Guide to the Human Genome
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Name: HEATR6 Sequence: fasta or formatted (1181aa) NCBI GI: 109715835
Description:

HEAT repeat containing 6

Referenced in:

Mammary Tissues

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.8        104           3
 C cysteine            2.5         30           1
 D aspartate           4.1         48           2
 E glutamate           5.6         66           4
 F phenylalanine       2.7         32           1
 G glycine             5.5         65           2
 H histidine           1.9         22           2
 I isoleucine          4.4         52           2
 K lysine              5.2         61           4
 L leucine            13.1        155           4
 M methionine          2.6         31           2
 N asparagine          3.5         41           1
 P proline             5.8         69           2
 Q glutamine           5.3         63           2
 R arginine            4.1         49           2
 S serine             10.8        127           4
 T threonine           4.7         56           1
 V valine              6.1         72           2
 W tryptophan          1.2         14           2
 Y tyrosine            2.0         24           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HEAT repeat containing 6 
UNC45A                0.006   smooth muscle cell associated protein-1 isoform 3 [H...
UNC45A                0.006   smooth muscle cell associated protein-1 isoform 2 [H...
SRRM2                 0.006   splicing coactivator subunit SRm300 
TNRC18                0.005   trinucleotide repeat containing 18 
MLLT1                 0.005   myeloid/lymphoid or mixed-lineage leukemia (trithora...
AFF3                  0.004   AF4/FMR2 family, member 3 isoform 2 
AFF3                  0.004   AF4/FMR2 family, member 3 isoform 1 
SEC31B                0.004   SEC31 homolog B 
SETD1A                0.004   SET domain containing 1A 
RANBP6                0.004   RAN binding protein 6 
HEATR5B               0.004   HEAT repeat containing 5B 
TMEM131               0.004   RW1 protein 
AP2A1                 0.003   adaptor-related protein complex 2, alpha 1 subunit i...
AP2A1                 0.003   adaptor-related protein complex 2, alpha 1 subunit i...
CENPT                 0.003   centromere protein T 
MLNR                  0.003   motilin receptor 
PCF11                 0.003   pre-mRNA cleavage complex II protein Pcf11 
AP3B1                 0.003   adaptor-related protein complex 3, beta 1 subunit [H...
PPP1R9B               0.003   protein phosphatase 1, regulatory subunit 9B 
KPNA5                 0.003   karyopherin alpha 5 
CHD9                  0.003   chromodomain helicase DNA binding protein 9 
RFC1                  0.003   replication factor C large subunit 
KPNA6                 0.003   karyopherin alpha 6 
DDX24                 0.003   DEAD (Asp-Glu-Ala-Asp) box polypeptide 24 
KPNA1                 0.003   karyopherin alpha 1 
AP3B2                 0.003   adaptor-related protein complex 3, beta 2 subunit [H...
HIVEP3                0.003   human immunodeficiency virus type I enhancer bindin...
HIVEP3                0.003   human immunodeficiency virus type I enhancer bindin...
AFF1                  0.003   myeloid/lymphoid or mixed-lineage leukemia trithorax ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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