Guide to the Human Genome
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Name: NBEAL2 Sequence: fasta or formatted (2754aa) NCBI GI: 149944548
Description:

neurobeachin-like 2

Referenced in:

Neurons
WD Repeat Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0        247           9
 C cysteine            2.0         54           2
 D aspartate           4.0        111           2
 E glutamate           6.4        175           3
 F phenylalanine       3.3         92           2
 G glycine             6.8        186           4
 H histidine           2.9         80           2
 I isoleucine          2.3         64           2
 K lysine              2.5         69           2
 L leucine            14.7        406           4
 M methionine          1.6         43           2
 N asparagine          2.2         60           2
 P proline             7.5        206           4
 Q glutamine           5.3        146           2
 R arginine            6.1        169           2
 S serine              7.7        213           3
 T threonine           5.2        143           6
 V valine              6.8        188           3
 W tryptophan          1.5         42           1
 Y tyrosine            2.2         60           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   neurobeachin-like 2 
NBEAL1                0.414   neurobeachin-like 1 isoform 3 
NBEAL1                0.247   neurobeachin-like 1 isoform 1 
NBEAL1                0.168   neurobeachin-like 1 isoform 2 
NBEA                  0.081   neurobeachin 
LRBA                  0.078   LPS-responsive vesicle trafficking, beach and ancho...
WDFY3                 0.067   WD repeat and FYVE domain containing 3 isoform 1 [Ho...
WDFY4                 0.056   WDFY family member 4 
NSMAF                 0.051   neutral sphingomyelinase (N-SMase) activation associ...
NSMAF                 0.051   neutral sphingomyelinase (N-SMase) activation assoc...
LYST                  0.049   lysosomal trafficking regulator 
WDR81                 0.015   PREDICTED: WD repeat domain 81 
WDR81                 0.015   PREDICTED: WD repeat domain 81 
WDR81                 0.015   PREDICTED: WD repeat domain 81 
WSB2                  0.006   WD SOCS-box protein 2 
SHANK1                0.005   SH3 and multiple ankyrin repeat domains 1 
WDR47                 0.005   WD repeat domain 47 isoform 3 
WDR47                 0.005   WD repeat domain 47 isoform 1 
WDR47                 0.005   WD repeat domain 47 isoform 2 
NLE1                  0.005   Notchless gene homolog isoform a 
WDR3                  0.004   WD repeat-containing protein 3 
WDR23                 0.004   WD repeat domain 23 isoform 1 
WDR23                 0.004   WD repeat domain 23 isoform 2 
HIRA                  0.004   HIR histone cell cycle regulation defective homolog ...
PWP2                  0.004   PWP2 periodic tryptophan protein homolog 
PDCD7                 0.004   programmed cell death 7 
CEBPB                 0.004   CCAAT/enhancer binding protein beta 
ZFPM1                 0.004   zinc finger protein, multitype 1 
WDR69                 0.004   WD repeat domain 69 
STRN3                 0.004   nuclear autoantigen isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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