Search of human proteins with 149944590

Search of human proteins with 149944590

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|149944590 SRR1 domain containing [Homo sapiens]
         (339 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|149944590 SRR1 domain containing [Homo sapiens]                    689   0.0  
gi|239756790 PREDICTED: similar to hCG1991532 [Homo sapiens]           39   0.009
gi|239745813 PREDICTED: hypothetical protein XP_002343595 [Homo ...    36   0.056
gi|146219841 PNMA-like 2 [Homo sapiens]                                33   0.28 
gi|169215850 PREDICTED: transmembrane protein 46-like [Homo sapi...    32   0.62 
gi|56118234 proline rich 6 [Homo sapiens]                              32   0.62 
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]            32   0.81 
gi|239751314 PREDICTED: hypothetical protein XP_002347802 [Homo ...    32   0.81 
gi|239757014 PREDICTED: hypothetical protein [Homo sapiens]            32   1.1  
gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo ...    32   1.1  
gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo ...    32   1.1  
gi|21955174 kinesin family member C2 [Homo sapiens]                    32   1.1  
gi|148229134 ring finger and KH domain containing 2 [Homo sapiens]     32   1.1  
gi|24762236 PRP38 pre-mRNA processing factor 38 (yeast) domain c...    32   1.1  
gi|120587019 zinc finger protein 318 [Homo sapiens]                    31   1.4  
gi|30039694 zinc finger protein 598 [Homo sapiens]                     31   1.4  
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        31   1.4  
gi|167234419 thyroid hormone receptor associated protein 3 [Homo...    31   1.4  
gi|71773208 alpha-2C-adrenergic receptor [Homo sapiens]                31   1.8  
gi|169179422 PREDICTED: hypothetical protein [Homo sapiens]            30   2.4  
gi|239749048 PREDICTED: hypothetical protein XP_002346892 [Homo ...    30   2.4  
gi|239743075 PREDICTED: hypothetical protein XP_002342752 [Homo ...    30   2.4  
gi|239508721 PREDICTED: hypothetical protein [Homo sapiens]            30   2.4  
gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]            30   3.1  
gi|239745038 PREDICTED: hypothetical protein XP_002343338 [Homo ...    30   3.1  
gi|158854042 hypothetical protein LOC222183 [Homo sapiens]             30   3.1  
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]         30   3.1  
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         30   3.1  
gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo ...    30   4.0  
gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo ...    30   4.0  

>gi|149944590 SRR1 domain containing [Homo sapiens]
          Length = 339

 Score =  689 bits (1777), Expect = 0.0
 Identities = 339/339 (100%), Positives = 339/339 (100%)

Query: 1   MAAAAAAALESWQAAAPRKRRSAARRPRRREAAPRGREAAPRGREAAPRGPEAEFESDSG 60
           MAAAAAAALESWQAAAPRKRRSAARRPRRREAAPRGREAAPRGREAAPRGPEAEFESDSG
Sbjct: 1   MAAAAAAALESWQAAAPRKRRSAARRPRRREAAPRGREAAPRGREAAPRGPEAEFESDSG 60

Query: 61  VVLRRIWEAEKDLFISDFWSSALETINRCLTKHLEQLKAPVGTLSDIFGNLHLDSLPEES 120
           VVLRRIWEAEKDLFISDFWSSALETINRCLTKHLEQLKAPVGTLSDIFGNLHLDSLPEES
Sbjct: 61  VVLRRIWEAEKDLFISDFWSSALETINRCLTKHLEQLKAPVGTLSDIFGNLHLDSLPEES 120

Query: 121 DVATDSIPREILVTGTCHLKCVCYGIGNFATCIVARNQLTFLLLLLEKCQIPRSHCWVYD 180
           DVATDSIPREILVTGTCHLKCVCYGIGNFATCIVARNQLTFLLLLLEKCQIPRSHCWVYD
Sbjct: 121 DVATDSIPREILVTGTCHLKCVCYGIGNFATCIVARNQLTFLLLLLEKCQIPRSHCWVYD 180

Query: 181 PLFSQLEIEVLNTLGVTVLSENEEGKRSIRGEPTIFYMLHCGTALYNNLLWSNWSVDALS 240
           PLFSQLEIEVLNTLGVTVLSENEEGKRSIRGEPTIFYMLHCGTALYNNLLWSNWSVDALS
Sbjct: 181 PLFSQLEIEVLNTLGVTVLSENEEGKRSIRGEPTIFYMLHCGTALYNNLLWSNWSVDALS 240

Query: 241 KMVIIGNSFKGLEERLLARILQKNYPYIAKILKGLEELEFPQTSQYMDIFNDTSVHWFPV 300
           KMVIIGNSFKGLEERLLARILQKNYPYIAKILKGLEELEFPQTSQYMDIFNDTSVHWFPV
Sbjct: 241 KMVIIGNSFKGLEERLLARILQKNYPYIAKILKGLEELEFPQTSQYMDIFNDTSVHWFPV 300

Query: 301 QKLEQLSIDIWEFREEPDYQDCEDLEIIRNKREDPSATD 339
           QKLEQLSIDIWEFREEPDYQDCEDLEIIRNKREDPSATD
Sbjct: 301 QKLEQLSIDIWEFREEPDYQDCEDLEIIRNKREDPSATD 339


>gi|239756790 PREDICTED: similar to hCG1991532 [Homo sapiens]
          Length = 167

 Score = 38.5 bits (88), Expect = 0.009
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 7/63 (11%)

Query: 7  AALESWQAAAPRKRRSAARRPRRREAAPRGREAAPRGREAAPRGPEAEFESDSGVVLRRI 66
          A L   QA+   K +  +  PR   A+P GR+   +G   AP GP+A F+       +RI
Sbjct: 26 AVLRHLQASVLSKPKQGSSAPRPELASPCGRKTLCKGSRQAPPGPQAHFQ-------QRI 78

Query: 67 WEA 69
          W A
Sbjct: 79 WSA 81


>gi|239745813 PREDICTED: hypothetical protein XP_002343595 [Homo
           sapiens]
          Length = 279

 Score = 35.8 bits (81), Expect = 0.056
 Identities = 18/50 (36%), Positives = 26/50 (52%)

Query: 7   AALESWQAAAPRKRRSAARRPRRREAAPRGREAAPRGREAAPRGPEAEFE 56
           A L   QA+   K +  +  PR   A+P GR+   +G   AP GP+A F+
Sbjct: 138 AVLRHLQASVLSKPKQGSSAPRPELASPCGRKTLCKGSRQAPPGPQAHFQ 187


>gi|146219841 PNMA-like 2 [Homo sapiens]
          Length = 635

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 18  RKRRSAARRPRRREAAPRGREAAPRGREAAPRGPEAEFESDS--GVVLRRI 66
           R RR    R RR     +G++ +  GR +AP   EAE  SD   G+V+  I
Sbjct: 159 RGRRGRRNRTRRNRLTQKGKKRSRGGRPSAPARSEAEDSSDESLGIVIEEI 209


>gi|169215850 PREDICTED: transmembrane protein 46-like [Homo
           sapiens]
          Length = 547

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 23/49 (46%), Positives = 26/49 (53%), Gaps = 5/49 (10%)

Query: 2   AAAAAAALESWQAAAPRKRRSAARRPRRREAAPRGREAAPRGREAAPRG 50
           A   AAAL+   AA PR RRSA R P  R + PR R A  R    +P G
Sbjct: 355 ATFKAAALK---AAVPRARRSANRLP--RPSGPRPRPAPARSPSQSPAG 398


>gi|56118234 proline rich 6 [Homo sapiens]
          Length = 272

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 18/51 (35%), Positives = 28/51 (54%)

Query: 2  AAAAAAALESWQAAAPRKRRSAARRPRRREAAPRGREAAPRGREAAPRGPE 52
          AA AA+A  +   +A R RRSA++   + +A  +     PR R ++PR  E
Sbjct: 22 AAPAASAAAALAPSATRTRRSASQAGSKSQAVEKPPSEKPRLRRSSPRAQE 72


>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 819

 Score = 32.0 bits (71), Expect = 0.81
 Identities = 20/53 (37%), Positives = 31/53 (58%)

Query: 1  MAAAAAAALESWQAAAPRKRRSAARRPRRREAAPRGREAAPRGREAAPRGPEA 53
          +AA +AA   S  AA  +   S  ++ RR++AA  G++A  RG++ A  G EA
Sbjct: 33 LAAESAAPALSAAAAGVKILGSGDKKLRRQKAAAGGKKARLRGQKGAVAGKEA 85



 Score = 29.6 bits (65), Expect = 4.0
 Identities = 16/32 (50%), Positives = 19/32 (59%)

Query: 5   AAAALESWQAAAPRKRRSAARRPRRREAAPRG 36
           AAA  ES  AAA  +   A ++PRRR A  RG
Sbjct: 667 AAAGSESSAAAAVGQEAEARKKPRRRRAKSRG 698



 Score = 28.9 bits (63), Expect = 6.9
 Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 7/54 (12%)

Query: 3   AAAAAALESWQAAAPRKRRSAA------RRPRRREAAPRGRE-AAPRGREAAPR 49
           AAAAA ++S     P+K  +A       ++PRRR A  RG E    R REA  R
Sbjct: 160 AAAAAGVKSQGGEKPQKAAAAGAKSRSGKKPRRRGAKSRGDEDKKGRQREAKSR 213


>gi|239751314 PREDICTED: hypothetical protein XP_002347802 [Homo
          sapiens]
          Length = 179

 Score = 32.0 bits (71), Expect = 0.81
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)

Query: 13 QAAAPRKRRSAARRPRRREAAPRGREAAPRGREAAPRGPEAEFE 56
          + A P++  SA   PR   A+P GR+   +G   AP GP+A F+
Sbjct: 47 EEAKPKQGSSA---PRPELASPCGRKTLCKGSRQAPPGPQAHFQ 87


>gi|239757014 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 281

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 21  RSAARRP-RRREAAPRGR----EAAPRGREAAPRGPEAEFESDSGVVLRRIWEAEKDLFI 75
           R  ARRP RRRE A  GR      A R R            S SG  LRR W+   ++ +
Sbjct: 170 RVPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSV 229

Query: 76  SDFWSSALETINRC 89
                +    ++RC
Sbjct: 230 RPSLPAVSVRVHRC 243


>gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo
           sapiens]
          Length = 598

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 21  RSAARRP-RRREAAPRGR----EAAPRGREAAPRGPEAEFESDSGVVLRRIWEAEKDLFI 75
           R  ARRP RRRE A  GR      A R R            S SG  LRR W+   ++ +
Sbjct: 487 RVPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSV 546

Query: 76  SDFWSSALETINRC 89
                +    ++RC
Sbjct: 547 RPSLPAVSVRVHRC 560


>gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo
           sapiens]
          Length = 616

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 5/74 (6%)

Query: 21  RSAARRP-RRREAAPRGR----EAAPRGREAAPRGPEAEFESDSGVVLRRIWEAEKDLFI 75
           R  ARRP RRRE A  GR      A R R            S SG  LRR W+   ++ +
Sbjct: 505 RVPARRPARRRERALCGRCCSVVVAVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSV 564

Query: 76  SDFWSSALETINRC 89
                +    ++RC
Sbjct: 565 RPSLPAVSVRVHRC 578


>gi|21955174 kinesin family member C2 [Homo sapiens]
          Length = 838

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 7/95 (7%)

Query: 25  RRPRRREAAPRGREAAPRGREAAPRGPEAEFESDS------GVVLRRIWEAEKDLFISDF 78
           R PR R+A  +G + APR R  +P G  ++ ES S      G  L    + ++ L + + 
Sbjct: 132 RSPRGRQALLQGTQPAPRVRPPSPDGSTSQEESPSHFTAVPGEPLGDETQGQQPLQLEED 191

Query: 79  WSSALETINRCLTKHLEQLKAPVGTLSDIFGNLHL 113
              A + + + +   LE+LK  +    +  G L L
Sbjct: 192 -QRAWQRLEQLILGQLEELKQQLEQQEEELGRLRL 225


>gi|148229134 ring finger and KH domain containing 2 [Homo sapiens]
          Length = 659

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 19/45 (42%), Positives = 21/45 (46%)

Query: 14  AAAPRKRRSAARRPRRREAAPRGREAAPRGREAAPRGPEAEFESD 58
           A A R   +AA+   RR A     E AP GR  AP   E E E D
Sbjct: 67  APALRAPAAAAQGQARRAAELSPEERAPPGRPGAPEAAELELEED 111


>gi|24762236 PRP38 pre-mRNA processing factor 38 (yeast) domain
           containing A [Homo sapiens]
          Length = 312

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 18  RKRRSAARRPRRREAAPRGREAAPRGREAAPRGP 51
           R RRS +R PRRR  +P+ R  +PR      + P
Sbjct: 230 RYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSP 263


>gi|120587019 zinc finger protein 318 [Homo sapiens]
          Length = 2279

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 6/57 (10%)

Query: 17 PRKRRSAARRPRRREAAP---RGREAAP---RGREAAPRGPEAEFESDSGVVLRRIW 67
          P    S++R P RR  +P   RGR A+P   RGR  +P  P A   S S    RR++
Sbjct: 43 PPPSGSSSRTPARRPRSPSGHRGRRASPSPPRGRRVSPSPPRARRGSPSPPRGRRLF 99



 Score = 29.3 bits (64), Expect = 5.3
 Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 6/40 (15%)

Query: 18  RKRRSAARRPRRREAAP------RGREAAPRGREAAPRGP 51
           R RR++   PR R  +P      RG  + PRGR   P GP
Sbjct: 64  RGRRASPSPPRGRRVSPSPPRARRGSPSPPRGRRLFPPGP 103


>gi|30039694 zinc finger protein 598 [Homo sapiens]
          Length = 904

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 5/65 (7%)

Query: 2   AAAAAAALESWQAAAPRKRRSAARRPRRREAAPRGREAAPRGREAAPR----GPEAEFES 57
           A  A+ A +  + A   + +    RP++ EAA RG E  PRG   +PR    GP  +  S
Sbjct: 348 AVRASVAAQQQEEARRSEDQEEGGRPKKEEAAARGPE-DPRGPRRSPRTQGEGPGPKETS 406

Query: 58  DSGVV 62
            +G V
Sbjct: 407 TNGPV 411


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 16  APRKRRSAARRPRRREAAPRGREAAPRGREAAPRGPEAEFESDSGVVLRR 65
           +P +RRS +R P RR    R R  A RGR  + R P     S S    RR
Sbjct: 629 SPVRRRSRSRSPARRSGRSRSRTPARRGRSRS-RTPARRGRSRSRTPARR 677


>gi|167234419 thyroid hormone receptor associated protein 3 [Homo
           sapiens]
          Length = 955

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 13/25 (52%), Positives = 18/25 (72%)

Query: 13  QAAAPRKRRSAARRPRRREAAPRGR 37
           QA +PR+ RS +R P+RR  +PR R
Sbjct: 116 QAYSPRRGRSRSRSPKRRSPSPRSR 140


>gi|71773208 alpha-2C-adrenergic receptor [Homo sapiens]
          Length = 462

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 18/44 (40%), Positives = 21/44 (47%)

Query: 10  ESWQAAAPRKRRSAARRPRRREAAPRGREAAPRGREAAPRGPEA 53
           ES  AA  R+RR A RR  RR A   G      G+ A P   E+
Sbjct: 287 ESSAAAERRRRRGALRRGGRRRAGAEGGAGGADGQGAGPGAAES 330


>gi|169179422 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 645

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 33/107 (30%), Positives = 45/107 (42%), Gaps = 10/107 (9%)

Query: 3   AAAAAALESWQAAAPRKRRSAARRPRRREAAPRGREAAPRGREAAPRGPEAEFESDSGVV 62
           +AA A L     +APR R  +A  PR      RG ++A  G   +P  P AE     G++
Sbjct: 544 SAAGAELPGLVPSAPR-RPGSATAPRPLRVPGRGAQSAEPGTPPSP--PGAEHGGGPGLI 600

Query: 63  LRRIWEAEKDLFISDFWSSALETINRCLTKHLEQLKAPVGTLSDIFG 109
           L R   A      +    +A +T   C   HLE      G L D+ G
Sbjct: 601 LLRFPAAPPPRLQAR--PAAPQTCAGCPGAHLEG-----GRLPDVAG 640


>gi|239749048 PREDICTED: hypothetical protein XP_002346892 [Homo
           sapiens]
          Length = 401

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 5/50 (10%)

Query: 4   AAAAALESWQAAAPRK--RRSAARRPRRREAAPRGREAAPRGREAAPRGP 51
           A +AAL   Q AAPR   RR      R R   P     APRGR   PR P
Sbjct: 329 APSAALHKAQLAAPRTFYRRGDVSATRPRPPVP---PLAPRGRGPGPRDP 375


>gi|239743075 PREDICTED: hypothetical protein XP_002342752 [Homo
           sapiens]
          Length = 401

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 5/50 (10%)

Query: 4   AAAAALESWQAAAPRK--RRSAARRPRRREAAPRGREAAPRGREAAPRGP 51
           A +AAL   Q AAPR   RR      R R   P     APRGR   PR P
Sbjct: 329 APSAALHKAQLAAPRTFYRRGDVSATRPRPPVP---PLAPRGRGPGPRDP 375


>gi|239508721 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 401

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 5/50 (10%)

Query: 4   AAAAALESWQAAAPRK--RRSAARRPRRREAAPRGREAAPRGREAAPRGP 51
           A +AAL   Q AAPR   RR      R R   P     APRGR   PR P
Sbjct: 329 APSAALHKAQLAAPRTFYRRGDVSATRPRPPVP---PLAPRGRGPGPRDP 375


>gi|239753335 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 113

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 25/69 (36%), Positives = 31/69 (44%), Gaps = 8/69 (11%)

Query: 3  AAAAAALESWQAAAPRKRRSAARRPRRRE------AAPRGREAAPRGREAAPRGPEAEFE 56
          A A +   S QA  P   R + RRP RR+       +P  R AA  GR     GP A+  
Sbjct: 16 ARAPSGGGSGQAQRPGPGRGSWRRPPRRQRPGPAAPSPPARGAAAWGRSGG--GPAAQSG 73

Query: 57 SDSGVVLRR 65
           D G + RR
Sbjct: 74 GDGGGLPRR 82


>gi|239745038 PREDICTED: hypothetical protein XP_002343338 [Homo
           sapiens]
          Length = 244

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 17/41 (41%), Positives = 18/41 (43%)

Query: 17  PRKRRSAARRPRRREAAPRGREAAPRGREAAPRGPEAEFES 57
           PR     A R RRR A PR     PR    AP GP    +S
Sbjct: 74  PRPSCPLASRDRRRPAIPRASPDRPRPISPAPPGPPTSRQS 114


>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
          Length = 653

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 22/52 (42%), Positives = 24/52 (46%), Gaps = 6/52 (11%)

Query: 14  AAAPRKRRSAARRPRRREAAPRGREAAPRGREAAPRG-----PEAEFESDSG 60
           A   R+RR   RR R   +APR R    R R A PRG       A   SDSG
Sbjct: 383 AGRRRRRRRRRRRSRSSASAPR-RRGRRRPRPAPPRGSSRSLSRARSSSDSG 433


>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
          Length = 953

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 17/59 (28%), Positives = 28/59 (47%)

Query: 18  RKRRSAARRPRRREAAPRGREAAPRGREAAPRGPEAEFESDSGVVLRRIWEAEKDLFIS 76
           ++R     +P+ R   P  R+A P  +EAA  GP+ +   +     RR    +K L +S
Sbjct: 474 KEREKEKGKPKPRSPQPPSRQAEPPKKEAATTGPQVKRADEWKDPWRRSKSPKKKLGVS 532


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 14  AAAPRKRRSAARRPRRREAAPRGREAAPRGREAAP 48
           A  PR+RR+    PRRR  +P  R  +P  R  +P
Sbjct: 564 APPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSP 598


>gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo
           sapiens]
          Length = 202

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 2   AAAAAAALESWQAAAPRKRRSAARRPRRREAAPR--GREAAPRGREAAPRGPEAE 54
           A  AAA     Q  APR     + RP+  E  PR  GR A   G  A P G  A+
Sbjct: 121 APPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQ 175


>gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo
           sapiens]
          Length = 202

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 21/55 (38%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 2   AAAAAAALESWQAAAPRKRRSAARRPRRREAAPR--GREAAPRGREAAPRGPEAE 54
           A  AAA     Q  APR     + RP+  E  PR  GR A   G  A P G  A+
Sbjct: 121 APPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLAQ 175


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,466,921
Number of Sequences: 37866
Number of extensions: 620166
Number of successful extensions: 3058
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 2931
Number of HSP's gapped (non-prelim): 161
length of query: 339
length of database: 18,247,518
effective HSP length: 103
effective length of query: 236
effective length of database: 14,347,320
effective search space: 3385967520
effective search space used: 3385967520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.