SGCA 29435

Name: SGCA	Sequence: fasta or formatted (387aa)		NCBI GI: 4506911
Description: sarcoglycan, alpha isoform 1 precursor		Referenced in: Muscle
Other entries for this name: alt prot [263aa] sarcoglycan, alpha isoform 2 precursor
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.0 27 2 C cysteine 2.1 8 2 D aspartate 5.9 23 1 E glutamate 6.2 24 2 F phenylalanine 3.4 13 2 G glycine 5.9 23 2 H histidine 4.9 19 2 I isoleucine 2.3 9 1 K lysine 1.3 5 1 L leucine 14.5 56 3 M methionine 1.6 6 1 N asparagine 1.3 5 1 P proline 9.8 38 2 Q glutamine 3.6 14 2 R arginine 6.5 25 2 S serine 5.2 20 1 T threonine 7.0 27 2 V valine 8.5 33 2 W tryptophan 1.0 4 1 Y tyrosine 2.1 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sarcoglycan, alpha isoform 1 precursor SGCA 0.490 sarcoglycan, alpha isoform 2 precursor SGCE 0.380 sarcoglycan, epsilon isoform 1 SGCE 0.380 sarcoglycan, epsilon isoform 2 SGCE 0.360 sarcoglycan, epsilon isoform 3 ZAN 0.014 zonadhesin isoform 3 ZAN 0.014 zonadhesin isoform 6 PTPRE 0.010 protein tyrosine phosphatase, receptor type, E isofor... ITGB4 0.010 integrin beta 4 isoform 2 precursor ITGB4 0.010 integrin beta 4 isoform 1 precursor ITGB4 0.010 integrin beta 4 isoform 3 precursor LOC100133915 0.010 PREDICTED: hypothetical protein LAYN 0.009 layilin C15orf2 0.009 hypothetical protein LOC23742 LOC100291393 0.008 PREDICTED: hypothetical protein XP_002347924 OTUD1 0.006 OTU domain containing 1 LOC727832 0.006 golgi autoantigen, golgin subfamily a-like LOC283767 0.006 golgi autoantigen, golgin subfamily a-like LILRB2 0.006 leukocyte immunoglobulin-like receptor, subfamily B... LOC645202 0.006 PREDICTED: hypothetical protein LOC645202 XRN2 0.006 5'-3' exoribonuclease 2 DCBLD2 0.005 discoidin, CUB and LCCL domain containing 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.