Guide to the Human Genome
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Name: RNF215 Sequence: fasta or formatted (377aa) NCBI GI: 63025220
Description:

ring finger protein 215

Referenced in:

Ring Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.6         40           3
 C cysteine            2.9         11           1
 D aspartate           4.5         17           2
 E glutamate           4.2         16           1
 F phenylalanine       1.6          6           1
 G glycine             8.2         31           2
 H histidine           1.3          5           1
 I isoleucine          2.4          9           1
 K lysine              3.2         12           1
 L leucine            16.4         62           5
 M methionine          1.3          5           1
 N asparagine          2.4          9           1
 P proline             7.7         29           9
 Q glutamine           6.9         26           2
 R arginine            7.7         29           2
 S serine              5.0         19           2
 T threonine           2.9         11           2
 V valine              6.9         26           2
 W tryptophan          2.1          8           1
 Y tyrosine            1.6          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 215 
RNF43                 0.075   ring finger protein 43 
ZNRF3                 0.069   zinc and ring finger 3 
RNF149                0.066   ring finger protein 149 
RNF130                0.064   ring finger protein 130 
RNF150                0.060   ring finger protein 150 
RNF128                0.058   ring finger protein 128 isoform 1 
RNF128                0.058   ring finger protein 128 isoform 2 
RNF148                0.054   ring finger protein 148 
RNF133                0.053   ring finger protein 133 
RNF38                 0.050   ring finger protein 38 isoform 2 
RNF38                 0.050   ring finger protein 38 isoform 2 
RNF38                 0.050   ring finger protein 38 isoform 3 
RNF38                 0.050   ring finger protein 38 isoform 2 
RNF38                 0.050   ring finger protein 38 isoform 1 
RNF44                 0.050   ring finger protein 44 
RNF13                 0.049   ring finger protein 13 
RNF13                 0.049   ring finger protein 13 
RNF167                0.047   ring finger protein 167 
RLIM                  0.046   ring finger protein, LIM domain interacting 
RLIM                  0.046   ring finger protein, LIM domain interacting 
RNF24                 0.046   ring finger protein 24 isoform 2 
RNF24                 0.046   ring finger protein 24 isoform 1 
RNF24                 0.046   ring finger protein 24 isoform 1 
RNF6                  0.045   ring finger protein 6 
RNF6                  0.045   ring finger protein 6 
RNF6                  0.045   ring finger protein 6 
RNF122                0.045   ring finger protein 122 
DZIP3                 0.042   DAZ interacting protein 3, zinc finger 
ZNRF4                 0.041   zinc and ring finger 4 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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