Guide to the Human Genome
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Name: PTPRE Sequence: fasta or formatted (700aa) NCBI GI: 5729993
Description:

protein tyrosine phosphatase, receptor type, E isoform 1 precursor

Referenced in:

Protein Tyrosine Phosphatases

Other entries for this name:
alt prot [642aa] protein tyrosine phosphatase, receptor type, E isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         37           2
 C cysteine            1.9         13           1
 D aspartate           4.9         34           2
 E glutamate           7.1         50           3
 F phenylalanine       4.9         34           2
 G glycine             5.4         38           1
 H histidine           2.7         19           1
 I isoleucine          6.6         46           2
 K lysine              5.9         41           2
 L leucine             8.9         62           6
 M methionine          3.0         21           2
 N asparagine          3.9         27           1
 P proline             5.3         37           2
 Q glutamine           6.4         45           4
 R arginine            5.6         39           1
 S serine              4.7         33           2
 T threonine           6.0         42           4
 V valine              6.7         47           2
 W tryptophan          1.6         11           1
 Y tyrosine            3.4         24           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein tyrosine phosphatase, receptor type, E isofor... 
PTPRE                 0.903   protein tyrosine phosphatase, receptor type, E isofo...
PTPRA                 0.651   protein tyrosine phosphatase, receptor type, A isofo...
PTPRA                 0.651   protein tyrosine phosphatase, receptor type, A isofo...
PTPRA                 0.650   protein tyrosine phosphatase, receptor type, A isofor...
PTPRF                 0.385   protein tyrosine phosphatase, receptor type, F isof...
PTPRF                 0.385   protein tyrosine phosphatase, receptor type, F isof...
PTPRD                 0.379   protein tyrosine phosphatase, receptor type, D isof...
PTPRD                 0.378   protein tyrosine phosphatase, receptor type, D isofor...
PTPRD                 0.378   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.378   protein tyrosine phosphatase, receptor type, D isofo...
PTPRD                 0.378   protein tyrosine phosphatase, receptor type, D isofo...
PTPRS                 0.375   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.375   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.375   protein tyrosine phosphatase, receptor type, sigma ...
PTPRS                 0.373   protein tyrosine phosphatase, receptor type, sigma ...
PTPRC                 0.294   protein tyrosine phosphatase, receptor type, C isofo...
PTPRC                 0.294   protein tyrosine phosphatase, receptor type, C isofo...
PTPRC                 0.294   protein tyrosine phosphatase, receptor type, C isofo...
PTPRK                 0.285   protein tyrosine phosphatase, receptor type, K isofo...
PTPRM                 0.283   protein tyrosine phosphatase, receptor type, M isof...
PTPRM                 0.283   protein tyrosine phosphatase, receptor type, M isof...
PTPRT                 0.282   protein tyrosine phosphatase, receptor type, T isof...
PTPRT                 0.282   protein tyrosine phosphatase, receptor type, T isof...
PTPRK                 0.281   protein tyrosine phosphatase, receptor type, K isof...
PTPRZ1                0.251   protein tyrosine phosphatase, receptor-type, zeta1 p...
PTPRU                 0.250   protein tyrosine phosphatase, receptor type, U isof...
PTPRU                 0.250   protein tyrosine phosphatase, receptor type, U isof...
PTPRG                 0.249   protein tyrosine phosphatase, receptor type, G prec...
PTPRU                 0.245   protein tyrosine phosphatase, receptor type, U isof...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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