P  K + +E    
Sbjct: 213 KAASSSSSSSSSSSSDDSEEEKAAATPKKTVPKKQVVAKAPVKAATTPTRKSSSSEDSSS 272

Query: 112 -EAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFS 170
            E  E   P   +    S+    S+P  +      P  +  +K++   S + S   S  S
Sbjct: 273 DEEEEQKKPMKNKPGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDSSDESDSS 332

Query: 171 FKKNKK------------------EAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASG 212
            ++ KK                  +A E     + +     DEA    A     +     
Sbjct: 333 SEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSEDDEAPSKPAGTTKNSSNKPA 392

Query: 213 EQAAAPG-EEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEE 271
               +P  + AAA ++   GG     +  +++ + E+  +S+E K  +  +  + K   +
Sbjct: 393 VTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEESSSSEEEKTKKMVATTKPKATAK 452

Query: 272 AGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEAP 326
           A  S  A +AP  +   +  + +++ +EE     + SA     Q+     +P  P
Sbjct: 453 AALSLPAKQAPQGSRDSS-SDSDSSSSEEEEEKTSKSAVKKKPQKVAGGAAPSKP 506



 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 17/180 (9%)

Query: 11  KGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKE 70
           K   A  +P   A A+    A     G    + D+S  +  S ++EE +    +    K 
Sbjct: 439 KKMVATTKPKATAKAALSLPAKQAPQG----SRDSSSDSDSSSSEEEEEKTSKSAVKKKP 494

Query: 71  EPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAA 130
           +  A G+  + P++A+KG+  ++ +  +  S  E+E   +G+    GSP       A  A
Sbjct: 495 QKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEKLKGK----GSPR----PQAPKA 546

Query: 131 SSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAE 190
           + TS+  A++G     S E  ++KKK          SG   K+ + EA +  EAE P A+
Sbjct: 547 NGTSALTAQNGKAAKNSEEEEEEKKKAAVVVSK---SGSLKKRKQNEAAK--EAETPQAK 601



 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 58/302 (19%), Positives = 115/302 (38%), Gaps = 36/302 (11%)

Query: 19  PGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGS--APAADKEEPAAAG 76
           P + ++ + P K   ++   V+ + D+S  +  S  +E+     +  + A  K  PA   
Sbjct: 299 PPKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSEEEKKPPTKAVVSKATTKPPPAKKA 358

Query: 77  SGAASPSA-AEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSS 135
           + ++S S+ ++  E   A +  AG +      PA    +    P AA  +         +
Sbjct: 359 AESSSDSSDSDSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLT 418

Query: 136 PKAEDGATPSPSNETPKKKKKRF--------SFKKSFKLSGFSFKKNKKEAGEGGEAEAP 187
            KA+  ++   S+ + ++K K+         + K +  L      +  +++    ++ + 
Sbjct: 419 RKADSSSSEEESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSS 478

Query: 188 AAEGGK----------DEAAGGAAA---AAAEAGAASGEQAAAPGEEAAAGEEGAAG-GD 233
             E  K           + AGGAA    A+A+ G A    +++  + +   EE   G G 
Sbjct: 479 EEEEEKTSKSAVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEKLKGKGS 538

Query: 234 PQEAKPQE-----------AAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAP 282
           P+   P+             A    +    ++ KAA   SK    K  +   +A   E P
Sbjct: 539 PRPQAPKANGTSALTAQNGKAAKNSEEEEEEKKKAAVVVSKSGSLKKRKQNEAAKEAETP 598

Query: 283 SA 284
            A
Sbjct: 599 QA 600



 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 59/278 (21%), Positives = 110/278 (39%), Gaps = 17/278 (6%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPSKANG--QENGHVKVNGDASPAAAESGAKEELQANGS 63
           +K AA+  + +     +    +PSK  G  + + +       SPA   + A ++    G 
Sbjct: 355 AKKAAESSSDSSDSDSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQ 414

Query: 64  APAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPV----EKEAP--AEGEAAEPG 117
                K + +++   ++S    +  +  A   P+A A        K+AP  +   +++  
Sbjct: 415 KLLTRKADSSSSEEESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSD 474

Query: 118 SPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKE 177
           S ++ E E  ++ S+      +     +PS     KK K  S   S      S ++ +K 
Sbjct: 475 SSSSEEEEEKTSKSAVKKKPQKVAGGAAPSKPASAKKGKAESSNSSSS-DDSSEEEEEKL 533

Query: 178 AGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEA 237
            G+G    +P  +  K   A G +A  A+ G A+        E+  A    +  G  ++ 
Sbjct: 534 KGKG----SPRPQAPK---ANGTSALTAQNGKAAKNSEEEEEEKKKAAVVVSKSGSLKKR 586

Query: 238 KPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGAS 275
           K  EAA   E P A  + K     +  + KK E+  +S
Sbjct: 587 KQNEAAKEAETPQAK-KIKLQTPNTFPKRKKGEKRASS 623


>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
           [Homo sapiens]
          Length = 1412

 Score = 62.4 bits (150), Expect = 5e-10
 Identities = 88/346 (25%), Positives = 133/346 (38%), Gaps = 54/346 (15%)

Query: 8   TAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAA 67
           T+   E   E   E A A+ P  A+   +    V G   P++ +  AK E +  G     
Sbjct: 84  TSESSEEEEEAEAETAKAT-PRLASTNSS----VLGADLPSSMKEKAKAETEKAGKT-GN 137

Query: 68  DKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEA--PAEGEAAEPGSPTAAEGE 125
               PA   + A   S     + A  +A     S  E+E   PA G AA+PG  +A + +
Sbjct: 138 SMPHPATGKTVANLLSGKSPRKSAEPSANTTLVSETEEEGSVPAFGAAAKPGMVSAGQAD 197

Query: 126 AASAASSTSSPKAE------------------------DGATPSPSNETPKKKKKRFSFK 161
           ++S  +S+SS + +                         GATP+P    P K     S  
Sbjct: 198 SSSEDTSSSSDETDVEVKASEKILQVRAASAPAKGTPGKGATPAP----PGKAGAVASQT 253

Query: 162 KSFKLSGFSFKKNKKEAGEGGEAEAPAAEG-------GKDEAAGGAAAAAAEAGAASGEQ 214
           K+ K    S  ++  E     E E PAA+        GK    G A+A A E    S  +
Sbjct: 254 KAGKPEEDS--ESSSEESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKE----SPRK 307

Query: 215 AAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGA 274
            AAP   A  G+ G A    Q  K +E + +  +   S+E   A+  +K   K  +   A
Sbjct: 308 GAAP---APPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQ--AKPSGKAPQVRAA 362

Query: 275 SAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPE 320
           SA A E+P      APP +    A +           + S+E+  +
Sbjct: 363 SAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSD 408



 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 76/306 (24%), Positives = 117/306 (38%), Gaps = 49/306 (16%)

Query: 21  EAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEE-PAAAGSGA 79
           +A   SSP+K   Q+ G V V   A      S + EE     S+ +AD EE PAA  +  
Sbjct: 500 QAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEE-----SSDSADSEEAPAAMTAAQ 554

Query: 80  ASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAE 139
           A P         A   P+  A P +    A  + A     T A  +A +A S   S  A 
Sbjct: 555 AKP---------ALKIPQTKACPKKTNTTASAKVAPVRVGTQAPRKAGTATSPAGSSPAV 605

Query: 140 DGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGG 199
            G T  P+ ++                       + +E+    E    A   G+ ++ G 
Sbjct: 606 AGGTQRPAEDS----------------------SSSEESDSEEEKTGLAVTVGQAKSVG- 642

Query: 200 AAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAE 259
                 +  AAS     + G+  A    G  G    + K ++   +      SD  +AA 
Sbjct: 643 ---KGLQVKAASVPVKGSLGQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESDSEEAAA 699

Query: 260 EPSKVEEK-KAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQ 318
            P++V+   K  +A A+ AA  APSA G  + P        +   AAA +   +PS+   
Sbjct: 700 SPAQVKTSVKKTQAKANPAAARAPSAKGTISAP-------GKVVTAAAQAKQRSPSKVKP 752

Query: 319 PECSPE 324
           P  +P+
Sbjct: 753 PVRNPQ 758



 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 73/336 (21%), Positives = 121/336 (36%), Gaps = 20/336 (5%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAP 65
           S   A      + P +A  A+SP+ ++    G  +   + S ++ ES ++EE    G A 
Sbjct: 576 SAKVAPVRVGTQAPRKAGTATSPAGSSPAVAGGTQRPAEDSSSSEESDSEEE--KTGLAV 633

Query: 66  AADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGE 125
              + +    G    + S   KG      AP             + E  E    +  E +
Sbjct: 634 TVGQAKSVGKGLQVKAASVPVKGSLGQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESD 693

Query: 126 AASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAE 185
           +  AA+S +  K     T + +N    +     S K +    G    K    A +  +  
Sbjct: 694 SEEAAASPAQVKTSVKKTQAKANPAAARAP---SAKGTISAPG----KVVTAAAQAKQRS 746

Query: 186 APAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAA-- 243
               +            A   A   S  +A A   +A  G E  +G   +E+  +E A  
Sbjct: 747 PSKVKPPVRNPQNSTVLARGPASVPSVGKAVATAAQAQTGPEEDSGSSEEESDSEEEAET 806

Query: 244 VAPEKPPA-SDETKAAEEPSKVEEKKAE------EAGASAAACEAPSAAGPGAPPEQEAA 296
           +A  KP   + + +AA  P+K   +K        + G SAA  +A      G+  E+  +
Sbjct: 807 LAQVKPSGKTHQIRAALAPAKESPRKGAAPTPPGKTGPSAA--QAGKQDDSGSSSEESDS 864

Query: 297 PAEEPAAAAASSACAAPSQEAQPECSPEAPPAEAAE 332
             E PAA  ++     P     P  SP  P A  A+
Sbjct: 865 DGEAPAAVTSAQVIKPPLIFVDPNRSPAGPAATPAQ 900



 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 77/323 (23%), Positives = 120/323 (37%), Gaps = 35/323 (10%)

Query: 19  PGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSG 78
           PG+     +  KA  QE+         S  AA S A+ +     +   A+   PAAA + 
Sbjct: 667 PGKTGPTVTQVKAEKQEDSESSEEESDSEEAAASPAQVKTSVKKTQAKAN---PAAARAP 723

Query: 79  AASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGE------AAEPGSPTAAEGEAASAASS 132
           +A  + +  G+   AAA     SP + + P          A  P S  +     A+AA +
Sbjct: 724 SAKGTISAPGKVVTAAAQAKQRSPSKVKPPVRNPQNSTVLARGPASVPSVGKAVATAAQA 783

Query: 133 TSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGG 192
            + P+ + G     S+E     ++        K SG   K ++  A      E+P  +G 
Sbjct: 784 QTGPEEDSG-----SSEEESDSEEEAETLAQVKPSG---KTHQIRAALAPAKESP-RKGA 834

Query: 193 KDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPAS 252
                G    +AA+AG    +  ++  E  + GE  AA    Q  KP    V P + PA 
Sbjct: 835 APTPPGKTGPSAAQAG-KQDDSGSSSEESDSDGEAPAAVTSAQVIKPPLIFVDPNRSPAG 893

Query: 253 D-----ETKAAEEPSKVEEKKAEEAGASAAACE--------APSAAGPGAPPEQEAAPAE 299
                 + +AA  P K    +A E+ A +++ E        A     PG        P  
Sbjct: 894 PAATPAQAQAASTPRKA---RASESTARSSSSESEDEDVIPATQCLTPGIRTNVVTMPTA 950

Query: 300 EPAAAAASSACAAPSQEAQPECS 322
            P  A  +S   A S +     S
Sbjct: 951 HPRIAPKASMAGASSSKESSRIS 973



 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 75/335 (22%), Positives = 127/335 (37%), Gaps = 48/335 (14%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPSKA-----NGQENGHVKVNGDASPAAAESGAKEELQA 60
           +K + +  AA   PG+   A + ++A     + Q +     + + +PA A+   K     
Sbjct: 301 AKESPRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQVR 360

Query: 61  NGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPT 120
             SAPA  KE P       A+P+   K  PAAA   +      E+++ +  E ++     
Sbjct: 361 AASAPA--KESPRK----GAAPAPPRKTGPAAA---QVQVGKQEEDSRSSSEESDSDREA 411

Query: 121 AAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGE 180
            A   AA       SP+ +  +T                      +            G+
Sbjct: 412 LAAMNAAQVKPLGKSPQVKPAST--------------------MGMGPLGKGAGPVPPGK 451

Query: 181 GGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGE-------EGAAGGD 233
            G A   A  G  +E +  ++  ++++       A AP +E + G           A G 
Sbjct: 452 VGPATPSAQVGKWEEDSESSSEESSDSSDGEVPTAVAPAQEKSLGNILQAKPTSSPAKGP 511

Query: 234 PQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQ 293
           PQ+A P    V  EKP   D ++++EE S  +   +EEA A+  A +A  A      P+ 
Sbjct: 512 PQKAGPVAVQVKAEKP--MDNSESSEESS--DSADSEEAPAAMTAAQAKPAL---KIPQT 564

Query: 294 EAAPAEEPAAAAASSACAAPSQEAQPECSPEAPPA 328
           +A P +    A+A  A      +A  +      PA
Sbjct: 565 KACPKKTNTTASAKVAPVRVGTQAPRKAGTATSPA 599



 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 80/321 (24%), Positives = 122/321 (38%), Gaps = 21/321 (6%)

Query: 15  AAERPG--EAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEP 72
           AA +PG   A  A S S+     +    V   AS    +  A            A    P
Sbjct: 184 AAAKPGMVSAGQADSSSEDTSSSSDETDVEVKASEKILQVRAASAPAKGTPGKGATPAPP 243

Query: 73  AAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASS 132
             AG+  AS + A K E  + ++ E  +S  E+E PA     +  +        A++A +
Sbjct: 244 GKAGA-VASQTKAGKPEEDSESSSEE-SSDSEEETPAAKALLQAKASGKTSQVGAASAPA 301

Query: 133 TSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGG 192
             SP+   GA P+P  +T     K  + K+       S + + +E     EA A A   G
Sbjct: 302 KESPR--KGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEE-----EAPAQAKPSG 354

Query: 193 KDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPAS 252
           K      A+A A E    S  + AAP   A   + G A    Q  K +E + +  +   S
Sbjct: 355 KAPQVRAASAPAKE----SPRKGAAP---APPRKTGPAAAQVQVGKQEEDSRSSSEESDS 407

Query: 253 D-ETKAAEEPSKVEE-KKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAA-SSA 309
           D E  AA   ++V+   K+ +   ++     P   G G  P  +  PA   A        
Sbjct: 408 DREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWEED 467

Query: 310 CAAPSQEAQPECSPEAPPAEA 330
             + S+E+      E P A A
Sbjct: 468 SESSSEESSDSSDGEVPTAVA 488



 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 69/299 (23%), Positives = 107/299 (35%), Gaps = 38/299 (12%)

Query: 13   EAAAERPGEAAVASSPSKANGQEN-GHVKVNGDASPAAAESGAKEELQANGSA---PAAD 68
            E AAE   +  VA S S  +G    G    N  AS A  +  +   + +  +A   P   
Sbjct: 1109 ETAAESSEDDVVAPSQSLLSGYMTPGLTPANSQASKATPKLDSSPSVSSTLAAKDDPDGK 1168

Query: 69   KEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEA------------AEP 116
            +E      +G  SP    K E A+   P+    P +     +                +P
Sbjct: 1169 QEAKPQQAAGMLSPKTGGK-EAASGTTPQKSRKPKKGAGNPQASTLALQSNITQCLLGQP 1227

Query: 117  GSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKK----KKKRFSFKKSFKLSGFSFK 172
                 A+ +A+     T   + E       + E+ +K    +K++ S  +    +  S K
Sbjct: 1228 WPLNEAQVQASVVKVLTELLEQERKKVVDTTKESSRKGWESRKRKLSGDQPAARTPRSKK 1287

Query: 173  KNKKEAGEGGEAEAPA--------AEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAA 224
            K K  AGEGGEA             +  +D+A+G       +    S      P EE   
Sbjct: 1288 KKKLGAGEGGEASVSPEKTSTTSKGKAKRDKASGDVKEKKGKGSLGSQGAKDEPEEELQK 1347

Query: 225  GEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPS 283
            G     GGD    K ++     EK  +    K  E+    +EKK +   AS    E+PS
Sbjct: 1348 GMGTVEGGDQSNPKSKK-----EKKKSDKRKKDKEK----KEKKKKAKKASTKDSESPS 1397



 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 61/294 (20%), Positives = 103/294 (35%), Gaps = 17/294 (5%)

Query: 25   ASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSA 84
            A+SP   + Q  G  K+     P         E+Q    AP +  +   ++ S + S   
Sbjct: 1032 ATSPQSTSVQAKGTNKLRKPKLP---------EVQQATKAPESSDDSEDSSDSSSGSEED 1082

Query: 85   AEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATP 144
             E  + A +A    G +P   E   E  AAE     ++E +  + + S  S     G TP
Sbjct: 1083 GEGPQGAKSAHTLVGPTPSRTETLVEETAAE-----SSEDDVVAPSQSLLSGYMTPGLTP 1137

Query: 145  SPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAA 204
            + S  +    K   S   S  L+       K+EA     A   + + G  EAA G     
Sbjct: 1138 ANSQASKATPKLDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPKTGGKEAASGTTPQK 1197

Query: 205  AEAGAASGEQAAAPGEEAAAGEEGAAGGDP---QEAKPQEAAVAPEKPPASDETKAAEEP 261
            +           A      +       G P    EA+ Q + V         E K   + 
Sbjct: 1198 SRKPKKGAGNPQASTLALQSNITQCLLGQPWPLNEAQVQASVVKVLTELLEQERKKVVDT 1257

Query: 262  SKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQ 315
            +K   +K  E+     + + P+A  P +  +++    E   A+ +    +  S+
Sbjct: 1258 TKESSRKGWESRKRKLSGDQPAARTPRSKKKKKLGAGEGGEASVSPEKTSTTSK 1311



 Score = 33.1 bits (74), Expect = 0.35
 Identities = 42/161 (26%), Positives = 55/161 (34%), Gaps = 24/161 (14%)

Query: 29   SKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKG 88
            S   G E+   K++GD  PAA    +K+            K++  A   G AS S  +  
Sbjct: 1261 SSRKGWESRKRKLSGD-QPAARTPRSKK------------KKKLGAGEGGEASVSPEKTS 1307

Query: 89   EPAAAAAPEAGASPVEKEAPAEGEAAEPGSPT-----------AAEGEAASAASSTSSPK 137
              +   A    AS   KE   +G     G+               EG   S   S    K
Sbjct: 1308 TTSKGKAKRDKASGDVKEKKGKGSLGSQGAKDEPEEELQKGMGTVEGGDQSNPKSKKEKK 1367

Query: 138  AEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEA 178
              D        +  KKK K+ S K S   S    KK KK A
Sbjct: 1368 KSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTA 1408


>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b
           [Homo sapiens]
          Length = 1411

 Score = 62.4 bits (150), Expect = 5e-10
 Identities = 88/346 (25%), Positives = 133/346 (38%), Gaps = 54/346 (15%)

Query: 8   TAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAA 67
           T+   E   E   E A A+ P  A+   +    V G   P++ +  AK E +  G     
Sbjct: 84  TSESSEEEEEAEAETAKAT-PRLASTNSS----VLGADLPSSMKEKAKAETEKAGKT-GN 137

Query: 68  DKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEA--PAEGEAAEPGSPTAAEGE 125
               PA   + A   S     + A  +A     S  E+E   PA G AA+PG  +A + +
Sbjct: 138 SMPHPATGKTVANLLSGKSPRKSAEPSANTTLVSETEEEGSVPAFGAAAKPGMVSAGQAD 197

Query: 126 AASAASSTSSPKAE------------------------DGATPSPSNETPKKKKKRFSFK 161
           ++S  +S+SS + +                         GATP+P    P K     S  
Sbjct: 198 SSSEDTSSSSDETDVEVKASEKILQVRAASAPAKGTPGKGATPAP----PGKAGAVASQT 253

Query: 162 KSFKLSGFSFKKNKKEAGEGGEAEAPAAEG-------GKDEAAGGAAAAAAEAGAASGEQ 214
           K+ K    S  ++  E     E E PAA+        GK    G A+A A E    S  +
Sbjct: 254 KAGKPEEDS--ESSSEESSDSEEETPAAKALLQAKASGKTSQVGAASAPAKE----SPRK 307

Query: 215 AAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGA 274
            AAP   A  G+ G A    Q  K +E + +  +   S+E   A+  +K   K  +   A
Sbjct: 308 GAAP---APPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQ--AKPSGKAPQVRAA 362

Query: 275 SAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPE 320
           SA A E+P      APP +    A +           + S+E+  +
Sbjct: 363 SAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSRSSSEESDSD 408



 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 76/306 (24%), Positives = 117/306 (38%), Gaps = 49/306 (16%)

Query: 21  EAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEE-PAAAGSGA 79
           +A   SSP+K   Q+ G V V   A      S + EE     S+ +AD EE PAA  +  
Sbjct: 500 QAKPTSSPAKGPPQKAGPVAVQVKAEKPMDNSESSEE-----SSDSADSEEAPAAMTAAQ 554

Query: 80  ASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAE 139
           A P         A   P+  A P +    A  + A     T A  +A +A S   S  A 
Sbjct: 555 AKP---------ALKIPQTKACPKKTNTTASAKVAPVRVGTQAPRKAGTATSPAGSSPAV 605

Query: 140 DGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGG 199
            G T  P+ ++                       + +E+    E    A   G+ ++ G 
Sbjct: 606 AGGTQRPAEDS----------------------SSSEESDSEEEKTGLAVTVGQAKSVG- 642

Query: 200 AAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAE 259
                 +  AAS     + G+  A    G  G    + K ++   +      SD  +AA 
Sbjct: 643 ---KGLQVKAASVPVKGSLGQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESDSEEAAA 699

Query: 260 EPSKVEEK-KAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQ 318
            P++V+   K  +A A+ AA  APSA G  + P        +   AAA +   +PS+   
Sbjct: 700 SPAQVKTSVKKTQAKANPAAARAPSAKGTISAP-------GKVVTAAAQAKQRSPSKVKP 752

Query: 319 PECSPE 324
           P  +P+
Sbjct: 753 PVRNPQ 758



 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 73/336 (21%), Positives = 121/336 (36%), Gaps = 20/336 (5%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAP 65
           S   A      + P +A  A+SP+ ++    G  +   + S ++ ES ++EE    G A 
Sbjct: 576 SAKVAPVRVGTQAPRKAGTATSPAGSSPAVAGGTQRPAEDSSSSEESDSEEE--KTGLAV 633

Query: 66  AADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGE 125
              + +    G    + S   KG      AP             + E  E    +  E +
Sbjct: 634 TVGQAKSVGKGLQVKAASVPVKGSLGQGTAPVLPGKTGPTVTQVKAEKQEDSESSEEESD 693

Query: 126 AASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAE 185
           +  AA+S +  K     T + +N    +     S K +    G    K    A +  +  
Sbjct: 694 SEEAAASPAQVKTSVKKTQAKANPAAARAP---SAKGTISAPG----KVVTAAAQAKQRS 746

Query: 186 APAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAA-- 243
               +            A   A   S  +A A   +A  G E  +G   +E+  +E A  
Sbjct: 747 PSKVKPPVRNPQNSTVLARGPASVPSVGKAVATAAQAQTGPEEDSGSSEEESDSEEEAET 806

Query: 244 VAPEKPPA-SDETKAAEEPSKVEEKKAE------EAGASAAACEAPSAAGPGAPPEQEAA 296
           +A  KP   + + +AA  P+K   +K        + G SAA  +A      G+  E+  +
Sbjct: 807 LAQVKPSGKTHQIRAALAPAKESPRKGAAPTPPGKTGPSAA--QAGKQDDSGSSSEESDS 864

Query: 297 PAEEPAAAAASSACAAPSQEAQPECSPEAPPAEAAE 332
             E PAA  ++     P     P  SP  P A  A+
Sbjct: 865 DGEAPAAVTSAQVIKPPLIFVDPNRSPAGPAATPAQ 900



 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 77/323 (23%), Positives = 120/323 (37%), Gaps = 35/323 (10%)

Query: 19  PGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSG 78
           PG+     +  KA  QE+         S  AA S A+ +     +   A+   PAAA + 
Sbjct: 667 PGKTGPTVTQVKAEKQEDSESSEEESDSEEAAASPAQVKTSVKKTQAKAN---PAAARAP 723

Query: 79  AASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGE------AAEPGSPTAAEGEAASAASS 132
           +A  + +  G+   AAA     SP + + P          A  P S  +     A+AA +
Sbjct: 724 SAKGTISAPGKVVTAAAQAKQRSPSKVKPPVRNPQNSTVLARGPASVPSVGKAVATAAQA 783

Query: 133 TSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGG 192
            + P+ + G     S+E     ++        K SG   K ++  A      E+P  +G 
Sbjct: 784 QTGPEEDSG-----SSEEESDSEEEAETLAQVKPSG---KTHQIRAALAPAKESPR-KGA 834

Query: 193 KDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPAS 252
                G    +AA+AG    +  ++  E  + GE  AA    Q  KP    V P + PA 
Sbjct: 835 APTPPGKTGPSAAQAGKQD-DSGSSSEESDSDGEAPAAVTSAQVIKPPLIFVDPNRSPAG 893

Query: 253 D-----ETKAAEEPSKVEEKKAEEAGASAAACE--------APSAAGPGAPPEQEAAPAE 299
                 + +AA  P K    +A E+ A +++ E        A     PG        P  
Sbjct: 894 PAATPAQAQAASTPRKA---RASESTARSSSSESEDEDVIPATQCLTPGIRTNVVTMPTA 950

Query: 300 EPAAAAASSACAAPSQEAQPECS 322
            P  A  +S   A S +     S
Sbjct: 951 HPRIAPKASMAGASSSKESSRIS 973



 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 75/335 (22%), Positives = 127/335 (37%), Gaps = 48/335 (14%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPSKA-----NGQENGHVKVNGDASPAAAESGAKEELQA 60
           +K + +  AA   PG+   A + ++A     + Q +     + + +PA A+   K     
Sbjct: 301 AKESPRKGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEEEAPAQAKPSGKAPQVR 360

Query: 61  NGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPT 120
             SAPA  KE P       A+P+   K  PAAA   +      E+++ +  E ++     
Sbjct: 361 AASAPA--KESPRK----GAAPAPPRKTGPAAA---QVQVGKQEEDSRSSSEESDSDREA 411

Query: 121 AAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGE 180
            A   AA       SP+ +  +T                      +            G+
Sbjct: 412 LAAMNAAQVKPLGKSPQVKPAST--------------------MGMGPLGKGAGPVPPGK 451

Query: 181 GGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGE-------EGAAGGD 233
            G A   A  G  +E +  ++  ++++       A AP +E + G           A G 
Sbjct: 452 VGPATPSAQVGKWEEDSESSSEESSDSSDGEVPTAVAPAQEKSLGNILQAKPTSSPAKGP 511

Query: 234 PQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQ 293
           PQ+A P    V  EKP   D ++++EE S  +   +EEA A+  A +A  A      P+ 
Sbjct: 512 PQKAGPVAVQVKAEKP--MDNSESSEESS--DSADSEEAPAAMTAAQAKPAL---KIPQT 564

Query: 294 EAAPAEEPAAAAASSACAAPSQEAQPECSPEAPPA 328
           +A P +    A+A  A      +A  +      PA
Sbjct: 565 KACPKKTNTTASAKVAPVRVGTQAPRKAGTATSPA 599



 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 80/321 (24%), Positives = 122/321 (38%), Gaps = 21/321 (6%)

Query: 15  AAERPG--EAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEP 72
           AA +PG   A  A S S+     +    V   AS    +  A            A    P
Sbjct: 184 AAAKPGMVSAGQADSSSEDTSSSSDETDVEVKASEKILQVRAASAPAKGTPGKGATPAPP 243

Query: 73  AAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASS 132
             AG+  AS + A K E  + ++ E  +S  E+E PA     +  +        A++A +
Sbjct: 244 GKAGA-VASQTKAGKPEEDSESSSEE-SSDSEEETPAAKALLQAKASGKTSQVGAASAPA 301

Query: 133 TSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGG 192
             SP+   GA P+P  +T     K  + K+       S + + +E     EA A A   G
Sbjct: 302 KESPR--KGAAPAPPGKTGPAVAKAQAGKREEDSQSSSEESDSEE-----EAPAQAKPSG 354

Query: 193 KDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPAS 252
           K      A+A A E    S  + AAP   A   + G A    Q  K +E + +  +   S
Sbjct: 355 KAPQVRAASAPAKE----SPRKGAAP---APPRKTGPAAAQVQVGKQEEDSRSSSEESDS 407

Query: 253 D-ETKAAEEPSKVEE-KKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAA-SSA 309
           D E  AA   ++V+   K+ +   ++     P   G G  P  +  PA   A        
Sbjct: 408 DREALAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWEED 467

Query: 310 CAAPSQEAQPECSPEAPPAEA 330
             + S+E+      E P A A
Sbjct: 468 SESSSEESSDSSDGEVPTAVA 488



 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 69/299 (23%), Positives = 107/299 (35%), Gaps = 38/299 (12%)

Query: 13   EAAAERPGEAAVASSPSKANGQEN-GHVKVNGDASPAAAESGAKEELQANGSA---PAAD 68
            E AAE   +  VA S S  +G    G    N  AS A  +  +   + +  +A   P   
Sbjct: 1108 ETAAESSEDDVVAPSQSLLSGYMTPGLTPANSQASKATPKLDSSPSVSSTLAAKDDPDGK 1167

Query: 69   KEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEA------------AEP 116
            +E      +G  SP    K E A+   P+    P +     +                +P
Sbjct: 1168 QEAKPQQAAGMLSPKTGGK-EAASGTTPQKSRKPKKGAGNPQASTLALQSNITQCLLGQP 1226

Query: 117  GSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKK----KKKRFSFKKSFKLSGFSFK 172
                 A+ +A+     T   + E       + E+ +K    +K++ S  +    +  S K
Sbjct: 1227 WPLNEAQVQASVVKVLTELLEQERKKVVDTTKESSRKGWESRKRKLSGDQPAARTPRSKK 1286

Query: 173  KNKKEAGEGGEAEAPA--------AEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAA 224
            K K  AGEGGEA             +  +D+A+G       +    S      P EE   
Sbjct: 1287 KKKLGAGEGGEASVSPEKTSTTSKGKAKRDKASGDVKEKKGKGSLGSQGAKDEPEEELQK 1346

Query: 225  GEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPS 283
            G     GGD    K ++     EK  +    K  E+    +EKK +   AS    E+PS
Sbjct: 1347 GMGTVEGGDQSNPKSKK-----EKKKSDKRKKDKEK----KEKKKKAKKASTKDSESPS 1396



 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 62/294 (21%), Positives = 103/294 (35%), Gaps = 18/294 (6%)

Query: 25   ASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSA 84
            A+SP   + Q  G  K+     P         E+Q    AP +  +   ++ S + S   
Sbjct: 1032 ATSPQSTSVQAKGTNKLRKPKLP---------EVQQATKAPESSDDSEDSSDSSSGSEED 1082

Query: 85   AEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATP 144
             E G   A +A   G +P   E   E  AAE     ++E +  + + S  S     G TP
Sbjct: 1083 GE-GPQGAKSAHTLGPTPSRTETLVEETAAE-----SSEDDVVAPSQSLLSGYMTPGLTP 1136

Query: 145  SPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAA 204
            + S  +    K   S   S  L+       K+EA     A   + + G  EAA G     
Sbjct: 1137 ANSQASKATPKLDSSPSVSSTLAAKDDPDGKQEAKPQQAAGMLSPKTGGKEAASGTTPQK 1196

Query: 205  AEAGAASGEQAAAPGEEAAAGEEGAAGGDP---QEAKPQEAAVAPEKPPASDETKAAEEP 261
            +           A      +       G P    EA+ Q + V         E K   + 
Sbjct: 1197 SRKPKKGAGNPQASTLALQSNITQCLLGQPWPLNEAQVQASVVKVLTELLEQERKKVVDT 1256

Query: 262  SKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQ 315
            +K   +K  E+     + + P+A  P +  +++    E   A+ +    +  S+
Sbjct: 1257 TKESSRKGWESRKRKLSGDQPAARTPRSKKKKKLGAGEGGEASVSPEKTSTTSK 1310



 Score = 33.1 bits (74), Expect = 0.35
 Identities = 42/161 (26%), Positives = 55/161 (34%), Gaps = 24/161 (14%)

Query: 29   SKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKG 88
            S   G E+   K++GD  PAA    +K+            K++  A   G AS S  +  
Sbjct: 1260 SSRKGWESRKRKLSGD-QPAARTPRSKK------------KKKLGAGEGGEASVSPEKTS 1306

Query: 89   EPAAAAAPEAGASPVEKEAPAEGEAAEPGSPT-----------AAEGEAASAASSTSSPK 137
              +   A    AS   KE   +G     G+               EG   S   S    K
Sbjct: 1307 TTSKGKAKRDKASGDVKEKKGKGSLGSQGAKDEPEEELQKGMGTVEGGDQSNPKSKKEKK 1366

Query: 138  AEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEA 178
              D        +  KKK K+ S K S   S    KK KK A
Sbjct: 1367 KSDKRKKDKEKKEKKKKAKKASTKDSESPSQKKKKKKKKTA 1407


>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
           sapiens]
          Length = 2462

 Score = 61.6 bits (148), Expect = 9e-10
 Identities = 70/259 (27%), Positives = 95/259 (36%), Gaps = 36/259 (13%)

Query: 86  EKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPS 145
           +K +  AAA+ EA   PV      E E  E    +  E E    A +T +  ++  + PS
Sbjct: 682 KKKKAPAAASEEAAFPPV-----VEDEEMEASGVSGNEEEMVEEAEATVNNSSDTESIPS 736

Query: 146 PSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAA 205
           P  E  K              +G +  K     G  G    P     +D  A      A+
Sbjct: 737 PHTEAAKD-------------TGQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPAS 783

Query: 206 EAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAP-------EKPPASDE---- 254
           EA  A     A P   A           P+E K +E A AP       +KPPA++E    
Sbjct: 784 EATGAPTPPPAPPSPSAPPPVV------PKEEKEEETAAAPPVEEGEEQKPPAAEELAVD 837

Query: 255 TKAAEEPSKVE-EKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAP 313
           T  AEEP K E  ++AEE  A     EA  A   GA   ++       A  A SS     
Sbjct: 838 TGKAEEPVKSECTEEAEEGPAKGKDAEAAEATAEGALKAEKKEGGSGRATTAKSSGAPQD 897

Query: 314 SQEAQPECSPEAPPAEAAE 332
           S  +    + E   AE  +
Sbjct: 898 SDSSATCSADEVDEAEGGD 916



 Score = 55.5 bits (132), Expect = 7e-08
 Identities = 86/352 (24%), Positives = 124/352 (35%), Gaps = 72/352 (20%)

Query: 11   KGEAAAERPGEAAVASSPSKANGQENGH------VKVNGDASPAAAESGAKEELQANGSA 64
            + EA      +     SP     ++ G         +  D  P    +   E++      
Sbjct: 720  EAEATVNNSSDTESIPSPHTEAAKDTGQNGPKPPATLGADGPPPGPPTPPPEDI------ 773

Query: 65   PAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEG 124
            PA  +  PA+  +GA +P       P A  +P A    V KE   E  AA   +P   EG
Sbjct: 774  PAPTEPTPASEATGAPTP-------PPAPPSPSAPPPVVPKEEKEEETAA---APPVEEG 823

Query: 125  EAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEG--- 181
            E          P AE+ A  +   E P K +     ++         K    EA E    
Sbjct: 824  E------EQKPPAAEELAVDTGKAEEPVKSECTEEAEEG------PAKGKDAEAAEATAE 871

Query: 182  GEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEG----------AAG 231
            G  +A   EGG   A    ++ A +   +S   +A   +EA  G++              
Sbjct: 872  GALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDEAEGGDKNRLLSPRPSLLTPT 931

Query: 232  GDPQEAKPQEAAVAPEKPPASDETK---AAEEP---SKVEEKKAEEAGASAAACEAPSAA 285
            GDP+      A  +P+KP    + K   AA  P   +KV E   E+A        AP+  
Sbjct: 932  GDPR------ANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDA--------APTKP 977

Query: 286  GPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEAP-----PAEAAE 332
             P APP  +    E  A     S+    S+   P    EA      PA AAE
Sbjct: 978  APPAPPPPQNLQPESDAPQQPGSSPRGKSRSPAPPADKEAEKPVFFPAFAAE 1029



 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 71/309 (22%), Positives = 110/309 (35%), Gaps = 38/309 (12%)

Query: 46  SPAAAESGAK-------EELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEA 98
           +PAAA   A        EE++A+G +   ++    A  +   S        P   AA + 
Sbjct: 686 APAAASEEAAFPPVVEDEEMEASGVSGNEEEMVEEAEATVNNSSDTESIPSPHTEAAKDT 745

Query: 99  GASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRF 158
           G +  +  A    +   PG PT    +  +    T + +A    TP P+  +P       
Sbjct: 746 GQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPAPPSPSAPPPVV 805

Query: 159 SFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAE------GGKDEAAGGAAAAAAEAGAASG 212
             ++  + +  +         EG E + PAAE      G  +E         AE G A G
Sbjct: 806 PKEEKEEETAAA-----PPVEEGEEQKPPAAEELAVDTGKAEEPVKSECTEEAEEGPAKG 860

Query: 213 EQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEK-PPASDETKAAEEPSKVEEKKAEE 271
           + A    E A A  EGA   + +E     A  A     P   ++ A     +V+E  AE 
Sbjct: 861 KDA----EAAEATAEGALKAEKKEGGSGRATTAKSSGAPQDSDSSATCSADEVDE--AEG 914

Query: 272 AGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAA------------PSQEAQP 319
              +      PS   P   P   A+P +           AA            P ++A P
Sbjct: 915 GDKNRLLSPRPSLLTPTGDPRANASPQKPLDLKQLKQRAAAIPPIQVTKVHEPPREDAAP 974

Query: 320 -ECSPEAPP 327
            + +P APP
Sbjct: 975 TKPAPPAPP 983


>gi|194248057 growth associated protein 43 isoform 1 [Homo sapiens]
          Length = 274

 Score = 61.6 bits (148), Expect = 9e-10
 Identities = 57/200 (28%), Positives = 84/200 (42%), Gaps = 26/200 (13%)

Query: 139 EDGATPSPSNETPKKKKKRFSFKKSFK--LSGFSFKKNKKEAGEGGEAEAPAAEGGKDEA 196
           +DG  P       K  K     + SF+  ++    K  KK+  +  EAEA      KDEA
Sbjct: 58  QDGIKPED-----KAHKAATKIQASFRGHITRKKLKGEKKDDVQAAEAEA----NKKDEA 108

Query: 197 AGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPE----KPPAS 252
               A    + G  +    AAP   +   E G AG  P E K  E   A E    + PAS
Sbjct: 109 P--VADGVEKKGEGTTTAEAAPATGSKPDEPGKAGETPSEEKKGEGDAATEQAAPQAPAS 166

Query: 253 DETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAA 312
            E KA    +        E+   A+   +PS+    AP ++E   A+ PAA  A++A   
Sbjct: 167 SEEKAGSAET--------ESATKASTDNSPSSKAEDAPAKEEPKQADVPAAVTAAAATTP 218

Query: 313 PSQEAQPECSPEAPPAEAAE 332
            +++A  + + + PP E  E
Sbjct: 219 AAEDAAAKATAQ-PPTETGE 237



 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 64/222 (28%), Positives = 87/222 (39%), Gaps = 61/222 (27%)

Query: 44  DASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAA---AAPEAGA 100
           D +P A     K E      A  A   +P   G    +PS  +KGE  AA   AAP+A A
Sbjct: 106 DEAPVADGVEKKGEGTTTAEAAPATGSKPDEPGKAGETPSEEKKGEGDAATEQAAPQAPA 165

Query: 101 SPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSP--KAEDGATPSPSNETPKKKKKRF 158
           S  EK               +AE E+A+ AS+ +SP  KAED    +P+ E PK      
Sbjct: 166 SSEEKAG-------------SAETESATKASTDNSPSSKAED----APAKEEPK------ 202

Query: 159 SFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAP 218
                                   +A+ PAA      AA     AA +A A +  Q    
Sbjct: 203 ------------------------QADVPAAV----TAAAATTPAAEDAAAKATAQPPTE 234

Query: 219 GEEAAAGEEGAAGGDPQEAKPQEAA---VAPEKPPASDETKA 257
             E++  EE     D  E KP+E+A      E+ P +D+  A
Sbjct: 235 TGESSQAEENIEAVD--ETKPKESARQDEGKEEEPEADQEHA 274



 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 55/210 (26%), Positives = 81/210 (38%), Gaps = 25/210 (11%)

Query: 137 KAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEA----------GEGGE-AE 185
           KA   AT   ++      +K+   +K   +     + NKK+           GEG   AE
Sbjct: 66  KAHKAATKIQASFRGHITRKKLKGEKKDDVQAAEAEANKKDEAPVADGVEKKGEGTTTAE 125

Query: 186 APAAEGGKDEAAGGAAAAAAEAGAASGEQA---AAPGEEAAAGEEGAAGGDPQEAKPQEA 242
           A  A G K +  G A    +E     G+ A   AAP +  A+ EE A   + + A     
Sbjct: 126 AAPATGSKPDEPGKAGETPSEEKKGEGDAATEQAAP-QAPASSEEKAGSAETESATKAST 184

Query: 243 AVAP----EKPPASDETKAAEEPSKVEEKKAEEAGASAAACEA----PSAAGPGAPPEQE 294
             +P    E  PA +E K A+ P+ V    A    A  AA +A    P+  G  +  E+ 
Sbjct: 185 DNSPSSKAEDAPAKEEPKQADVPAAVTAAAATTPAAEDAAAKATAQPPTETGESSQAEEN 244

Query: 295 AAPAEEPAAAAASSACAAPSQEAQPECSPE 324
               +E       SA     +E +PE   E
Sbjct: 245 IEAVDE--TKPKESARQDEGKEEEPEADQE 272



 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 66/253 (26%), Positives = 89/253 (35%), Gaps = 41/253 (16%)

Query: 51  ESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAE 110
           + G K E +A+    AA K + +  G         EK +   AA  EA     + EAP  
Sbjct: 58  QDGIKPEDKAH---KAATKIQASFRGHITRKKLKGEKKDDVQAAEAEANK---KDEAPVA 111

Query: 111 GEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFS 170
               + G  T      A AA +T S   E    P  + ETP ++KK              
Sbjct: 112 DGVEKKGEGTTT----AEAAPATGSKPDE----PGKAGETPSEEKKG------------- 150

Query: 171 FKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAA 230
                 E     E  AP A    +E AG A   +A   A++    ++  E+A A EE   
Sbjct: 151 ------EGDAATEQAAPQAPASSEEKAGSAETESATK-ASTDNSPSSKAEDAPAKEEPKQ 203

Query: 231 GGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAP 290
              P  A    AA  P    A+ +  A       E  +AEE        EA     P   
Sbjct: 204 ADVPA-AVTAAAATTPAAEDAAAKATAQPPTETGESSQAEE------NIEAVDETKPKES 256

Query: 291 PEQEAAPAEEPAA 303
             Q+    EEP A
Sbjct: 257 ARQDEGKEEEPEA 269



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 17/134 (12%)

Query: 11  KGEA---AAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAA 67
           KGE    A   P   +    P KA    +   K  GDA+            QA   APA+
Sbjct: 117 KGEGTTTAEAAPATGSKPDEPGKAGETPSEEKKGEGDAATE----------QAAPQAPAS 166

Query: 68  DKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAA 127
            +E+  +A + +A+ ++ +    + A    A   P + + PA   AA   +P A +    
Sbjct: 167 SEEKAGSAETESATKASTDNSPSSKAEDAPAKEEPKQADVPAAVTAAAATTPAAED---- 222

Query: 128 SAASSTSSPKAEDG 141
           +AA +T+ P  E G
Sbjct: 223 AAAKATAQPPTETG 236



 Score = 37.7 bits (86), Expect = 0.014
 Identities = 42/139 (30%), Positives = 54/139 (38%), Gaps = 25/139 (17%)

Query: 11  KGEAAAERPGEAAVASSPSKANGQEN-GHVKVNGDASPAAAESGAKEELQANGSAPAADK 69
           +G+AA E+    A ASS  KA   E     K + D SP++              APA  K
Sbjct: 151 EGDAATEQAAPQAPASSEEKAGSAETESATKASTDNSPSSKAE----------DAPA--K 198

Query: 70  EEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEG--EAA 127
           EEP  A   AA  +AA     A  AA +A A P            E G  + AE   EA 
Sbjct: 199 EEPKQADVPAAVTAAAATTPAAEDAAAKATAQP----------PTETGESSQAEENIEAV 248

Query: 128 SAASSTSSPKAEDGATPSP 146
                  S + ++G    P
Sbjct: 249 DETKPKESARQDEGKEEEP 267


>gi|4503911 growth associated protein 43 isoform 2 [Homo sapiens]
          Length = 238

 Score = 61.6 bits (148), Expect = 9e-10
 Identities = 57/200 (28%), Positives = 84/200 (42%), Gaps = 26/200 (13%)

Query: 139 EDGATPSPSNETPKKKKKRFSFKKSFK--LSGFSFKKNKKEAGEGGEAEAPAAEGGKDEA 196
           +DG  P       K  K     + SF+  ++    K  KK+  +  EAEA      KDEA
Sbjct: 22  QDGIKPED-----KAHKAATKIQASFRGHITRKKLKGEKKDDVQAAEAEA----NKKDEA 72

Query: 197 AGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPE----KPPAS 252
               A    + G  +    AAP   +   E G AG  P E K  E   A E    + PAS
Sbjct: 73  P--VADGVEKKGEGTTTAEAAPATGSKPDEPGKAGETPSEEKKGEGDAATEQAAPQAPAS 130

Query: 253 DETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAA 312
            E KA    +        E+   A+   +PS+    AP ++E   A+ PAA  A++A   
Sbjct: 131 SEEKAGSAET--------ESATKASTDNSPSSKAEDAPAKEEPKQADVPAAVTAAAATTP 182

Query: 313 PSQEAQPECSPEAPPAEAAE 332
            +++A  + + + PP E  E
Sbjct: 183 AAEDAAAKATAQ-PPTETGE 201



 Score = 52.4 bits (124), Expect = 6e-07
 Identities = 64/222 (28%), Positives = 87/222 (39%), Gaps = 61/222 (27%)

Query: 44  DASPAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAA---AAPEAGA 100
           D +P A     K E      A  A   +P   G    +PS  +KGE  AA   AAP+A A
Sbjct: 70  DEAPVADGVEKKGEGTTTAEAAPATGSKPDEPGKAGETPSEEKKGEGDAATEQAAPQAPA 129

Query: 101 SPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSP--KAEDGATPSPSNETPKKKKKRF 158
           S  EK               +AE E+A+ AS+ +SP  KAED    +P+ E PK      
Sbjct: 130 SSEEKAG-------------SAETESATKASTDNSPSSKAED----APAKEEPK------ 166

Query: 159 SFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAP 218
                                   +A+ PAA      AA     AA +A A +  Q    
Sbjct: 167 ------------------------QADVPAAV----TAAAATTPAAEDAAAKATAQPPTE 198

Query: 219 GEEAAAGEEGAAGGDPQEAKPQEAA---VAPEKPPASDETKA 257
             E++  EE     D  E KP+E+A      E+ P +D+  A
Sbjct: 199 TGESSQAEENIEAVD--ETKPKESARQDEGKEEEPEADQEHA 238



 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 55/210 (26%), Positives = 81/210 (38%), Gaps = 25/210 (11%)

Query: 137 KAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEA----------GEGGE-AE 185
           KA   AT   ++      +K+   +K   +     + NKK+           GEG   AE
Sbjct: 30  KAHKAATKIQASFRGHITRKKLKGEKKDDVQAAEAEANKKDEAPVADGVEKKGEGTTTAE 89

Query: 186 APAAEGGKDEAAGGAAAAAAEAGAASGEQA---AAPGEEAAAGEEGAAGGDPQEAKPQEA 242
           A  A G K +  G A    +E     G+ A   AAP +  A+ EE A   + + A     
Sbjct: 90  AAPATGSKPDEPGKAGETPSEEKKGEGDAATEQAAP-QAPASSEEKAGSAETESATKAST 148

Query: 243 AVAP----EKPPASDETKAAEEPSKVEEKKAEEAGASAAACEA----PSAAGPGAPPEQE 294
             +P    E  PA +E K A+ P+ V    A    A  AA +A    P+  G  +  E+ 
Sbjct: 149 DNSPSSKAEDAPAKEEPKQADVPAAVTAAAATTPAAEDAAAKATAQPPTETGESSQAEEN 208

Query: 295 AAPAEEPAAAAASSACAAPSQEAQPECSPE 324
               +E       SA     +E +PE   E
Sbjct: 209 IEAVDE--TKPKESARQDEGKEEEPEADQE 236



 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 66/253 (26%), Positives = 89/253 (35%), Gaps = 41/253 (16%)

Query: 51  ESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAE 110
           + G K E +A+    AA K + +  G         EK +   AA  EA     + EAP  
Sbjct: 22  QDGIKPEDKAH---KAATKIQASFRGHITRKKLKGEKKDDVQAAEAEANK---KDEAPVA 75

Query: 111 GEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFS 170
               + G  T      A AA +T S   E    P  + ETP ++KK              
Sbjct: 76  DGVEKKGEGTTT----AEAAPATGSKPDE----PGKAGETPSEEKKG------------- 114

Query: 171 FKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAA 230
                 E     E  AP A    +E AG A   +A   A++    ++  E+A A EE   
Sbjct: 115 ------EGDAATEQAAPQAPASSEEKAGSAETESATK-ASTDNSPSSKAEDAPAKEEPKQ 167

Query: 231 GGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAP 290
              P  A    AA  P    A+ +  A       E  +AEE        EA     P   
Sbjct: 168 ADVPA-AVTAAAATTPAAEDAAAKATAQPPTETGESSQAEE------NIEAVDETKPKES 220

Query: 291 PEQEAAPAEEPAA 303
             Q+    EEP A
Sbjct: 221 ARQDEGKEEEPEA 233



 Score = 41.6 bits (96), Expect = 0.001
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 17/134 (12%)

Query: 11  KGEA---AAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAA 67
           KGE    A   P   +    P KA    +   K  GDA+            QA   APA+
Sbjct: 81  KGEGTTTAEAAPATGSKPDEPGKAGETPSEEKKGEGDAATE----------QAAPQAPAS 130

Query: 68  DKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAA 127
            +E+  +A + +A+ ++ +    + A    A   P + + PA   AA   +P A +    
Sbjct: 131 SEEKAGSAETESATKASTDNSPSSKAEDAPAKEEPKQADVPAAVTAAAATTPAAED---- 186

Query: 128 SAASSTSSPKAEDG 141
           +AA +T+ P  E G
Sbjct: 187 AAAKATAQPPTETG 200



 Score = 37.7 bits (86), Expect = 0.014
 Identities = 42/139 (30%), Positives = 54/139 (38%), Gaps = 25/139 (17%)

Query: 11  KGEAAAERPGEAAVASSPSKANGQEN-GHVKVNGDASPAAAESGAKEELQANGSAPAADK 69
           +G+AA E+    A ASS  KA   E     K + D SP++              APA  K
Sbjct: 115 EGDAATEQAAPQAPASSEEKAGSAETESATKASTDNSPSSKAE----------DAPA--K 162

Query: 70  EEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEG--EAA 127
           EEP  A   AA  +AA     A  AA +A A P            E G  + AE   EA 
Sbjct: 163 EEPKQADVPAAVTAAAATTPAAEDAAAKATAQP----------PTETGESSQAEENIEAV 212

Query: 128 SAASSTSSPKAEDGATPSP 146
                  S + ++G    P
Sbjct: 213 DETKPKESARQDEGKEEEP 231


>gi|13376611 zinc finger protein 703 [Homo sapiens]
          Length = 590

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 89/352 (25%), Positives = 128/352 (36%), Gaps = 78/352 (22%)

Query: 19  PGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKE--EPAAAG 76
           P  + + S  + ANG   G  K  G ++P AA + A   L+  G +PA DK   +P + G
Sbjct: 105 PPSSKLNSVAAAANGL--GAEKDPGRSAPGAASAAA--ALKQLGDSPAEDKSSFKPYSKG 160

Query: 77  SGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSP 136
           SG             ++ +  + +SP +K       AA P  P    G   SA+SS+SSP
Sbjct: 161 SGGGDSRKDSGSSSVSSTSSSSSSSPGDKAGFRVPSAACP--PFPPHGAPVSASSSSSSP 218

Query: 137 KAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKE-----------AGEGGEAE 185
               G +P  S+            K    + G    K  +E            G GGE  
Sbjct: 219 GGSRGGSPHHSD-----------CKNGGGVGGGELDKKDQEPKPSPEPAAVSRGGGGE-- 265

Query: 186 APAAEGGKDEAAGGAAAAAAEAGAASGEQAAA----PGEE------AAAGEE----GAAG 231
            P A GG +  A G  +    A   +G  A      PG        ++ G      GA  
Sbjct: 266 -PGAHGGAESGASGRKSEPPSALVGAGHVAPVSPYKPGHSVFPLPPSSIGYHGSIVGAYA 324

Query: 232 GDPQEAKP---------------QEAAVAPEKPPASDETKAAEEPSKVE----------- 265
           G P +  P                   + P KPP+S     A  PS ++           
Sbjct: 325 GYPSQFVPGLDPSKSGLVGGQLSGGLGLPPGKPPSSSPLTGASPPSFLQGLCRDPYCLGG 384

Query: 266 -EKKAEEAGASAAACEAPSAAGP----GAPPEQEAAPAEEPAAAAASSACAA 312
               +   G+S + C A   AGP    G  P        +PAA ++S+A AA
Sbjct: 385 YHGASHLGGSSCSTCSAHDPAGPSLKAGGYPLVYPGHPLQPAALSSSAAQAA 436



 Score = 37.0 bits (84), Expect = 0.024
 Identities = 58/249 (23%), Positives = 84/249 (33%), Gaps = 34/249 (13%)

Query: 56  EELQANGSAPAADKEEPAAAGSGAA-SPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAA 114
           E LQ   S P +  E  A     A  + + ++ G+P     P +  + V   A   G   
Sbjct: 67  EYLQPLSSTPVSPIELDAKKSPLALLAQTCSQIGKPDPP--PSSKLNSVAAAANGLGAEK 124

Query: 115 EPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKN 174
           +PG        AA+A        AED                + SFK   K SG    + 
Sbjct: 125 DPGRSAPGAASAAAALKQLGDSPAED----------------KSSFKPYSKGSGGGDSRK 168

Query: 175 KKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDP 234
              +       + ++    D+A     +AA       G   +A    ++ G  G+ GG P
Sbjct: 169 DSGSSSVSSTSSSSSSSPGDKAGFRVPSAACPPFPPHGAPVSASSSSSSPG--GSRGGSP 226

Query: 235 Q--EAKPQEAAVAPEKPPASDETKAAEEPSKVEE--------KKAEEAGASAAACEAPSA 284
              + K        E      E K + EP+ V              E+GAS    E PSA
Sbjct: 227 HHSDCKNGGGVGGGELDKKDQEPKPSPEPAAVSRGGGGEPGAHGGAESGASGRKSEPPSA 286

Query: 285 ---AGPGAP 290
              AG  AP
Sbjct: 287 LVGAGHVAP 295



 Score = 35.0 bits (79), Expect = 0.093
 Identities = 72/321 (22%), Positives = 99/321 (30%), Gaps = 25/321 (7%)

Query: 25  ASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKE----EPAAAGSGAA 80
           +SSP  + G    H            E   K++       PAA       EP A G GA 
Sbjct: 215 SSSPGGSRGGSPHHSDCKNGGGVGGGELDKKDQEPKPSPEPAAVSRGGGGEPGAHG-GAE 273

Query: 81  SPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAED 140
           S ++  K EP +A       +PV    P       P S     G    A +   S +   
Sbjct: 274 SGASGRKSEPPSALVGAGHVAPVSPYKPGHSVFPLPPSSIGYHGSIVGAYAGYPS-QFVP 332

Query: 141 GATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAA--G 198
           G  PS S     +             S          +   G    P   GG   A+  G
Sbjct: 333 GLDPSKSGLVGGQLSGGLGLPPGKPPSSSPLTGASPPSFLQGLCRDPYCLGGYHGASHLG 392

Query: 199 GAAAAAAEAGAASGEQAAAPG----------EEAAAGEEGAAGGDPQEAKPQEAAVAPEK 248
           G++ +   A   +G    A G          + AA     A    P         +   +
Sbjct: 393 GSSCSTCSAHDPAGPSLKAGGYPLVYPGHPLQPAALSSSAAQAALPGHPLYTYGFMLQNE 452

Query: 249 P-PASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAAS 307
           P P S    AA  P       +EE  +          A PGA     A P      +AA+
Sbjct: 453 PLPHSCNWVAASGPCDKRFATSEELLSHLRT----HTALPGAEKLLAAYPGASGLGSAAA 508

Query: 308 SACAAPS--QEAQPECSPEAP 326
           +A AA S      P  +P +P
Sbjct: 509 AAAAAASCHLHLPPPAAPGSP 529


>gi|239754474 PREDICTED: similar to mucin [Homo sapiens]
          Length = 417

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 71/297 (23%), Positives = 118/297 (39%), Gaps = 29/297 (9%)

Query: 47  PAAAESGAKEELQANGSAPAAD------KEEPAAAGSGAASPSAAEKGEPAAAA-APEAG 99
           P    +G   + + +GS+P+AD      +EE AAA   A    A ++ E AAAA  P + 
Sbjct: 39  PQCQPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAPVPTSS 98

Query: 100 ASPVEKEAPAEGEAAEPGSPTAAEGEAASAASS---TSSPKAEDGATPSPSNETPKKKKK 156
               EK    + +    G      G  +S ++        + E  A P P++   + +K+
Sbjct: 99  GHRTEKRKRLQLQCQPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPVPTSRGHRTEKR 158

Query: 157 RFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQ-- 214
           +    +     G      ++ +G    A+   A+  ++EAA  AA A    G  + ++  
Sbjct: 159 KRQQPQRRPAGGTG---QRRGSGSSPSADQQGAQDREEEAA--AAPAPTSRGHRTEKRKP 213

Query: 215 -----AAAPGEEAAAGEEGAAGGDPQEA--KPQEAAVAPEKPPASDETKAAEEPSKVEEK 267
                  A G     G   +   D Q A  + +EAA AP  P +        +P + + +
Sbjct: 214 QQPQCRPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAP-APTSRGHRTEKRKPQQPQRR 272

Query: 268 KAEEAGASAAACEAPSAAGPGAPP-EQEAAPAEEPAAAAASSACAAPSQEAQPECSP 323
            A   G    +  +PSA   GA   E+EAA A  P    +S       +  Q +C P
Sbjct: 273 PAGGTGQRRGSGYSPSADQQGAQDREEEAAAAPAP---TSSGHRTEKRKRLQLQCQP 326



 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 74/334 (22%), Positives = 128/334 (38%), Gaps = 32/334 (9%)

Query: 9   AAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAAD 68
           AA  + A +R  EAA A  P+ +  +     ++     PA    G   + + + S+P+AD
Sbjct: 76  AADQQRAQDREEEAAAAPVPTSSGHRTEKRKRLQLQCQPA----GGTGQRRGSRSSPSAD 131

Query: 69  K-------EEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTA 121
           +       EE AAA    +     EK +        AG +   + + +   A + G+   
Sbjct: 132 QQRAQDREEEAAAAPVPTSRGHRTEKRKRQQPQRRPAGGTGQRRGSGSSPSADQQGAQDR 191

Query: 122 AEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEG 181
            E EAA+A + TS     +   P      P     +    +S   +     ++++E  E 
Sbjct: 192 EE-EAAAAPAPTSRGHRTEKRKPQQPQCRPAGGTGQRRGSRSSPSADQQRAQDREE--EA 248

Query: 182 GEAEAPAAEGGKDEA----------AGGAAAAAAEAGAASGEQAAAPG--EEAAAGEEGA 229
             A AP + G + E           AGG         + S +Q  A    EEAAA     
Sbjct: 249 AAAPAPTSRGHRTEKRKPQQPQRRPAGGTGQRRGSGYSPSADQQGAQDREEEAAAAPAPT 308

Query: 230 AGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGA 289
           + G   E K +   +  +    + + + +   S   ++ A++    AAA   P+++G   
Sbjct: 309 SSGHRTE-KRKRLQLQCQPAGGTGQRRGSGCSSSANQQGAQDREEEAAAAPVPTSSGHRT 367

Query: 290 PPEQEAAPAEEPAAA-----AASSACAAPSQEAQ 318
              +   P   PAA       + S+ +A  Q AQ
Sbjct: 368 EKRKPQQPQRRPAAGTGQRRGSGSSPSADQQRAQ 401



 Score = 45.8 bits (107), Expect = 5e-05
 Identities = 58/277 (20%), Positives = 104/277 (37%), Gaps = 58/277 (20%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPSKANGQENGH-VKVNGDASPAAAESGAKEELQANGSA 64
           S  +A  + A +R  EAA A +P+       GH  +      P    +G   + + + S+
Sbjct: 179 SSPSADQQGAQDREEEAAAAPAPT-----SRGHRTEKRKPQQPQCRPAGGTGQRRGSRSS 233

Query: 65  PAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEG 124
           P+AD++            +   + E AAA AP +     EK  P + +    G      G
Sbjct: 234 PSADQQR-----------AQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAGGTGQRRG 282

Query: 125 EAASAAS---STSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEG 181
              S ++        + E  A P+P++                  SG   +K K+     
Sbjct: 283 SGYSPSADQQGAQDREEEAAAAPAPTS------------------SGHRTEKRKRL---- 320

Query: 182 GEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQE 241
            + +   A G       G +++A + GA   E+     E AAA    ++G   ++ KPQ+
Sbjct: 321 -QLQCQPAGGTGQRRGSGCSSSANQQGAQDREE-----EAAAAPVPTSSGHRTEKRKPQQ 374

Query: 242 AAVAPE----------KPPASDETKAAEEPSKVEEKK 268
               P             P++D+ +A +   +V + K
Sbjct: 375 PQRRPAAGTGQRRGSGSSPSADQQRAQDREEEVRKWK 411



 Score = 38.1 bits (87), Expect = 0.011
 Identities = 34/134 (25%), Positives = 51/134 (38%), Gaps = 7/134 (5%)

Query: 195 EAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDE 254
           + AGG         + S +Q  A   E  A    AA     + + +EAA AP  P +S  
Sbjct: 42  QPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPAADQQRAQDREEEAAAAP-VPTSSGH 100

Query: 255 TKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPS 314
                +  +++ + A   G    +  +PSA       +Q A   EE AAAA         
Sbjct: 101 RTEKRKRLQLQCQPAGGTGQRRGSRSSPSA------DQQRAQDREEEAAAAPVPTSRGHR 154

Query: 315 QEAQPECSPEAPPA 328
            E +    P+  PA
Sbjct: 155 TEKRKRQQPQRRPA 168



 Score = 37.7 bits (86), Expect = 0.014
 Identities = 34/155 (21%), Positives = 61/155 (39%), Gaps = 12/155 (7%)

Query: 182 GEAEAPAAE--GGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKP 239
           G   +P+A+  G +D     AAA AA+   A   +     EEAAA     + G   E K 
Sbjct: 52  GSGSSPSADQQGAQDREEEAAAAPAADQQRAQDRE-----EEAAAAPVPTSSGHRTE-KR 105

Query: 240 QEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAE 299
           +   +  +    + + + +      ++++A++    AAA   P++ G      +   P  
Sbjct: 106 KRLQLQCQPAGGTGQRRGSRSSPSADQQRAQDREEEAAAAPVPTSRGHRTEKRKRQQPQR 165

Query: 300 EPAAAA----ASSACAAPSQEAQPECSPEAPPAEA 330
            PA        S +  +  Q+   +   EA  A A
Sbjct: 166 RPAGGTGQRRGSGSSPSADQQGAQDREEEAAAAPA 200



 Score = 35.8 bits (81), Expect = 0.055
 Identities = 49/190 (25%), Positives = 71/190 (37%), Gaps = 47/190 (24%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPS-------KANGQENGHVKVNGDA-------SPAAAE 51
           S  +A  + A +R  EAA A +P+       K   Q+       G         SP+A +
Sbjct: 232 SSPSADQQRAQDREEEAAAAPAPTSRGHRTEKRKPQQPQRRPAGGTGQRRGSGYSPSADQ 291

Query: 52  SGAKEELQANGSAPAADKE--------------EPAAA-----GSGAASPSAAEKG---- 88
            GA++  +   +APA                  +PA       GSG +S SA ++G    
Sbjct: 292 QGAQDREEEAAAAPAPTSSGHRTEKRKRLQLQCQPAGGTGQRRGSGCSS-SANQQGAQDR 350

Query: 89  --EPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSP 146
             E AAA  P +     EK  P + +      P A  G+      S SSP A+       
Sbjct: 351 EEEAAAAPVPTSSGHRTEKRKPQQPQR----RPAAGTGQ---RRGSGSSPSADQQRAQDR 403

Query: 147 SNETPKKKKK 156
             E  K KK+
Sbjct: 404 EEEVRKWKKR 413


>gi|154146231 DMRT-like family A2 [Homo sapiens]
          Length = 542

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 75/287 (26%), Positives = 107/287 (37%), Gaps = 51/287 (17%)

Query: 62  GSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTA 121
           GS  AAD       G GA +P A   G  A A   EA     +       +A  PGSP  
Sbjct: 158 GSVCAAD-----GGGPGAGAP-AGTGGGAAGAGGSEAKLQKFDLFPKTLLQAGRPGSPLP 211

Query: 122 AEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFK-LSGFSFKKNKKEAGE 180
              +          P + DGA   P   +P+ +    S     +  SG    +  KEAG 
Sbjct: 212 PPVK----------PLSPDGADSGPGTSSPEVRPGSGSENGDGESFSGSPLARASKEAGG 261

Query: 181 GGEAEAPAAEGGKDEAAGGAAAAAAEAGAAS----GEQAAAPGEEAAAGEEGAAGGDPQE 236
                A    GG++++ G A+   +E+G+ +    GE A APG    +G        P++
Sbjct: 262 SCPGSAGPGGGGEEDSPGSASPLGSESGSEADKEEGEAAPAPGLGGGSG--------PRQ 313

Query: 237 AKPQE--AAVAPEKPPASDETK----AAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAP 290
             P +    V P       E        +    +E+      G  AA        GP AP
Sbjct: 314 RTPLDILTRVFPGHRRGVLELVLQGCGGDVVQAIEQVLNHHRGGLAAGL------GPAAP 367

Query: 291 PEQEAA----------PAEEPAAAAASSACAAPSQEAQPECSPEAPP 327
           P++ A           P+   AAAAA++A   P   A  +  P APP
Sbjct: 368 PDKAAVGAAAAADDAWPSRVDAAAAAAAAAGGPGLPAPLQAGPAAPP 414



 Score = 33.9 bits (76), Expect = 0.21
 Identities = 27/89 (30%), Positives = 36/89 (40%)

Query: 60  ANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSP 119
           A G  PAA  ++ A   + AA  +   + + AAAAA  AG   +     A   A     P
Sbjct: 359 AAGLGPAAPPDKAAVGAAAAADDAWPSRVDAAAAAAAAAGGPGLPAPLQAGPAAPPHHRP 418

Query: 120 TAAEGEAASAASSTSSPKAEDGATPSPSN 148
             A   A  A  S SS  A     P+ S+
Sbjct: 419 LLAGAMAPGALGSLSSRSAFSPLQPNASH 447



 Score = 31.2 bits (69), Expect = 1.3
 Identities = 36/147 (24%), Positives = 52/147 (35%), Gaps = 35/147 (23%)

Query: 18  RPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKE------- 70
           R  + A  S P  A     G     G ASP  +ESG++ + +   +APA           
Sbjct: 254 RASKEAGGSCPGSAGPGGGGEEDSPGSASPLGSESGSEADKEEGEAAPAPGLGGGSGPRQ 313

Query: 71  -------------------EPAAAGSGAASPSAAE------KGEPAAAAAPEAGASPVEK 105
                              E    G G     A E      +G  AA   P   A+P +K
Sbjct: 314 RTPLDILTRVFPGHRRGVLELVLQGCGGDVVQAIEQVLNHHRGGLAAGLGP---AAPPDK 370

Query: 106 EAPAEGEAAEPGSPTAAEGEAASAASS 132
            A     AA+   P+  +  AA+AA++
Sbjct: 371 AAVGAAAAADDAWPSRVDAAAAAAAAA 397



 Score = 30.4 bits (67), Expect = 2.3
 Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)

Query: 42  NGDASPAAAESGAKEELQANGSAPAA-------DKEEPAAAGS-GAASPSAAEKGEPAAA 93
           NGD    +    A+   +A GS P +       +++ P +A   G+ S S A+K E  AA
Sbjct: 241 NGDGESFSGSPLARASKEAGGSCPGSAGPGGGGEEDSPGSASPLGSESGSEADKEEGEAA 300

Query: 94  AAPEAG 99
            AP  G
Sbjct: 301 PAPGLG 306



 Score = 29.6 bits (65), Expect = 3.9
 Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 4/93 (4%)

Query: 54  AKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEA 113
           A  +  A G+A AAD   P+   + AA+ +AA  G P   A  +AG +      P    A
Sbjct: 366 APPDKAAVGAAAAADDAWPSRVDAAAAAAAAA--GGPGLPAPLQAGPAAPPHHRPLLAGA 423

Query: 114 AEPGSPTAAEGEAASA--ASSTSSPKAEDGATP 144
             PG+  +    +A +    + S   A+ GA P
Sbjct: 424 MAPGALGSLSSRSAFSPLQPNASHFGADAGAYP 456


>gi|116256464 hypothetical protein LOC343990 [Homo sapiens]
          Length = 962

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 76/347 (21%), Positives = 118/347 (34%), Gaps = 53/347 (15%)

Query: 4   QFSKTAAKGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGS 63
           Q S    +  + A+    + +  +P +   +E   ++V+ +  P++ +     +      
Sbjct: 235 QRSSKMRRLSSRAQSESLSDLTCTPEEEENEEKPLLEVSPEERPSSGQQDVAPDRGPEPG 294

Query: 64  APAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAE 123
            PA     P     GA +  A  +   A  A+ E G        P E  ++ P +P  AE
Sbjct: 295 PPA-----PLPPPGGARARRARLQHSSALTASVEEGG------VPGEDPSSRPATPELAE 343

Query: 124 GEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGE 183
            E+A           E    P P                          K   EA   G 
Sbjct: 344 PESAPTLRVEPPSPPEGPPNPGPDGG-----------------------KQDGEAPPAGP 380

Query: 184 AEAPAAEGGKD------EAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEA 237
             APA +  ++      + A     A  E      E   A   EA +  +G     P+EA
Sbjct: 381 C-APATDKAEEVVCAPEDVASPFPTAIPEGDTTPPETDPAATSEAPSARDGPERSVPKEA 439

Query: 238 KPQEAAV-----APEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGP-GAPP 291
           +P    +      P  P    E +A  EP +    + E  G   +   APS   P     
Sbjct: 440 EPTPPVLPDEEKGPPGPAPEPEREAETEPERGAGTEPERIGTEPSTAPAPSPPAPKSCLK 499

Query: 292 EQEAAPAEEPAAAAASSACAAPSQEAQP------ECSPEAPPAEAAE 332
            + AA +E PAA+   +A  +P  E  P        +PE P AE AE
Sbjct: 500 HRPAAASEGPAASPPLAAAESPPVEPGPGSLDAEAAAPERPKAERAE 546



 Score = 51.2 bits (121), Expect = 1e-06
 Identities = 78/292 (26%), Positives = 96/292 (32%), Gaps = 52/292 (17%)

Query: 25  ASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGS---GAAS 81
           A + S   G   G    +  A+P  AE  +   L+    +P      P   G    G A 
Sbjct: 317 ALTASVEEGGVPGEDPSSRPATPELAEPESAPTLRVEPPSPPEGPPNPGPDGGKQDGEAP 376

Query: 82  PS-----AAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSP 136
           P+     A +K E    A PE  ASP     P EG+   P +  AA  EA         P
Sbjct: 377 PAGPCAPATDKAEEVVCA-PEDVASPFPTAIP-EGDTTPPETDPAATSEA---------P 425

Query: 137 KAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEA 196
            A DG    P    PK+ +                    +E G  G A  P  E   +  
Sbjct: 426 SARDG----PERSVPKEAEPTPPVLPD------------EEKGPPGPAPEPEREAETEPE 469

Query: 197 AGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETK 256
            G    A  E      E + AP     A         P+       A A E P AS    
Sbjct: 470 RG----AGTEPERIGTEPSTAPAPSPPA---------PKSCLKHRPAAASEGPAASPPLA 516

Query: 257 AAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPP--EQEAAPAEEPAAAAA 306
           AAE P    E       A AAA E P A    APP   + AAP  +     A
Sbjct: 517 AAESPP--VEPGPGSLDAEAAAPERPKAERAEAPPAGAERAAPERKAERGGA 566



 Score = 36.6 bits (83), Expect = 0.032
 Identities = 77/344 (22%), Positives = 107/344 (31%), Gaps = 80/344 (23%)

Query: 6   SKTAAKGEAAAERPGEAAVASSPSKANG----QENGHVKVNGDASPAAAESGAKEELQAN 61
           S   A+      RP E A    P   +G     E     + G   P  A+ G ++  +  
Sbjct: 577 SSCRARPRPGVSRPLERASGRLPLARSGPVWRSEAALDDLQGLPEPQHAKPGPRKLAERG 636

Query: 62  GSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTA 121
                     P  +G  AASP+   K    AAAAP         + PA  E   P     
Sbjct: 637 ----------PQDSGDRAASPAGPRKSPQEAAAAPGTREPCPAAQEPAPSEDRNP----- 681

Query: 122 AEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEG 181
                    S++ S K  DGA+         K  KR+S +   + S     K +K     
Sbjct: 682 ---FPVKLRSTSLSLKYRDGASQE------VKGVKRYSAEVRLERSLTVLPKEEK----C 728

Query: 182 GEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKP-Q 240
               APA  G               A +  G+  A P E  ++         P   KP  
Sbjct: 729 PLGTAPALRG-------------TRAPSDQGKGKARPPEPLSS-------KPPLPRKPLL 768

Query: 241 EAAVAPEKPPASDETKAAEEPSK---VEEKKAEEAGASAAACEAPSAAGPGA-------- 289
           ++   P +P   D      EP K     EK+    GA  +    P+A GPGA        
Sbjct: 769 QSFTLPHQPAPPDAGPGEREPRKEPRTAEKRPLRRGAEKSL--PPAATGPGADGQPAPPW 826

Query: 290 --------------PPEQEAAPAEEPAAAAASSACAAPSQEAQP 319
                         PP QE  P      +        P +  +P
Sbjct: 827 ITVTRQKRRGTLDQPPNQEDKPGARTLKSEPGKQAKVPERGQEP 870


>gi|157738619 smoothelin-like 1 [Homo sapiens]
          Length = 512

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 57/248 (22%), Positives = 87/248 (35%), Gaps = 23/248 (9%)

Query: 90  PAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNE 149
           P A    +  A   EK    EG+ +E G+  +   +    +   +  +   G      NE
Sbjct: 3   PGAVGESDCSAEAREKMEQKEGKLSEDGTTVSPAADNPEMSGGGAPAEETKGTAGKAINE 62

Query: 150 TPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEA-------AGGAAA 202
            P  +               S K+ K  A +G  AE      G DE        AGG   
Sbjct: 63  GPPTE---------------SGKQEKAPAEDGMSAELQGEANGLDEVKVESQREAGGKED 107

Query: 203 AAAEAGAASGE-QAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDETKAAEEP 261
           A AE     GE +    G +   G +     +P+EA+ +E+ +A EK  A ++    E  
Sbjct: 108 AEAELKKEDGEKEETTVGSQEMTGRKEETKSEPKEAEEKESTLASEKQKAEEKEAKPESG 167

Query: 262 SKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPEC 321
            K +    ++    A   E  +         Q    + EP   A      A SQ+A  E 
Sbjct: 168 QKADANDRDKPEPKATVEEEDAKTASQEETGQRKECSTEPKEKATDEEAKAESQKAVVED 227

Query: 322 SPEAPPAE 329
             +A P E
Sbjct: 228 EAKAEPKE 235



 Score = 57.0 bits (136), Expect = 2e-08
 Identities = 76/319 (23%), Positives = 117/319 (36%), Gaps = 29/319 (9%)

Query: 12  GEAAAERPGEA--AVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADK 69
           G  A E  G A  A+   P   +G++      +G ++    E+   +E++      A  K
Sbjct: 46  GAPAEETKGTAGKAINEGPPTESGKQEKAPAEDGMSAELQGEANGLDEVKVESQREAGGK 105

Query: 70  EEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASA 129
           E+  A           EK E    +    G     K  P E E  E    +  +      
Sbjct: 106 EDAEAE----LKKEDGEKEETTVGSQEMTGRKEETKSEPKEAEEKESTLASEKQKAEEKE 161

Query: 130 ASSTSSPKAE--DGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAP 187
           A   S  KA+  D   P P     ++  K  S +++ +    S +  +K   E  +AE+ 
Sbjct: 162 AKPESGQKADANDRDKPEPKATVEEEDAKTASQEETGQRKECSTEPKEKATDEEAKAESQ 221

Query: 188 AAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPE 247
            A   +DEA         +  A  G +  A  +E A   E A  G P E + Q+     E
Sbjct: 222 KAVV-EDEAKAEPKEPDGKEEAKHGAKEEADAKEEAEDAEEAEPGSPSEEQEQDV----E 276

Query: 248 KPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAAS 307
           K P   E  A   PS  EE      G      E  + +  G  P+  A+    P+A+ +S
Sbjct: 277 KEP---EGGAGVIPSSPEEWPESPTG------EGHNLSTDGLGPDCVASGQTSPSASESS 327

Query: 308 SACAAPSQEAQPECSPEAP 326
                PS    P+  PE+P
Sbjct: 328 -----PSDV--PQSPPESP 339



 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 75/292 (25%), Positives = 112/292 (38%), Gaps = 32/292 (10%)

Query: 44  DASPAAAESGAKEE--LQANGS--APAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAG 99
           D S  A E   ++E  L  +G+  +PAAD  E     SG  +P+   KG     A     
Sbjct: 10  DCSAEAREKMEQKEGKLSEDGTTVSPAADNPEM----SGGGAPAEETKG----TAGKAIN 61

Query: 100 ASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKK-KKRF 158
             P  +    E   AE G     +GEA          + E G       E  K+  +K  
Sbjct: 62  EGPPTESGKQEKAPAEDGMSAELQGEANGLDEVKVESQREAGGKEDAEAELKKEDGEKEE 121

Query: 159 SFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAA- 217
           +   S +++G   ++ K E  E  E E+  A   +        A   EA   SG++A A 
Sbjct: 122 TTVGSQEMTGRK-EETKSEPKEAEEKESTLASEKQK-------AEEKEAKPESGQKADAN 173

Query: 218 ----PGEEAAAGEEGAAGGDPQEA-KPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEA 272
               P  +A   EE A     +E  + +E +  P++    +E KA  + + VE++   E 
Sbjct: 174 DRDKPEPKATVEEEDAKTASQEETGQRKECSTEPKEKATDEEAKAESQKAVVEDEAKAEP 233

Query: 273 GASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPECSPE 324
                  EA   A   A  ++EA  AEE     A     +  QE   E  PE
Sbjct: 234 KEPDGKEEAKHGAKEEADAKEEAEDAEE-----AEPGSPSEEQEQDVEKEPE 280



 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 51/252 (20%), Positives = 81/252 (32%), Gaps = 43/252 (17%)

Query: 11  KGEAAAERPGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKE 70
           K E    +P     A +  +   +    V+     + +  E+G ++E        A D+E
Sbjct: 156 KAEEKEAKPESGQKADANDRDKPEPKATVEEEDAKTASQEETGQRKECSTEPKEKATDEE 215

Query: 71  EPAAAGSGAASPSA-AEKGEPAAAAAPEAGASPVE--KEAPAEGEAAEPGSPTAAEGEAA 127
             A +        A AE  EP      + GA      KE   + E AEPGSP+  + +  
Sbjct: 216 AKAESQKAVVEDEAKAEPKEPDGKEEAKHGAKEEADAKEEAEDAEEAEPGSPSEEQEQDV 275

Query: 128 SAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAP 187
                   P+   G  PS   E P                                 E+P
Sbjct: 276 E-----KEPEGGAGVIPSSPEEWP---------------------------------ESP 297

Query: 188 AAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPE 247
             EG      G      A    +     ++P +   +  E  + G+ +E  P+    AP 
Sbjct: 298 TGEGHNLSTDGLGPDCVASGQTSPSASESSPSDVPQSPPESPSSGEKKEKAPERRVSAPA 357

Query: 248 KP--PASDETKA 257
           +P  P +   KA
Sbjct: 358 RPRGPRAQNRKA 369


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 76/320 (23%), Positives = 109/320 (34%), Gaps = 45/320 (14%)

Query: 45   ASPAAAESGA---KEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGAS 101
            A+P   E  A   K +L      P + K+ PA +       + + KG+P   A       
Sbjct: 1417 ATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAV----TP 1472

Query: 102  PVEKEAPAEGEAAEPGSPTAAEGEAASAASST------SSPKAEDGATPSPSNET----- 150
            P  KE PA  + A   SP  A    A   + T      SSPK E  ATPS   +      
Sbjct: 1473 PSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPK-EVPATPSSRRDPIAPTA 1531

Query: 151  ---PKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEA 207
                KK     + K++      +    KK        EAPA    K+ ++  A   +   
Sbjct: 1532 TLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYK 1591

Query: 208  GAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAV--APEKPPASDETKAAEEPSKVE 265
            GA S ++   P               P+EA    A    +PEK PA+   K       V 
Sbjct: 1592 GAPSPKELLIP--------PAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVT 1643

Query: 266  EKKAEEAGASAAACEA-------------PSAAGPGAPPEQEAAPAEEPAAAAASSACAA 312
                +++  S A+                P+  GP A  E   APA E      +     
Sbjct: 1644 PSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAPAPESTPIITAPTRKG 1703

Query: 313  PSQEAQPECSPEAPPAEAAE 332
            P  +     SP   P  +A+
Sbjct: 1704 PQTKKSSATSPPICPDPSAK 1723



 Score = 52.0 bits (123), Expect = 7e-07
 Identities = 71/290 (24%), Positives = 95/290 (32%), Gaps = 35/290 (12%)

Query: 65   PAADKEEPAAAG--SGAASPSAAE----KGEPAAAAAPE------AGASPVEKEAPAEGE 112
            P + K  PAA     GA++P AA     KG PAA   P+      A   P  K  PA   
Sbjct: 1016 PPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPS 1075

Query: 113  AAEPGSPTAAEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFK 172
                 +P AA   +     +T SPK      P P   TP   K   +        G    
Sbjct: 1076 LKGAPTPPAATPPSPKGGPATPSPKG----APMPPAATPPSPKGGLATPPH---KGAPTT 1128

Query: 173  KNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAA---AGEEGA 229
                     G    P  +G     A  A   + + G A+     AP   AA   + + G 
Sbjct: 1129 PAATPPSPKGGLATPPPKGAPTTPA--ATPPSPKGGLATPPPKGAPTTPAATPPSPKGGL 1186

Query: 230  AGGDPQEAKPQEAAVAPE--------KPPASDETKAAEEPSK---VEEKKAEEAGASAAA 278
            A   P+ A    AA  P          P  +  T AA  PS    +     + A  + AA
Sbjct: 1187 ATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAA 1246

Query: 279  CEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEAPPA 328
                   GP  PP + A         +     A P  +  P  +   PP+
Sbjct: 1247 TPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPS 1296



 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 79/342 (23%), Positives = 103/342 (30%), Gaps = 39/342 (11%)

Query: 9    AAKGEAAAERPGEAAV---ASSPSKANGQENGHVKVNGDASPAAAESGAK--EELQANGS 63
            A KG  A+  P  A     A+ PS   G      K      PAA     K      +   
Sbjct: 926  APKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKW-APTPPAATPPSPKGGPATPSPKG 984

Query: 64   APAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAE 123
            AP      P +   G A+PS      P A   P    SP     P         +P + +
Sbjct: 985  APTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPK 1044

Query: 124  GEAASAASSTSSPKAEDGATPSPSN--ETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEG 181
            G  A+      +P       PSP     TP              L G             
Sbjct: 1045 GSPAATPLPKGAPTTPAATLPSPKGGPATP-------------SLKGAPTPPAATPPSPK 1091

Query: 182  GEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAA--GEEGAAGGDPQEAKP 239
            G    P+ +G     A  A   + + G A+     AP   AA     +G     P +  P
Sbjct: 1092 GGPATPSPKGAPMPPA--ATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAP 1149

Query: 240  QEAAVAPEK---------PPASDETKAAEEPSKVE--EKKAEEAGASAAACEAPSAAGPG 288
               A  P           P  +  T AA  PS        + +   +  A   PS  G  
Sbjct: 1150 TTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGL 1209

Query: 289  APPEQEAAPAEEPAAAAAS--SACAAPSQEAQPECSPEAPPA 328
            A P  + AP   PAA   S     A PS +  P      PP+
Sbjct: 1210 ATPSPKGAPT-TPAATPPSPKGGLATPSPKGAPTTPAATPPS 1250



 Score = 50.1 bits (118), Expect = 3e-06
 Identities = 77/301 (25%), Positives = 106/301 (35%), Gaps = 49/301 (16%)

Query: 47   PAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAG-ASPVEK 105
            P+     A   L+   + PAA    P   G    SP  A     A   +P+ G A+P  K
Sbjct: 1065 PSPKGGPATPSLKGAPTPPAATPPSPKG-GPATPSPKGAPMPPAATPPSPKGGLATPPHK 1123

Query: 106  EAPAEGEAAEPGSPTAA------EGEAASAASSTSSPKA------EDGATPSPSNETPKK 153
             AP    AA P SP         +G   + A++  SPK         GA  +P+   P  
Sbjct: 1124 GAPTT-PAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSP 1182

Query: 154  KKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGE 213
            K             G     + K A     A  P+ +GG         A  +  GA +  
Sbjct: 1183 K-------------GGLATPSPKGAPTTPAATPPSPKGG--------LATPSPKGAPTTP 1221

Query: 214  QAAAPGEEAAAGEEGAAGGDPQEAKPQEAAV--APEKPPASDETKAAEEPSKVEEKKAEE 271
             A  P  +      G A   P+ A    AA   +P+  PA+   K A  P        + 
Sbjct: 1222 AATPPSPKG-----GLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKG 1276

Query: 272  AGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAP-SQEAQPECSPEAPPAEA 330
              A+     AP+ A    PP  +  PA  P   A +   A P S    P+ SP  PP + 
Sbjct: 1277 GLATPPHKGAPNPAVV-TPPSPKGGPATSPPKGAPTPPAATPPS----PKGSPGTPPPKG 1331

Query: 331  A 331
            A
Sbjct: 1332 A 1332



 Score = 48.9 bits (115), Expect = 6e-06
 Identities = 75/320 (23%), Positives = 105/320 (32%), Gaps = 38/320 (11%)

Query: 19   PGEAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSG 78
            P + A +SSP KA         +     PA   S  KE       A  + + +P A  + 
Sbjct: 1481 PKQVATSSSPKKAPATP---APMGAPTLPAVIPSSPKEV-----PATPSSRRDPIAPTAT 1532

Query: 79   AASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASSTSSPKA 138
              S        P  A  P A   P  K+ PA         PT  E  A  ++   SSP A
Sbjct: 1533 LLSKKTPATLAPKEALIPPAMTVPSPKKTPA--------IPTPKEAPATPSSKEASSPPA 1584

Query: 139  EDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGK-DEAA 197
                TPS     P  K+          +       + KEA        P+ E G    A 
Sbjct: 1585 ---VTPSTYKGAPSPKE--------LLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAP 1633

Query: 198  GGAAAAAAEAGAASGEQAAAPGE---EAAAGEEGAAGGDPQEAKP---QEAAVAPEKPPA 251
             G   +     ++  +   +P     +  A    A+ G P +  P   +E  VAP    A
Sbjct: 1634 KGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVAP----A 1689

Query: 252  SDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACA 311
             + T     P++   +  + +  S   C  PSA      P    APA        SS  A
Sbjct: 1690 PESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTA 1749

Query: 312  APSQEAQPECSPEAPPAEAA 331
                 +     P APP   A
Sbjct: 1750 KGKDASHSPKGPLAPPESKA 1769



 Score = 48.5 bits (114), Expect = 8e-06
 Identities = 71/284 (25%), Positives = 103/284 (36%), Gaps = 30/284 (10%)

Query: 69   KEEPAAAGSG-AASPSAAE----KGEPAAAAA--PEAGASPVEKEAPAEGEAAEPGSPTA 121
            KE PA   S  A+SP A      KG P+      P A  SP  KEAP    A  P SP  
Sbjct: 1568 KEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTP-PAVTPPSPEK 1626

Query: 122  AEGEAASAASSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEG 181
                 A   + TS P        SP++      K   +  ++ K  G   KK      E 
Sbjct: 1627 GPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASK--GLPAKKGPTALKEV 1684

Query: 182  GEAEAPAA---------EGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGG 232
              A AP +         +G + + +   +       +A           A A        
Sbjct: 1685 LVAPAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKD 1744

Query: 233  DPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPS--------- 283
              + AK ++A+ +P+ P A  E+KA+   +    +K      SA+   APS         
Sbjct: 1745 SSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAP 1804

Query: 284  AAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEAPP 327
            +  P  PP+Q+  P+       + S   AP+ E   E  P  PP
Sbjct: 1805 SPVPTLPPKQQFLPSSPGLVLESPSKPLAPADE--DELLPLIPP 1846



 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 79/323 (24%), Positives = 105/323 (32%), Gaps = 62/323 (19%)

Query: 22   AAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAA------DKEEPAAA 75
            A VASSP +   +++G       AS  A+  G    L A+  +P         K  P   
Sbjct: 761  APVASSPKECPTEDSG-------ASATASSKGTLTYL-ADSPSPLGVSVSPQTKRPPTKK 812

Query: 76   GSGAASPSAAEKGEPA----AAAAPEAGAS-PVEKEAPAEGEAAEPGSPTAAEGEAASAA 130
            GS            P     A+  PE   S    K++PA   +  P SP   +G    +A
Sbjct: 813  GSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSP---KGAPTPSA 869

Query: 131  SSTSSPKAEDGATPSPSNETPKKKKKRFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAE 190
             +  SPK   G T  P  ETP        F K                      E PA  
Sbjct: 870  VTPLSPK---GVT-LPPKETPTPSVVNLPFPK----------------------EGPATP 903

Query: 191  GGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPP 250
              K   A    +++ +   A+      P   +  G        P   K   A  +P+  P
Sbjct: 904  APKQAPALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAP 963

Query: 251  ASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSAC 310
                  AA  PS     K   A  S      P AA P +P    A P+  P  A    A 
Sbjct: 964  TPP---AATPPSP----KGGPATPSPKGAPTPPAATPPSPKGGPATPS--PKGAPTPPAV 1014

Query: 311  AAPSQEAQPECSP-----EAPPA 328
              PS +  P  +P       PPA
Sbjct: 1015 TPPSPKGSPAATPFPKGASTPPA 1037



 Score = 47.4 bits (111), Expect = 2e-05
 Identities = 87/361 (24%), Positives = 112/361 (31%), Gaps = 60/361 (16%)

Query: 11   KGEAAAERPGEAAV---ASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANG--SAP 65
            KG  A   P  A     A+ PS   G      K     +PAA     K  L       AP
Sbjct: 1137 KGGLATPPPKGAPTTPAATPPSPKGGLATPPPK-GAPTTPAATPPSPKGGLATPSPKGAP 1195

Query: 66   AADKEEPAAAGSGAASPSAAEKGEPAAAAA----PEAG-ASPVEKEAPAEGEAAEP---G 117
                  P +   G A+PS   KG P   AA    P+ G A+P  K AP    A  P   G
Sbjct: 1196 TTPAATPPSPKGGLATPSP--KGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKG 1253

Query: 118  SPTAAEGEAASAASSTSSPKAEDG-------ATPSPSNETPKKKKKRFSFKKSFKLSGFS 170
             P     + A    + + P  + G         P+P+  TP   K            G  
Sbjct: 1254 GPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPK------------GGP 1301

Query: 171  FKKNKKEAGEGGEAEAPAAEG--GKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAG--- 225
                 K A     A  P+ +G  G     G     A    +  G         ++ G   
Sbjct: 1302 ATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPT 1361

Query: 226  -EEGAAGGDPQEAKPQEA---AVAPEKP--------PASDETKAAEEPSKVEEKKAEEAG 273
                  G  P  A P      A+ P  P        P  D T  A  P  +  KKA    
Sbjct: 1362 TPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIP--LSPKKAPATP 1419

Query: 274  ASAAACEAPSAAGPGAPPEQEAAPAEEPAAAAASSACAAPSQEAQPEC------SPEAPP 327
             +      PS      P     +  + PA +A     A PS +  P        SP+ PP
Sbjct: 1420 VTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEPP 1479

Query: 328  A 328
            A
Sbjct: 1480 A 1480



 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 86/353 (24%), Positives = 119/353 (33%), Gaps = 53/353 (15%)

Query: 11   KGEAAAERPGEAAV---ASSPSKANGQENGHVKVNGDASPAAAESGAKEELQA---NGSA 64
            KG  A   P  A     A+ PS   G      K      PAA     K  L      G+ 
Sbjct: 1229 KGGLATPSPKGAPTTPAATPPSPKGGPATPPPK-GAPTPPAATPPSLKGGLATPPHKGAP 1287

Query: 65   PAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGA--SPVEKEAPAEGEAAEP---GSP 119
              A    P+  G  A SP       PAA      G+  +P  K AP       P   G+P
Sbjct: 1288 NPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTP 1347

Query: 120  TAAEGEAASAASSTSSPKAEDGATP---SPSNE-----TPKKKKK--RFSFKKSFKLSGF 169
            T      +S    T+ P +++G TP   +PS++     TP   K+       K    S  
Sbjct: 1348 TLPATTPSSKGGPTT-PSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPA 1406

Query: 170  SFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGA 229
                + K+A        PA    ++ AA  +                AP   A  G    
Sbjct: 1407 VIPLSPKKA--------PATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPAT 1458

Query: 230  AGGDPQEAKPQEAAVAPEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAPS--AAGP 287
                     P     +P++PPA  +   +  P K        A A+ A   AP+  A  P
Sbjct: 1459 PSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKK--------APATPAPMGAPTLPAVIP 1510

Query: 288  GAPPEQEAAPA--EEPAAAAA------SSACAAPSQEAQPEC----SPEAPPA 328
             +P E  A P+   +P A  A      + A  AP +   P      SP+  PA
Sbjct: 1511 SSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPA 1563



 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 68/287 (23%), Positives = 100/287 (34%), Gaps = 15/287 (5%)

Query: 47  PAAAESGAKEELQANGSAPAADKEEPAAAGSGAASPSAAEKGEPAAAAAPEAGASPVEKE 106
           P A+E+        N  AP A             SPS    G P      + G S     
Sbjct: 702 PTASENCPVAPSPQNTCAPLATLVLAPEIPKSVPSPSLPPAGTPPGTKKVD-GISHTSAL 760

Query: 107 APAEGEAAEPGSPTAAEGEAASAASSTSSPKAEDGATP---SPSNETPKKKKKRFSFKKS 163
           AP      E   PT   G +A+A+S  +     D  +P   S S +T +   K+ S    
Sbjct: 761 APVASSPKE--CPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPD 818

Query: 164 FKLSGFSFKKNKKEAGEGGEAEAPAAEGGKDEAAGGAAAAAAEAGAASGEQAAAPGEEAA 223
             +   S   +  EA    E  + + +G KD     + A        S + A  P     
Sbjct: 819 TPIGNLSSPVSPVEASFLPE-NSLSFQGSKD-----SPATTHSPTPPSPKGAPTPSAVTP 872

Query: 224 AGEEGAAGGDPQEAKPQEAAVA-PEKPPASDETKAAEEPSKVEEKKAEEAGASAAACEAP 282
              +G      +   P    +  P++ PA+   K A   S +     ++A A+ A    P
Sbjct: 873 LSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALS-MTSSSPKKARATPAPKGIP 931

Query: 283 SAAGP-GAPPEQEAAPAEEPAAAAASSACAAPSQEAQPECSPEAPPA 328
           ++  P GAP    A P       A  S   AP+  A    SP+  PA
Sbjct: 932 ASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPA 978



 Score = 36.2 bits (82), Expect = 0.042
 Identities = 80/383 (20%), Positives = 124/383 (32%), Gaps = 89/383 (23%)

Query: 21  EAAVASSPSKANGQENGHVKVNGDASPAAAESGAKEELQANGSAPAADKEEPAAAGSGA- 79
           +AA  +SPS  +   +  + ++ +A+ A    G    +      PA+    P    S A 
Sbjct: 564 QAAPKNSPSFQSTSSSPEIPLSPEATLAKKSLGEPLPI----GKPASSMTSPLGVNSSAS 619

Query: 80  -------ASPSAAEKGEPAAAAAPEAGASPVEKEAPAEGEAAEPGSPTAAEGEAASAASS 132
                  A P +A     ++   P   A P+E   PA G A     PT A+G   S  ++
Sbjct: 620 VIKTDSYAGPDSAGPLLKSSLITPTVAAFPLESADPA-GVA-----PTTAKG--TSTYTT 671

Query: 133 TSSPKAEDGATPSPSNETPKK------------------------------------KKK 156
           T+SP  E   + +P N   K+                                    +  
Sbjct: 672 TASPFLEGTVSLAPKNHPVKEGTLTTLPLVPTASENCPVAPSPQNTCAPLATLVLAPEIP 731

Query: 157 RFSFKKSFKLSGFSFKKNKKEAGEGGEAEAPAAEGGKD--EAAGGAAAAAAEAG------ 208
           +     S   +G      K +      A AP A   K+      GA+A A+  G      
Sbjct: 732 KSVPSPSLPPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSGASATASSKGTLTYLA 791

Query: 209 --------AASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEK------------ 248
                   + S +    P ++ +AG +   G       P EA+  PE             
Sbjct: 792 DSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPA 851

Query: 249 ---PPASDETKAAEEPSKVEEKKAEEAGASAAACEAPSAAGPGAPPEQEAAPAEEPAAAA 305
               P     K A  PS V     +           PS      P E  A PA  P  A 
Sbjct: 852 TTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPA--PKQAP 909

Query: 306 ASSACAAPSQEAQPECSPEAPPA 328
           A S  ++  ++A+   +P+  PA
Sbjct: 910 ALSMTSSSPKKARATPAPKGIPA 932



 Score = 32.7 bits (73), Expect = 0.46
 Identities = 36/133 (27%), Positives = 48/133 (36%), Gaps = 7/133 (5%)

Query: 195 EAAGGAAAAAAEAGAASGEQAAAPGEEAAAGEEGAAGGDPQEAKPQEAAVAPEKPPASDE 254
           EA     A   E      E A  P   A +    AA G P    P   + AP++ P S  
Sbjct: 4   EATETVPATEQELPQPQAETAVLPMSSALSVT--AALGQPGPTLPPPCSPAPQQCPLSAA 61

Query: 255 TKAA--EEPSKVEEKKAE-EAGASAAACEAPSAAGPGAPP--EQEAAPAEEPAAAAASSA 309
            +A+    PS +     E     S++    P    P AP        P   PAA A +S 
Sbjct: 62  NQASPFPSPSTIASTPLEVPFPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALASP 121

Query: 310 CAAPSQEAQPECS 322
             AP+ +  P  S
Sbjct: 122 MIAPTLKGTPSSS 134


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.292    0.111    0.293 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,622,594
Number of Sequences: 37866
Number of extensions: 1038224
Number of successful extensions: 27079
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 2045
Number of HSP's that attempted gapping in prelim test: 9019
Number of HSP's gapped (non-prelim): 12092
length of query: 332
length of database: 18,247,518
effective HSP length: 103
effective length of query: 229
effective length of database: 14,347,320
effective search space: 3285536280
effective search space used: 3285536280
T: 11
A: 40
X1: 17 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 44 (21.7 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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