SGCE 5033

Name: SGCE	Sequence: fasta or formatted (462aa)		NCBI GI: 150378454
Description: sarcoglycan, epsilon isoform 1		Referenced in: Muscle
Other entries for this name: alt prot [437aa] sarcoglycan, epsilon isoform 2 alt prot [451aa] sarcoglycan, epsilon isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.8 22 1 C cysteine 1.5 7 2 D aspartate 4.8 22 1 E glutamate 5.8 27 2 F phenylalanine 3.9 18 2 G glycine 6.1 28 2 H histidine 1.7 8 2 I isoleucine 6.1 28 2 K lysine 4.1 19 2 L leucine 8.2 38 2 M methionine 2.8 13 1 N asparagine 4.5 21 1 P proline 8.9 41 4 Q glutamine 5.4 25 3 R arginine 5.6 26 2 S serine 6.1 28 2 T threonine 6.7 31 2 V valine 6.7 31 1 W tryptophan 2.2 10 2 Y tyrosine 4.1 19 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sarcoglycan, epsilon isoform 1 SGCE 0.927 sarcoglycan, epsilon isoform 2 SGCE 0.887 sarcoglycan, epsilon isoform 3 SGCA 0.313 sarcoglycan, alpha isoform 1 precursor SGCA 0.135 sarcoglycan, alpha isoform 2 precursor ZNF573 0.018 zinc finger protein 573 PPIL3 0.017 peptidylprolyl isomerase-like 3 isoform PPIL3a [Homo... CSF2RA 0.016 colony stimulating factor 2 receptor alpha chain is... ZNF283 0.016 zinc finger protein 283 UTY 0.014 tetratricopeptide repeat protein isoform 1 RPP30 0.013 ribonuclease P/MRP 30kDa subunit isoform a RUNDC2B 0.013 RUN domain containing 2B LOC100128682 0.013 PREDICTED: hypothetical protein LOC100128682 LOC100128682 0.013 PREDICTED: hypothetical protein LOC100128682 LOC100128682 0.013 PREDICTED: hypothetical protein LOC100128682 C16orf89 0.013 hypothetical protein LOC146556 isoform 1 MAP3K15 0.012 mitogen-activated protein kinase kinase kinase 15 [... CASP7 0.012 caspase 7 isoform beta MOG 0.010 myelin oligodendrocyte glycoprotein isoform beta4 pr... MOG 0.010 myelin oligodendrocyte glycoprotein isoform alpha4 p... SLC39A14 0.009 solute carrier family 39 (zinc transporter), member... LOC100292671 0.009 PREDICTED: similar to CYorf16 protein LOC100290384 0.009 PREDICTED: hypothetical protein XP_002348288 LOC100288465 0.009 PREDICTED: hypothetical protein XP_002343910 BEND2 0.009 BEN domain containing 2 APBA1 0.007 amyloid beta A4 precursor protein-binding, family A,... ADARB1 0.007 RNA-specific adenosine deaminase B1 isoform 3 ADARB1 0.007 RNA-specific adenosine deaminase B1 isoform 2 GPA33 0.006 transmembrane glycoprotein A33 precursor LOC100128260 0.005 PREDICTED: hCG_1742852 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.