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Search of human proteins with 149408119
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|149408119 Ies6-similar protein isoform 1 [Homo sapiens]
(228 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|149408119 Ies6-similar protein isoform 1 [Homo sapiens] 461 e-130
gi|42822884 Ies6-similar protein isoform 2 [Homo sapiens] 367 e-102
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 39 0.005
gi|183396783 BCL-6 interacting corepressor isoform a [Homo sapiens] 34 0.12
gi|183396787 BCL-6 interacting corepressor isoform c [Homo sapiens] 34 0.12
gi|183396785 BCL-6 interacting corepressor isoform b [Homo sapiens] 34 0.12
gi|21071037 BCL-6 interacting corepressor isoform a [Homo sapiens] 34 0.12
gi|164663816 LIM domain binding 1 isoform 1 [Homo sapiens] 33 0.26
gi|4504969 LIM domain binding 1 isoform 3 [Homo sapiens] 33 0.26
gi|188536004 zinc finger protein 469 [Homo sapiens] 32 0.34
gi|5453936 POU class 3 homeobox 3 [Homo sapiens] 32 0.34
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 32 0.45
gi|83367077 mucin 16 [Homo sapiens] 32 0.59
gi|167614488 TBC1 domain family, member 10B [Homo sapiens] 31 0.77
gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sap... 31 1.00
gi|4504971 LIM domain binding 2 isoform a [Homo sapiens] 30 1.3
gi|7019535 B-cell linker isoform 1 [Homo sapiens] 30 1.3
gi|73747881 zinc finger, ZZ type with EF hand domain 1 [Homo sap... 30 1.3
gi|4504919 keratin 8 [Homo sapiens] 30 1.7
gi|113426467 PREDICTED: UPF0607 protein ENSP00000381418-like [Ho... 30 1.7
gi|59710093 G-protein coupled receptor 112 [Homo sapiens] 30 1.7
gi|157694497 zinc finger and BTB domain containing 10 isoform b ... 30 1.7
gi|157694499 zinc finger and BTB domain containing 10 isoform a ... 30 1.7
gi|122056614 LIM domain binding 3 isoform 2 [Homo sapiens] 30 2.2
gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens] 30 2.2
gi|239757091 PREDICTED: hypothetical protein [Homo sapiens] 30 2.2
gi|239751597 PREDICTED: hypothetical protein XP_002347925 [Homo ... 30 2.2
gi|239746112 PREDICTED: hypothetical protein XP_002344192 [Homo ... 30 2.2
gi|113426153 PREDICTED: UPF0607 protein ENSP00000381418-like [Ho... 30 2.2
gi|213972636 tumor protein p53 binding protein 1 isoform 1 [Homo... 30 2.2
>gi|149408119 Ies6-similar protein isoform 1 [Homo sapiens]
Length = 228
Score = 461 bits (1185), Expect = e-130
Identities = 228/228 (100%), Positives = 228/228 (100%)
Query: 1 MAAQIPIVATTSTPGIVRNSKKRPASPSHNGSSGGGYGASKKKKASASSFAQTCLSPSTM 60
MAAQIPIVATTSTPGIVRNSKKRPASPSHNGSSGGGYGASKKKKASASSFAQTCLSPSTM
Sbjct: 1 MAAQIPIVATTSTPGIVRNSKKRPASPSHNGSSGGGYGASKKKKASASSFAQTCLSPSTM 60
Query: 61 IVRPPQPRGTTCLLPSAMIVRPPQPRGNGISMEAMSENKMVPSEFSTGPVEKAAKPLPFK 120
IVRPPQPRGTTCLLPSAMIVRPPQPRGNGISMEAMSENKMVPSEFSTGPVEKAAKPLPFK
Sbjct: 61 IVRPPQPRGTTCLLPSAMIVRPPQPRGNGISMEAMSENKMVPSEFSTGPVEKAAKPLPFK 120
Query: 121 DPNFVHSGHGGAVAGKKNRTWKNLKQILASERALPWQLNDPNYFSIDAPPSFKPAKKYSD 180
DPNFVHSGHGGAVAGKKNRTWKNLKQILASERALPWQLNDPNYFSIDAPPSFKPAKKYSD
Sbjct: 121 DPNFVHSGHGGAVAGKKNRTWKNLKQILASERALPWQLNDPNYFSIDAPPSFKPAKKYSD 180
Query: 181 VSGLLANYTDPQSKLRFSTIEEFSYIRRLPSDVVTGYLALRKATSIVP 228
VSGLLANYTDPQSKLRFSTIEEFSYIRRLPSDVVTGYLALRKATSIVP
Sbjct: 181 VSGLLANYTDPQSKLRFSTIEEFSYIRRLPSDVVTGYLALRKATSIVP 228
>gi|42822884 Ies6-similar protein isoform 2 [Homo sapiens]
Length = 192
Score = 367 bits (942), Expect = e-102
Identities = 192/228 (84%), Positives = 192/228 (84%), Gaps = 36/228 (15%)
Query: 1 MAAQIPIVATTSTPGIVRNSKKRPASPSHNGSSGGGYGASKKKKASASSFAQTCLSPSTM 60
MAAQIPIVATTSTPGIVRNSKKRPASPSHNGSSGGGYGASKKKKASASSFAQ
Sbjct: 1 MAAQIPIVATTSTPGIVRNSKKRPASPSHNGSSGGGYGASKKKKASASSFAQ-------- 52
Query: 61 IVRPPQPRGTTCLLPSAMIVRPPQPRGNGISMEAMSENKMVPSEFSTGPVEKAAKPLPFK 120
GISMEAMSENKMVPSEFSTGPVEKAAKPLPFK
Sbjct: 53 ----------------------------GISMEAMSENKMVPSEFSTGPVEKAAKPLPFK 84
Query: 121 DPNFVHSGHGGAVAGKKNRTWKNLKQILASERALPWQLNDPNYFSIDAPPSFKPAKKYSD 180
DPNFVHSGHGGAVAGKKNRTWKNLKQILASERALPWQLNDPNYFSIDAPPSFKPAKKYSD
Sbjct: 85 DPNFVHSGHGGAVAGKKNRTWKNLKQILASERALPWQLNDPNYFSIDAPPSFKPAKKYSD 144
Query: 181 VSGLLANYTDPQSKLRFSTIEEFSYIRRLPSDVVTGYLALRKATSIVP 228
VSGLLANYTDPQSKLRFSTIEEFSYIRRLPSDVVTGYLALRKATSIVP
Sbjct: 145 VSGLLANYTDPQSKLRFSTIEEFSYIRRLPSDVVTGYLALRKATSIVP 192
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 38.5 bits (88), Expect = 0.005
Identities = 38/122 (31%), Positives = 49/122 (40%), Gaps = 18/122 (14%)
Query: 18 RNSKKR---PASPSHNGSSGGGYGASKKKKASASSF-------AQTCLSPS---TMIVRP 64
R+ KKR PASP S+ S K KA SS A C SP T+ +P
Sbjct: 435 RSLKKRQSLPASPRARLSASTASELSPKSKARPSSPSTSWHRPASPCPSPGPGHTLPPKP 494
Query: 65 PQPRGTTCLLPSAMIVRPPQ----PRGNGISMEAMSENKMVPSEFSTGPVEKAAKPLPFK 120
P PRGTT P + R + P G ++ S+ + + S P A P P
Sbjct: 495 PSPRGTTA-SPKGRVRRKEEAKESPSAAGPEDKSQSKRRASNEKESAAPASPAPSPAPSP 553
Query: 121 DP 122
P
Sbjct: 554 TP 555
>gi|183396783 BCL-6 interacting corepressor isoform a [Homo sapiens]
Length = 1721
Score = 33.9 bits (76), Expect = 0.12
Identities = 51/209 (24%), Positives = 83/209 (39%), Gaps = 22/209 (10%)
Query: 12 STPGIVRNSKKRPASPSHNGSSGGGYGASKKKKASASSFAQTCLSPSTMIVRPPQP-RGT 70
+TP ++++ + PA+P+ + SS GA + + L PS++ + P + R
Sbjct: 590 TTPSVIQHVGQPPATPAKHSSSTSSKGAKASNPEPSFKANENGLPPSSIFLSPNEAFRSP 649
Query: 71 TCLLPSAMIVRPPQPRGNGISMEAMSENKMVPSEFSTGPVEKAAKPLPFKDPN-FVHSGH 129
P + + P P GI++ +S + GPV P P PN + GH
Sbjct: 650 PIPYPRSYL---PYPAPEGIAVSPLSLH-------GKGPV----YPHPVLLPNGSLFPGH 695
Query: 130 GGAVAGKKNRTWKNLKQILASERALPWQLNDP---NYFSIDAPPSFKPAKKYSDVSGLLA 186
G + + + AL + P + I+ KP ++ S A
Sbjct: 696 LAPKPGLPYGLPTGRPEFVTYQDALGLGMVHPMLIPHTPIEITKEEKPERR--SRSHERA 753
Query: 187 NYTDPQSKLRFSTIEEFSYIRRLPSDVVT 215
Y DP + RFS I E S + P DV T
Sbjct: 754 RYEDPTLRNRFSEILETSSTKLHP-DVPT 781
>gi|183396787 BCL-6 interacting corepressor isoform c [Homo sapiens]
Length = 1755
Score = 33.9 bits (76), Expect = 0.12
Identities = 51/209 (24%), Positives = 83/209 (39%), Gaps = 22/209 (10%)
Query: 12 STPGIVRNSKKRPASPSHNGSSGGGYGASKKKKASASSFAQTCLSPSTMIVRPPQP-RGT 70
+TP ++++ + PA+P+ + SS GA + + L PS++ + P + R
Sbjct: 590 TTPSVIQHVGQPPATPAKHSSSTSSKGAKASNPEPSFKANENGLPPSSIFLSPNEAFRSP 649
Query: 71 TCLLPSAMIVRPPQPRGNGISMEAMSENKMVPSEFSTGPVEKAAKPLPFKDPN-FVHSGH 129
P + + P P GI++ +S + GPV P P PN + GH
Sbjct: 650 PIPYPRSYL---PYPAPEGIAVSPLSLH-------GKGPV----YPHPVLLPNGSLFPGH 695
Query: 130 GGAVAGKKNRTWKNLKQILASERALPWQLNDP---NYFSIDAPPSFKPAKKYSDVSGLLA 186
G + + + AL + P + I+ KP ++ S A
Sbjct: 696 LAPKPGLPYGLPTGRPEFVTYQDALGLGMVHPMLIPHTPIEITKEEKPERR--SRSHERA 753
Query: 187 NYTDPQSKLRFSTIEEFSYIRRLPSDVVT 215
Y DP + RFS I E S + P DV T
Sbjct: 754 RYEDPTLRNRFSEILETSSTKLHP-DVPT 781
>gi|183396785 BCL-6 interacting corepressor isoform b [Homo sapiens]
Length = 1703
Score = 33.9 bits (76), Expect = 0.12
Identities = 51/209 (24%), Positives = 83/209 (39%), Gaps = 22/209 (10%)
Query: 12 STPGIVRNSKKRPASPSHNGSSGGGYGASKKKKASASSFAQTCLSPSTMIVRPPQP-RGT 70
+TP ++++ + PA+P+ + SS GA + + L PS++ + P + R
Sbjct: 590 TTPSVIQHVGQPPATPAKHSSSTSSKGAKASNPEPSFKANENGLPPSSIFLSPNEAFRSP 649
Query: 71 TCLLPSAMIVRPPQPRGNGISMEAMSENKMVPSEFSTGPVEKAAKPLPFKDPN-FVHSGH 129
P + + P P GI++ +S + GPV P P PN + GH
Sbjct: 650 PIPYPRSYL---PYPAPEGIAVSPLSLH-------GKGPV----YPHPVLLPNGSLFPGH 695
Query: 130 GGAVAGKKNRTWKNLKQILASERALPWQLNDP---NYFSIDAPPSFKPAKKYSDVSGLLA 186
G + + + AL + P + I+ KP ++ S A
Sbjct: 696 LAPKPGLPYGLPTGRPEFVTYQDALGLGMVHPMLIPHTPIEITKEEKPERR--SRSHERA 753
Query: 187 NYTDPQSKLRFSTIEEFSYIRRLPSDVVT 215
Y DP + RFS I E S + P DV T
Sbjct: 754 RYEDPTLRNRFSEILETSSTKLHP-DVPT 781
>gi|21071037 BCL-6 interacting corepressor isoform a [Homo sapiens]
Length = 1721
Score = 33.9 bits (76), Expect = 0.12
Identities = 51/209 (24%), Positives = 83/209 (39%), Gaps = 22/209 (10%)
Query: 12 STPGIVRNSKKRPASPSHNGSSGGGYGASKKKKASASSFAQTCLSPSTMIVRPPQP-RGT 70
+TP ++++ + PA+P+ + SS GA + + L PS++ + P + R
Sbjct: 590 TTPSVIQHVGQPPATPAKHSSSTSSKGAKASNPEPSFKANENGLPPSSIFLSPNEAFRSP 649
Query: 71 TCLLPSAMIVRPPQPRGNGISMEAMSENKMVPSEFSTGPVEKAAKPLPFKDPN-FVHSGH 129
P + + P P GI++ +S + GPV P P PN + GH
Sbjct: 650 PIPYPRSYL---PYPAPEGIAVSPLSLH-------GKGPV----YPHPVLLPNGSLFPGH 695
Query: 130 GGAVAGKKNRTWKNLKQILASERALPWQLNDP---NYFSIDAPPSFKPAKKYSDVSGLLA 186
G + + + AL + P + I+ KP ++ S A
Sbjct: 696 LAPKPGLPYGLPTGRPEFVTYQDALGLGMVHPMLIPHTPIEITKEEKPERR--SRSHERA 753
Query: 187 NYTDPQSKLRFSTIEEFSYIRRLPSDVVT 215
Y DP + RFS I E S + P DV T
Sbjct: 754 RYEDPTLRNRFSEILETSSTKLHP-DVPT 781
>gi|164663816 LIM domain binding 1 isoform 1 [Homo sapiens]
Length = 411
Score = 32.7 bits (73), Expect = 0.26
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 21 KKRPASPSHNGSSGGGY--GASKKKKASASSFAQTCLSPSTMIVRPPQPRG 69
+KR S SSGGG ++ KKK+ AS+FA + P M+V P G
Sbjct: 297 RKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPDVMVVGEPTLMG 347
>gi|4504969 LIM domain binding 1 isoform 3 [Homo sapiens]
Length = 375
Score = 32.7 bits (73), Expect = 0.26
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 21 KKRPASPSHNGSSGGGY--GASKKKKASASSFAQTCLSPSTMIVRPPQPRG 69
+KR S SSGGG ++ KKK+ AS+FA + P M+V P G
Sbjct: 261 RKRKMSGGSTMSSGGGNTNNSNSKKKSPASTFALSSQVPDVMVVGEPTLMG 311
>gi|188536004 zinc finger protein 469 [Homo sapiens]
Length = 3925
Score = 32.3 bits (72), Expect = 0.34
Identities = 34/123 (27%), Positives = 46/123 (37%), Gaps = 13/123 (10%)
Query: 2 AAQIPIVATTSTPGIVRNSKKRPASPSHNGSSGGG-YGASKKKKASASSFAQTCLSPSTM 60
AAQ+P V T PG + RP P G + + SSF T + +
Sbjct: 144 AAQLPEVDTPQGPGT--GAPLRPGLPRTEAQPAAEELGFHRCFQEPPSSFTSTNYTSPSA 201
Query: 61 IVRPPQP-----RGTTCLLPSAMIVRPPQPRGNGISMEAMSENKMVPSEFSTGPVEKAAK 115
RPP P RGT+ L P + P S +EN + F P E +
Sbjct: 202 TPRPPAPGPPQSRGTSPLQPGSY---PEYQASGADSWPPAAENSFPGANFGVPPAE--PE 256
Query: 116 PLP 118
P+P
Sbjct: 257 PIP 259
>gi|5453936 POU class 3 homeobox 3 [Homo sapiens]
Length = 500
Score = 32.3 bits (72), Expect = 0.34
Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 24 PASPSHNGSSGGGYGASKKKKASASSFAQTCLSPSTMIVRPPQPRGTTCLLP-----SAM 78
P P H G GG +GA+ A+A++ A PS + P P+ P + M
Sbjct: 175 PPPPPHQGHPGG-WGAAAAAAAAAAAAAAAAHLPSMAGGQQPPPQSLLYSQPGGFTVNGM 233
Query: 79 IVRPPQPRGNG 89
+ PP P G G
Sbjct: 234 LSAPPGPGGGG 244
>gi|111120318 NK6 transcription factor related, locus 1 [Homo
sapiens]
Length = 367
Score = 32.0 bits (71), Expect = 0.45
Identities = 22/85 (25%), Positives = 34/85 (40%), Gaps = 5/85 (5%)
Query: 6 PIVATTSTPGIVRNSKKRPASPSHNGS-----SGGGYGASKKKKASASSFAQTCLSPSTM 60
P + +TP + + RP+ P +G+ S G +S ASASS + + +
Sbjct: 87 PQQLSAATPHGINDILSRPSMPVASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAA 146
Query: 61 IVRPPQPRGTTCLLPSAMIVRPPQP 85
P G LP + PP P
Sbjct: 147 AAAASSPAGLLAGLPRFSSLSPPPP 171
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 31.6 bits (70), Expect = 0.59
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 8/100 (8%)
Query: 7 IVATTSTPGIVRNSKKRPASPSHNGSSGGGYGASKKKKASASSFAQTCLSPSTMIVRPPQ 66
++AT+S+ ++ SP+ +G S K + ++ + T SPS V PP+
Sbjct: 11877 LLATSSSAETSTSTLTLTVSPAVSGLSSASITTDKPQTVTSWN---TETSPSVTSVGPPE 11933
Query: 67 ----PRGTTC-LLPSAMIVRPPQPRGNGISMEAMSENKMV 101
GTT L+PS M P G G+S + MV
Sbjct: 11934 FSRTVTGTTMTLIPSEMPTPPKTSHGEGVSPTTILRTTMV 11973
>gi|167614488 TBC1 domain family, member 10B [Homo sapiens]
Length = 808
Score = 31.2 bits (69), Expect = 0.77
Identities = 29/101 (28%), Positives = 42/101 (41%), Gaps = 9/101 (8%)
Query: 28 SHNGSSGGGYGASKKKKASASSFAQTCLSPSTMIVRPPQPRGTTCLLPSAMIVRPPQPRG 87
S +G GG+GA+ ASA + P T P G TC P A++ P P
Sbjct: 187 SASGQVTGGHGAAAATSASAGQAPEDPSGPGT------GPSG-TCEAPVAVVTVTPAPEP 239
Query: 88 NGISMEAMSENKMVPSEFSTGPVEKAAKPLPFKDPNFVHSG 128
S + S + + P +GP +A L + D + SG
Sbjct: 240 AENSQDLGSTSSLGPG--ISGPRGQAPDTLSYLDSVSLMSG 278
>gi|120587025 SH3 and multiple ankyrin repeat domains 1 [Homo sapiens]
Length = 2161
Score = 30.8 bits (68), Expect = 1.00
Identities = 31/108 (28%), Positives = 42/108 (38%), Gaps = 6/108 (5%)
Query: 26 SPSHNGSSGGGYGASKKKKASASSFAQTCLSPSTMIVRPPQPRGTTCLLPSAMIVRPPQP 85
SPSH+GS+GGG G+S+ S + M V RG L V
Sbjct: 1063 SPSHHGSAGGGGGSSQGPALRYFQLPPRAAS-AAMYVPARSGRGRKGPLVKQTKVEGEPQ 1121
Query: 86 RGNGI--SMEAMSENKMVPSEFSTGPVEKAAKPLP---FKDPNFVHSG 128
+G G+ + S P P EK + P+P K P+ SG
Sbjct: 1122 KGGGLPPAPSPTSPASPQPPPAVAAPSEKNSIPIPTIIIKAPSTSSSG 1169
>gi|4504971 LIM domain binding 2 isoform a [Homo sapiens]
Length = 373
Score = 30.4 bits (67), Expect = 1.3
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 6 PIVATTSTPGIVRNSKKRPASPSHNGSSGGGYGAS-KKKKASASSFAQTCLSPSTMIVRP 64
P T P R +K S + N S+G ++ KKK +A++ + + P M+V
Sbjct: 245 PPAEPTRQPTTKRRKRKNSTSSTSNSSAGNNANSTGSKKKTTAANLSLSSQVPDVMVVGE 304
Query: 65 PQPRG 69
P G
Sbjct: 305 PTLMG 309
>gi|7019535 B-cell linker isoform 1 [Homo sapiens]
Length = 456
Score = 30.4 bits (67), Expect = 1.3
Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 15/133 (11%)
Query: 35 GGYGASKKKKASASSFAQTCLSPSTMIVRPPQPRGTTCLLPSAMIVR----PPQPRG--- 87
G Y ++ + + F++T S + P + T LP+ ++ PP+P+G
Sbjct: 117 GEYIDNRSSQRHSPPFSKTLPSKPSW---PSEKARLTSTLPALTALQKPQVPPKPKGLLE 173
Query: 88 ----NGISMEAMSENKMVPSEFSTGPVEKAAKPLPFKDPN-FVHSGHGGAVAGKKNRTWK 142
+ +E EN + P+E S+ P EKA PN + G +G+ + W+
Sbjct: 174 DEADYVVPVEDNDENYIHPTESSSPPPEKAPMVNRSTKPNSSTPASPPGTASGRNSGAWE 233
Query: 143 NLKQILASERALP 155
A+ LP
Sbjct: 234 TKSPPPAAPSPLP 246
>gi|73747881 zinc finger, ZZ type with EF hand domain 1 [Homo sapiens]
Length = 2961
Score = 30.4 bits (67), Expect = 1.3
Identities = 31/110 (28%), Positives = 41/110 (37%), Gaps = 25/110 (22%)
Query: 25 ASPSHNGSSGGGYGASKKKKASAS--------SFAQTCLSPSTMIVRPPQPRGTTCLLPS 76
A+P G G G K +S+ + A+ LSPST RPP RG LL
Sbjct: 1479 AAPPATGDQSPGLGTQPKLPSSSGLPAADVSPATAEEPLSPSTPTRRPPFTRGRLRLL-- 1536
Query: 77 AMIVRPPQPRGNGISMEAMSENKMVPSEFSTGPVEKAAKPLPFKDPNFVH 126
S +M E ++VP+ PV K KD + H
Sbjct: 1537 --------------SFRSMEEARLVPTVKEKYPVLKDVMDF-IKDQSLSH 1571
>gi|4504919 keratin 8 [Homo sapiens]
Length = 483
Score = 30.0 bits (66), Expect = 1.7
Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 11 TSTPG--IVRNSKKRPASPSHNGSSGGGY-GASKKKKASASSFAQTCLSPSTMIVRP 64
TS PG I +S R S + G GGGY GAS +A + Q+ LSP + V P
Sbjct: 26 TSGPGSRISSSSFSRVGSSNFRGGLGGGYGGASGMGGITAVTVNQSLLSPLVLEVDP 82
>gi|113426467 PREDICTED: UPF0607 protein ENSP00000381418-like [Homo
sapiens]
Length = 415
Score = 30.0 bits (66), Expect = 1.7
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 9/104 (8%)
Query: 12 STPGIVR-NSKKRPASPSHNGSSGGG----YGASKKKKASASSFAQTCLSPSTMIV---- 62
S+PG++ +P P+ GSS G S +K+ + Q L+P +
Sbjct: 287 SSPGLLMVGEDMQPKDPAALGSSRSSPPRAAGHSSRKRKLSGPLLQLQLTPPLQLRWDRN 346
Query: 63 RPPQPRGTTCLLPSAMIVRPPQPRGNGISMEAMSENKMVPSEFS 106
P P CL P A++V G + M +N V S S
Sbjct: 347 EGPPPAKLPCLSPEALLVGQASQGGGRLQQGNMHKNMRVLSRTS 390
>gi|59710093 G-protein coupled receptor 112 [Homo sapiens]
Length = 3080
Score = 30.0 bits (66), Expect = 1.7
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 11/117 (9%)
Query: 6 PIVATTST----PGIVRNSKKRPASPSHNGSSGGGYGASKKKKASASSFAQTCLSPSTMI 61
PIV T S+ PG +++ + P SS S A+ SS T + + +
Sbjct: 1533 PIVITKSSKTMHPGCLKSPCTATSGPMSEMSSIP-VNNSAFTPATVSSDTSTRVGLFSTL 1591
Query: 62 VRPPQPRGTTCLLPSAMIVRPPQPRGNGISMEAMSENKMVPSEFSTGPVEKAAKPLP 118
+ PR T + S + V P G A S+NKMV S F+T +E ++ P
Sbjct: 1592 LSSVTPRTTMTMQTSTLDVTPVIYAG------ATSKNKMVSSAFTTEMIEAPSRITP 1642
>gi|157694497 zinc finger and BTB domain containing 10 isoform b
[Homo sapiens]
Length = 847
Score = 30.0 bits (66), Expect = 1.7
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 12/85 (14%)
Query: 64 PPQPRGTTCLLPSAMIVRPPQPRG--NGISMEAMSENKMVPSEFSTGPVEKAAK------ 115
PPQP+ P+ ++PP RG + +E + + E S GP AA+
Sbjct: 39 PPQPQPRQPPPPAPPALQPPNGRGADEEVELEGLEPQDL---EASAGPAAGAAEEAKELL 95
Query: 116 -PLPFKDPNFVHSGHGGAVAGKKNR 139
P P + G GG + ++NR
Sbjct: 96 LPQDAGGPTSLGGGAGGPLLAERNR 120
>gi|157694499 zinc finger and BTB domain containing 10 isoform a
[Homo sapiens]
Length = 871
Score = 30.0 bits (66), Expect = 1.7
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 12/85 (14%)
Query: 64 PPQPRGTTCLLPSAMIVRPPQPRG--NGISMEAMSENKMVPSEFSTGPVEKAAK------ 115
PPQP+ P+ ++PP RG + +E + + E S GP AA+
Sbjct: 39 PPQPQPRQPPPPAPPALQPPNGRGADEEVELEGLEPQDL---EASAGPAAGAAEEAKELL 95
Query: 116 -PLPFKDPNFVHSGHGGAVAGKKNR 139
P P + G GG + ++NR
Sbjct: 96 LPQDAGGPTSLGGGAGGPLLAERNR 120
>gi|122056614 LIM domain binding 3 isoform 2 [Homo sapiens]
Length = 617
Score = 29.6 bits (65), Expect = 2.2
Identities = 31/129 (24%), Positives = 47/129 (36%), Gaps = 12/129 (9%)
Query: 6 PIVATTSTPGIVRNSKKRPASP----------SHNGSSGGGYGASKKKKASASSFAQTCL 55
P VA +S P + + PA+P S S AS + ++++ T
Sbjct: 260 PAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASTYSPSPGANYSPTPY 319
Query: 56 SPSTMIVRPPQPRGTTCLLPSAMIVRPPQPRGNGISMEAMSENKMVPSEFSTGPVEKAAK 115
+PS P P PS + P P A + N +S GP E A++
Sbjct: 320 TPSPAPAYTPSP--APAYTPSPVPTYTPSPAPAYTPSPAPNYNPAPSVAYSGGPAEPASR 377
Query: 116 PLPFKDPNF 124
P D +F
Sbjct: 378 PPWVTDDSF 386
>gi|45592959 LIM domain binding 3 isoform 1 [Homo sapiens]
Length = 727
Score = 29.6 bits (65), Expect = 2.2
Identities = 31/129 (24%), Positives = 47/129 (36%), Gaps = 12/129 (9%)
Query: 6 PIVATTSTPGIVRNSKKRPASP----------SHNGSSGGGYGASKKKKASASSFAQTCL 55
P VA +S P + + PA+P S S AS + ++++ T
Sbjct: 370 PAVAASSAPATHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASTYSPSPGANYSPTPY 429
Query: 56 SPSTMIVRPPQPRGTTCLLPSAMIVRPPQPRGNGISMEAMSENKMVPSEFSTGPVEKAAK 115
+PS P P PS + P P A + N +S GP E A++
Sbjct: 430 TPSPAPAYTPSP--APAYTPSPVPTYTPSPAPAYTPSPAPNYNPAPSVAYSGGPAEPASR 487
Query: 116 PLPFKDPNF 124
P D +F
Sbjct: 488 PPWVTDDSF 496
>gi|239757091 PREDICTED: hypothetical protein [Homo sapiens]
Length = 194
Score = 29.6 bits (65), Expect = 2.2
Identities = 36/133 (27%), Positives = 50/133 (37%), Gaps = 16/133 (12%)
Query: 15 GIVRNSKKRPASPSHNGS-SGGGYGASKKKKASASSFAQTCLSPSTMIVRPP--QPRGTT 71
G VR+ PAS S G G G A + ASS C+ ++++ RPP P G
Sbjct: 3 GGVRSLVSTPASWSAAGPPDGAGRPAEHEATGGASSLHIKCMEAASLLPRPPGKAPPGAA 62
Query: 72 CLLPSAMIVRPPQPRGNGISMEAMSENKMVPSEFSTGPVEKAAKPLPFKDPNFVHSGHGG 131
S V G G+ + VP+ GP ++ P + H GH
Sbjct: 63 ---KSTSRVHCRAAEGGGL--------RPVPAVPLPGPAGRSGGPGAWSAQK--HGGHLS 109
Query: 132 AVAGKKNRTWKNL 144
AG R + L
Sbjct: 110 GRAGGTGRKTEGL 122
>gi|239751597 PREDICTED: hypothetical protein XP_002347925 [Homo
sapiens]
Length = 194
Score = 29.6 bits (65), Expect = 2.2
Identities = 36/133 (27%), Positives = 50/133 (37%), Gaps = 16/133 (12%)
Query: 15 GIVRNSKKRPASPSHNGS-SGGGYGASKKKKASASSFAQTCLSPSTMIVRPP--QPRGTT 71
G VR+ PAS S G G G A + ASS C+ ++++ RPP P G
Sbjct: 3 GGVRSLVSTPASWSAAGPPDGAGRPAEHEATGGASSLHIKCMEAASLLPRPPGKAPPGAA 62
Query: 72 CLLPSAMIVRPPQPRGNGISMEAMSENKMVPSEFSTGPVEKAAKPLPFKDPNFVHSGHGG 131
S V G G+ + VP+ GP ++ P + H GH
Sbjct: 63 ---KSTSRVHCRAAEGGGL--------RPVPAVPLPGPAGRSGGPGAWSAQK--HGGHLS 109
Query: 132 AVAGKKNRTWKNL 144
AG R + L
Sbjct: 110 GRAGGTGRKTEGL 122
>gi|239746112 PREDICTED: hypothetical protein XP_002344192 [Homo
sapiens]
Length = 194
Score = 29.6 bits (65), Expect = 2.2
Identities = 36/133 (27%), Positives = 50/133 (37%), Gaps = 16/133 (12%)
Query: 15 GIVRNSKKRPASPSHNGS-SGGGYGASKKKKASASSFAQTCLSPSTMIVRPP--QPRGTT 71
G VR+ PAS S G G G A + ASS C+ ++++ RPP P G
Sbjct: 3 GGVRSLVSTPASWSAAGPPDGAGRPAEHEATGGASSLHIKCMEAASLLPRPPGKAPPGAA 62
Query: 72 CLLPSAMIVRPPQPRGNGISMEAMSENKMVPSEFSTGPVEKAAKPLPFKDPNFVHSGHGG 131
S V G G+ + VP+ GP ++ P + H GH
Sbjct: 63 ---KSTSRVHCRAAEGGGL--------RPVPAVPLPGPAGRSGGPGAWSAQK--HGGHLS 109
Query: 132 AVAGKKNRTWKNL 144
AG R + L
Sbjct: 110 GRAGGTGRKTEGL 122
>gi|113426153 PREDICTED: UPF0607 protein ENSP00000381418-like [Homo
sapiens]
Length = 415
Score = 29.6 bits (65), Expect = 2.2
Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 9/104 (8%)
Query: 12 STPGIVR-NSKKRPASPSHNGSSGGG----YGASKKKKASASSFAQTCLSPSTMIV---- 62
S+PG++ +P P+ GSS G S +K+ + Q L+P +
Sbjct: 287 SSPGLLMVGEDMQPKDPAALGSSRSSPPRAAGHSSRKRKLSGPLLQLQLTPPLQLRWDRD 346
Query: 63 RPPQPRGTTCLLPSAMIVRPPQPRGNGISMEAMSENKMVPSEFS 106
P P CL P A++V R + M +N V S S
Sbjct: 347 EGPPPAKLPCLSPEALLVGQASQREGRLQQGNMHKNMRVLSRTS 390
>gi|213972636 tumor protein p53 binding protein 1 isoform 1 [Homo
sapiens]
Length = 1977
Score = 29.6 bits (65), Expect = 2.2
Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 2/86 (2%)
Query: 16 IVRNSKKRPASPSHNGSSGGGYGASKKKKASA--SSFAQTCLSPSTMIVRPPQPRGTTCL 73
+V N ++ +G+SG + K A SS TC S S +I + PQP T+ +
Sbjct: 66 VVSNPEQTAGEERGDGNSGFNEHLKENKVADPVDSSNLDTCGSISQVIEQLPQPNRTSSV 125
Query: 74 LPSAMIVRPPQPRGNGISMEAMSENK 99
L ++ P G +E + K
Sbjct: 126 LGMSVESAPAVEEEKGEELEQKEKEK 151
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.129 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,187,913
Number of Sequences: 37866
Number of extensions: 527128
Number of successful extensions: 1748
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 1702
Number of HSP's gapped (non-prelim): 92
length of query: 228
length of database: 18,247,518
effective HSP length: 99
effective length of query: 129
effective length of database: 14,498,784
effective search space: 1870343136
effective search space used: 1870343136
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.