BXDC5 4054

Name: BXDC5	Sequence: fasta or formatted (349aa)		NCBI GI: 145275210
Description: RNA processing factor 1		Referenced in: Nucleus and Nucleolus
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.9 24 3 C cysteine 0.6 2 1 D aspartate 4.9 17 1 E glutamate 6.6 23 2 F phenylalanine 5.4 19 2 G glycine 5.7 20 1 H histidine 3.4 12 1 I isoleucine 6.0 21 2 K lysine 10.3 36 3 L leucine 6.9 24 1 M methionine 1.4 5 1 N asparagine 3.7 13 2 P proline 6.3 22 2 Q glutamine 4.3 15 3 R arginine 8.6 30 2 S serine 6.0 21 4 T threonine 6.0 21 2 V valine 3.7 13 1 W tryptophan 0.6 2 1 Y tyrosine 2.6 9 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 RNA processing factor 1 IMP4 0.149 IMP4, U3 small nucleolar ribonucleoprotein, homolog ... BXDC2 0.028 BRIX TCOF1 0.015 Treacher Collins-Franceschetti syndrome 1 isoform f... TCOF1 0.015 Treacher Collins-Franceschetti syndrome 1 isoform e... TCOF1 0.015 Treacher Collins-Franceschetti syndrome 1 isoform d... TCOF1 0.015 Treacher Collins-Franceschetti syndrome 1 isoform b ... TCOF1 0.015 Treacher Collins-Franceschetti syndrome 1 isoform a ... ESF1 0.013 ABT1-associated protein HMGB1 0.012 high-mobility group box 1 SRPR 0.012 signal recognition particle receptor HMGB1L1 0.012 high-mobility group box 1-like 1 PTPRE 0.010 protein tyrosine phosphatase, receptor type, E isofor... PTPRE 0.010 protein tyrosine phosphatase, receptor type, E isofo... ZNF192 0.010 zinc finger protein 192 SP100 0.010 nuclear antigen Sp100 isoform 2 CAMSAP1L1 0.010 calmodulin regulated spectrin-associated protein 1-l... LOC100292062 0.009 PREDICTED: hypothetical protein XP_002346314 LOC100133599 0.009 PREDICTED: hypothetical protein PCLO 0.009 piccolo isoform 2 PCLO 0.009 piccolo isoform 1 BZRAP1 0.009 peripheral benzodiazepine receptor-associated prote... BZRAP1 0.009 peripheral benzodiazepine receptor-associated prote... TMEM198 0.009 transmembrane protein 198 PRKCE 0.009 protein kinase C, epsilon BAZ2A 0.009 bromodomain adjacent to zinc finger domain, 2A [Homo... HMGB2 0.007 high-mobility group box 2 HMGB2 0.007 high-mobility group box 2 HMGB2 0.007 high-mobility group box 2 ERN2 0.007 endoplasmic reticulum to nucleus signalling 2 [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.