Search of human proteins with 109891938

Search of human proteins with 109891938

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|109891938 disks large-associated protein 4 isoform c [Homo
sapiens]
         (285 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|109891938 disks large-associated protein 4 isoform c [Homo sa...   577   e-165
gi|34335251 disks large-associated protein 4 isoform b [Homo sap...   577   e-165
gi|34335253 disks large-associated protein 4 isoform a [Homo sap...   577   e-165
gi|38202224 discs large-associated protein 2 [Homo sapiens]           313   8e-86
gi|19923274 discs large homolog-associated protein 1 isoform alp...   309   2e-84
gi|51339031 discs large homolog-associated protein 1 isoform bet...   309   2e-84
gi|122937233 discs, large (Drosophila) homolog-associated protei...   261   6e-70
gi|226371669 discs large homolog 7 isoform b [Homo sapiens]            83   2e-16
gi|226371667 discs large homolog 7 isoform a [Homo sapiens]            83   2e-16
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa...    37   0.026
gi|23397642 GREB1 protein isoform a [Homo sapiens]                     35   0.075
gi|48255931 hepatoma-derived growth factor-related protein 2 iso...    35   0.075
gi|14249158 hepatoma-derived growth factor-related protein 2 iso...    35   0.075
gi|119395740 integrin alpha chain, alpha 6 isoform a precursor [...    35   0.098
gi|119395742 integrin alpha chain, alpha 6 isoform b precursor [...    35   0.098
gi|37595548 phosphoinositol 3-phosphate-binding protein-3 [Homo ...    35   0.098
gi|153792074 proline rich 12 [Homo sapiens]                            35   0.098
gi|55741677 SET domain containing 1A [Homo sapiens]                    34   0.17 
gi|28372497 ubiquitin protein ligase E3 component n-recognin 1 [...    34   0.17 
gi|33946313 ninein isoform 4 [Homo sapiens]                            34   0.17 
gi|33946321 ninein isoform 5 [Homo sapiens]                            34   0.17 
gi|148536871 ninein isoform 1 [Homo sapiens]                           34   0.17 
gi|148536869 ninein isoform 2 [Homo sapiens]                           34   0.17 
gi|154813191 IQ motif containing E isoform 1 [Homo sapiens]            34   0.17 
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ...    34   0.17 
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ...    34   0.17 
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ...    34   0.17 
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]         33   0.22 
gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens]         33   0.29 
gi|110349719 titin isoform N2-A [Homo sapiens]                         33   0.37 

>gi|109891938 disks large-associated protein 4 isoform c [Homo
           sapiens]
          Length = 285

 Score =  577 bits (1486), Expect = e-165
 Identities = 285/285 (100%), Positives = 285/285 (100%)

Query: 1   MSSRRDTDSDTQDANDSSCKSSERSLPDCTPHPNSISIDAGPRQAPKIAQIKRNLSYGDN 60
           MSSRRDTDSDTQDANDSSCKSSERSLPDCTPHPNSISIDAGPRQAPKIAQIKRNLSYGDN
Sbjct: 1   MSSRRDTDSDTQDANDSSCKSSERSLPDCTPHPNSISIDAGPRQAPKIAQIKRNLSYGDN 60

Query: 61  SDPALEASSLPPPDPWLETSSSSPAEPAQPGACRRDGYWFLKLLQAETERLEGWCCQMDK 120
           SDPALEASSLPPPDPWLETSSSSPAEPAQPGACRRDGYWFLKLLQAETERLEGWCCQMDK
Sbjct: 61  SDPALEASSLPPPDPWLETSSSSPAEPAQPGACRRDGYWFLKLLQAETERLEGWCCQMDK 120

Query: 121 ETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQNLNPDANPRPTAQDLAGFWDL 180
           ETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQNLNPDANPRPTAQDLAGFWDL
Sbjct: 121 ETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQNLNPDANPRPTAQDLAGFWDL 180

Query: 181 LQLSIEDISMKFDELYHLKANSWQLVETPEKRKEEKKPPPPVPKKPAKSKPAVSRDKASD 240
           LQLSIEDISMKFDELYHLKANSWQLVETPEKRKEEKKPPPPVPKKPAKSKPAVSRDKASD
Sbjct: 181 LQLSIEDISMKFDELYHLKANSWQLVETPEKRKEEKKPPPPVPKKPAKSKPAVSRDKASD 240

Query: 241 ASDKQRQEARKRLLAAKRAASVRQNSATESADSIEIYVPEAQTRL 285
           ASDKQRQEARKRLLAAKRAASVRQNSATESADSIEIYVPEAQTRL
Sbjct: 241 ASDKQRQEARKRLLAAKRAASVRQNSATESADSIEIYVPEAQTRL 285


>gi|34335251 disks large-associated protein 4 isoform b [Homo
           sapiens]
          Length = 453

 Score =  577 bits (1486), Expect = e-165
 Identities = 285/285 (100%), Positives = 285/285 (100%)

Query: 1   MSSRRDTDSDTQDANDSSCKSSERSLPDCTPHPNSISIDAGPRQAPKIAQIKRNLSYGDN 60
           MSSRRDTDSDTQDANDSSCKSSERSLPDCTPHPNSISIDAGPRQAPKIAQIKRNLSYGDN
Sbjct: 169 MSSRRDTDSDTQDANDSSCKSSERSLPDCTPHPNSISIDAGPRQAPKIAQIKRNLSYGDN 228

Query: 61  SDPALEASSLPPPDPWLETSSSSPAEPAQPGACRRDGYWFLKLLQAETERLEGWCCQMDK 120
           SDPALEASSLPPPDPWLETSSSSPAEPAQPGACRRDGYWFLKLLQAETERLEGWCCQMDK
Sbjct: 229 SDPALEASSLPPPDPWLETSSSSPAEPAQPGACRRDGYWFLKLLQAETERLEGWCCQMDK 288

Query: 121 ETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQNLNPDANPRPTAQDLAGFWDL 180
           ETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQNLNPDANPRPTAQDLAGFWDL
Sbjct: 289 ETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQNLNPDANPRPTAQDLAGFWDL 348

Query: 181 LQLSIEDISMKFDELYHLKANSWQLVETPEKRKEEKKPPPPVPKKPAKSKPAVSRDKASD 240
           LQLSIEDISMKFDELYHLKANSWQLVETPEKRKEEKKPPPPVPKKPAKSKPAVSRDKASD
Sbjct: 349 LQLSIEDISMKFDELYHLKANSWQLVETPEKRKEEKKPPPPVPKKPAKSKPAVSRDKASD 408

Query: 241 ASDKQRQEARKRLLAAKRAASVRQNSATESADSIEIYVPEAQTRL 285
           ASDKQRQEARKRLLAAKRAASVRQNSATESADSIEIYVPEAQTRL
Sbjct: 409 ASDKQRQEARKRLLAAKRAASVRQNSATESADSIEIYVPEAQTRL 453


>gi|34335253 disks large-associated protein 4 isoform a [Homo
           sapiens]
          Length = 989

 Score =  577 bits (1486), Expect = e-165
 Identities = 285/285 (100%), Positives = 285/285 (100%)

Query: 1   MSSRRDTDSDTQDANDSSCKSSERSLPDCTPHPNSISIDAGPRQAPKIAQIKRNLSYGDN 60
           MSSRRDTDSDTQDANDSSCKSSERSLPDCTPHPNSISIDAGPRQAPKIAQIKRNLSYGDN
Sbjct: 705 MSSRRDTDSDTQDANDSSCKSSERSLPDCTPHPNSISIDAGPRQAPKIAQIKRNLSYGDN 764

Query: 61  SDPALEASSLPPPDPWLETSSSSPAEPAQPGACRRDGYWFLKLLQAETERLEGWCCQMDK 120
           SDPALEASSLPPPDPWLETSSSSPAEPAQPGACRRDGYWFLKLLQAETERLEGWCCQMDK
Sbjct: 765 SDPALEASSLPPPDPWLETSSSSPAEPAQPGACRRDGYWFLKLLQAETERLEGWCCQMDK 824

Query: 121 ETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQNLNPDANPRPTAQDLAGFWDL 180
           ETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQNLNPDANPRPTAQDLAGFWDL
Sbjct: 825 ETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQNLNPDANPRPTAQDLAGFWDL 884

Query: 181 LQLSIEDISMKFDELYHLKANSWQLVETPEKRKEEKKPPPPVPKKPAKSKPAVSRDKASD 240
           LQLSIEDISMKFDELYHLKANSWQLVETPEKRKEEKKPPPPVPKKPAKSKPAVSRDKASD
Sbjct: 885 LQLSIEDISMKFDELYHLKANSWQLVETPEKRKEEKKPPPPVPKKPAKSKPAVSRDKASD 944

Query: 241 ASDKQRQEARKRLLAAKRAASVRQNSATESADSIEIYVPEAQTRL 285
           ASDKQRQEARKRLLAAKRAASVRQNSATESADSIEIYVPEAQTRL
Sbjct: 945 ASDKQRQEARKRLLAAKRAASVRQNSATESADSIEIYVPEAQTRL 989


>gi|38202224 discs large-associated protein 2 [Homo sapiens]
          Length = 975

 Score =  313 bits (803), Expect = 8e-86
 Identities = 150/230 (65%), Positives = 190/230 (82%), Gaps = 2/230 (0%)

Query: 56  SYGDNSDPALEASSLPPPDPWLETSSSSPAEPAQPGACRRDGYWFLKLLQAETERLEGWC 115
           SY ++    ++ S+LPPPDPWLE +  +  E  +   CRRDG WFLKLL AET+R+EGWC
Sbjct: 748 SYREDYRTQVDTSTLPPPDPWLEPAIDT-VETGRMSPCRRDGSWFLKLLHAETKRMEGWC 806

Query: 116 CQMDKETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQNLNPDANPRPTAQDLA 175
            +M++E +EN+LSEE+LGK+ SAVGSAQLLMSQKFQQF  LC+QN++P A PRPT+QDLA
Sbjct: 807 KEMEREAEENDLSEEILGKIRSAVGSAQLLMSQKFQQFYWLCQQNMDPSAMPRPTSQDLA 866

Query: 176 GFWDLLQLSIEDISMKFDELYHLKANSWQLVETPEKRKEEKKPPPPVPKKPAKSKPAVSR 235
           G+WD+LQLSIED+SMKFDEL  L+ N W+++E+PE RKEE+K PPP+PKKP K K  ++R
Sbjct: 867 GYWDMLQLSIEDVSMKFDELQRLRLNDWKMMESPE-RKEERKVPPPIPKKPPKGKFPITR 925

Query: 236 DKASDASDKQRQEARKRLLAAKRAASVRQNSATESADSIEIYVPEAQTRL 285
           +K+ D  D+QRQEAR+RL+AAKRAAS RQNSA+E ADSIEIY+PEAQTRL
Sbjct: 926 EKSLDLPDRQRQEARRRLMAAKRAASFRQNSASERADSIEIYIPEAQTRL 975



 Score = 28.1 bits (61), Expect = 9.2
 Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 3/60 (5%)

Query: 216 KKPPPPVPKKPAKSKP--AVSRDKASDASDKQRQEARKRLLAAKRAASVRQNSATESADS 273
           KK PPPVP +   SKP  +V+   +++++    Q++R + ++     S    ++T+S DS
Sbjct: 531 KKTPPPVPPR-TTSKPLISVTAQSSTESTQDAYQDSRAQRMSPWPQDSRGLYNSTDSLDS 589


>gi|19923274 discs large homolog-associated protein 1 isoform alpha
           [Homo sapiens]
          Length = 977

 Score =  309 bits (792), Expect = 2e-84
 Identities = 148/227 (65%), Positives = 189/227 (83%), Gaps = 4/227 (1%)

Query: 59  DNSDPALEASSLPPPDPWLETSSSSPAEPAQPGACRRDGYWFLKLLQAETERLEGWCCQM 118
           D+ D   + S LPPPDPW+++ +  P E  Q   C RDG+WFLKLLQAE +R+EGWC QM
Sbjct: 755 DDFDTDFDPSILPPPDPWIDSITEDPLEAVQRSVCHRDGHWFLKLLQAERDRMEGWCQQM 814

Query: 119 DKETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQNLNPDANPRPTAQDLAGFW 178
           ++E +ENNL E++LGK+ +AVGSAQLLM+QKF QFR LCE+NLNP+A+PRPT+QDLAGFW
Sbjct: 815 EREERENNLPEDILGKIRTAVGSAQLLMAQKFYQFRELCEENLNPNAHPRPTSQDLAGFW 874

Query: 179 DLLQLSIEDISMKFDELYHLKANSWQLVETPEKRKEEKKPPPPVPKKPAKSKPAVSRDKA 238
           D+LQLSIE+ISMKFDEL+ LKAN+W+ ++  +K+  E++ PPPVPKKPAK    + R+++
Sbjct: 875 DMLQLSIENISMKFDELHQLKANNWKQMDPLDKK--ERRAPPPVPKKPAKGPAPLIRERS 932

Query: 239 SDASDKQRQEARKRLLAAKRAASVRQNSATESADSIEIYVPEAQTRL 285
            ++S  QRQEARKRL+AAKRAASVRQNSATESA+SIEIY+PEAQTRL
Sbjct: 933 LESS--QRQEARKRLMAAKRAASVRQNSATESAESIEIYIPEAQTRL 977


>gi|51339031 discs large homolog-associated protein 1 isoform beta
           [Homo sapiens]
          Length = 675

 Score =  309 bits (792), Expect = 2e-84
 Identities = 148/227 (65%), Positives = 189/227 (83%), Gaps = 4/227 (1%)

Query: 59  DNSDPALEASSLPPPDPWLETSSSSPAEPAQPGACRRDGYWFLKLLQAETERLEGWCCQM 118
           D+ D   + S LPPPDPW+++ +  P E  Q   C RDG+WFLKLLQAE +R+EGWC QM
Sbjct: 453 DDFDTDFDPSILPPPDPWIDSITEDPLEAVQRSVCHRDGHWFLKLLQAERDRMEGWCQQM 512

Query: 119 DKETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQNLNPDANPRPTAQDLAGFW 178
           ++E +ENNL E++LGK+ +AVGSAQLLM+QKF QFR LCE+NLNP+A+PRPT+QDLAGFW
Sbjct: 513 EREERENNLPEDILGKIRTAVGSAQLLMAQKFYQFRELCEENLNPNAHPRPTSQDLAGFW 572

Query: 179 DLLQLSIEDISMKFDELYHLKANSWQLVETPEKRKEEKKPPPPVPKKPAKSKPAVSRDKA 238
           D+LQLSIE+ISMKFDEL+ LKAN+W+ ++  +K+  E++ PPPVPKKPAK    + R+++
Sbjct: 573 DMLQLSIENISMKFDELHQLKANNWKQMDPLDKK--ERRAPPPVPKKPAKGPAPLIRERS 630

Query: 239 SDASDKQRQEARKRLLAAKRAASVRQNSATESADSIEIYVPEAQTRL 285
            ++S  QRQEARKRL+AAKRAASVRQNSATESA+SIEIY+PEAQTRL
Sbjct: 631 LESS--QRQEARKRLMAAKRAASVRQNSATESAESIEIYIPEAQTRL 675


>gi|122937233 discs, large (Drosophila) homolog-associated protein 3
           [Homo sapiens]
          Length = 979

 Score =  261 bits (666), Expect = 6e-70
 Identities = 134/234 (57%), Positives = 169/234 (72%), Gaps = 15/234 (6%)

Query: 63  PALEASSLPPPDP-----------WLETSSSSPAEPAQPGACRRDGYWFLKLLQAETERL 111
           PA + S  P P P           W+E  S S  +  +   C RDG WF+K+L+AE E+L
Sbjct: 750 PATDGSPGPAPAPTPGPGAGRRDSWIERGSRSLPDSGRASPCPRDGEWFIKMLRAEVEKL 809

Query: 112 EGWCCQMDKETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQNLNPDANPRPTA 171
           E WC QM++E ++  L EE+L K+ SAVGS QLL+SQK QQF  LC+Q+++P A P PT 
Sbjct: 810 EHWCQQMEREAEDYELPEEILEKIRSAVGSTQLLLSQKVQQFFRLCQQSMDPTAFPVPTF 869

Query: 172 QDLAGFWDLLQLSIEDISMKFDELYHLKANSWQLVETPEKRKEEKKPPPPVPKKPAKSKP 231
           QDLAGFWDLLQLSIED+++KF EL  LKANSW+L+E     KEEKK PPP+PKKP + + 
Sbjct: 870 QDLAGFWDLLQLSIEDVTLKFLELQQLKANSWKLLEP----KEEKKVPPPIPKKPLRGRG 925

Query: 232 AVSRDKASDASDKQRQEARKRLLAAKRAASVRQNSATESADSIEIYVPEAQTRL 285
              ++++ D+ D+QRQEARKRLLAAKRAAS R +SATESADSIEIY+PEAQTRL
Sbjct: 926 VPVKERSLDSVDRQRQEARKRLLAAKRAASFRHSSATESADSIEIYIPEAQTRL 979


>gi|226371669 discs large homolog 7 isoform b [Homo sapiens]
          Length = 842

 Score = 83.2 bits (204), Expect = 2e-16
 Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 12/178 (6%)

Query: 99  WFLKLLQAETERLEGWCCQMDKETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCE 158
           +F  +LQ+ETE+L   C + D++  E ++ ++    + +AVG  +LLM ++F+QF GL +
Sbjct: 432 YFRNILQSETEKLTSHCFEWDRKL-ELDIPDDAKDLIRTAVGQTRLLMKERFKQFEGLVD 490

Query: 159 QNLNPDANPRPTAQDLAGFWDLLQLSIEDISMKFDELYHLKANSWQLVETPEKRKEEKKP 218
                      T  DL GFWD++   IED+  KF+ L  L+ + WQ+         +   
Sbjct: 491 DCEYKRGIKETTCTDLDGFWDMVSFQIEDVIHKFNNLIKLEESGWQVNNNMNHNMNKN-- 548

Query: 219 PPPVPKKPAKSKPAVSRDKASDASDKQRQEARKRLLAAKRA--ASVRQNSATESADSI 274
              V +K   S  A S+ K  DA    R  AR RL A K A    +RQ    E+A S+
Sbjct: 549 ---VFRKKVVSGIA-SKPKQDDAG---RIAARNRLAAIKNAMRERIRQEECAETAVSV 599


>gi|226371667 discs large homolog 7 isoform a [Homo sapiens]
          Length = 846

 Score = 83.2 bits (204), Expect = 2e-16
 Identities = 58/178 (32%), Positives = 89/178 (50%), Gaps = 12/178 (6%)

Query: 99  WFLKLLQAETERLEGWCCQMDKETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCE 158
           +F  +LQ+ETE+L   C + D++  E ++ ++    + +AVG  +LLM ++F+QF GL +
Sbjct: 432 YFRNILQSETEKLTSHCFEWDRKL-ELDIPDDAKDLIRTAVGQTRLLMKERFKQFEGLVD 490

Query: 159 QNLNPDANPRPTAQDLAGFWDLLQLSIEDISMKFDELYHLKANSWQLVETPEKRKEEKKP 218
                      T  DL GFWD++   IED+  KF+ L  L+ + WQ+         +   
Sbjct: 491 DCEYKRGIKETTCTDLDGFWDMVSFQIEDVIHKFNNLIKLEESGWQVNNNMNHNMNKN-- 548

Query: 219 PPPVPKKPAKSKPAVSRDKASDASDKQRQEARKRLLAAKRA--ASVRQNSATESADSI 274
              V +K   S  A S+ K  DA    R  AR RL A K A    +RQ    E+A S+
Sbjct: 549 ---VFRKKVVSGIA-SKPKQDDAG---RIAARNRLAAIKNAMRERIRQEECAETAVSV 599


>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
           sapiens]
          Length = 699

 Score = 36.6 bits (83), Expect = 0.026
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)

Query: 207 ETPEKRKEEKKPPPPVPKKPAKSKPAVSRDKASDASDKQRQEARKRLLAAKRAASVRQNS 266
           E  EK K +  P P  PK    S       KA+  S+++ +E +K  +   ++ S+++  
Sbjct: 528 EEEEKLKGKGSPRPQAPKANGTSALTAQNGKAAKNSEEEEEEKKKAAVVVSKSGSLKKRK 587

Query: 267 ATESADSIEIYVPEAQ 282
             E+A   E   P+A+
Sbjct: 588 QNEAAKEAE--TPQAK 601



 Score = 33.9 bits (76), Expect = 0.17
 Identities = 18/65 (27%), Positives = 31/65 (47%)

Query: 207 ETPEKRKEEKKPPPPVPKKPAKSKPAVSRDKASDASDKQRQEARKRLLAAKRAASVRQNS 266
           E+    +EEKKPP       A +KP  ++  A  +SD    ++ +   A  + A   +NS
Sbjct: 328 ESDSSSEEEKKPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSEDDEAPSKPAGTTKNS 387

Query: 267 ATESA 271
           + + A
Sbjct: 388 SNKPA 392



 Score = 28.1 bits (61), Expect = 9.2
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 211 KRKEEKKPPPPVPKKPAKSKPAVSRDKASDASDKQRQEARKRL 253
           K+K +K      P KPA +K   +    S +SD   +E  ++L
Sbjct: 491 KKKPQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEKL 533


>gi|23397642 GREB1 protein isoform a [Homo sapiens]
          Length = 1949

 Score = 35.0 bits (79), Expect = 0.075
 Identities = 24/109 (22%), Positives = 51/109 (46%), Gaps = 7/109 (6%)

Query: 126 NLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQNLNPDANPRPTAQDLAGFWDLLQLSI 185
           NL++ V+  +L         +S+ ++Q+     Q ++ +       Q L   + L+QL+ 
Sbjct: 397 NLNDVVVSPLLYTCYQNSQSVSRAYEQYGASAIQPISEEM------QLLLTVYYLVQLAA 450

Query: 186 EDISMKFDELYHLKANSWQLVETPEKRKEEKKPPPPVPKKPAKSKPAVS 234
           + + +  ++L  +   SW+     E R+ ++ PP P P  P+ + P  S
Sbjct: 451 DQVPL-MEDLEQIFLRSWRESHLTEIRQYQQAPPQPFPPAPSAAAPVTS 498


>gi|48255931 hepatoma-derived growth factor-related protein 2
           isoform 1 [Homo sapiens]
          Length = 671

 Score = 35.0 bits (79), Expect = 0.075
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 8/58 (13%)

Query: 209 PEKRKEEKKP-PPPVPKKPAKSKPAVSRDKASDASD-------KQRQEARKRLLAAKR 258
           P  RK  +KP P P  +KP   +P  S    SD+ +       K+R EAR+R L A+R
Sbjct: 274 PRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARR 331


>gi|14249158 hepatoma-derived growth factor-related protein 2
           isoform 2 [Homo sapiens]
          Length = 670

 Score = 35.0 bits (79), Expect = 0.075
 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 8/58 (13%)

Query: 209 PEKRKEEKKP-PPPVPKKPAKSKPAVSRDKASDASD-------KQRQEARKRLLAAKR 258
           P  RK  +KP P P  +KP   +P  S    SD+ +       K+R EAR+R L A+R
Sbjct: 274 PRGRKPAEKPLPKPRGRKPKPERPPSSSSSDSDSDEVDRISEWKRRDEARRRELEARR 331


>gi|119395740 integrin alpha chain, alpha 6 isoform a precursor
           [Homo sapiens]
          Length = 1091

 Score = 34.7 bits (78), Expect = 0.098
 Identities = 21/71 (29%), Positives = 33/71 (46%)

Query: 96  DGYWFLKLLQAETERLEGWCCQMDKETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRG 155
           +G W L L++ E++ LE   C+  KE    NL+E    +    +   Q+  ++KF  F  
Sbjct: 861 NGKWLLYLVKVESKGLEKVTCEPQKEINSLNLTESHNSRKKREITEKQIDDNRKFSLFAE 920

Query: 156 LCEQNLNPDAN 166
              Q LN   N
Sbjct: 921 RKYQTLNCSVN 931


>gi|119395742 integrin alpha chain, alpha 6 isoform b precursor
           [Homo sapiens]
          Length = 1073

 Score = 34.7 bits (78), Expect = 0.098
 Identities = 21/71 (29%), Positives = 33/71 (46%)

Query: 96  DGYWFLKLLQAETERLEGWCCQMDKETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRG 155
           +G W L L++ E++ LE   C+  KE    NL+E    +    +   Q+  ++KF  F  
Sbjct: 861 NGKWLLYLVKVESKGLEKVTCEPQKEINSLNLTESHNSRKKREITEKQIDDNRKFSLFAE 920

Query: 156 LCEQNLNPDAN 166
              Q LN   N
Sbjct: 921 RKYQTLNCSVN 931


>gi|37595548 phosphoinositol 3-phosphate-binding protein-3 [Homo
           sapiens]
          Length = 1048

 Score = 34.7 bits (78), Expect = 0.098
 Identities = 36/142 (25%), Positives = 56/142 (39%), Gaps = 14/142 (9%)

Query: 21  SSERSLPDCTPHPNSISIDAGPRQAPKIAQIKRNLSYGDNSDPALEASSLPP------PD 74
           ++  SL   +  P S S+   P Q        R   Y     P+     LPP       D
Sbjct: 439 AASSSLRRLSLQPRSHSVPRSPSQG----SYSRARIYSPVRSPSARFERLPPRSEDIYAD 494

Query: 75  PW---LETSSSSPAEPAQPGACRRDGYWFLKLLQAETERLEGWCCQMDKETKENNLSEEV 131
           P    +  S SSP  P  P   R D     KL + +T++L G  C+ +K  +E +   + 
Sbjct: 495 PAAYVMRRSISSPKVPPYPEVFR-DSLHTYKLNEQDTDKLLGKLCEQNKVVREQDRLVQQ 553

Query: 132 LGKVLSAVGSAQLLMSQKFQQF 153
           L     ++ SA +   Q+ + F
Sbjct: 554 LRAEKESLESALMGTHQELEMF 575


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 34.7 bits (78), Expect = 0.098
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 15/73 (20%)

Query: 207  ETPEKRKEEKKPP---------PPVPKKPAKSKPAVSRDKASDASDKQRQEARKRLLAAK 257
            ETPEK   EK P          PP P+KP+  +P V ++K     +K++    +R L  +
Sbjct: 1704 ETPEKTTSEKPPEQTPETAMPEPPAPEKPSLLRP-VEKEK-----EKEKVTRGERPLRGE 1757

Query: 258  RAASVRQNSATES 270
            RA S RQ     S
Sbjct: 1758 RATSGRQTRPERS 1770


>gi|55741677 SET domain containing 1A [Homo sapiens]
          Length = 1707

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 9/97 (9%)

Query: 2    SSRRDTDSDTQDANDSSCKSSER-----SLPDCTPHPNSISIDAGPRQAPKIAQIKRNLS 56
            SS   + S +  +++SS +  E      +LP  +P P  + +   P  AP    +   ++
Sbjct: 1045 SSSSSSSSSSSSSSESSSEDEEEEERPAALPSASPPPREVPV---PTPAPVEVPVPERVA 1101

Query: 57   YGDNSD-PALEASSLPPPDPWLETSSSSPAEPAQPGA 92
                +  P  EAS   P  P  E+  S+P  P +P A
Sbjct: 1102 GSPVTPLPEQEASPARPAGPTEESPPSAPLRPPEPPA 1138


>gi|28372497 ubiquitin protein ligase E3 component n-recognin 1
           [Homo sapiens]
          Length = 1749

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)

Query: 176 GFWDLLQLSIEDISMKF---DELYHLKANSWQLVETPEKRKEEKKPPPPVPK-KPAKSK 230
           G ++L   S++D +M F    +  H KA   Q     ++ K+E  PPPP P+  PA SK
Sbjct: 819 GVYELKDESLKDFNMYFYHYSKTQHSKAEHMQKKRRKQENKDEALPPPPPPEFCPAFSK 877


>gi|33946313 ninein isoform 4 [Homo sapiens]
          Length = 2096

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 37/185 (20%), Positives = 77/185 (41%), Gaps = 14/185 (7%)

Query: 103  LLQAETERLEGWCCQMDKETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQNLN 162
            L + + E    W  + D+ T+E   ++E+L + L    +  L+++Q+ +      +++LN
Sbjct: 853  LQEQQREEKSQWEFEKDELTQECAEAQELLKETLKREKTTSLVLTQEREMLEKTYKEHLN 912

Query: 163  PDANPRPTAQDLAGFWDLLQLSIEDISMKFDELYHLKANSWQLVETPEKRKEEKKPPPPV 222
                 R   Q L    DL  +S    S+  D++  LK++           K E +    V
Sbjct: 913  SMVVER--QQLLQDLEDLRNVSETQQSLLSDQILELKSS----------HKRELREREEV 960

Query: 223  PKKPAKSKPAVSR--DKASDASDKQRQEARKRLLAAKRAASVRQNSATESADSIEIYVPE 280
              +   S+   S+  ++     D++RQE   +LLA +        +A      +   +  
Sbjct: 961  LCQAGASEQLASQRLERLEMEHDQERQEMMSKLLAMENIHKATCETADRERAEMSTEISR 1020

Query: 281  AQTRL 285
             Q+++
Sbjct: 1021 LQSKI 1025


>gi|33946321 ninein isoform 5 [Homo sapiens]
          Length = 2090

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 37/185 (20%), Positives = 77/185 (41%), Gaps = 14/185 (7%)

Query: 103  LLQAETERLEGWCCQMDKETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQNLN 162
            L + + E    W  + D+ T+E   ++E+L + L    +  L+++Q+ +      +++LN
Sbjct: 847  LQEQQREEKSQWEFEKDELTQECAEAQELLKETLKREKTTSLVLTQEREMLEKTYKEHLN 906

Query: 163  PDANPRPTAQDLAGFWDLLQLSIEDISMKFDELYHLKANSWQLVETPEKRKEEKKPPPPV 222
                 R   Q L    DL  +S    S+  D++  LK++           K E +    V
Sbjct: 907  SMVVER--QQLLQDLEDLRNVSETQQSLLSDQILELKSS----------HKRELREREEV 954

Query: 223  PKKPAKSKPAVSR--DKASDASDKQRQEARKRLLAAKRAASVRQNSATESADSIEIYVPE 280
              +   S+   S+  ++     D++RQE   +LLA +        +A      +   +  
Sbjct: 955  LCQAGASEQLASQRLERLEMEHDQERQEMMSKLLAMENIHKATCETADRERAEMSTEISR 1014

Query: 281  AQTRL 285
             Q+++
Sbjct: 1015 LQSKI 1019


>gi|148536871 ninein isoform 1 [Homo sapiens]
          Length = 2046

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 37/185 (20%), Positives = 77/185 (41%), Gaps = 14/185 (7%)

Query: 103  LLQAETERLEGWCCQMDKETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQNLN 162
            L + + E    W  + D+ T+E   ++E+L + L    +  L+++Q+ +      +++LN
Sbjct: 847  LQEQQREEKSQWEFEKDELTQECAEAQELLKETLKREKTTSLVLTQEREMLEKTYKEHLN 906

Query: 163  PDANPRPTAQDLAGFWDLLQLSIEDISMKFDELYHLKANSWQLVETPEKRKEEKKPPPPV 222
                 R   Q L    DL  +S    S+  D++  LK++           K E +    V
Sbjct: 907  SMVVER--QQLLQDLEDLRNVSETQQSLLSDQILELKSS----------HKRELREREEV 954

Query: 223  PKKPAKSKPAVSR--DKASDASDKQRQEARKRLLAAKRAASVRQNSATESADSIEIYVPE 280
              +   S+   S+  ++     D++RQE   +LLA +        +A      +   +  
Sbjct: 955  LCQAGASEQLASQRLERLEMEHDQERQEMMSKLLAMENIHKATCETADRERAEMSTEISR 1014

Query: 281  AQTRL 285
             Q+++
Sbjct: 1015 LQSKI 1019


>gi|148536869 ninein isoform 2 [Homo sapiens]
          Length = 2133

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 37/185 (20%), Positives = 77/185 (41%), Gaps = 14/185 (7%)

Query: 103  LLQAETERLEGWCCQMDKETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQNLN 162
            L + + E    W  + D+ T+E   ++E+L + L    +  L+++Q+ +      +++LN
Sbjct: 847  LQEQQREEKSQWEFEKDELTQECAEAQELLKETLKREKTTSLVLTQEREMLEKTYKEHLN 906

Query: 163  PDANPRPTAQDLAGFWDLLQLSIEDISMKFDELYHLKANSWQLVETPEKRKEEKKPPPPV 222
                 R   Q L    DL  +S    S+  D++  LK++           K E +    V
Sbjct: 907  SMVVER--QQLLQDLEDLRNVSETQQSLLSDQILELKSS----------HKRELREREEV 954

Query: 223  PKKPAKSKPAVSR--DKASDASDKQRQEARKRLLAAKRAASVRQNSATESADSIEIYVPE 280
              +   S+   S+  ++     D++RQE   +LLA +        +A      +   +  
Sbjct: 955  LCQAGASEQLASQRLERLEMEHDQERQEMMSKLLAMENIHKATCETADRERAEMSTEISR 1014

Query: 281  AQTRL 285
             Q+++
Sbjct: 1015 LQSKI 1019


>gi|154813191 IQ motif containing E isoform 1 [Homo sapiens]
          Length = 695

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 16/26 (61%), Positives = 16/26 (61%)

Query: 206 VETPEKRKEEKKPPPPVPKKPAKSKP 231
           VET  KRK   KPPP  PK P  SKP
Sbjct: 26  VETKAKRKAFHKPPPTSPKSPYLSKP 51



 Score = 32.0 bits (71), Expect = 0.64
 Identities = 62/273 (22%), Positives = 100/273 (36%), Gaps = 42/273 (15%)

Query: 5   RDTDSDTQDANDSSCKSSERSLPDCTPHPNSISIDAGPRQAPKIAQIKRNLSYGDNSDPA 64
           + T +  Q    S+  S  RS+ + T    S+  D   R       I +   Y + S P 
Sbjct: 280 KKTGAKRQKKMGSALLSLSRSVQELTEENQSLKEDLD-RVLSTSPTISKTQGYVEWSKPR 338

Query: 65  L--EASSLPPPDPWLETSSSSPAEPAQ--PGACRRDGYWFLKLLQAET----ERLEGWCC 116
           L      L      +E+S S  AEP +  P AC        +  + +     ERL G   
Sbjct: 339 LLRRIVELEKKLSVMESSKSHAAEPVRSHPPACLASSSALHRQPRGDRNKDHERLRG--A 396

Query: 117 QMDKETKENNLSEEVLGKVLSAVGSAQLLMSQKFQQFRGLCEQNLNPDANPRPTAQDLAG 176
             D + +   L E++L + L      QLL ++   +    C +    +   R        
Sbjct: 397 VRDLKEERTALQEQLLQRDLEV---KQLLQAKADLEKELECAREGEEERRERE------- 446

Query: 177 FWDLLQLSIEDISMKFDELYHLKANSWQLVETPEKRKEEKKPPPPVPKK------PAKSK 230
             ++L+  I+ ++ K  EL  +K             KEEK+  P VP K      P  S 
Sbjct: 447 --EVLREEIQTLTSKLQELQEMK-------------KEEKEDCPEVPHKAQELPAPTPSS 491

Query: 231 PAVSRDKASDASDKQRQEARKRLLAAKRAASVR 263
               +D   D+S++     R      +R A+ R
Sbjct: 492 RHCEQDWPPDSSEEGLPRPRSPCSDGRRDAAAR 524


>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
           [Homo sapiens]
          Length = 2191

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 4/92 (4%)

Query: 1   MSSRRDTDSDTQDANDSSCKSSERSLPDCTPHPNSISIDAGPRQAPKIAQIKRNLSYGDN 60
           +SS       T    D S  +     P  +PH +SI    GP  +P  + +  N S    
Sbjct: 638 LSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIP--GGPSPSPVGSPVGSNQSRSGP 695

Query: 61  SDPA-LEASSLPPPDPWLETSSSS-PAEPAQP 90
             PA +  S +PP  P  ++ SSS PA    P
Sbjct: 696 ISPASIPGSQMPPQPPGSQSESSSHPALSQSP 727


>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
           [Homo sapiens]
          Length = 2231

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 4/92 (4%)

Query: 1   MSSRRDTDSDTQDANDSSCKSSERSLPDCTPHPNSISIDAGPRQAPKIAQIKRNLSYGDN 60
           +SS       T    D S  +     P  +PH +SI    GP  +P  + +  N S    
Sbjct: 625 LSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIP--GGPSPSPVGSPVGSNQSRSGP 682

Query: 61  SDPA-LEASSLPPPDPWLETSSSS-PAEPAQP 90
             PA +  S +PP  P  ++ SSS PA    P
Sbjct: 683 ISPASIPGSQMPPQPPGSQSESSSHPALSQSP 714


>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
           [Homo sapiens]
          Length = 2178

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 27/92 (29%), Positives = 38/92 (41%), Gaps = 4/92 (4%)

Query: 1   MSSRRDTDSDTQDANDSSCKSSERSLPDCTPHPNSISIDAGPRQAPKIAQIKRNLSYGDN 60
           +SS       T    D S  +     P  +PH +SI    GP  +P  + +  N S    
Sbjct: 625 LSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIP--GGPSPSPVGSPVGSNQSRSGP 682

Query: 61  SDPA-LEASSLPPPDPWLETSSSS-PAEPAQP 90
             PA +  S +PP  P  ++ SSS PA    P
Sbjct: 683 ISPASIPGSQMPPQPPGSQSESSSHPALSQSP 714


>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
          Length = 2968

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 30/95 (31%), Positives = 41/95 (43%), Gaps = 10/95 (10%)

Query: 2    SSRRDTDSDTQDANDSSCKSSERSLPDCTPHPNSISIDAGPRQAPKIAQIKRNLSYGDNS 61
            SS   + S T D  DSSC S + + P  T  P++ +  A P +A K A   R  ++    
Sbjct: 2663 SSSSSSSSSTTD-EDSSCSSDDEAAPAPTAGPSAQA--ALPTKATKQAGKARPSAHSPGK 2719

Query: 62   DPALEASSLPPPDPWLETSSSSPAEP-AQPGACRR 95
                     PPP P      + P +P AQ GA  R
Sbjct: 2720 KTPAPQPQAPPPQP------TQPLQPKAQAGAKSR 2748


>gi|126362967 Nck-associated protein 5 isoform 1 [Homo sapiens]
          Length = 1909

 Score = 33.1 bits (74), Expect = 0.29
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 18/89 (20%)

Query: 12   QDANDSSCKSS---ERSLPDCTPHPNSISIDAGPRQAPKIAQIKRNLSYGDNSDPALEAS 68
            +D+ + + KSS    +S P+ + +P S+ I AG          +RN++  D+      A 
Sbjct: 1172 KDSLNEASKSSVAVNKSKPEDSKNPASMEITAG----------ERNVTLPDSQAQGSLAD 1221

Query: 69   SLPPPDPWLETSSSSPAEPAQPGACRRDG 97
             LP     LET+   P E + PG+  RDG
Sbjct: 1222 GLP-----LETALQEPLESSIPGSDGRDG 1245


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 32.7 bits (73), Expect = 0.37
 Identities = 22/79 (27%), Positives = 37/79 (46%), Gaps = 5/79 (6%)

Query: 207  ETPEKRKEEKKPPPP-VPKKPAKSKPAVSRDKASDASDKQRQEARKRLLAAKRAASVRQN 265
            + P K  E+K PPPP V KKP   K     +K S   ++++ +  K    +K+    + +
Sbjct: 9164 KVPAKVPEKKAPPPPKVIKKPVIEK----IEKTSRRMEEEKVQVTKVPEVSKKIVPQKPS 9219

Query: 266  SATESADSIEIYVPEAQTR 284
                  + IE+ VP   T+
Sbjct: 9220 RTPVQEEVIEVKVPAVHTK 9238



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 15/39 (38%), Positives = 19/39 (48%)

Query: 207  ETPEKRKEEKKPPPPVPKKPAKSKPAVSRDKASDASDKQ 245
            E P+K   EKK P PVPKK     P V  +      +K+
Sbjct: 9582 EAPKKIVPEKKVPAPVPKKEKVPPPKVPEEPKKPVPEKK 9620



 Score = 29.3 bits (64), Expect = 4.1
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 10/62 (16%)

Query: 207  ETPEKRK------EEKKPPPPVPKKPAKSKP----AVSRDKASDASDKQRQEARKRLLAA 256
            + PE+RK      EE  PPP VP  P K  P    AV    A  A   + + ++K ++  
Sbjct: 9406 KVPEERKPVPRKEEEVPPPPKVPALPKKPVPEEKVAVPVPVAKKAPPPRAEVSKKTVVEE 9465

Query: 257  KR 258
            KR
Sbjct: 9466 KR 9467



 Score = 28.9 bits (63), Expect = 5.4
 Identities = 13/27 (48%), Positives = 16/27 (59%)

Query: 207  ETPEKRKEEKKPPPPVPKKPAKSKPAV 233
            E P+K   E+K P PVPKK   + P V
Sbjct: 9318 EVPKKPVPEEKKPVPVPKKEPAAPPKV 9344



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 207   ETPEKRKEEKKPPPPVPKKPAKSKPAVSRDK 237
             E P+K   E+K P PVPKK     P V + +
Sbjct: 10062 EVPKKLIPEEKKPTPVPKKVEAPPPKVPKKR 10092



 Score = 28.5 bits (62), Expect = 7.0
 Identities = 20/85 (23%), Positives = 33/85 (38%), Gaps = 4/85 (4%)

Query: 184   SIEDISMKFDELYHLKANSWQLVETPEKRKEEKKPPPPVPKKP----AKSKPAVSRDKAS 239
             + + I  K  ++   K +  +  E+   RK E K P P+  KP          VS D  +
Sbjct: 32810 AFKSIHEKVSKISETKKSDQKTTESTVTRKTEPKAPEPISSKPVIVTGLQDTTVSSDSVA 32869

Query: 240   DASDKQRQEARKRLLAAKRAASVRQ 264
               + K   E R   +  K   ++ Q
Sbjct: 32870 KFAVKATGEPRPTAIWTKDGKAITQ 32894


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.309    0.125    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,732,900
Number of Sequences: 37866
Number of extensions: 650169
Number of successful extensions: 6312
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 151
Number of HSP's that attempted gapping in prelim test: 5713
Number of HSP's gapped (non-prelim): 687
length of query: 285
length of database: 18,247,518
effective HSP length: 101
effective length of query: 184
effective length of database: 14,423,052
effective search space: 2653841568
effective search space used: 2653841568
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.