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Search of human proteins with 15149472
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens]
(374 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens] 754 0.0
gi|4505623 pre-B-cell leukemia homeobox 1 [Homo sapiens] 490 e-139
gi|5453852 pre-B-cell leukemia homeobox 3 isoform 1 [Homo sapiens] 489 e-138
gi|27436887 pre-B-cell leukemia homeobox 2 [Homo sapiens] 472 e-133
gi|198041755 pre-B-cell leukemia homeobox 3 isoform 2 [Homo sapi... 432 e-121
gi|27502383 Meis homeobox 2 isoform h [Homo sapiens] 64 2e-10
gi|27502381 Meis homeobox 2 isoform g [Homo sapiens] 64 2e-10
gi|24762244 Meis homeobox 2 isoform a [Homo sapiens] 64 2e-10
gi|24762250 Meis homeobox 2 isoform d [Homo sapiens] 64 2e-10
gi|24762241 Meis homeobox 2 isoform c [Homo sapiens] 64 2e-10
gi|24762246 Meis homeobox 2 isoform b [Homo sapiens] 64 2e-10
gi|24762225 Meis homeobox 2 isoform f [Homo sapiens] 64 2e-10
gi|57863279 Meis1, myeloid ecotropic viral integration site 1 ho... 64 2e-10
gi|4505151 Meis homeobox 1 [Homo sapiens] 64 3e-10
gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens] 61 1e-09
gi|219275578 SIX homeobox 2 [Homo sapiens] 60 3e-09
gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens] 60 3e-09
gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo ... 59 5e-09
gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo ... 55 8e-08
gi|28178843 TG-interacting factor isoform a [Homo sapiens] 55 1e-07
gi|4507473 TG-interacting factor isoform c [Homo sapiens] 55 1e-07
gi|28178855 TG-interacting factor isoform d [Homo sapiens] 55 1e-07
gi|28178853 TG-interacting factor isoform d [Homo sapiens] 55 1e-07
gi|28178851 TG-interacting factor isoform d [Homo sapiens] 55 1e-07
gi|28178857 TG-interacting factor isoform d [Homo sapiens] 55 1e-07
gi|28178849 TG-interacting factor isoform c [Homo sapiens] 55 1e-07
gi|28178845 TG-interacting factor isoform b [Homo sapiens] 55 1e-07
gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens] 55 1e-07
gi|7705555 iroquois homeobox 4 [Homo sapiens] 52 7e-07
gi|5174681 SIX homeobox 1 [Homo sapiens] 52 1e-06
>gi|15149472 pre-B-cell leukemia homeobox 4 [Homo sapiens]
Length = 374
Score = 754 bits (1948), Expect = 0.0
Identities = 374/374 (100%), Positives = 374/374 (100%)
Query: 1 MAAPPRPAPSPPAPRRLDTSDVLQQIMAITDQSLDEAQARKHALNCHRMKPALFSVLCEI 60
MAAPPRPAPSPPAPRRLDTSDVLQQIMAITDQSLDEAQARKHALNCHRMKPALFSVLCEI
Sbjct: 1 MAAPPRPAPSPPAPRRLDTSDVLQQIMAITDQSLDEAQARKHALNCHRMKPALFSVLCEI 60
Query: 61 KEKTVVSIRGIQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGGAVARAGTATPGGCPNDN 120
KEKTVVSIRGIQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGGAVARAGTATPGGCPNDN
Sbjct: 61 KEKTVVSIRGIQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGGAVARAGTATPGGCPNDN 120
Query: 121 SIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQSRMRPVSPKEIERMVGA 180
SIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQSRMRPVSPKEIERMVGA
Sbjct: 121 SIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQSRMRPVSPKEIERMVGA 180
Query: 181 IHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSE 240
IHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSE
Sbjct: 181 IHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSE 240
Query: 241 EAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTAVDTTEVGVPGNHA 300
EAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTAVDTTEVGVPGNHA
Sbjct: 241 EAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTAVDTTEVGVPGNHA 300
Query: 301 SCLSTPSSGSSGPFPLPSAGDAFLTLRTLASLQPPPGGGCLQSQAQGSWQGATPQPATAS 360
SCLSTPSSGSSGPFPLPSAGDAFLTLRTLASLQPPPGGGCLQSQAQGSWQGATPQPATAS
Sbjct: 301 SCLSTPSSGSSGPFPLPSAGDAFLTLRTLASLQPPPGGGCLQSQAQGSWQGATPQPATAS 360
Query: 361 PAGDPGSINSSTSN 374
PAGDPGSINSSTSN
Sbjct: 361 PAGDPGSINSSTSN 374
>gi|4505623 pre-B-cell leukemia homeobox 1 [Homo sapiens]
Length = 430
Score = 490 bits (1262), Expect = e-139
Identities = 259/393 (65%), Positives = 294/393 (74%), Gaps = 34/393 (8%)
Query: 15 RRLDTSDVLQQIMAITDQSLDEAQARKHALNCHRMKPALFSVLCEIKEKTVVSIRGIQDE 74
R+ D D+LQQIM ITDQSLDEAQARKHALNCHRMKPALF+VLCEIKEKTV+SIRG Q+E
Sbjct: 39 RKQDIGDILQQIMTITDQSLDEAQARKHALNCHRMKPALFNVLCEIKEKTVLSIRGAQEE 98
Query: 75 DPPDAQLLRLDNMLLAEGVCRPEKRGRGGAVARAGTATPGGCPNDNSIEHSDYRAKLSQI 134
+P D QL+RLDNMLLAEGV PEK G G A A A A GG +DNS+EHSDYRAKLSQI
Sbjct: 99 EPTDPQLMRLDNMLLAEGVAGPEKGG-GSAAAAAAAAASGGAGSDNSVEHSDYRAKLSQI 157
Query: 135 RQIYHSELEKYEQACREFTTHVTNLLQEQSRMRPVSPKEIERMVGAIHGKFSAIQMQLKQ 194
RQIYH+ELEKYEQAC EFTTHV NLL+EQSR RP+SPKEIERMV IH KFS+IQMQLKQ
Sbjct: 158 RQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERMVSIIHRKFSSIQMQLKQ 217
Query: 195 STCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTI 254
STCEAVM LRSR LDARRKRRNF+KQATE+LNEYFYSHL+NPYPSEEAKEELA+K G+T+
Sbjct: 218 STCEAVMILRSRFLDARRKRRNFNKQATEILNEYFYSHLSNPYPSEEAKEELAKKCGITV 277
Query: 255 SQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTAVDTTEVGVPGNHASCLSTP-SSGSSGP 313
SQVSNWFGNKRIRYKKN+GKFQEEA IY KTAV T V G+ A+ STP S+GSS
Sbjct: 278 SQVSNWFGNKRIRYKKNIGKFQEEANIYAAKTAVTATNVSAHGSQANSPSTPNSAGSSSS 337
Query: 314 FPLPSAGDAFLTLRTL--ASLQPPPGGGCLQSQ--------------------------- 344
F + ++GD F+++++L S Q G +QSQ
Sbjct: 338 FNMSNSGDLFMSVQSLNGDSYQGAQVGANVQSQVDTLRHVISQTGGYSDGLAASQMYSPQ 397
Query: 345 ---AQGSWQGATPQPATASPAGDPGSINSSTSN 374
A G WQ AT + SP PGS++S TSN
Sbjct: 398 GISANGGWQDATTPSSVTSPTEGPGSVHSDTSN 430
>gi|5453852 pre-B-cell leukemia homeobox 3 isoform 1 [Homo sapiens]
Length = 434
Score = 489 bits (1259), Expect = e-138
Identities = 265/412 (64%), Positives = 297/412 (72%), Gaps = 40/412 (9%)
Query: 1 MAAPPRPAPSPPAP---RRLDTSDVLQQIMAITDQSLDEAQARKHALNCHRMKPALFSVL 57
MA PP P A R+ D D+L QIM ITDQSLDEAQA+KHALNCHRMKPALFSVL
Sbjct: 25 MALPPPPHGHEGADGDGRKQDIGDILHQIMTITDQSLDEAQAKKHALNCHRMKPALFSVL 84
Query: 58 CEIKEKTVVSIRGIQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGGAVARAGTATPGGCP 117
CEIKEKT +SIRG Q+EDPPD QL+RLDNMLLAEGV PEK G G A A A A GG
Sbjct: 85 CEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGG-GSAAAAAAAAASGGS- 142
Query: 118 NDNSIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQSRMRPVSPKEIERM 177
+DNSIEHSDYRAKL+QIRQIYH+ELEKYEQAC EFTTHV NLL+EQSR RP+SPKEIERM
Sbjct: 143 SDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRPISPKEIERM 202
Query: 178 VGAIHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSHLNNPY 237
VG IH KFS+IQMQLKQSTCEAVM LRSR LDARRKRRNFSKQATE+LNEYFYSHL+NPY
Sbjct: 203 VGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEYFYSHLSNPY 262
Query: 238 PSEEAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTAVDTTEV---G 294
PSEEAKEELA+K +T+SQVSNWFGNKRIRYKKN+GKFQEEA +Y KTAV
Sbjct: 263 PSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAVTAAHAVAAA 322
Query: 295 VPGNHASCLSTPSSGSSGPFPLPSAGDAFLTLRTLA--SLQPPPGGGCLQSQ-------- 344
V N + +TP+SGSSG F LP++GD F+ +++L S Q G +QSQ
Sbjct: 323 VQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQSQVDTLRHVI 382
Query: 345 ----------------------AQGSWQGATPQPATASPAGDPGSINSSTSN 374
A G WQ AT + SP PGS++S TSN
Sbjct: 383 NQTGGYSDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDTSN 434
>gi|27436887 pre-B-cell leukemia homeobox 2 [Homo sapiens]
Length = 430
Score = 472 bits (1214), Expect = e-133
Identities = 258/390 (66%), Positives = 287/390 (73%), Gaps = 30/390 (7%)
Query: 11 PPAPRRLDTSDVLQQIMAITDQSLDEAQARKHALNCHRMKPALFSVLCEIKEKTVVSIRG 70
P + D D+LQQIM ITDQSLDEAQA+KHALNCHRMKPALFSVLCEIKEKT +SIR
Sbjct: 45 PGGRGKQDIGDILQQIMTITDQSLDEAQAKKHALNCHRMKPALFSVLCEIKEKTGLSIRS 104
Query: 71 IQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGGAVARAGTATPGGCPNDNSIEHSDYRAK 130
Q+E+P D QL+RLDNMLLAEGV PEK G A A A A+ GG DNSIEHSDYR+K
Sbjct: 105 SQEEEPVDPQLMRLDNMLLAEGVAGPEKGGGSAAAAAAAAASGGGVSPDNSIEHSDYRSK 164
Query: 131 LSQIRQIYHSELEKYEQACREFTTHVTNLLQEQSRMRPVSPKEIERMVGAIHGKFSAIQM 190
L+QIR IYHSELEKYEQAC EFTTHV NLL+EQSR RPV+PKE+ERMV IH KFSAIQM
Sbjct: 165 LAQIRHIYHSELEKYEQACNEFTTHVMNLLREQSRTRPVAPKEMERMVSIIHRKFSAIQM 224
Query: 191 QLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKG 250
QLKQSTCEAVM LRSR LDARRKRRNFSKQATEVLNEYFYSHL+NPYPSEEAKEELA+K
Sbjct: 225 QLKQSTCEAVMILRSRFLDARRKRRNFSKQATEVLNEYFYSHLSNPYPSEEAKEELAKKC 284
Query: 251 GLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTAVDTTEVGVPGNHASCLS-TP--S 307
G+T+SQVSNWFGNKRIRYKKN+GKFQEEA IY KTAV T+ G H+ S TP S
Sbjct: 285 GITVSQVSNWFGNKRIRYKKNIGKFQEEANIYAVKTAVSVTQ----GGHSRTSSPTPPSS 340
Query: 308 SGSSGPFPLPSAGDAFLTLRTL--------------ASLQPPP-----GGGCLQS----Q 344
+GS G F L +GD FL + L S+ P GGG + S +
Sbjct: 341 AGSGGSFNLSGSGDMFLGMPGLNGDSYSASQVESLRHSMGPGGYGDNLGGGQMYSPREMR 400
Query: 345 AQGSWQGATPQPATASPAGDPGSINSSTSN 374
A GSWQ A + SP PGS++S TSN
Sbjct: 401 ANGSWQEAVTPSSVTSPTEGPGSVHSDTSN 430
>gi|198041755 pre-B-cell leukemia homeobox 3 isoform 2 [Homo
sapiens]
Length = 359
Score = 432 bits (1111), Expect = e-121
Identities = 233/361 (64%), Positives = 262/361 (72%), Gaps = 37/361 (10%)
Query: 49 MKPALFSVLCEIKEKTVVSIRGIQDEDPPDAQLLRLDNMLLAEGVCRPEKRGRGGAVARA 108
MKPALFSVLCEIKEKT +SIRG Q+EDPPD QL+RLDNMLLAEGV PEK G G A A A
Sbjct: 1 MKPALFSVLCEIKEKTGLSIRGAQEEDPPDPQLMRLDNMLLAEGVSGPEKGG-GSAAAAA 59
Query: 109 GTATPGGCPNDNSIEHSDYRAKLSQIRQIYHSELEKYEQACREFTTHVTNLLQEQSRMRP 168
A GG +DNSIEHSDYRAKL+QIRQIYH+ELEKYEQAC EFTTHV NLL+EQSR RP
Sbjct: 60 AAAASGGS-SDNSIEHSDYRAKLTQIRQIYHTELEKYEQACNEFTTHVMNLLREQSRTRP 118
Query: 169 VSPKEIERMVGAIHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEY 228
+SPKEIERMVG IH KFS+IQMQLKQSTCEAVM LRSR LDARRKRRNFSKQATE+LNEY
Sbjct: 119 ISPKEIERMVGIIHRKFSSIQMQLKQSTCEAVMILRSRFLDARRKRRNFSKQATEILNEY 178
Query: 229 FYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTAV 288
FYSHL+NPYPSEEAKEELA+K +T+SQVSNWFGNKRIRYKKN+GKFQEEA +Y KTAV
Sbjct: 179 FYSHLSNPYPSEEAKEELAKKCSITVSQVSNWFGNKRIRYKKNIGKFQEEANLYAAKTAV 238
Query: 289 DTTEV---GVPGNHASCLSTPSSGSSGPFPLPSAGDAFLTLRTLA--SLQPPPGGGCLQS 343
V N + +TP+SGSSG F LP++GD F+ +++L S Q G +QS
Sbjct: 239 TAAHAVAAAVQNNQTNSPTTPNSGSSGSFNLPNSGDMFMNMQSLNGDSYQGSQVGANVQS 298
Query: 344 Q------------------------------AQGSWQGATPQPATASPAGDPGSINSSTS 373
Q A G WQ AT + SP PGS++S TS
Sbjct: 299 QVDTLRHVINQTGGYSDGLGGNSLYSPHNLNANGGWQDATTPSSVTSPTEGPGSVHSDTS 358
Query: 374 N 374
N
Sbjct: 359 N 359
>gi|27502383 Meis homeobox 2 isoform h [Homo sapiens]
Length = 306
Score = 63.9 bits (154), Expect = 2e-10
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
++KR F K AT ++ + + HL +PYPSEE K++LA+ GLTI QV+NWF N R R +
Sbjct: 189 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQ 248
Query: 271 NM 272
M
Sbjct: 249 PM 250
>gi|27502381 Meis homeobox 2 isoform g [Homo sapiens]
Length = 388
Score = 63.9 bits (154), Expect = 2e-10
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
++KR F K AT ++ + + HL +PYPSEE K++LA+ GLTI QV+NWF N R R +
Sbjct: 264 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQ 323
Query: 271 NM 272
M
Sbjct: 324 PM 325
>gi|24762244 Meis homeobox 2 isoform a [Homo sapiens]
Length = 401
Score = 63.9 bits (154), Expect = 2e-10
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
++KR F K AT ++ + + HL +PYPSEE K++LA+ GLTI QV+NWF N R R +
Sbjct: 277 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQ 336
Query: 271 NM 272
M
Sbjct: 337 PM 338
>gi|24762250 Meis homeobox 2 isoform d [Homo sapiens]
Length = 470
Score = 63.9 bits (154), Expect = 2e-10
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
++KR F K AT ++ + + HL +PYPSEE K++LA+ GLTI QV+NWF N R R +
Sbjct: 277 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQ 336
Query: 271 NM 272
M
Sbjct: 337 PM 338
>gi|24762241 Meis homeobox 2 isoform c [Homo sapiens]
Length = 477
Score = 63.9 bits (154), Expect = 2e-10
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
++KR F K AT ++ + + HL +PYPSEE K++LA+ GLTI QV+NWF N R R +
Sbjct: 277 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQ 336
Query: 271 NM 272
M
Sbjct: 337 PM 338
>gi|24762246 Meis homeobox 2 isoform b [Homo sapiens]
Length = 394
Score = 63.9 bits (154), Expect = 2e-10
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
++KR F K AT ++ + + HL +PYPSEE K++LA+ GLTI QV+NWF N R R +
Sbjct: 277 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQ 336
Query: 271 NM 272
M
Sbjct: 337 PM 338
>gi|24762225 Meis homeobox 2 isoform f [Homo sapiens]
Length = 381
Score = 63.9 bits (154), Expect = 2e-10
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
++KR F K AT ++ + + HL +PYPSEE K++LA+ GLTI QV+NWF N R R +
Sbjct: 264 QKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQ 323
Query: 271 NM 272
M
Sbjct: 324 PM 325
>gi|57863279 Meis1, myeloid ecotropic viral integration site 1
homolog 3 isoform 2 [Homo sapiens]
Length = 358
Score = 63.9 bits (154), Expect = 2e-10
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 212 RKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKKN 271
+KR F K AT ++ + + HL++PYPSEE K++LA+ GLTI QV+NWF N R R +
Sbjct: 247 KKRGIFPKVATNIMRAWLFQHLSHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQP 306
Query: 272 M 272
M
Sbjct: 307 M 307
>gi|4505151 Meis homeobox 1 [Homo sapiens]
Length = 390
Score = 63.5 bits (153), Expect = 3e-10
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 212 RKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKKN 271
+KR F K AT ++ + + HL +PYPSEE K++LA+ GLTI QV+NWF N R R +
Sbjct: 274 KKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQP 333
Query: 272 M 272
M
Sbjct: 334 M 334
>gi|28866955 PBX/knotted 1 homeobox 1 [Homo sapiens]
Length = 436
Score = 61.2 bits (147), Expect = 1e-09
Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 16/197 (8%)
Query: 179 GAIHGKFSAIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSHLNNPYP 238
G I + S +Q+QL Q + L ++ KR K AT V+ + + H+ +PYP
Sbjct: 232 GTIRIQNSQLQLQLNQD----LSILHQDDGSSKNKRGVLPKHATNVMRSWLFQHIGHPYP 287
Query: 239 SEEAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQEEATIYTGKTAVDTTEVG--VP 296
+E+ K+++A + LT+ QV+NWF N R R + M T T K V P
Sbjct: 288 TEDEKKQIAAQTNLTLLQVNNWFINARRRILQPMLDSSCSETPKTKKKTAQNRPVQRFWP 347
Query: 297 GNHASCLSTPSSGSSGPFPLPSAGDAFLTLRT-----LASLQPPPGGGCLQSQAQGSWQG 351
+ AS ++ P P L + A +T+ T + SLQ G + Q G
Sbjct: 348 DSIASGVAQPP-----PSELTMSEGAVVTITTPVNMNVDSLQSLSSDGATLAVQQVMMAG 402
Query: 352 ATPQPATASPAGDPGSI 368
+ + S D G++
Sbjct: 403 QSEDESVDSTEEDAGAL 419
>gi|219275578 SIX homeobox 2 [Homo sapiens]
Length = 291
Score = 60.1 bits (144), Expect = 3e-09
Identities = 48/154 (31%), Positives = 63/154 (40%), Gaps = 22/154 (14%)
Query: 217 FSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQ 276
F +++ VL E+ Y+H NPYPS K ELA GLT +QVSNWF N+R R + K +
Sbjct: 131 FKEKSRSVLREW-YAH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKER 187
Query: 277 E-----EATIYTGKTAVDTTEVGVPGNHASCLSTPSSGSSGPFPLPSAGDAFLTLRTLAS 331
E + + + +G + + TP SS P L S
Sbjct: 188 ENNENSNSNSHNPLNGSGKSVLGSSEDEKTPSGTPDHSSSSPALLLS------------- 234
Query: 332 LQPPPGGGCLQSQAQGSWQGATPQPATASPAGDP 365
PPPG L S A P P DP
Sbjct: 235 -PPPPGLPSLHSLGHPPGPSAVPVPVPGGGGADP 267
>gi|116812644 PBX/knotted 1 homeobox 2 [Homo sapiens]
Length = 472
Score = 60.1 bits (144), Expect = 3e-09
Identities = 30/86 (34%), Positives = 48/86 (55%)
Query: 187 AIQMQLKQSTCEAVMTLRSRLLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEEL 246
AIQ+Q Q + L + ++ KR K AT ++ + + HL +PYP+E+ K ++
Sbjct: 265 AIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQI 324
Query: 247 ARKGGLTISQVSNWFGNKRIRYKKNM 272
A + LT+ QV+NWF N R R + M
Sbjct: 325 AAQTNLTLLQVNNWFINARRRILQPM 350
>gi|34328941 TGFB-induced factor homeobox 2-like, X-linked [Homo
sapiens]
Length = 241
Score = 59.3 bits (142), Expect = 5e-09
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
++++ N ++ ++L ++ Y H YPSEE K+ L+ K L++ Q+SNWF N R R
Sbjct: 51 KKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLQISNWFINARRRILP 110
Query: 271 NMGKFQEEATIYTGKTAVDTTEVGVPGNHASCLSTPSSGSSGP 313
+M + + I KT D + AS SG SGP
Sbjct: 111 DMLQQRRNDPIIGHKTGKDAHATHLQSTEASV--PAKSGPSGP 151
>gi|21245108 TGFB-induced factor homeobox 2-like, Y-linked [Homo
sapiens]
Length = 185
Score = 55.5 bits (132), Expect = 8e-08
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
++++ N ++ ++L ++ Y H YPSEE K+ L+ K L++ ++SNWF N R R
Sbjct: 51 KKRKGNLPAESVKILRDWMYKHRFKAYPSEEEKQMLSEKTNLSLLRISNWFINARRRILP 110
Query: 271 NMGKFQEEATIYTGKTAVD-------TTEVGVPGNHASCLST 305
+M + + I KT D +TE VP + T
Sbjct: 111 DMLQQRRNDPIIGHKTGKDAHATHLQSTEASVPAKSGPVVQT 152
>gi|28178843 TG-interacting factor isoform a [Homo sapiens]
Length = 401
Score = 55.1 bits (131), Expect = 1e-07
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
RR+R N K++ ++L ++ Y H N YPSE+ K L+++ L+ QV NWF N R R
Sbjct: 165 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLP 224
Query: 271 NM----GKFQEEATIYTGKTAVDTTE-----VGVPGNHASCLSTP-SSGSSGPFP 315
+M GK + TI + T +G+ + TP S ++GP P
Sbjct: 225 DMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNP 279
>gi|4507473 TG-interacting factor isoform c [Homo sapiens]
Length = 272
Score = 55.1 bits (131), Expect = 1e-07
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
RR+R N K++ ++L ++ Y H N YPSE+ K L+++ L+ QV NWF N R R
Sbjct: 36 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLP 95
Query: 271 NM----GKFQEEATIYTGKTAVDTTE-----VGVPGNHASCLSTP-SSGSSGPFP 315
+M GK + TI + T +G+ + TP S ++GP P
Sbjct: 96 DMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNP 150
>gi|28178855 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 55.1 bits (131), Expect = 1e-07
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
RR+R N K++ ++L ++ Y H N YPSE+ K L+++ L+ QV NWF N R R
Sbjct: 16 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLP 75
Query: 271 NM----GKFQEEATIYTGKTAVDTTE-----VGVPGNHASCLSTP-SSGSSGPFP 315
+M GK + TI + T +G+ + TP S ++GP P
Sbjct: 76 DMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNP 130
>gi|28178853 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 55.1 bits (131), Expect = 1e-07
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
RR+R N K++ ++L ++ Y H N YPSE+ K L+++ L+ QV NWF N R R
Sbjct: 16 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLP 75
Query: 271 NM----GKFQEEATIYTGKTAVDTTE-----VGVPGNHASCLSTP-SSGSSGPFP 315
+M GK + TI + T +G+ + TP S ++GP P
Sbjct: 76 DMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNP 130
>gi|28178851 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 55.1 bits (131), Expect = 1e-07
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
RR+R N K++ ++L ++ Y H N YPSE+ K L+++ L+ QV NWF N R R
Sbjct: 16 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLP 75
Query: 271 NM----GKFQEEATIYTGKTAVDTTE-----VGVPGNHASCLSTP-SSGSSGPFP 315
+M GK + TI + T +G+ + TP S ++GP P
Sbjct: 76 DMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNP 130
>gi|28178857 TG-interacting factor isoform d [Homo sapiens]
Length = 252
Score = 55.1 bits (131), Expect = 1e-07
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
RR+R N K++ ++L ++ Y H N YPSE+ K L+++ L+ QV NWF N R R
Sbjct: 16 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLP 75
Query: 271 NM----GKFQEEATIYTGKTAVDTTE-----VGVPGNHASCLSTP-SSGSSGPFP 315
+M GK + TI + T +G+ + TP S ++GP P
Sbjct: 76 DMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNP 130
>gi|28178849 TG-interacting factor isoform c [Homo sapiens]
Length = 272
Score = 55.1 bits (131), Expect = 1e-07
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
RR+R N K++ ++L ++ Y H N YPSE+ K L+++ L+ QV NWF N R R
Sbjct: 36 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLP 95
Query: 271 NM----GKFQEEATIYTGKTAVDTTE-----VGVPGNHASCLSTP-SSGSSGPFP 315
+M GK + TI + T +G+ + TP S ++GP P
Sbjct: 96 DMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNP 150
>gi|28178845 TG-interacting factor isoform b [Homo sapiens]
Length = 286
Score = 55.1 bits (131), Expect = 1e-07
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 10/115 (8%)
Query: 211 RRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKK 270
RR+R N K++ ++L ++ Y H N YPSE+ K L+++ L+ QV NWF N R R
Sbjct: 50 RRRRGNLPKESVQILRDWLYEHRYNAYPSEQEKALLSQQTHLSTLQVCNWFINARRRLLP 109
Query: 271 NM----GKFQEEATIYTGKTAVDTTE-----VGVPGNHASCLSTP-SSGSSGPFP 315
+M GK + TI + T +G+ + TP S ++GP P
Sbjct: 110 DMLRKDGKDPNQFTISRRGAKISETSSVESVMGIKNFMPALEETPFHSCTAGPNP 164
>gi|11141881 TGFB-induced factor homeobox 2 [Homo sapiens]
Length = 237
Score = 54.7 bits (130), Expect = 1e-07
Identities = 47/165 (28%), Positives = 65/165 (39%), Gaps = 34/165 (20%)
Query: 207 LLDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRI 266
L R++R N K++ ++L ++ Y H N YPSE+ K L+ + L++ Q+ NWF N R
Sbjct: 15 LAGKRKRRGNLPKESVKILRDWLYLHRYNAYPSEQEKLSLSGQTNLSVLQICNWFINARR 74
Query: 267 RYKKNM-----------------GKFQEEATIYTGKTAVDTTEVGVPGN--HASCLSTPS 307
R +M GK + A +V V P N S S P
Sbjct: 75 RLLPDMLRKDGKDPNQFTISRRGGKASDVALPRGSSPSVLAVSVPAPTNVLSLSVCSMPL 134
Query: 308 SGSSG--------------PFPLPSAGDAFLTLRTLASLQPPPGG 338
G P PL + G LTL T A P GG
Sbjct: 135 HSGQGEKPAAPFPRGELESPKPLVTPGST-LTLLTRAEAGSPTGG 178
>gi|7705555 iroquois homeobox 4 [Homo sapiens]
Length = 519
Score = 52.4 bits (124), Expect = 7e-07
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 208 LDARRKRRNFSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIR 267
+D+ +R+N +++ T L + H NPYP++ K LA +T++QVS WF N R R
Sbjct: 140 MDSGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRR 199
Query: 268 YKK 270
KK
Sbjct: 200 LKK 202
>gi|5174681 SIX homeobox 1 [Homo sapiens]
Length = 284
Score = 51.6 bits (122), Expect = 1e-06
Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 217 FSKQATEVLNEYFYSHLNNPYPSEEAKEELARKGGLTISQVSNWFGNKRIRYKKNMGKFQ 276
F +++ VL E+ Y+H NPYPS K ELA GLT +QVSNWF N+R R + K +
Sbjct: 131 FKEKSRGVLREW-YAH--NPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKER 187
Query: 277 E 277
E
Sbjct: 188 E 188
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.129 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,920,947
Number of Sequences: 37866
Number of extensions: 883984
Number of successful extensions: 5211
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 224
Number of HSP's successfully gapped in prelim test: 135
Number of HSP's that attempted gapping in prelim test: 4729
Number of HSP's gapped (non-prelim): 621
length of query: 374
length of database: 18,247,518
effective HSP length: 104
effective length of query: 270
effective length of database: 14,309,454
effective search space: 3863552580
effective search space used: 3863552580
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.