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Search of human proteins with 150378447
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|150378447 zinc and ring finger 3 [Homo sapiens]
(836 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|150378447 zinc and ring finger 3 [Homo sapiens] 1750 0.0
gi|56711322 ring finger protein 43 [Homo sapiens] 244 2e-64
gi|58331204 ring finger protein 150 [Homo sapiens] 94 5e-19
gi|29788758 ring finger protein 130 [Homo sapiens] 86 1e-16
gi|34577087 ring finger protein 13 [Homo sapiens] 83 9e-16
gi|6005864 ring finger protein 13 [Homo sapiens] 83 9e-16
gi|63025220 ring finger protein 215 [Homo sapiens] 76 1e-13
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 74 4e-13
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 74 6e-13
gi|14149702 ring finger protein 167 [Homo sapiens] 74 7e-13
gi|29789407 ring finger protein 149 [Homo sapiens] 71 5e-12
gi|21040269 ring finger protein 133 [Homo sapiens] 67 5e-11
gi|57165361 ring finger protein 165 [Homo sapiens] 64 6e-10
gi|150170725 zinc and ring finger 4 [Homo sapiens] 63 1e-09
gi|37675277 ring finger protein 148 [Homo sapiens] 63 1e-09
gi|34452686 ring finger protein, LIM domain interacting [Homo sa... 62 2e-09
gi|34452684 ring finger protein, LIM domain interacting [Homo sa... 62 2e-09
gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo ... 62 2e-09
gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo ... 62 2e-09
gi|5174653 ring finger protein 6 [Homo sapiens] 61 5e-09
gi|34305295 ring finger protein 6 [Homo sapiens] 61 5e-09
gi|34305293 ring finger protein 6 [Homo sapiens] 61 5e-09
gi|33859668 Rabring 7 [Homo sapiens] 60 6e-09
gi|7662244 DAZ interacting protein 3, zinc finger [Homo sapiens] 60 8e-09
gi|37622894 ring finger protein 126 [Homo sapiens] 60 8e-09
gi|37595553 ring finger protein 111 [Homo sapiens] 59 2e-08
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 57 5e-08
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 57 5e-08
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 57 5e-08
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 57 5e-08
>gi|150378447 zinc and ring finger 3 [Homo sapiens]
Length = 836
Score = 1750 bits (4533), Expect = 0.0
Identities = 836/836 (100%), Positives = 836/836 (100%)
Query: 1 MHPLGLCNNNDEEDLYEYGWVGVVKLEQPELDPKPCLTVLGKAKRAVQRGATAVIFDVSE 60
MHPLGLCNNNDEEDLYEYGWVGVVKLEQPELDPKPCLTVLGKAKRAVQRGATAVIFDVSE
Sbjct: 1 MHPLGLCNNNDEEDLYEYGWVGVVKLEQPELDPKPCLTVLGKAKRAVQRGATAVIFDVSE 60
Query: 61 NPEAIDQLNQGSEDPLKRPVVYVKGADAIKLMNIVNKQKVARARIQHRPPRQPTEYFDMG 120
NPEAIDQLNQGSEDPLKRPVVYVKGADAIKLMNIVNKQKVARARIQHRPPRQPTEYFDMG
Sbjct: 61 NPEAIDQLNQGSEDPLKRPVVYVKGADAIKLMNIVNKQKVARARIQHRPPRQPTEYFDMG 120
Query: 121 IFLAFFVVVSLVCLILLVKIKLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGRREGSCG 180
IFLAFFVVVSLVCLILLVKIKLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGRREGSCG
Sbjct: 121 IFLAFFVVVSLVCLILLVKIKLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGRREGSCG 180
Query: 181 ALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQ 240
ALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQ
Sbjct: 181 ALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQ 240
Query: 241 KGNPSAVCVETSNLSRGRQQRVTLPVHYPGRVHRTNAIPAYPTRTSMDSHGNPVTLLTMD 300
KGNPSAVCVETSNLSRGRQQRVTLPVHYPGRVHRTNAIPAYPTRTSMDSHGNPVTLLTMD
Sbjct: 241 KGNPSAVCVETSNLSRGRQQRVTLPVHYPGRVHRTNAIPAYPTRTSMDSHGNPVTLLTMD 300
Query: 301 RHGEQSLYSPQTPAYIRSYPPLHLDHSLAAHRCGLEHRAYSPAHPFRRPKLSGRSFSKAA 360
RHGEQSLYSPQTPAYIRSYPPLHLDHSLAAHRCGLEHRAYSPAHPFRRPKLSGRSFSKAA
Sbjct: 301 RHGEQSLYSPQTPAYIRSYPPLHLDHSLAAHRCGLEHRAYSPAHPFRRPKLSGRSFSKAA 360
Query: 361 CFSQYETMYQHYYFQGLSYPEQEGQSPPSLAPRGPARAFPPSGSGSLLFPTVVHVAPPSH 420
CFSQYETMYQHYYFQGLSYPEQEGQSPPSLAPRGPARAFPPSGSGSLLFPTVVHVAPPSH
Sbjct: 361 CFSQYETMYQHYYFQGLSYPEQEGQSPPSLAPRGPARAFPPSGSGSLLFPTVVHVAPPSH 420
Query: 421 LESGSTSSFSCYHGHRSVCSGYLADCPGSDSSSSSSSGQCHCSSSDSVVDCTEVSNQGVY 480
LESGSTSSFSCYHGHRSVCSGYLADCPGSDSSSSSSSGQCHCSSSDSVVDCTEVSNQGVY
Sbjct: 421 LESGSTSSFSCYHGHRSVCSGYLADCPGSDSSSSSSSGQCHCSSSDSVVDCTEVSNQGVY 480
Query: 481 GSCSTFRSSLSSDYDPFIYRSRSPCRASEAGGSGSSGRGPALCFEGSPPPEELPAVHSHG 540
GSCSTFRSSLSSDYDPFIYRSRSPCRASEAGGSGSSGRGPALCFEGSPPPEELPAVHSHG
Sbjct: 481 GSCSTFRSSLSSDYDPFIYRSRSPCRASEAGGSGSSGRGPALCFEGSPPPEELPAVHSHG 540
Query: 541 AGRGEPWPGPASPSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEASPGAAPDLRRT 600
AGRGEPWPGPASPSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEASPGAAPDLRRT
Sbjct: 541 AGRGEPWPGPASPSGDQVSTCSLEMNYSSNSSLEHRGPNSSTSEVGLEASPGAAPDLRRT 600
Query: 601 WKGGHELPSCACCCEPQPSPAGPSAGAAGSSTLFLGPHLYEGSGPAGGEPQSGSSQGLYG 660
WKGGHELPSCACCCEPQPSPAGPSAGAAGSSTLFLGPHLYEGSGPAGGEPQSGSSQGLYG
Sbjct: 601 WKGGHELPSCACCCEPQPSPAGPSAGAAGSSTLFLGPHLYEGSGPAGGEPQSGSSQGLYG 660
Query: 661 LHPDHLPRTDGVKYEGLPCCFYEEKQVARGGGGGSGCYTEDYSVSVQYTLTEEPPPGCYP 720
LHPDHLPRTDGVKYEGLPCCFYEEKQVARGGGGGSGCYTEDYSVSVQYTLTEEPPPGCYP
Sbjct: 661 LHPDHLPRTDGVKYEGLPCCFYEEKQVARGGGGGSGCYTEDYSVSVQYTLTEEPPPGCYP 720
Query: 721 GARDLSQRIPIIPEDVDCDLGLPSDCQGTHSLGSWGGTRGPDTPRPHRGLGATREEERAL 780
GARDLSQRIPIIPEDVDCDLGLPSDCQGTHSLGSWGGTRGPDTPRPHRGLGATREEERAL
Sbjct: 721 GARDLSQRIPIIPEDVDCDLGLPSDCQGTHSLGSWGGTRGPDTPRPHRGLGATREEERAL 780
Query: 781 CCQARALLRPGCPPEEAGAVRANFPSALQDTQESSTTATEAAGPRSHSADSSSPGA 836
CCQARALLRPGCPPEEAGAVRANFPSALQDTQESSTTATEAAGPRSHSADSSSPGA
Sbjct: 781 CCQARALLRPGCPPEEAGAVRANFPSALQDTQESSTTATEAAGPRSHSADSSSPGA 836
>gi|56711322 ring finger protein 43 [Homo sapiens]
Length = 783
Score = 244 bits (623), Expect = 2e-64
Identities = 185/512 (36%), Positives = 255/512 (49%), Gaps = 97/512 (18%)
Query: 2 HPLGLCNNNDEEDLYEYGWVGVVKLEQPELDPKPCLTVLGKAKRAVQRGATAVIFDVSEN 61
HPL LCN +D+++L E G++ +VKLE P P+PCL++ KA+ A +RGA+AV+FD++E+
Sbjct: 86 HPLYLCNASDDDNL-EPGFISIVKLESPRRAPRPCLSLASKARMAGERGASAVLFDITED 144
Query: 62 PEAIDQLNQGSEDPLKRPVVYVKGADAIKLMNIVNKQKVARARIQHRPPRQPTEYFDMGI 121
A +QL Q L PVV + G DA KLM V K + A RI+ + P +Y D+ I
Sbjct: 145 RAAAEQLQQPLG--LTWPVVLIWGNDAEKLMEFVYKNQKAHVRIELKEPPAWPDY-DVWI 201
Query: 122 FLAFFVVVSLVCLILLVKIKLKQRRSQ-NSMNRLAVQALEKMETRKFNSKSKGRR----- 175
+ + ++ L +++I+ + R S+ + + + A+ ++ TR++ + + R
Sbjct: 202 LMTVVGTIFVIILASVLRIRCRPRHSRPDPLQQRTAWAISQLATRRYQASCRQARGEWPD 261
Query: 176 EGSCGALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRH 235
GS S SS CAICLE++ +G+ELRVI C H FHR CVDPWL QH TCP C
Sbjct: 262 SGS-------SCSSAPVCAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMF 314
Query: 236 NIIEQKGNPSAVCVETSNLSRGRQQRVTLPVHYPGRVHRTNAIPAY----PTRTSMDSHG 291
NI E ++ S GR R+ L +PG H +PA P+R+++
Sbjct: 315 NITEGDSFSQSLGPSRSYQEPGR--RLHLIRQHPGHAH--YHLPAAYLLGPSRSAVARPP 370
Query: 292 NPVTLLTMDRHGEQSLYSPQTPAYIRSYPPLHLDHSLAAHRCGLEHRAYSPAHPFRRPKL 351
P P P+ P H AAH P P + +L
Sbjct: 371 RP---------------GPFLPSQEPGMGPRHHRFPRAAH----------PRAPGEQQRL 405
Query: 352 SGRSFSKAACFSQYETMYQHYYFQ--GLSYPEQEGQSPPSLAPRGPARAFPPSGSGSLLF 409
+G QH Y Q GLS+ + Q P+ P RA PP SGS
Sbjct: 406 AGA---------------QHPYAQGWGLSHLQSTSQH-PAACPVPLRRARPPDSSGS--- 446
Query: 410 PTVVHVAPPSHLESGSTSSFSCYHGHRSVCSGYLADCPGSDSSSSSSSGQCHCSSSDSVV 469
ES T SGYLAD P SD SSSG CH SSSDSVV
Sbjct: 447 -----------GESYCTER-----------SGYLADGPASD----SSSGPCHGSSSDSVV 480
Query: 470 DCTEVSNQGVYGSCSTFRSSLSSDYDPFIYRS 501
+CT++S QGV+GS STF SSLSSD+DP +Y S
Sbjct: 481 NCTDISLQGVHGSSSTFCSSLSSDFDPLVYCS 512
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 94.0 bits (232), Expect = 5e-19
Identities = 68/234 (29%), Positives = 112/234 (47%), Gaps = 31/234 (13%)
Query: 31 LDPKPCLTVLGKAKRAVQRGATAV-IFDVSENP-EAIDQLNQGSEDPLKRPVVYVKGADA 88
L PK T K + A + A+AV IF+V N E I + G ED + + KG +
Sbjct: 120 LIPKGNCTYRDKIRNAFLQNASAVVIFNVGSNTNETITMPHAGVEDIVAIMIPEPKGKEI 179
Query: 89 IKLMN----IVNKQKVARARIQHRPPRQPTEYFDMGIFLAFFVVVSLVCLILLVKIKLKQ 144
+ L+ + + +Q R + + F+V+ ++ L LV +++
Sbjct: 180 VSLLERNITVTMYITIGTRNLQKYVSRTSVVFVSIS-----FIVLMIISLAWLVFYYIQR 234
Query: 145 RRSQNSMNR-------LAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICL 197
R N+ +R A +A+ K++ R KG +E + S +CA+C+
Sbjct: 235 FRYANARDRNQRRLGDAAKKAISKLQIRTIK---KGDKE---------TESDFDNCAVCI 282
Query: 198 EKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKG-NPSAVCVE 250
E Y + +R++PC H FH+ CVDPWLL H TCP C+ NI++ G P+A C++
Sbjct: 283 EGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNILKALGIPPNADCMD 336
>gi|29788758 ring finger protein 130 [Homo sapiens]
Length = 419
Score = 86.3 bits (212), Expect = 1e-16
Identities = 70/264 (26%), Positives = 118/264 (44%), Gaps = 40/264 (15%)
Query: 42 KAKRAVQRGATAV-IFDVSENPEAIDQLNQGSEDPLKRPVVYVKGADAIKLM--NIVNKQ 98
K RA A AV I++ E + + G+ D + + ++G D + + NI +
Sbjct: 118 KISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKDILSYLEKNISVQM 177
Query: 99 KVARARIQHRPPRQPTEYFDMGIFLAFFVVVSLVCLILL------------VKIKLKQRR 146
+A R P + F G + FV +S + L+++ ++ + R
Sbjct: 178 TIAVGT------RMPPKNFSRGSLV--FVSISFIVLMIISSAWLIFYFIQKIRYTNARDR 229
Query: 147 SQNSMNRLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEEL 206
+Q + A +A+ K+ TR + KG +E + CA+C+E Y + +
Sbjct: 230 NQRRLGDAAKKAISKLTTR---TVKKGDKE---------TDPDFDHCAVCIESYKQNDVV 277
Query: 207 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKG-NPSAVCVETSNLSRGRQQRVTLP 265
R++PC H FH+ CVDPWL +H TCP C+ NI++ G P+ C + R R T
Sbjct: 278 RILPCKHVFHKSCVDPWLSEHCTCPMCKLNILKALGIVPNLPCTDNVAFDMERLTR-TQA 336
Query: 266 VHYP---GRVHRTNAIPAYPTRTS 286
V+ G + N++ P RTS
Sbjct: 337 VNRRSALGDLAGDNSLGLEPLRTS 360
>gi|34577087 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 83.2 bits (204), Expect = 9e-16
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 32/195 (16%)
Query: 58 VSENPEAIDQLNQGSED--PLKR---PVVYVKGADAIKLMNIVNKQKVARARIQHRPPRQ 112
+ N ++ D ++ GS D LK+ P V++ + A L + +K +
Sbjct: 120 IVHNVDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFTYEKGGHLILV------ 173
Query: 113 PTEYFDMGIFLAFFVVVSLVCLILLVKI---KLKQRRSQNSMNRLAVQALEKMETRKFNS 169
P + +L F+++ +CLIL+V K Q R + NRL L+K+ KF
Sbjct: 174 PEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKK 233
Query: 170 KSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQ-HH 228
CAICL++Y DG++LR++PC+H +H KCVDPWL +
Sbjct: 234 -----------------GDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 229 TCPHCRHNIIEQKGN 243
TCP C+ ++ +G+
Sbjct: 277 TCPVCKQKVVPSQGD 291
>gi|6005864 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 83.2 bits (204), Expect = 9e-16
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 32/195 (16%)
Query: 58 VSENPEAIDQLNQGSED--PLKR---PVVYVKGADAIKLMNIVNKQKVARARIQHRPPRQ 112
+ N ++ D ++ GS D LK+ P V++ + A L + +K +
Sbjct: 120 IVHNVDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFTYEKGGHLILV------ 173
Query: 113 PTEYFDMGIFLAFFVVVSLVCLILLVKI---KLKQRRSQNSMNRLAVQALEKMETRKFNS 169
P + +L F+++ +CLIL+V K Q R + NRL L+K+ KF
Sbjct: 174 PEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKK 233
Query: 170 KSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQ-HH 228
CAICL++Y DG++LR++PC+H +H KCVDPWL +
Sbjct: 234 -----------------GDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 229 TCPHCRHNIIEQKGN 243
TCP C+ ++ +G+
Sbjct: 277 TCPVCKQKVVPSQGD 291
>gi|63025220 ring finger protein 215 [Homo sapiens]
Length = 377
Score = 75.9 bits (185), Expect = 1e-13
Identities = 45/137 (32%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 103 ARIQHRPPRQPTEYFDMGIFLAFFVVVSLVCLILLVKIKLKQRRSQNSMNRLAVQA-LEK 161
+R Q + P Q ++ A +V L+C L+V+ + ++ S+ S L Q L K
Sbjct: 243 SRAQEQKPLQQ-------LWNAILLVAMLLCTGLVVQAQ--RQASRQSQRELGGQVDLFK 293
Query: 162 METRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVD 221
+ + K RR A L CA+CL+ + + + LRV+PC H FHR CVD
Sbjct: 294 RRVVRRLASLKTRRCRLSRAAQGLPDPGAETCAVCLDYFCNKQWLRVLPCKHEFHRDCVD 353
Query: 222 PWLLQHHTCPHCRHNII 238
PWL+ TCP C+ N++
Sbjct: 354 PWLMLQQTCPLCKFNVL 370
>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
Length = 402
Score = 74.3 bits (181), Expect = 4e-13
Identities = 58/242 (23%), Positives = 108/242 (44%), Gaps = 25/242 (10%)
Query: 7 CNNNDEEDLYEYGWVGVVKLEQPELDPKPCLTVLGKAKRAVQRGATAV-IFDVSENP-EA 64
C++N E + W+ +++ + T K + A +R A AV I++ E +
Sbjct: 78 CDHNTEFSNTKKPWIALIE--------RGNCTFSEKIQTAGRRNADAVVIYNAPETGNQT 129
Query: 65 IDQLNQGSEDPLKRPVVYVKGADAIK-LMNIVNKQKVARARIQHRPPRQPTEYFDMGIFL 123
I N G+ D + + +KG ++ + + V +H P Y + +
Sbjct: 130 IQMANFGAVDIVAIMIGNLKGTKILQSIQRGIQVTMVIEVGKKHGP--WVNHYSIFFVSV 187
Query: 124 AFFVVVSLVC--LILLVKIKLKQRRSQNSMNR-LAVQALEKMETRKFNSKSKGRREGSCG 180
+FF++ + I +L+ R+Q+ R L A + + + + +G +E
Sbjct: 188 SFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQLRTLKQGDKE---- 243
Query: 181 ALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQ 240
CA+C+E Y + +R++ C H FH+ CVDPWLL+H TCP C+ +I++
Sbjct: 244 -----IGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKCDILKA 298
Query: 241 KG 242
G
Sbjct: 299 LG 300
>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
Length = 428
Score = 73.9 bits (180), Expect = 6e-13
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 17/211 (8%)
Query: 38 TVLGKAKRAVQRGAT-AVIFDV-SENPEAIDQLNQGSEDPLKRPVVYVKGADAIK-LMNI 94
T K A +RGA+ AVIF+ E I + G+ D + + +KG ++ +
Sbjct: 127 TFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMIGNLKGTKILQSIQRG 186
Query: 95 VNKQKVARARIQHRPPRQPTEYFDMGIFLAFFVVVSLVC--LILLVKIKLKQRRSQNSMN 152
+ V +H P Y + ++FF++ + I +L+ R+Q+
Sbjct: 187 IQVTMVIEVGKKHGP--WVNHYSIFFVSVSFFIITAATVGYFIFYSARRLRNARAQSRKQ 244
Query: 153 R-LAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEELRVIPC 211
R L A + + + + +G +E CA+C+E Y + +R++ C
Sbjct: 245 RQLKADAKKAIGRLQLRTLKQGDKE---------IGPDGDSCAVCIELYKPNDLVRILTC 295
Query: 212 THRFHRKCVDPWLLQHHTCPHCRHNIIEQKG 242
H FH+ CVDPWLL+H TCP C+ +I++ G
Sbjct: 296 NHIFHKTCVDPWLLEHRTCPMCKCDILKALG 326
>gi|14149702 ring finger protein 167 [Homo sapiens]
Length = 350
Score = 73.6 bits (179), Expect = 7e-13
Identities = 56/208 (26%), Positives = 89/208 (42%), Gaps = 26/208 (12%)
Query: 113 PTEYFDMGIFLAFFV-VVSLVCLIL--LVKIKLKQRRSQNSMNRLAVQALEKMETRKFNS 169
P F +G +L F +V L+ L + ++ + Q R + NRL + L+++ T +
Sbjct: 164 PDNTFPLGYYLIPFTGIVGLLVLAMGAVMIARCIQHRKRLQRNRLTKEQLKQIPTHDYQK 223
Query: 170 KSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQ-HH 228
CAICL++Y DG++LRV+PC H +H +CVDPWL Q
Sbjct: 224 -----------------GDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRK 266
Query: 229 TCPHCRHNIIEQKGNPSAVCVETSNLSRGRQQRVTLPVHYPGRVHRTNAIPAYPTRTSMD 288
TCP C+ + G+ ET G + P +P RT + + PT +
Sbjct: 267 TCPICKQPVHRGPGDEDQE-EETQGQEEGDEGE---PRDHPAS-ERTPLLGSSPTLPTSF 321
Query: 289 SHGNPVTLLTMDRHGEQSLYSPQTPAYI 316
P L+ + L P +P +
Sbjct: 322 GSLAPAPLVFPGPSTDPPLSPPSSPVIL 349
>gi|29789407 ring finger protein 149 [Homo sapiens]
Length = 400
Score = 70.9 bits (172), Expect = 5e-12
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 192 DCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVET 251
+CA+C+E + + +R++PC H FHR C+DPWLL H TCP C+ ++I+ G
Sbjct: 268 NCAVCIENFKVKDIIRILPCKHIFHRICIDPWLLDHRTCPMCKLDVIKALGYWG------ 321
Query: 252 SNLSRGRQQRVTLPVHYPGRVHRTNAIPAYPTRTSMDSHGNP 293
G Q + P PGR N A P D P
Sbjct: 322 ---EPGDVQEMPAPESPPGRDPAANLSLALPDDDGSDESSPP 360
>gi|21040269 ring finger protein 133 [Homo sapiens]
Length = 376
Score = 67.4 bits (163), Expect = 5e-11
Identities = 52/211 (24%), Positives = 91/211 (43%), Gaps = 22/211 (10%)
Query: 38 TVLGKAKRAVQRGATAVI-FDV-SENPEAIDQLNQGSEDPLKRPVVYVKGADAIKLMN-- 93
T K K A ++GA+ VI ++V + +Q ED + + +KG + L+
Sbjct: 111 TFTQKIKVATEKGASGVIIYNVPGTGNQVFPMFHQAFEDVVVVMIGNLKGTEIFHLIKKG 170
Query: 94 --IVNKQKVARARIQHRPPRQPTEYFDMGIFLAFFVVVSLVCLILLVKIKLKQRRSQNSM 151
I +V R I M +L FV+V+ L + + +
Sbjct: 171 VLITAVVEVGRKHI-----------IWMNHYLVSFVIVTTATLAYFIFYHIHRLCLARIQ 219
Query: 152 NRLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEELRVIPC 211
NR + ++ + + +EG D + + C IC E+Y + +R++ C
Sbjct: 220 NRRWQRLTTDLQNTFGQLQLRVVKEG-----DEEINPNGDSCVICFERYKPNDIVRILTC 274
Query: 212 THRFHRKCVDPWLLQHHTCPHCRHNIIEQKG 242
H FH+ C+DPW+L H TCP C+ +I++ G
Sbjct: 275 KHFFHKNCIDPWILPHGTCPICKCDILKVLG 305
>gi|57165361 ring finger protein 165 [Homo sapiens]
Length = 346
Score = 63.9 bits (154), Expect = 6e-10
Identities = 40/98 (40%), Positives = 50/98 (51%), Gaps = 4/98 (4%)
Query: 150 SMNRLAVQALEKMETRKFNSKSKGRR-EGSCGALDTLSSSSTSD-CAICLEKYIDGEELR 207
++ R AVQ +E F K K RR + G D S T + C ICL DGE++R
Sbjct: 251 NVTRGAVQ--NTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVR 308
Query: 208 VIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPS 245
+PC H FH+ CVD WL CP CR +I Q G S
Sbjct: 309 RLPCMHLFHQLCVDQWLAMSKKCPICRVDIETQLGADS 346
>gi|150170725 zinc and ring finger 4 [Homo sapiens]
Length = 429
Score = 63.2 bits (152), Expect = 1e-09
Identities = 21/47 (44%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
Query: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQ--HHTCPHCRHNI 237
CAICL++Y +G++L+++PC+H +H KC+DPW Q +CP C+ ++
Sbjct: 309 CAICLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSV 355
>gi|37675277 ring finger protein 148 [Homo sapiens]
Length = 305
Score = 63.2 bits (152), Expect = 1e-09
Identities = 51/211 (24%), Positives = 98/211 (46%), Gaps = 26/211 (12%)
Query: 38 TVLGKAKRAVQRGATAVIFDVSENP--EAIDQLNQGSEDPLKRPVVYVKGADAIKLMNIV 95
T K A ++GA VI + + +QG+E+ + + +KG +++++ +
Sbjct: 111 TFTHKINVAAEKGANGVIIYNYQGTGSKVFPMSHQGTENIVAVMISNLKG---MEILHSI 167
Query: 96 NKQKVARARIQ-HRPPRQPTEYFDMGIF------LAFFVVVSLVCLILLVKIKLKQRRSQ 148
K I+ R Q ++ M +F +A+F + + L V +RRSQ
Sbjct: 168 QKGVYVTVIIEVGRMHMQWVSHYIMYLFTFLAATIAYFYLDCVWRLTPRVPNSFTRRRSQ 227
Query: 149 NSMNRLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEELRV 208
+ +A+++++ R +EG D + +C +C + Y + +R+
Sbjct: 228 IKTD--VKKAIDQLQLRVL-------KEG-----DEELDLNEDNCVVCFDTYKPQDVVRI 273
Query: 209 IPCTHRFHRKCVDPWLLQHHTCPHCRHNIIE 239
+ C H FH+ C+DPWLL H TCP C+ +I++
Sbjct: 274 LTCKHFFHKACIDPWLLAHRTCPMCKCDILK 304
>gi|34452686 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 62.4 bits (150), Expect = 2e-09
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAV 247
C++C+ +Y +G +LR +PC+H +H C+D WL ++ TCP CR ++ S V
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV 624
>gi|34452684 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 62.4 bits (150), Expect = 2e-09
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAV 247
C++C+ +Y +G +LR +PC+H +H C+D WL ++ TCP CR ++ S V
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASGNRESVV 624
>gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo
sapiens]
Length = 183
Score = 62.0 bits (149), Expect = 2e-09
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 186 SSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCR 234
S +C ICL +++ G+ +R +PC H FH C+D WLL+ TCP+CR
Sbjct: 81 SEEEMPECVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTCPYCR 129
>gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo
sapiens]
Length = 183
Score = 62.0 bits (149), Expect = 2e-09
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 186 SSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCR 234
S +C ICL +++ G+ +R +PC H FH C+D WLL+ TCP+CR
Sbjct: 81 SEEEMPECVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTCPYCR 129
>gi|5174653 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 60.8 bits (146), Expect = 5e-09
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 183 DTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNII 238
+++ S C++C+ Y+ G +LR +PC H FH C+D WL ++ TCP CR ++
Sbjct: 622 NSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|34305295 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 60.8 bits (146), Expect = 5e-09
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 183 DTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNII 238
+++ S C++C+ Y+ G +LR +PC H FH C+D WL ++ TCP CR ++
Sbjct: 622 NSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|34305293 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 60.8 bits (146), Expect = 5e-09
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 183 DTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNII 238
+++ S C++C+ Y+ G +LR +PC H FH C+D WL ++ TCP CR ++
Sbjct: 622 NSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVL 677
>gi|33859668 Rabring 7 [Homo sapiens]
Length = 304
Score = 60.5 bits (145), Expect = 6e-09
Identities = 25/65 (38%), Positives = 35/65 (53%)
Query: 192 DCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGNPSAVCVET 251
+C +C E Y EE+R +PC H FH C+ PWL H TCP CR ++ + + E
Sbjct: 227 ECPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRKSLNGEDSTRQSQSTEA 286
Query: 252 SNLSR 256
S +R
Sbjct: 287 SASNR 291
>gi|7662244 DAZ interacting protein 3, zinc finger [Homo sapiens]
Length = 1208
Score = 60.1 bits (144), Expect = 8e-09
Identities = 26/56 (46%), Positives = 36/56 (64%), Gaps = 4/56 (7%)
Query: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNII---EQKGNPS 245
C IC E + E L V+PC H+FH +C+ PWL+Q TCP CR +++ E G+PS
Sbjct: 1148 CVICHEN-LSPENLSVLPCAHKFHAQCIRPWLMQQGTCPTCRLHVLLPEEFPGHPS 1202
>gi|37622894 ring finger protein 126 [Homo sapiens]
Length = 311
Score = 60.1 bits (144), Expect = 8e-09
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 192 DCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQ 240
+C +C + Y GE +R +PC H FH C+ PWL QH +CP CR ++ Q
Sbjct: 228 ECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQHDSCPVCRKSLTGQ 276
>gi|37595553 ring finger protein 111 [Homo sapiens]
Length = 986
Score = 58.9 bits (141), Expect = 2e-08
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 161 KMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCV 220
K + RK + K G EG+ + C ICL +GE++R +PC H FH+ CV
Sbjct: 910 KYKKRKLHCKQDGE-EGT-------EEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCV 961
Query: 221 DPWLLQHHTCPHCRHNIIEQ 240
D WL+ + CP CR +I Q
Sbjct: 962 DQWLITNKKCPICRVDIEAQ 981
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 57.4 bits (137), Expect = 5e-08
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 14/100 (14%)
Query: 140 IKLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEK 199
+ L +R + L +E++ + +FN + S + C +C+
Sbjct: 341 LNLAERLGEAKPRGLTKADIEQLPSYRFNPNNH--------------QSEQTLCVVCMCD 386
Query: 200 YIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIE 239
+ + LRV+PC H FH KCVD WL + TCP CR + E
Sbjct: 387 FESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 426
>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 57.4 bits (137), Expect = 5e-08
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 14/100 (14%)
Query: 140 IKLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEK 199
+ L +R + L +E++ + +FN + S + C +C+
Sbjct: 341 LNLAERLGEAKPRGLTKADIEQLPSYRFNPNNH--------------QSEQTLCVVCMCD 386
Query: 200 YIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIE 239
+ + LRV+PC H FH KCVD WL + TCP CR + E
Sbjct: 387 FESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 426
>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
Length = 465
Score = 57.4 bits (137), Expect = 5e-08
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 14/100 (14%)
Query: 140 IKLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEK 199
+ L +R + L +E++ + +FN + S + C +C+
Sbjct: 374 LNLAERLGEAKPRGLTKADIEQLPSYRFNPNNH--------------QSEQTLCVVCMCD 419
Query: 200 YIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIE 239
+ + LRV+PC H FH KCVD WL + TCP CR + E
Sbjct: 420 FESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 459
>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 57.4 bits (137), Expect = 5e-08
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 14/100 (14%)
Query: 140 IKLKQRRSQNSMNRLAVQALEKMETRKFNSKSKGRREGSCGALDTLSSSSTSDCAICLEK 199
+ L +R + L +E++ + +FN + S + C +C+
Sbjct: 341 LNLAERLGEAKPRGLTKADIEQLPSYRFNPNNH--------------QSEQTLCVVCMCD 386
Query: 200 YIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIE 239
+ + LRV+PC H FH KCVD WL + TCP CR + E
Sbjct: 387 FESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADASE 426
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,489,277
Number of Sequences: 37866
Number of extensions: 2434287
Number of successful extensions: 11984
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 389
Number of HSP's that attempted gapping in prelim test: 10880
Number of HSP's gapped (non-prelim): 1190
length of query: 836
length of database: 18,247,518
effective HSP length: 111
effective length of query: 725
effective length of database: 14,044,392
effective search space: 10182184200
effective search space used: 10182184200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.