Guide to the Human Genome
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Name: WDR81 Sequence: fasta or formatted (1941aa) NCBI GI: 239745674
Description:

PREDICTED: WD repeat domain 81

Referenced in:

WD Repeat Proteins

Other entries for this name:
alt prot [2240aa] PREDICTED: WD repeat domain 81
alt mRNA [1941aa] PREDICTED: WD repeat domain 81
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5        146           2
 C cysteine            1.6         32           1
 D aspartate           4.5         88           2
 E glutamate           7.5        146           7
 F phenylalanine       3.2         62           2
 G glycine             8.7        169           4
 H histidine           3.0         59           2
 I isoleucine          2.7         52           2
 K lysine              2.7         53           1
 L leucine            12.2        237           3
 M methionine          1.4         27           1
 N asparagine          1.6         32           1
 P proline             8.1        158           3
 Q glutamine           5.1         99           2
 R arginine            5.9        114           2
 S serine              8.3        162           4
 T threonine           4.7         91           2
 V valine              7.3        142           2
 W tryptophan          1.1         22           1
 Y tyrosine            2.6         50           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: WD repeat domain 81 
WDR81                 1.000   PREDICTED: WD repeat domain 81 
WDR81                 1.000   PREDICTED: WD repeat domain 81 
NBEAL2                0.021   neurobeachin-like 2 
LRBA                  0.021   LPS-responsive vesicle trafficking, beach and ancho...
NSMAF                 0.020   neutral sphingomyelinase (N-SMase) activation associ...
NSMAF                 0.020   neutral sphingomyelinase (N-SMase) activation assoc...
NBEA                  0.020   neurobeachin 
NBEAL1                0.020   neurobeachin-like 1 isoform 3 
NBEAL1                0.020   neurobeachin-like 1 isoform 1 
WDFY3                 0.019   WD repeat and FYVE domain containing 3 isoform 1 [Ho...
NBEAL1                0.018   neurobeachin-like 1 isoform 2 
WDFY4                 0.017   WDFY family member 4 
LYST                  0.011   lysosomal trafficking regulator 
STRN4                 0.009   zinedin isoform 2 
STRN4                 0.009   zinedin isoform 1 
WDR51B                0.009   WD repeat domain 51B 
WDR51A                0.009   WD repeat domain 51A isoform 3 
WDR51A                0.009   WD repeat domain 51A isoform 2 
WDR51A                0.009   WD repeat domain 51A isoform 1 
WDR47                 0.008   WD repeat domain 47 isoform 3 
WDR47                 0.008   WD repeat domain 47 isoform 1 
WDR47                 0.008   WD repeat domain 47 isoform 2 
TAF5                  0.007   TBP-associated factor 5 
KIF21A                0.007   kinesin family member 21A 
KATNB1                0.006   katanin p80 subunit B 1 
WDR5                  0.006   WD repeat domain 5 
WDR5                  0.006   WD repeat domain 5 
AEBP2                 0.006   AE binding protein 2 isoform b 
ANP32C                0.006   acidic nuclear phosphoprotein 32C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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