LOC283116 8339

Name: LOC283116	Sequence: fasta or formatted (452aa)		NCBI GI: 169203362
Description: PREDICTED: similar to ring finger protein 18		Referenced in: Tripartite Motif Family
Other entries for this name: alt mRNA [452aa] PREDICTED: similar to ring finger protein 18 isoform 1 alt prot [446aa] PREDICTED: similar to ring finger protein 18 isoform 2 alt prot [452aa] PREDICTED: similar to ring finger protein 18
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.0 18 2 C cysteine 5.3 24 2 D aspartate 4.2 19 1 E glutamate 7.7 35 3 F phenylalanine 5.3 24 1 G glycine 4.0 18 1 H histidine 5.1 23 2 I isoleucine 5.3 24 1 K lysine 6.0 27 3 L leucine 10.6 48 2 M methionine 3.3 15 1 N asparagine 4.6 21 1 P proline 4.4 20 2 Q glutamine 4.2 19 1 R arginine 5.8 26 2 S serine 7.1 32 3 T threonine 4.4 20 2 V valine 4.2 19 1 W tryptophan 2.0 9 1 Y tyrosine 2.4 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to ring finger protein 18 LOC283116 1.000 PREDICTED: similar to ring finger protein 18 isofor... LOC283116 0.999 PREDICTED: similar to ring finger protein 18 LOC653111 0.948 PREDICTED: similar to ring finger protein 18 TRIM49 0.945 ring finger protein 18 LOC729384 0.835 hypothetical protein LOC729384 LOC100134006 0.835 PREDICTED: similar to ring finger protein 18 isofor... LOC399939 0.835 PREDICTED: similar to ring finger protein 18 LOC100131392 0.835 PREDICTED: similar to ring finger protein 18 LOC399939 0.835 PREDICTED: similar to ring finger protein 18 SPRYD5 0.755 SPRY domain containing 5 LOC283116 0.723 PREDICTED: similar to ring finger protein 18 isofor... LOC120824 0.710 PREDICTED: similar to hCG1802386 LOC120824 0.710 PREDICTED: similar to hCG1802386 LOC120824 0.710 PREDICTED: similar to hCG1802386 TRIM53 0.529 tripartite motif-containing 53 LOC642425 0.529 tripartite motif-containing 53-like LOC642425 0.529 PREDICTED: tripartite motif-containing 53-like [Hom... LOC340970 0.518 PREDICTED: similar to tripartite motif-containing 5... LOC340970 0.518 PREDICTED: similar to tripartite motif-containing 5... LOC340970 0.517 PREDICTED: similar to tripartite motif-containing 5... TRIM43 0.467 tripartite motif-containing 43 LOC653192 0.458 PREDICTED: Tripartite motif-containing protein 43-li... LOC642446 0.385 PREDICTED: tripartite motif-containing protein 64B-... TRIM64 0.384 tripartite motif-containing 64 LOC646754 0.359 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.359 PREDICTED: tripartite motif-containing protein 64C-... LOC646754 0.359 PREDICTED: tripartite motif-containing protein 64C-... LOC100289112 0.353 PREDICTED: hypothetical protein XP_002343148 TRIM77 0.353 tripartite motif-containing 77 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.