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Search of human proteins with 148664216
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|148664216 hypothetical protein LOC163859 [Homo sapiens]
(451 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|148664216 hypothetical protein LOC163859 [Homo sapiens] 903 0.0
gi|5803167 splicing factor 3a, subunit 3 [Homo sapiens] 77 4e-14
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 42 0.001
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 41 0.002
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 41 0.002
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 41 0.002
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 41 0.002
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 41 0.002
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 41 0.002
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 41 0.002
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 41 0.002
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 41 0.003
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 41 0.003
gi|221219020 NYD-SP11 protein [Homo sapiens] 40 0.004
gi|42518068 trans-golgi network protein 2 [Homo sapiens] 40 0.006
gi|119220598 apolipoprotein B48 receptor [Homo sapiens] 40 0.006
gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens] 39 0.007
gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo ... 39 0.010
gi|224589071 BMS1-like, ribosome assembly protein [Homo sapiens] 39 0.013
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 38 0.016
gi|4505257 moesin [Homo sapiens] 38 0.021
gi|62243374 MAD1-like 1 protein [Homo sapiens] 38 0.021
gi|62243369 MAD1-like 1 protein [Homo sapiens] 38 0.021
gi|62243332 MAD1-like 1 protein [Homo sapiens] 38 0.021
gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo sapi... 37 0.028
gi|4504487 histidine rich calcium binding protein precursor [Hom... 37 0.028
gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens] 37 0.028
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 37 0.028
gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens] 37 0.028
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 37 0.037
>gi|148664216 hypothetical protein LOC163859 [Homo sapiens]
Length = 451
Score = 903 bits (2333), Expect = 0.0
Identities = 451/451 (100%), Positives = 451/451 (100%)
Query: 1 MAEAAALVWIRGPGFGCKAVRCASGRCTVRDFIHRHCQDQNVPVENFFVKCNGALINTSD 60
MAEAAALVWIRGPGFGCKAVRCASGRCTVRDFIHRHCQDQNVPVENFFVKCNGALINTSD
Sbjct: 1 MAEAAALVWIRGPGFGCKAVRCASGRCTVRDFIHRHCQDQNVPVENFFVKCNGALINTSD 60
Query: 61 TVQHGAVYSLEPRLCGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAE 120
TVQHGAVYSLEPRLCGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAE
Sbjct: 61 TVQHGAVYSLEPRLCGGKGGFGSMLRALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAE 120
Query: 121 WVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKGMQAASS 180
WVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKGMQAASS
Sbjct: 121 WVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKGMQAASS 180
Query: 181 KMVSAEISENRKRQWPTKSQTDRGASAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAPS 240
KMVSAEISENRKRQWPTKSQTDRGASAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAPS
Sbjct: 181 KMVSAEISENRKRQWPTKSQTDRGASAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAPS 240
Query: 241 TSGMGFHAPKIGSNGVEMAAKFPSGSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAE 300
TSGMGFHAPKIGSNGVEMAAKFPSGSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAE
Sbjct: 241 TSGMGFHAPKIGSNGVEMAAKFPSGSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAE 300
Query: 301 LGESKEHMESRMVTETEETQEKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPE 360
LGESKEHMESRMVTETEETQEKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPE
Sbjct: 301 LGESKEHMESRMVTETEETQEKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPE 360
Query: 361 ERENVAVAKLQESQPGNAVIDKETIDLLAFTSVAELELLGLEKLKCELMALGLKCGGTLQ 420
ERENVAVAKLQESQPGNAVIDKETIDLLAFTSVAELELLGLEKLKCELMALGLKCGGTLQ
Sbjct: 361 ERENVAVAKLQESQPGNAVIDKETIDLLAFTSVAELELLGLEKLKCELMALGLKCGGTLQ 420
Query: 421 ERAARLFSVRGLAKEQIDPALFAKPLKGKKK 451
ERAARLFSVRGLAKEQIDPALFAKPLKGKKK
Sbjct: 421 ERAARLFSVRGLAKEQIDPALFAKPLKGKKK 451
>gi|5803167 splicing factor 3a, subunit 3 [Homo sapiens]
Length = 501
Score = 76.6 bits (187), Expect = 4e-14
Identities = 39/65 (60%), Positives = 49/65 (75%)
Query: 385 IDLLAFTSVAELELLGLEKLKCELMALGLKCGGTLQERAARLFSVRGLAKEQIDPALFAK 444
+DL AF+S EL LGL++LK L+ALGLKCGGTL+ERA RLFS +G + E +D +LFAK
Sbjct: 244 LDLSAFSSWEELASLGLDRLKSALLALGLKCGGTLEERAQRLFSTKGKSLESLDTSLFAK 303
Query: 445 PLKGK 449
K K
Sbjct: 304 NPKSK 308
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 42.0 bits (97), Expect = 0.001
Identities = 53/249 (21%), Positives = 97/249 (38%), Gaps = 24/249 (9%)
Query: 93 EKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFT 152
E++++R R S + RD E+ +++ ERE E+E++R +R+ K
Sbjct: 372 ERSSDRNKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKR 431
Query: 153 SPDYQQQCHEMAERLEDSVLKGMQAASSKMVSAEISENRKRQWPTKSQTDRGASAGKRRC 212
+ ++ +LE + + A ++ + EI E +K + + ++ A + R
Sbjct: 432 DREEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTR-----EYEKEAEREEERR 486
Query: 213 FWLGMEGLETAEGSNSESSDDDSEEAPSTSGMGFHAPKIGSNGVEMAA--------KFPS 264
+ E E E DDD ++ G ++ EM A K
Sbjct: 487 REMAKEAKRLKE--FLEDYDDDRDDPKYYRGSALQ-KRLRDREKEMEADERDRKREKEEL 543
Query: 265 GSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAELGESKEHMESRMVTETEETQEKKA 324
R R++ H P D+ +E + + E E EE QEK+
Sbjct: 544 EEIRQRLLAEGHPDP--------DAELQRMEQEAERRRQPQIKQEPESEEEEEEKQEKEE 595
Query: 325 ESKEPIEEE 333
+ +EP+EEE
Sbjct: 596 KREEPMEEE 604
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 41.2 bits (95), Expect = 0.002
Identities = 60/291 (20%), Positives = 116/291 (39%), Gaps = 30/291 (10%)
Query: 90 AQIEKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKH 149
A+ ++ RE ++ + +A A+ K QAEREA++ Q +R+Q ++V +
Sbjct: 1351 AEQQRAEERERLAEVEAALEKQRQLAEAHAQ-AKAQAEREAKELQ---QRMQEEVVRREE 1406
Query: 150 CFTSPDYQQQCHEMAERLEDSVLKGMQAASSKMVSAEISENRK----------RQWPTKS 199
+ D QQQ + E L+ +K AE +E + R +
Sbjct: 1407 --AAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLEAT 1464
Query: 200 QTDRGASAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAPSTSGMGFHAPKIGSNGVEMA 259
+ RG + G+ + E E + E ++ + S A VE+A
Sbjct: 1465 ERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAE------VELA 1518
Query: 260 AKFPSGSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAELGESKEHMESRMVTETEET 319
++ + ++ AR + E+L++ ++ R + + + + +E+ + E
Sbjct: 1519 SRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAEL 1578
Query: 320 Q-------EKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEERE 363
Q EK A+ + ++EE ++ E E R + AE A EE E
Sbjct: 1579 QSKRASFAEKTAQLERSLQEEHVAVAQLRE-EAERRAQQQAEAERAREEAE 1628
Score = 28.9 bits (63), Expect = 10.0
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 119 AEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKGMQAA 178
AE + QAEREA + ++++E +R S + Q Q A+ + + K +
Sbjct: 2093 AEEARVQAEREAAQSRRQVEEAER-------LKQSAEEQAQARAQAQAAAEKLRKEAEQE 2145
Query: 179 SSKMVSAEISENRKRQ 194
+++ AE + R++Q
Sbjct: 2146 AARRAQAEQAALRQKQ 2161
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 41.2 bits (95), Expect = 0.002
Identities = 60/291 (20%), Positives = 116/291 (39%), Gaps = 30/291 (10%)
Query: 90 AQIEKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKH 149
A+ ++ RE ++ + +A A+ K QAEREA++ Q +R+Q ++V +
Sbjct: 1355 AEQQRAEERERLAEVEAALEKQRQLAEAHAQ-AKAQAEREAKELQ---QRMQEEVVRREE 1410
Query: 150 CFTSPDYQQQCHEMAERLEDSVLKGMQAASSKMVSAEISENRK----------RQWPTKS 199
+ D QQQ + E L+ +K AE +E + R +
Sbjct: 1411 --AAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLEAT 1468
Query: 200 QTDRGASAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAPSTSGMGFHAPKIGSNGVEMA 259
+ RG + G+ + E E + E ++ + S A VE+A
Sbjct: 1469 ERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAE------VELA 1522
Query: 260 AKFPSGSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAELGESKEHMESRMVTETEET 319
++ + ++ AR + E+L++ ++ R + + + + +E+ + E
Sbjct: 1523 SRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAEL 1582
Query: 320 Q-------EKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEERE 363
Q EK A+ + ++EE ++ E E R + AE A EE E
Sbjct: 1583 QSKRASFAEKTAQLERSLQEEHVAVAQLRE-EAERRAQQQAEAERAREEAE 1632
Score = 28.9 bits (63), Expect = 10.0
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 119 AEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKGMQAA 178
AE + QAEREA + ++++E +R S + Q Q A+ + + K +
Sbjct: 2097 AEEARVQAEREAAQSRRQVEEAER-------LKQSAEEQAQARAQAQAAAEKLRKEAEQE 2149
Query: 179 SSKMVSAEISENRKRQ 194
+++ AE + R++Q
Sbjct: 2150 AARRAQAEQAALRQKQ 2165
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 41.2 bits (95), Expect = 0.002
Identities = 60/291 (20%), Positives = 116/291 (39%), Gaps = 30/291 (10%)
Query: 90 AQIEKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKH 149
A+ ++ RE ++ + +A A+ K QAEREA++ Q +R+Q ++V +
Sbjct: 1351 AEQQRAEERERLAEVEAALEKQRQLAEAHAQ-AKAQAEREAKELQ---QRMQEEVVRREE 1406
Query: 150 CFTSPDYQQQCHEMAERLEDSVLKGMQAASSKMVSAEISENRK----------RQWPTKS 199
+ D QQQ + E L+ +K AE +E + R +
Sbjct: 1407 --AAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLEAT 1464
Query: 200 QTDRGASAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAPSTSGMGFHAPKIGSNGVEMA 259
+ RG + G+ + E E + E ++ + S A VE+A
Sbjct: 1465 ERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAE------VELA 1518
Query: 260 AKFPSGSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAELGESKEHMESRMVTETEET 319
++ + ++ AR + E+L++ ++ R + + + + +E+ + E
Sbjct: 1519 SRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAEL 1578
Query: 320 Q-------EKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEERE 363
Q EK A+ + ++EE ++ E E R + AE A EE E
Sbjct: 1579 QSKRASFAEKTAQLERSLQEEHVAVAQLRE-EAERRAQQQAEAERAREEAE 1628
Score = 28.9 bits (63), Expect = 10.0
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 119 AEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKGMQAA 178
AE + QAEREA + ++++E +R S + Q Q A+ + + K +
Sbjct: 2093 AEEARVQAEREAAQSRRQVEEAER-------LKQSAEEQAQARAQAQAAAEKLRKEAEQE 2145
Query: 179 SSKMVSAEISENRKRQ 194
+++ AE + R++Q
Sbjct: 2146 AARRAQAEQAALRQKQ 2161
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 41.2 bits (95), Expect = 0.002
Identities = 60/291 (20%), Positives = 116/291 (39%), Gaps = 30/291 (10%)
Query: 90 AQIEKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKH 149
A+ ++ RE ++ + +A A+ K QAEREA++ Q +R+Q ++V +
Sbjct: 1319 AEQQRAEERERLAEVEAALEKQRQLAEAHAQ-AKAQAEREAKELQ---QRMQEEVVRREE 1374
Query: 150 CFTSPDYQQQCHEMAERLEDSVLKGMQAASSKMVSAEISENRK----------RQWPTKS 199
+ D QQQ + E L+ +K AE +E + R +
Sbjct: 1375 --AAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLEAT 1432
Query: 200 QTDRGASAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAPSTSGMGFHAPKIGSNGVEMA 259
+ RG + G+ + E E + E ++ + S A VE+A
Sbjct: 1433 ERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAE------VELA 1486
Query: 260 AKFPSGSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAELGESKEHMESRMVTETEET 319
++ + ++ AR + E+L++ ++ R + + + + +E+ + E
Sbjct: 1487 SRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAEL 1546
Query: 320 Q-------EKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEERE 363
Q EK A+ + ++EE ++ E E R + AE A EE E
Sbjct: 1547 QSKRASFAEKTAQLERSLQEEHVAVAQLRE-EAERRAQQQAEAERAREEAE 1596
Score = 28.9 bits (63), Expect = 10.0
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 119 AEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKGMQAA 178
AE + QAEREA + ++++E +R S + Q Q A+ + + K +
Sbjct: 2061 AEEARVQAEREAAQSRRQVEEAER-------LKQSAEEQAQARAQAQAAAEKLRKEAEQE 2113
Query: 179 SSKMVSAEISENRKRQ 194
+++ AE + R++Q
Sbjct: 2114 AARRAQAEQAALRQKQ 2129
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 41.2 bits (95), Expect = 0.002
Identities = 60/291 (20%), Positives = 116/291 (39%), Gaps = 30/291 (10%)
Query: 90 AQIEKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKH 149
A+ ++ RE ++ + +A A+ K QAEREA++ Q +R+Q ++V +
Sbjct: 1488 AEQQRAEERERLAEVEAALEKQRQLAEAHAQ-AKAQAEREAKELQ---QRMQEEVVRREE 1543
Query: 150 CFTSPDYQQQCHEMAERLEDSVLKGMQAASSKMVSAEISENRK----------RQWPTKS 199
+ D QQQ + E L+ +K AE +E + R +
Sbjct: 1544 --AAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLEAT 1601
Query: 200 QTDRGASAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAPSTSGMGFHAPKIGSNGVEMA 259
+ RG + G+ + E E + E ++ + S A VE+A
Sbjct: 1602 ERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAE------VELA 1655
Query: 260 AKFPSGSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAELGESKEHMESRMVTETEET 319
++ + ++ AR + E+L++ ++ R + + + + +E+ + E
Sbjct: 1656 SRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAEL 1715
Query: 320 Q-------EKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEERE 363
Q EK A+ + ++EE ++ E E R + AE A EE E
Sbjct: 1716 QSKRASFAEKTAQLERSLQEEHVAVAQLRE-EAERRAQQQAEAERAREEAE 1765
Score = 28.9 bits (63), Expect = 10.0
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 119 AEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKGMQAA 178
AE + QAEREA + ++++E +R S + Q Q A+ + + K +
Sbjct: 2230 AEEARVQAEREAAQSRRQVEEAER-------LKQSAEEQAQARAQAQAAAEKLRKEAEQE 2282
Query: 179 SSKMVSAEISENRKRQ 194
+++ AE + R++Q
Sbjct: 2283 AARRAQAEQAALRQKQ 2298
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 41.2 bits (95), Expect = 0.002
Identities = 60/291 (20%), Positives = 116/291 (39%), Gaps = 30/291 (10%)
Query: 90 AQIEKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKH 149
A+ ++ RE ++ + +A A+ K QAEREA++ Q +R+Q ++V +
Sbjct: 1329 AEQQRAEERERLAEVEAALEKQRQLAEAHAQ-AKAQAEREAKELQ---QRMQEEVVRREE 1384
Query: 150 CFTSPDYQQQCHEMAERLEDSVLKGMQAASSKMVSAEISENRK----------RQWPTKS 199
+ D QQQ + E L+ +K AE +E + R +
Sbjct: 1385 --AAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLEAT 1442
Query: 200 QTDRGASAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAPSTSGMGFHAPKIGSNGVEMA 259
+ RG + G+ + E E + E ++ + S A VE+A
Sbjct: 1443 ERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAE------VELA 1496
Query: 260 AKFPSGSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAELGESKEHMESRMVTETEET 319
++ + ++ AR + E+L++ ++ R + + + + +E+ + E
Sbjct: 1497 SRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAEL 1556
Query: 320 Q-------EKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEERE 363
Q EK A+ + ++EE ++ E E R + AE A EE E
Sbjct: 1557 QSKRASFAEKTAQLERSLQEEHVAVAQLRE-EAERRAQQQAEAERAREEAE 1606
Score = 28.9 bits (63), Expect = 10.0
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 119 AEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKGMQAA 178
AE + QAEREA + ++++E +R S + Q Q A+ + + K +
Sbjct: 2071 AEEARVQAEREAAQSRRQVEEAER-------LKQSAEEQAQARAQAQAAAEKLRKEAEQE 2123
Query: 179 SSKMVSAEISENRKRQ 194
+++ AE + R++Q
Sbjct: 2124 AARRAQAEQAALRQKQ 2139
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 41.2 bits (95), Expect = 0.002
Identities = 60/291 (20%), Positives = 116/291 (39%), Gaps = 30/291 (10%)
Query: 90 AQIEKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKH 149
A+ ++ RE ++ + +A A+ K QAEREA++ Q +R+Q ++V +
Sbjct: 1337 AEQQRAEERERLAEVEAALEKQRQLAEAHAQ-AKAQAEREAKELQ---QRMQEEVVRREE 1392
Query: 150 CFTSPDYQQQCHEMAERLEDSVLKGMQAASSKMVSAEISENRK----------RQWPTKS 199
+ D QQQ + E L+ +K AE +E + R +
Sbjct: 1393 --AAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLEAT 1450
Query: 200 QTDRGASAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAPSTSGMGFHAPKIGSNGVEMA 259
+ RG + G+ + E E + E ++ + S A VE+A
Sbjct: 1451 ERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAE------VELA 1504
Query: 260 AKFPSGSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAELGESKEHMESRMVTETEET 319
++ + ++ AR + E+L++ ++ R + + + + +E+ + E
Sbjct: 1505 SRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAEL 1564
Query: 320 Q-------EKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEERE 363
Q EK A+ + ++EE ++ E E R + AE A EE E
Sbjct: 1565 QSKRASFAEKTAQLERSLQEEHVAVAQLRE-EAERRAQQQAEAERAREEAE 1614
Score = 28.9 bits (63), Expect = 10.0
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 119 AEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKGMQAA 178
AE + QAEREA + ++++E +R S + Q Q A+ + + K +
Sbjct: 2079 AEEARVQAEREAAQSRRQVEEAER-------LKQSAEEQAQARAQAQAAAEKLRKEAEQE 2131
Query: 179 SSKMVSAEISENRKRQ 194
+++ AE + R++Q
Sbjct: 2132 AARRAQAEQAALRQKQ 2147
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 41.2 bits (95), Expect = 0.002
Identities = 60/291 (20%), Positives = 116/291 (39%), Gaps = 30/291 (10%)
Query: 90 AQIEKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKH 149
A+ ++ RE ++ + +A A+ K QAEREA++ Q +R+Q ++V +
Sbjct: 1378 AEQQRAEERERLAEVEAALEKQRQLAEAHAQ-AKAQAEREAKELQ---QRMQEEVVRREE 1433
Query: 150 CFTSPDYQQQCHEMAERLEDSVLKGMQAASSKMVSAEISENRK----------RQWPTKS 199
+ D QQQ + E L+ +K AE +E + R +
Sbjct: 1434 --AAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVRLQLEAT 1491
Query: 200 QTDRGASAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAPSTSGMGFHAPKIGSNGVEMA 259
+ RG + G+ + E E + E ++ + S A VE+A
Sbjct: 1492 ERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAE------VELA 1545
Query: 260 AKFPSGSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAELGESKEHMESRMVTETEET 319
++ + ++ AR + E+L++ ++ R + + + + +E+ + E
Sbjct: 1546 SRVKAEAEAAREKQRALQALEELRLQAEEAERRLRQAEVERARQVQVALETAQRSAEAEL 1605
Query: 320 Q-------EKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEERE 363
Q EK A+ + ++EE ++ E E R + AE A EE E
Sbjct: 1606 QSKRASFAEKTAQLERSLQEEHVAVAQLRE-EAERRAQQQAEAERAREEAE 1655
Score = 28.9 bits (63), Expect = 10.0
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 7/76 (9%)
Query: 119 AEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKGMQAA 178
AE + QAEREA + ++++E +R S + Q Q A+ + + K +
Sbjct: 2120 AEEARVQAEREAAQSRRQVEEAER-------LKQSAEEQAQARAQAQAAAEKLRKEAEQE 2172
Query: 179 SSKMVSAEISENRKRQ 194
+++ AE + R++Q
Sbjct: 2173 AARRAQAEQAALRQKQ 2188
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 40.8 bits (94), Expect = 0.003
Identities = 68/315 (21%), Positives = 126/315 (40%), Gaps = 44/315 (13%)
Query: 93 EKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFT 152
EK+ EA ++ + EK A K++ E EAE+E+ ++ K P+
Sbjct: 465 EKSEMEEALTAITEELAVSMKEEKKEAAEEKEE-EPEAEEEEVAAKKSPVKATAPEVKEE 523
Query: 153 SPDYQQQCHEMAERLEDSVLKGMQA---ASSKMVSAEISENRKRQWPTKSQTDRGASAGK 209
+ +++ + E ED K QA S K S+E E + + T+++ +
Sbjct: 524 EGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEG------ 577
Query: 210 RRCFWLGMEGLETAEGSNSESSDDDSEEAPSTSGMGFHAPKIGSNGVEMAAKFPSGSQRA 269
E AE + ++ SEE + + + VE K S ++
Sbjct: 578 -----------EEAEAKEEKKVEEKSEEVATKEEL------VADAKVEKPEKAKSPVPKS 620
Query: 270 RVVNTDHGSPEQLQIPVTDSGRHILEDS-CAELGES-------KEHMESRMVTETEETQE 321
V + G + PV + G+ + S E G+S +E +S + E +
Sbjct: 621 PV--EEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKA 678
Query: 322 KKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEERENVAVAKLQESQPGNAVID 381
K K P+EE + A + K ++ EE E+ + AP+E + + +E +P +
Sbjct: 679 KSPVPKSPVEEAKSKAEVGKGEQKEEE---EKEVKEAPKEEK----VEKKEEKPKDVPEK 731
Query: 382 KETIDLLAFTSVAEL 396
K+ + +VAE+
Sbjct: 732 KKAESPVKEEAVAEV 746
Score = 33.5 bits (75), Expect = 0.40
Identities = 60/292 (20%), Positives = 105/292 (35%), Gaps = 49/292 (16%)
Query: 115 EKAMAEWVKQQAEREAEKEQKR--LERLQRKL--VEPKHCFTSPDYQQQCHEMAERLEDS 170
++ +AE+ +Q + E E R E L+R+L +E +H YQ ++ L
Sbjct: 314 KEEIAEYRRQLQSKSIELESVRGTKESLERQLSDIEERHNHDLSSYQDTIQQLENELR-- 371
Query: 171 VLKGMQAASSKMVSAEISENRKRQWPTKSQTDRGASAGKRRCFWLGMEGLETAEGSNSES 230
+K A + K D +A ++ +EG ET + + S
Sbjct: 372 --------GTKWEMARHLREYQDLLNVKMALDIEIAAYRKL-----LEGEETRFSTFAGS 418
Query: 231 SDDD--SEEAPSTSGMGFHAPKIGSNGVEMAAKFPSGSQRARVVNTDHGSPEQLQIPVTD 288
+ P T PK+ + +++ KF V + E+ +T+
Sbjct: 419 ITGPLYTHRPPITISSKIQKPKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEEALTAITE 478
Query: 289 SGRHILEDSCAELGESKEHMESRMVTET----------------EETQEKKAESKEPIEE 332
+++ E E KE E EE ++++ E +E EE
Sbjct: 479 ELAVSMKEEKKEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEE 538
Query: 333 EPTGAGLNK------------DKETEERTDGERVAEVAPEERENVAVAKLQE 372
E GA ++ +KE E+ +GE AE EE E K++E
Sbjct: 539 EDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEE 590
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 40.8 bits (94), Expect = 0.003
Identities = 68/315 (21%), Positives = 126/315 (40%), Gaps = 44/315 (13%)
Query: 93 EKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFT 152
EK+ EA ++ + EK A K++ E EAE+E+ ++ K P+
Sbjct: 89 EKSEMEEALTAITEELAVSMKEEKKEAAEEKEE-EPEAEEEEVAAKKSPVKATAPEVKEE 147
Query: 153 SPDYQQQCHEMAERLEDSVLKGMQA---ASSKMVSAEISENRKRQWPTKSQTDRGASAGK 209
+ +++ + E ED K QA S K S+E E + + T+++ +
Sbjct: 148 EGEKEEEEGQEEEEEEDEGAKSDQAEEGGSEKEGSSEKEEGEQEEGETEAEAEG------ 201
Query: 210 RRCFWLGMEGLETAEGSNSESSDDDSEEAPSTSGMGFHAPKIGSNGVEMAAKFPSGSQRA 269
E AE + ++ SEE + + + VE K S ++
Sbjct: 202 -----------EEAEAKEEKKVEEKSEEVATKEEL------VADAKVEKPEKAKSPVPKS 244
Query: 270 RVVNTDHGSPEQLQIPVTDSGRHILEDS-CAELGES-------KEHMESRMVTETEETQE 321
V + G + PV + G+ + S E G+S +E +S + E +
Sbjct: 245 PV--EEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVPKSPVEEKGKSPVSKSPVEEKA 302
Query: 322 KKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEERENVAVAKLQESQPGNAVID 381
K K P+EE + A + K ++ EE E+ + AP+E + + +E +P +
Sbjct: 303 KSPVPKSPVEEAKSKAEVGKGEQKEEE---EKEVKEAPKEEK----VEKKEEKPKDVPEK 355
Query: 382 KETIDLLAFTSVAEL 396
K+ + +VAE+
Sbjct: 356 KKAESPVKEEAVAEV 370
Score = 32.0 bits (71), Expect = 1.2
Identities = 35/162 (21%), Positives = 59/162 (36%), Gaps = 28/162 (17%)
Query: 239 PSTSGMGFHAPKIGSNGVEMAAKFPSGSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSC 298
P T PK+ + +++ KF V + E+ +T+ +++
Sbjct: 53 PITISSKIQKPKVEAPKLKVQHKFVEEIIEETKVEDEKSEMEEALTAITEELAVSMKEEK 112
Query: 299 AELGESKEHMESRMVTET----------------EETQEKKAESKEPIEEEPTGAGLNK- 341
E E KE E EE ++++ E +E EEE GA ++
Sbjct: 113 KEAAEEKEEEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQEEEEEEDEGAKSDQA 172
Query: 342 -----------DKETEERTDGERVAEVAPEERENVAVAKLQE 372
+KE E+ +GE AE EE E K++E
Sbjct: 173 EEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEE 214
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 40.0 bits (92), Expect = 0.004
Identities = 61/295 (20%), Positives = 111/295 (37%), Gaps = 32/295 (10%)
Query: 86 RALGAQIEKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLV 145
R L + K T + + RRL + + EW + E K++K+L R QRKL
Sbjct: 2088 RKLTQEEIKMTKMKRALFVKERRLSIEQSKLDIKEWDFSEKRSELTKDEKKLARKQRKLA 2147
Query: 146 EPKHCFTSPDYQ--QQCHEMAERLEDSVLKGMQAASSKMVSAEISENRKRQWPTKSQTDR 203
+ + + ++ ++A + + +L + + E+ KR+W + + R
Sbjct: 2148 NKMRRMINKEEKMTEEESKLARKHSEVILDDEEEGG--IEEEEVIPFLKRRWRKRKEAKR 2205
Query: 204 GASAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAPSTSGMGFHAPKIGSNGVEMAAKFP 263
G ++ +++ ES + SEE S ++ K
Sbjct: 2206 GDKPKEK----------FSSQVDEVESEEHFSEEMESL--------------LDELEKQE 2241
Query: 264 SGSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAELGESKEHMESRMVTE--TEETQE 321
S S + E+ ++ + R E+ + E +E + + E EE QE
Sbjct: 2242 SLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQVEKEEEEKKKKKKEKKKEEVQE 2301
Query: 322 KKA--ESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEERENVAVAKLQESQ 374
K+ E KE I E L+ ++E EE E + E + KLQE +
Sbjct: 2302 KEEVFEEKEEIMSEEETESLSDEEEEEESCSLEEEVDREKEILKKEKQFKLQEQR 2356
Score = 32.0 bits (71), Expect = 1.2
Identities = 55/253 (21%), Positives = 102/253 (40%), Gaps = 15/253 (5%)
Query: 122 VKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKGMQAASSK 181
++++ RE E++++++ QR + E +H + ++ E E+ L + ++
Sbjct: 1546 LEEEVSREGEEKEQQVTEEQRHIQE-EHKWARIHRKRARAEKKRAQEERKLAQEEEKLAQ 1604
Query: 182 MVSAEISENRK--RQWPTKSQTDRGASAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAP 239
E RK + + +Q DR + + + + ET + S + + A
Sbjct: 1605 EERQLAQEERKLAQAYVKITQDDREMAQAEGKF----AQKEETLAQRGEKLSQEAEKLAQ 1660
Query: 240 STSGMGFHAPKIGSNGVEMAAKFPSGSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCA 299
+ K+ ++A K G + A V N E+L P + E A
Sbjct: 1661 KRKKLAKKWEKVAREEEKLAKK---GGKLAEVKNILAQKVEEL--PQREQNLDWQEKELA 1715
Query: 300 -ELGESKEHMESRMVTETEETQE--KKAESKEPIEEEPTGAGLNKDKETEERTDGERVAE 356
EL E + ME E E QE K E K+ + EE ++K +EE T + E
Sbjct: 1716 QELEELEWDMEELSWKEEELNQEEGKLVEEKKKLAEEEEALAWQREKLSEEETKLAQEEE 1775
Query: 357 VAPEERENVAVAK 369
+ +E+E +A K
Sbjct: 1776 LLIQEKEKLAQHK 1788
Score = 28.9 bits (63), Expect = 10.0
Identities = 22/85 (25%), Positives = 35/85 (41%), Gaps = 2/85 (2%)
Query: 303 ESKEHMESRM--VTETEETQEKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPE 360
ES+EH M + + E QE + +E EE + +E EE E E
Sbjct: 2221 ESEEHFSEEMESLLDELEKQESLSSEEEEEREEEEEREEEEVREEEEERKEEEEGEEKQV 2280
Query: 361 ERENVAVAKLQESQPGNAVIDKETI 385
E+E K ++ + V +KE +
Sbjct: 2281 EKEEEEKKKKKKEKKKEEVQEKEEV 2305
>gi|42518068 trans-golgi network protein 2 [Homo sapiens]
Length = 437
Score = 39.7 bits (91), Expect = 0.006
Identities = 57/248 (22%), Positives = 95/248 (38%), Gaps = 31/248 (12%)
Query: 152 TSPDYQQQCHEMAERLEDSVLK-GMQAASSKMVSAEISENRKRQWPTKSQTDRGASAGKR 210
T+ D + H + +DS K G +A + + K Q + S++ A K
Sbjct: 118 TTKDSTSKSHPELQTPKDSTGKSGAEAQTPEDSPNRSGAEAKTQKDSPSKSGSEAQTTKD 177
Query: 211 RCFWLGMEGLETAEGSNSESSDDDS-EEAPSTSGMGFHAPKIGSN--GVEMAAKFPSGSQ 267
G +G +GS+ ++D + ++ P+ SG PK GSN G E S+
Sbjct: 178 VPNKSGADGQTPKDGSSKSGAEDQTPKDVPNKSGAEKQTPKDGSNKSGAEEQGPIDGPSK 237
Query: 268 RARVVNTDHGSPEQL---QIPVTDSGRHILEDS------------CAELGESKEH---ME 309
T SP ++ Q D + I S A+ G+ H E
Sbjct: 238 SGAEEQTSKDSPNKVVPEQPSRKDHSKPISNPSDNKELPKADTNQLADKGKLSPHAFKTE 297
Query: 310 SRMVTETEETQEKKAESKEPIEE-EPTGAGLNKDKETEERTDGERVAEVAPEERENVAVA 368
S T+ +++ +S EP E+ EP KE E+ G EE+E ++ +
Sbjct: 298 SGEETDLISPPQEEVKSSEPTEDVEP--------KEAEDDDTGPEEGSPPKEEKEKMSGS 349
Query: 369 KLQESQPG 376
E++ G
Sbjct: 350 ASSENREG 357
Score = 30.8 bits (68), Expect = 2.6
Identities = 35/165 (21%), Positives = 70/165 (42%), Gaps = 12/165 (7%)
Query: 221 ETAEGSNSESSDDDS--EEAPSTSGMGFHAPKIGSNGVEMAAKFP------SGSQRARVV 272
+T + S S+SS + E+ P+ SG K SN AK SGS+
Sbjct: 61 QTPKDSPSKSSAEAQTPEDTPNKSGAEAKTQKDSSNKSGAEAKTQKGSTSKSGSEAQTTK 120
Query: 273 NTDHGSPEQLQIPVTDSGRHILEDSCAELGESKEHMESRMVTETEETQEKKAESKEPIEE 332
++ S +LQ P +G+ E E ++ E++ ++ +A++ + +
Sbjct: 121 DSTSKSHPELQTPKDSTGKSGAEAQTPEDSPNRSGAEAKTQKDSPSKSGSEAQTTKDVPN 180
Query: 333 EPTGAGLNKDKETEERTDGERVAEVAPEERENVAVAKLQESQPGN 377
+ +GA K+ ++ E + P++ N + A+ Q + G+
Sbjct: 181 K-SGADGQTPKDGSSKSGAE---DQTPKDVPNKSGAEKQTPKDGS 221
>gi|119220598 apolipoprotein B48 receptor [Homo sapiens]
Length = 1088
Score = 39.7 bits (91), Expect = 0.006
Identities = 40/162 (24%), Positives = 63/162 (38%), Gaps = 19/162 (11%)
Query: 200 QTDRGASAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAPSTSGMGFHAPKIGSNGVEMA 259
QT+ GA G+R G + EG D E S +G+ E A
Sbjct: 379 QTEYGAVPGERLLEATGKVWVLEEEG--------DEEREAEVSPFPKQPQVLGTERTEEA 430
Query: 260 AKFPSGSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAELGESKEHMESRMVTETEET 319
A+ + + A V + G + Q+ + + +D LG + + + EE
Sbjct: 431 AESQTAGREA-VGGQEAGESFEGQVDLRGKEAEMRQD----LGIRADRARMEELVQAEEA 485
Query: 320 QEKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEE 361
QE++ S++P+ E P+ D E E D E E PEE
Sbjct: 486 QEERGSSRDPVAELPS------DGEAEGTADLEATPEARPEE 521
>gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens]
Length = 543
Score = 39.3 bits (90), Expect = 0.007
Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 7/95 (7%)
Query: 274 TDHGSPEQLQIPVTDSGRHILE--DSCAELGESKEHMESRMVTETEETQEK----KAESK 327
T H EQ+++ T E D GE++E + + E EE E+ K ES+
Sbjct: 444 TSHVQEEQIEVEETIEAAKAEEAKDEPPSEGEAEEEEKDKEEAEEEEAAEEEEAAKEESE 503
Query: 328 EPIEEEPTGAGLNKDKETEERTDGERVAEVAPEER 362
E EEE G G + +ET+E + E+ E A EE+
Sbjct: 504 EAKEEEEGGEG-EEGEETKEAEEEEKKVEGAGEEQ 537
>gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo
sapiens]
Length = 956
Score = 38.9 bits (89), Expect = 0.010
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 3/72 (4%)
Query: 303 ESKEHMESRMVTETEETQEKKAESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEER 362
E KE ++ EE ++KK E KE E+E ++K+ +E+ + +R+ E +ER
Sbjct: 355 EEKEKLKEEAKRAKEEAKKKKEEEKELKEKERRE---KREKDEKEKAEKQRLKEERRKER 411
Query: 363 ENVAVAKLQESQ 374
+ AKL+E +
Sbjct: 412 QEALEAKLEEKR 423
>gi|224589071 BMS1-like, ribosome assembly protein [Homo sapiens]
Length = 1282
Score = 38.5 bits (88), Expect = 0.013
Identities = 35/143 (24%), Positives = 56/143 (39%), Gaps = 2/143 (1%)
Query: 222 TAEGSNSESSDDDSEEAPSTSG-MGFHAPKIGSNGVEMAAKFPSGSQRARVVNTDHGSPE 280
+AE +E +D+ SEE T+G G K G A P+ Q RV +
Sbjct: 512 SAEEGEAEEADESSEEEDCTAGEKGISGSKAAGEG-SKAGLSPANCQSDRVNLEKSLLMK 570
Query: 281 QLQIPVTDSGRHILEDSCAELGESKEHMESRMVTETEETQEKKAESKEPIEEEPTGAGLN 340
+ +P DSG E+ A ES+E E E +E + + +G L
Sbjct: 571 KAALPTFDSGHCTAEEVFASEDESEESSSLSAEEEDSENEEAIRKKLSKPSQVSSGQKLG 630
Query: 341 KDKETEERTDGERVAEVAPEERE 363
+E +D E + + + +E
Sbjct: 631 PQNFIDETSDIENLLKEEEDYKE 653
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 38.1 bits (87), Expect = 0.016
Identities = 63/278 (22%), Positives = 100/278 (35%), Gaps = 52/278 (18%)
Query: 98 REACRDLSGRRLRDVNHEKAMAEWVKQQ----AEREAEKEQKRLERLQRKLVEPKHCFTS 153
+E R+ R+ +KA EW +Q+ A + +E+ RLE+L+RK +
Sbjct: 114 KEKEREHERRKRHREEQDKARREWERQKRREMAREHSRRERDRLEQLERKRERERKMREQ 173
Query: 154 PDYQQQCHEMAERLEDSVLKGMQAASSKMVSAEISENRKRQWPTK---SQTDRGASAGKR 210
Q++ E R E+ + + + + VSA + + K S R R
Sbjct: 174 QKEQREQKERERRAEE---RRKEREARREVSAH-HRTMREDYSDKVKASHWSRSPPRPPR 229
Query: 211 RCFWLGMEGLETAEGSNSESSD------DDSEEAPSTSGMGFHAPKIGSNGVEMAAKFPS 264
F LG +G + + E D D S+ TS + + GS
Sbjct: 230 ERFELG-DGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGS----------- 277
Query: 265 GSQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAELGESKEHMESRMVTETEETQEKKA 324
GS E+ + E+ E G + E E E EE +E +
Sbjct: 278 ------------GSEEEEE----------EEEEEEEEGSTSEESEEEEEEEEEEEEETGS 315
Query: 325 ESKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPEER 362
S+E E+ + E EER + E V PE R
Sbjct: 316 NSEEASEQSAEEVSEEEMSEDEER-ENENHLLVVPESR 352
Score = 35.4 bits (80), Expect = 0.11
Identities = 72/331 (21%), Positives = 113/331 (34%), Gaps = 58/331 (17%)
Query: 93 EKTTNREACRDLSGRRL-------RDVNHEKAMAEWVKQQAE---REAEKEQKRLERLQR 142
E+ RE R+ S R R E+ M E K+Q E RE E++R ER R
Sbjct: 138 ERQKRREMAREHSRRERDRLEQLERKRERERKMREQQKEQREQKERERRAEERRKEREAR 197
Query: 143 KLVEPKHCFTSPDYQQQC----------------------------HEMAER-------- 166
+ V H DY + +M ER
Sbjct: 198 REVSAHHRTMREDYSDKVKASHWSRSPPRPPRERFELGDGRKPVKEEKMEERDLLSDLQD 257
Query: 167 LEDSVLKGMQAASSKMVSAEISENRKRQWPTKSQTDRGASAGKRRCFWLGMEGLETAEGS 226
+ DS K A SS S SE + + + + + G+++ + E E GS
Sbjct: 258 ISDSERKTSSAESSSAESGSGSEEEEEE--EEEEEEEGSTSEESEEEEEEEEEEEEETGS 315
Query: 227 NSESSDDDSEEAPSTSGMGFHAPKIGSNGV----EMAAKFPSGSQRARVVNTDHGSPEQL 282
NSE + + S E S M + N + E SG G+P
Sbjct: 316 NSEEASEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTP--- 372
Query: 283 QIPVTDSGRHILEDSCAELGESKEHMESRMVTETEETQEKKAESKEPIEEEPTGAGLN-K 341
Q G ++ + E K+ + + ++ + IEE G K
Sbjct: 373 QSSALTEGDYVPDSPALSPIELKQELPKYLPALQGCRSVEEFQCLNRIEEGTYGVVYRAK 432
Query: 342 DKETEERTDGERVAEVAPEERENVAVAKLQE 372
DK+T+E +R+ +E+E + L+E
Sbjct: 433 DKKTDEIVALKRLK--MEKEKEGFPITSLRE 461
>gi|4505257 moesin [Homo sapiens]
Length = 577
Score = 37.7 bits (86), Expect = 0.021
Identities = 61/280 (21%), Positives = 110/280 (39%), Gaps = 54/280 (19%)
Query: 115 EKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKG 174
E+AM E K++ E AEKE++++ER + +L+E ++Q + + LE+ +
Sbjct: 319 ERAMLENEKKKREM-AEKEKEKIEREKEELME-----RLKQIEEQTKKAQQELEEQTRRA 372
Query: 175 MQAASSKMVSAEISENRKRQWPTKSQTDRGASAGKRRCFWLGMEGLETAEGSNSESSDDD 234
+ E+ + RKR +Q++ A +R+ E E E S D
Sbjct: 373 L----------ELEQERKR-----AQSEAEKLAKERQ------EAEEAKEALLQASRDQK 411
Query: 235 SEEAPSTSGMGFHAPKIGSNGVEMA-----AKFPSGSQRARVVNTDHGSPEQLQIPVTDS 289
+ M +I +EMA ++ Q+A++V D
Sbjct: 412 KTQEQLALEMAELTARISQ--LEMARQKKESEAVEWQQKAQMVQED-------------- 455
Query: 290 GRHILEDSCAEL--GESKEHMESRMVTETEETQEKKAESKEPIEEEPTGAGLNKDKETEE 347
LE + AEL S H+ E +E E AE+ + + ++++ T E
Sbjct: 456 ----LEKTRAELKTAMSTPHVAEPAENEQDEQDENGAEASADLRADAMAKDRSEEERTTE 511
Query: 348 RTDGERVAEVAPEERENVAVAKLQESQPGNAVIDKETIDL 387
ERV + +A A+ + + N +I E + L
Sbjct: 512 AEKNERVQKHLKALTSELANARDESKKTANDMIHAENMRL 551
>gi|62243374 MAD1-like 1 protein [Homo sapiens]
Length = 718
Score = 37.7 bits (86), Expect = 0.021
Identities = 74/324 (22%), Positives = 131/324 (40%), Gaps = 42/324 (12%)
Query: 110 RDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLED 169
R+V+ + + ++Q EREA E+K E+L+R + C QQ ++RL +
Sbjct: 98 REVDRNQELLTRIRQLQEREAGAEEKMQEQLERN----RQC------QQNLDAASKRLRE 147
Query: 170 SVLKGMQAASSKMVSAEISENRKRQWPTKSQTDR--GASAGKRRCFWLGMEGLETAEGSN 227
+ A + + ++A + QW Q R + K+ E L+
Sbjct: 148 K--EDSLAQAGETINALKGRISELQWSVMDQEMRVKRLESEKQEL----QEQLDLQHKKC 201
Query: 228 SESSDDDSEEAPSTSGMGFHAPKIGSNGVEMAAKFPSGSQRARVVNTDHGSPEQLQIPVT 287
E++ E S H +I ++ K Q A +V + E +++P
Sbjct: 202 QEANQKIQELQASQEARADHEQQI----KDLEQKLSLQEQDAAIVK--NMKSELVRLPRL 255
Query: 288 DSGRHILEDSCAELGESKEHMESRMVTETEETQEKKAESKEPIEEEPTGAGLNKDK---- 343
+ L + A L E +E + ++ E E ++K +E ++E G L ++
Sbjct: 256 ERELKQLREESAHLREMRE--TNGLLQEELEGLQRKLGRQEKMQETLVGLELENERLLAK 313
Query: 344 -ETEERTDGERVAEVAPEERENVAVAKLQESQPGNAVIDKETIDLLAFTSVAELELLGLE 402
++ ER D + E + V +LQ+ + A+ DK + A TS A GLE
Sbjct: 314 LQSWERLDQTMGLSIRTPEDLSRFVVELQQRE--LALKDKNS----AVTSSAR----GLE 363
Query: 403 KLKCELM-ALGLKCGGTLQERAAR 425
K + +L L G L+ER R
Sbjct: 364 KARQQLQEELRQVSGQLLEERKKR 387
>gi|62243369 MAD1-like 1 protein [Homo sapiens]
Length = 718
Score = 37.7 bits (86), Expect = 0.021
Identities = 74/324 (22%), Positives = 131/324 (40%), Gaps = 42/324 (12%)
Query: 110 RDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLED 169
R+V+ + + ++Q EREA E+K E+L+R + C QQ ++RL +
Sbjct: 98 REVDRNQELLTRIRQLQEREAGAEEKMQEQLERN----RQC------QQNLDAASKRLRE 147
Query: 170 SVLKGMQAASSKMVSAEISENRKRQWPTKSQTDR--GASAGKRRCFWLGMEGLETAEGSN 227
+ A + + ++A + QW Q R + K+ E L+
Sbjct: 148 K--EDSLAQAGETINALKGRISELQWSVMDQEMRVKRLESEKQEL----QEQLDLQHKKC 201
Query: 228 SESSDDDSEEAPSTSGMGFHAPKIGSNGVEMAAKFPSGSQRARVVNTDHGSPEQLQIPVT 287
E++ E S H +I ++ K Q A +V + E +++P
Sbjct: 202 QEANQKIQELQASQEARADHEQQI----KDLEQKLSLQEQDAAIVK--NMKSELVRLPRL 255
Query: 288 DSGRHILEDSCAELGESKEHMESRMVTETEETQEKKAESKEPIEEEPTGAGLNKDK---- 343
+ L + A L E +E + ++ E E ++K +E ++E G L ++
Sbjct: 256 ERELKQLREESAHLREMRE--TNGLLQEELEGLQRKLGRQEKMQETLVGLELENERLLAK 313
Query: 344 -ETEERTDGERVAEVAPEERENVAVAKLQESQPGNAVIDKETIDLLAFTSVAELELLGLE 402
++ ER D + E + V +LQ+ + A+ DK + A TS A GLE
Sbjct: 314 LQSWERLDQTMGLSIRTPEDLSRFVVELQQRE--LALKDKNS----AVTSSAR----GLE 363
Query: 403 KLKCELM-ALGLKCGGTLQERAAR 425
K + +L L G L+ER R
Sbjct: 364 KARQQLQEELRQVSGQLLEERKKR 387
>gi|62243332 MAD1-like 1 protein [Homo sapiens]
Length = 718
Score = 37.7 bits (86), Expect = 0.021
Identities = 74/324 (22%), Positives = 131/324 (40%), Gaps = 42/324 (12%)
Query: 110 RDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLED 169
R+V+ + + ++Q EREA E+K E+L+R + C QQ ++RL +
Sbjct: 98 REVDRNQELLTRIRQLQEREAGAEEKMQEQLERN----RQC------QQNLDAASKRLRE 147
Query: 170 SVLKGMQAASSKMVSAEISENRKRQWPTKSQTDR--GASAGKRRCFWLGMEGLETAEGSN 227
+ A + + ++A + QW Q R + K+ E L+
Sbjct: 148 K--EDSLAQAGETINALKGRISELQWSVMDQEMRVKRLESEKQEL----QEQLDLQHKKC 201
Query: 228 SESSDDDSEEAPSTSGMGFHAPKIGSNGVEMAAKFPSGSQRARVVNTDHGSPEQLQIPVT 287
E++ E S H +I ++ K Q A +V + E +++P
Sbjct: 202 QEANQKIQELQASQEARADHEQQI----KDLEQKLSLQEQDAAIVK--NMKSELVRLPRL 255
Query: 288 DSGRHILEDSCAELGESKEHMESRMVTETEETQEKKAESKEPIEEEPTGAGLNKDK---- 343
+ L + A L E +E + ++ E E ++K +E ++E G L ++
Sbjct: 256 ERELKQLREESAHLREMRE--TNGLLQEELEGLQRKLGRQEKMQETLVGLELENERLLAK 313
Query: 344 -ETEERTDGERVAEVAPEERENVAVAKLQESQPGNAVIDKETIDLLAFTSVAELELLGLE 402
++ ER D + E + V +LQ+ + A+ DK + A TS A GLE
Sbjct: 314 LQSWERLDQTMGLSIRTPEDLSRFVVELQQRE--LALKDKNS----AVTSSAR----GLE 363
Query: 403 KLKCELM-ALGLKCGGTLQERAAR 425
K + +L L G L+ER R
Sbjct: 364 KARQQLQEELRQVSGQLLEERKKR 387
>gi|186700623 Rab-like GTP-binding protein 1 isoform 1 [Homo
sapiens]
Length = 729
Score = 37.4 bits (85), Expect = 0.028
Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 17/175 (9%)
Query: 220 LETAEGSNSESSDDDSEEAPSTSGMGF-----HAPKIGSNGVEMAAKFPSGSQRARVVNT 274
+E +G + SS+ D E + + F GS+ A FP + V +
Sbjct: 542 MEPGKGEQASSSESDPEGPIAAQMLSFVMDDPDFESEGSDTQRRADDFPVRDDPSDVTDE 601
Query: 275 DHGS-----PEQLQIPV--TDSGRHILEDSCAELGESKEHMESRMVTETEETQEKKAESK 327
D G P +L +P + + E G KE E +T ++KK + K
Sbjct: 602 DEGPAEPPPPPKLPLPAFRLKNDSDLFGLGLEEAGP-KESSEEGKEGKTPSKEKKKKKKK 660
Query: 328 EPIEEEPTGAGLNKDKETEERTDGE----RVAEVAPEERENVAVAKLQESQPGNA 378
EEE +K K+++++ +G+ R + P RE A +L+ G A
Sbjct: 661 GKEEEEKAAKKKSKHKKSKDKEEGKEERRRRQQRPPRSRERTAADELEAFLGGGA 715
>gi|4504487 histidine rich calcium binding protein precursor [Homo
sapiens]
Length = 699
Score = 37.4 bits (85), Expect = 0.028
Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 288 DSGRHILEDSCAELGESKEHMESRMVTETEETQEKKAESKEPIEEEPTGAGLNKDKETEE 347
D G H +D +E GE H SR + E+ +E S EEE +++E EE
Sbjct: 491 DPGSHEEDDESSEQGEKGTHHGSRDQEDEEDEEEGHGLSLNQEEEEEEDKEEEEEEEDEE 550
Query: 348 RTDGERVAEVAP-----EERENVAVAKLQESQPGNAVI 380
R + ER AP E E L+E +P +I
Sbjct: 551 RRE-ERAEVGAPLSPDHSEEEEEEEEGLEEDEPRFTII 587
>gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]
Length = 888
Score = 37.4 bits (85), Expect = 0.028
Identities = 44/165 (26%), Positives = 67/165 (40%), Gaps = 27/165 (16%)
Query: 206 SAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAPSTSGMGFHAPKIGSNGVEMAAKFPSG 265
S+ +R+ L LE + +S+ SD +A + G G NG E A+K
Sbjct: 4 SSKRRQVKPLAASLLEALDYDSSDDSDFKVGDASDSEGSG--------NGSEDASK---- 51
Query: 266 SQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAELGESKEHMESRMVTETEETQEKKAE 325
++ GS +DS +ILE+ E + KE E + EK+
Sbjct: 52 -------DSGEGS-------CSDSEENILEEELNEDIKVKEEQLKNSAEEEVLSSEKQLI 97
Query: 326 SKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPE-ERENVAVAK 369
E EEE G K KE E+ + E+ E E E+E V++
Sbjct: 98 KMEKKEEEENGERPRKKKEKEKEKEKEKEKEKEREKEKEKATVSE 142
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 37.4 bits (85), Expect = 0.028
Identities = 53/270 (19%), Positives = 101/270 (37%), Gaps = 12/270 (4%)
Query: 93 EKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFT 152
E+ RE RD + R++ E+A +++ ER+ E+++ R +R+ +
Sbjct: 688 ERERERERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERERDREK 747
Query: 153 SPDYQQQCHEMAERLEDSVLKGMQAASSKMVSAEISENRKRQW--PTKSQTDRGASAGKR 210
+ +++ E E + + + + R+R W K + DR +
Sbjct: 748 EREREREERERERERERERERERERERERARERDKERERQRDWEDKDKGRDDRREKREEI 807
Query: 211 RCFWLGMEGLETAEGSNSESSDDDSEEAPSTSGMGFHAPKIG--SNGVEMAAKFPSGSQR 268
R +G + + ++ S H+P ++G + K SQ
Sbjct: 808 REDRNPRDGHDERKSKKRYRNEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHRLLSQV 867
Query: 269 ARVVNTDHGSPEQLQIPVTDSGRHILEDSCAELGESKEHMESRMVTETEETQEKKAESKE 328
R + SP L GR ED E ES E + + E + +K+ E E
Sbjct: 868 VRPQESRSLSPSHL--TEDRQGRWKEEDRKPERKESSRRYEEQELKEKVSSVDKQREQTE 925
Query: 329 PIE------EEPTGAGLNKDKETEERTDGE 352
+E ++ G ++D+ET +R E
Sbjct: 926 ILESSRMRAQDIIGHHQSEDRETSDRAHDE 955
Score = 35.0 bits (79), Expect = 0.14
Identities = 50/282 (17%), Positives = 100/282 (35%), Gaps = 28/282 (9%)
Query: 93 EKTTNREACRDLSGRRLRDVNHEKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFT 152
++ R RD R R+ E+ +++ ERE E+E+ R +R+ +
Sbjct: 670 DRRDERARERDRERERDRERERERERERDREREKERELERERAREREREREKERDRERDR 729
Query: 153 SPDYQQQCHEMAERLEDSVLKGMQAASSKMVSAEISENRKRQWPTKSQTDRGASAGKRRC 212
D+ ++ ER + + + + E R+R+ + + +R K R
Sbjct: 730 DRDHDRERERERERDREKEREREREERER----ERERERERERERERERERARERDKERE 785
Query: 213 FWLGMEGLETAEGSNSESSDDDSEEAPSTSGMGFHAPKIGSNGVEMAAKFPSGSQRARVV 272
E + E ++ E+ G ++++
Sbjct: 786 RQRDWEDKDKGRDDRREKREEIREDRNPRDG--------------------HDERKSKKR 825
Query: 273 NTDHGSPEQLQIPVTDSGRHILEDSCAELGESKEHMESRMVTETEETQEKKAESKEPIEE 332
+ GSP Q P R DS A ++ + R++++ QE ++ S + E
Sbjct: 826 YRNEGSPSPRQSP--KRRREHSPDSDAYNSGDDKNEKHRLLSQVVRPQESRSLSPSHLTE 883
Query: 333 EPTGAGLNKDKETEERTDGERVAEVAPEERENVAVAKLQESQ 374
+ G +D++ E + R E E +E V+ Q Q
Sbjct: 884 DRQGRWKEEDRKPERKESSRRYEE--QELKEKVSSVDKQREQ 923
>gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens]
Length = 948
Score = 37.4 bits (85), Expect = 0.028
Identities = 44/165 (26%), Positives = 67/165 (40%), Gaps = 27/165 (16%)
Query: 206 SAGKRRCFWLGMEGLETAEGSNSESSDDDSEEAPSTSGMGFHAPKIGSNGVEMAAKFPSG 265
S+ +R+ L LE + +S+ SD +A + G G NG E A+K
Sbjct: 4 SSKRRQVKPLAASLLEALDYDSSDDSDFKVGDASDSEGSG--------NGSEDASK---- 51
Query: 266 SQRARVVNTDHGSPEQLQIPVTDSGRHILEDSCAELGESKEHMESRMVTETEETQEKKAE 325
++ GS +DS +ILE+ E + KE E + EK+
Sbjct: 52 -------DSGEGS-------CSDSEENILEEELNEDIKVKEEQLKNSAEEEVLSSEKQLI 97
Query: 326 SKEPIEEEPTGAGLNKDKETEERTDGERVAEVAPE-ERENVAVAK 369
E EEE G K KE E+ + E+ E E E+E V++
Sbjct: 98 KMEKKEEEENGERPRKKKEKEKEKEKEKEKEKEREKEKEKATVSE 142
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 37.0 bits (84), Expect = 0.037
Identities = 57/259 (22%), Positives = 101/259 (38%), Gaps = 34/259 (13%)
Query: 115 EKAMAEWVKQQAEREAEKEQKRLERLQRKLVEPKHCFTSPDYQQQCHEMAERLEDSVLKG 174
++A+A+ +K++ ER+ +E++R++RL+ A+R E+ L+
Sbjct: 345 QEALAK-LKEEEERQKREEEERIKRLEEL-------------------EAKRKEEERLEQ 384
Query: 175 MQAASSKMVSAEISENRKRQWPTKSQTDRGASAGKRRCFWLGMEGLETAEGSNSESSDDD 234
+ K E E K++ +++ R A A L A+G S D
Sbjct: 385 EKRERKKQKEKERKERLKKEGKLLTKSQREARARAEATL-----KLLQAQGVEVPSKDSL 439
Query: 235 SEEAPSTSGMGFHAPKIGSNGVEMAAKFPSGSQR--ARVVNTDHGSPEQLQIP--VTDSG 290
++ P + K ++ +K S S A V + G PE+ + P V
Sbjct: 440 PKKRPI-----YEDKKRKKIPQQLESKEVSESMELCAAVEVMEQGVPEKEETPPPVEPEE 494
Query: 291 RHILEDSCAELGESKEHMESRMVTETEETQEKKAESKEPIEEEPTGAGLNKDKETEERTD 350
ED+ + E+ E E + + E+ E EEE +++ E EE +
Sbjct: 495 EEDTEDAGLDDWEAMASDEETEKVEGNKVHIEVKENPEEEEEEEEEEEEDEESEEEEEEE 554
Query: 351 GERVAEVAPEERENVAVAK 369
GE EE E V+ K
Sbjct: 555 GESEGSEGDEEDEKVSDEK 573
Score = 30.0 bits (66), Expect = 4.5
Identities = 59/280 (21%), Positives = 98/280 (35%), Gaps = 40/280 (14%)
Query: 164 AERLEDSVLKGMQAASSK--MVSAEISENRKRQWPTKSQTDRGASAGKRRCFWLGMEGLE 221
+E LED K + A K M S ++ + P K++ A K W G E E
Sbjct: 113 SEELEDKDSKSKKTAKPKVEMYSGSDDDDDFNKLPKKAK----GKAQKSNKKWDGSEEDE 168
Query: 222 TAE---------GSNSESSDDDSEEAPSTSGMGFHAPKIGSNGVEMAAKFPSGSQRARVV 272
S+ ES D+ E S G + +E + S + + V
Sbjct: 169 DNSKKIKERSRINSSGESGDESDEFLQSRKGQKKNQKNKPGPNIESGNEDDDASFKIKTV 228
Query: 273 NTDHGSPEQLQIPVTDSG----RHILEDSCAELGESKEHMESRMVTETEE---------- 318
++ + D R + E E G+ + + + EE
Sbjct: 229 AQKKAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQSKQKESQRKFEEETVKSKVTVD 288
Query: 319 -----TQEKKAESKEPIEEEPTGAGLNKDKETE--ERTDGERVAEVAPEERE----NVAV 367
E+KAE+ E++ G KDK+ + E+ + E+ + P + A+
Sbjct: 289 TGVIPASEEKAETPTAAEDDNEGDKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAMQEAL 348
Query: 368 AKLQESQPGNAVIDKETIDLLAFTSVAELELLGLEKLKCE 407
AKL+E + ++E I L E LE+ K E
Sbjct: 349 AKLKEEEERQKREEEERIKRLEELEAKRKEEERLEQEKRE 388
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,517,679
Number of Sequences: 37866
Number of extensions: 819646
Number of successful extensions: 5760
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 289
Number of HSP's that attempted gapping in prelim test: 4640
Number of HSP's gapped (non-prelim): 1179
length of query: 451
length of database: 18,247,518
effective HSP length: 106
effective length of query: 345
effective length of database: 14,233,722
effective search space: 4910634090
effective search space used: 4910634090
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.