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Search of human proteins with 144953889
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|144953889 B-cell scaffold protein with ankyrin repeats 1
isoform 2 [Homo sapiens]
(755 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|144953889 B-cell scaffold protein with ankyrin repeats 1 isof... 1540 0.0
gi|144953891 B-cell scaffold protein with ankyrin repeats 1 isof... 1540 0.0
gi|189011559 B-cell scaffold protein with ankyrin repeats 1 isof... 1294 0.0
gi|45505139 phosphoinositide-3-kinase adaptor protein 1 [Homo sa... 206 8e-53
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 47 5e-05
gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens] 45 2e-04
gi|13375654 PTIP-associated 1 protein [Homo sapiens] 44 6e-04
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 42 0.002
gi|31563330 A-kinase anchor protein 13 isoform 1 [Homo sapiens] 42 0.003
gi|21493029 A-kinase anchor protein 13 isoform 2 [Homo sapiens] 42 0.003
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 41 0.004
gi|210032580 SET domain containing 1B [Homo sapiens] 40 0.008
gi|83035129 coiled-coil domain containing 108 isoform 1 [Homo sa... 40 0.010
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 39 0.014
gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1 precu... 39 0.018
gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2 pre... 39 0.018
gi|14277690 hypothetical protein LOC9750 isoform 2 [Homo sapiens] 39 0.018
gi|164414421 hypothetical protein LOC9750 isoform 1 [Homo sapiens] 39 0.018
gi|55741655 anoctamin 8 [Homo sapiens] 39 0.023
gi|117553584 adaptor-related protein complex 3, delta 1 subunit ... 39 0.023
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 39 0.023
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 39 0.023
gi|122937434 Rho-guanine nucleotide exchange factor [Homo sapiens] 38 0.030
gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens] 38 0.030
gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens] 38 0.030
gi|209862789 microtubule associated monoxygenase, calponin and L... 37 0.052
gi|50726968 microfibrillar-associated protein 1 [Homo sapiens] 37 0.052
gi|17975763 myelin transcription factor 1 [Homo sapiens] 37 0.068
gi|118600967 shroom family member 4 [Homo sapiens] 37 0.088
gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo s... 37 0.088
>gi|144953889 B-cell scaffold protein with ankyrin repeats 1 isoform
2 [Homo sapiens]
Length = 755
Score = 1540 bits (3987), Expect = 0.0
Identities = 755/755 (100%), Positives = 755/755 (100%)
Query: 1 MIYEEDAEEWALYLTEVFLHVVKREAILLYRLENFSFRHLELLNLTSYKCKLLILSNSLL 60
MIYEEDAEEWALYLTEVFLHVVKREAILLYRLENFSFRHLELLNLTSYKCKLLILSNSLL
Sbjct: 1 MIYEEDAEEWALYLTEVFLHVVKREAILLYRLENFSFRHLELLNLTSYKCKLLILSNSLL 60
Query: 61 RDLTPKKCQFLEKILHSPKSVVTLLCGVKSSDQLYELLNISQSRWEISTEQEPEDYISVI 120
RDLTPKKCQFLEKILHSPKSVVTLLCGVKSSDQLYELLNISQSRWEISTEQEPEDYISVI
Sbjct: 61 RDLTPKKCQFLEKILHSPKSVVTLLCGVKSSDQLYELLNISQSRWEISTEQEPEDYISVI 120
Query: 121 QSIIFKDSEDYFEVNIPTDLRAKHSGEISERKEIEELSEASRNTIPLAVVLPTEIPCENP 180
QSIIFKDSEDYFEVNIPTDLRAKHSGEISERKEIEELSEASRNTIPLAVVLPTEIPCENP
Sbjct: 121 QSIIFKDSEDYFEVNIPTDLRAKHSGEISERKEIEELSEASRNTIPLAVVLPTEIPCENP 180
Query: 181 GEIFIILRDEVIGDTVEVEFTSSNKRIRTRPALWNKKVWCMKALEFPAGSVHVNVYCDGI 240
GEIFIILRDEVIGDTVEVEFTSSNKRIRTRPALWNKKVWCMKALEFPAGSVHVNVYCDGI
Sbjct: 181 GEIFIILRDEVIGDTVEVEFTSSNKRIRTRPALWNKKVWCMKALEFPAGSVHVNVYCDGI 240
Query: 241 VKATTKIKYYPTAKAKECLFRMADSGESLCQNSIEELDGVLTSIFKHEIPYYEFQSLQTE 300
VKATTKIKYYPTAKAKECLFRMADSGESLCQNSIEELDGVLTSIFKHEIPYYEFQSLQTE
Sbjct: 241 VKATTKIKYYPTAKAKECLFRMADSGESLCQNSIEELDGVLTSIFKHEIPYYEFQSLQTE 300
Query: 301 ICSQNKYTHFKELPTLLHCAAKFGLKNLAIHLLQCSGATWASKMKNMEGSDPAHIAERHG 360
ICSQNKYTHFKELPTLLHCAAKFGLKNLAIHLLQCSGATWASKMKNMEGSDPAHIAERHG
Sbjct: 301 ICSQNKYTHFKELPTLLHCAAKFGLKNLAIHLLQCSGATWASKMKNMEGSDPAHIAERHG 360
Query: 361 HKELKKIFEDFSIQEIDINNEQENDYEEDIASFSTYIPSTQNPAFHHESRKTYGQSADGA 420
HKELKKIFEDFSIQEIDINNEQENDYEEDIASFSTYIPSTQNPAFHHESRKTYGQSADGA
Sbjct: 361 HKELKKIFEDFSIQEIDINNEQENDYEEDIASFSTYIPSTQNPAFHHESRKTYGQSADGA 420
Query: 421 EANEMEGEGKQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGADPENNSQEPLMSSRPP 480
EANEMEGEGKQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGADPENNSQEPLMSSRPP
Sbjct: 421 EANEMEGEGKQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGADPENNSQEPLMSSRPP 480
Query: 481 LPPPRPVANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKE 540
LPPPRPVANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKE
Sbjct: 481 LPPPRPVANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKE 540
Query: 541 QEEEEDPYTFAEIDDSEYDMILANLSIKKKTGSRSFIINRPPAPTPRPTSIPPKEETTPY 600
QEEEEDPYTFAEIDDSEYDMILANLSIKKKTGSRSFIINRPPAPTPRPTSIPPKEETTPY
Sbjct: 541 QEEEEDPYTFAEIDDSEYDMILANLSIKKKTGSRSFIINRPPAPTPRPTSIPPKEETTPY 600
Query: 601 IAQVFQQKTARRQSDDDKFCGLPKKQDRARIESPAFSTLRGCLTDGQEELILLQEKVKNG 660
IAQVFQQKTARRQSDDDKFCGLPKKQDRARIESPAFSTLRGCLTDGQEELILLQEKVKNG
Sbjct: 601 IAQVFQQKTARRQSDDDKFCGLPKKQDRARIESPAFSTLRGCLTDGQEELILLQEKVKNG 660
Query: 661 KMSMDEALEKFKHWQMGKSGLEMIQQEKLRQLRDCIIGKRPEEENVYNKLTIVHHPGGKE 720
KMSMDEALEKFKHWQMGKSGLEMIQQEKLRQLRDCIIGKRPEEENVYNKLTIVHHPGGKE
Sbjct: 661 KMSMDEALEKFKHWQMGKSGLEMIQQEKLRQLRDCIIGKRPEEENVYNKLTIVHHPGGKE 720
Query: 721 TAHNENKFYNVHFSNKLPARPQVEKEFGFCCKKDH 755
TAHNENKFYNVHFSNKLPARPQVEKEFGFCCKKDH
Sbjct: 721 TAHNENKFYNVHFSNKLPARPQVEKEFGFCCKKDH 755
>gi|144953891 B-cell scaffold protein with ankyrin repeats 1 isoform
1 [Homo sapiens]
Length = 785
Score = 1540 bits (3987), Expect = 0.0
Identities = 755/755 (100%), Positives = 755/755 (100%)
Query: 1 MIYEEDAEEWALYLTEVFLHVVKREAILLYRLENFSFRHLELLNLTSYKCKLLILSNSLL 60
MIYEEDAEEWALYLTEVFLHVVKREAILLYRLENFSFRHLELLNLTSYKCKLLILSNSLL
Sbjct: 31 MIYEEDAEEWALYLTEVFLHVVKREAILLYRLENFSFRHLELLNLTSYKCKLLILSNSLL 90
Query: 61 RDLTPKKCQFLEKILHSPKSVVTLLCGVKSSDQLYELLNISQSRWEISTEQEPEDYISVI 120
RDLTPKKCQFLEKILHSPKSVVTLLCGVKSSDQLYELLNISQSRWEISTEQEPEDYISVI
Sbjct: 91 RDLTPKKCQFLEKILHSPKSVVTLLCGVKSSDQLYELLNISQSRWEISTEQEPEDYISVI 150
Query: 121 QSIIFKDSEDYFEVNIPTDLRAKHSGEISERKEIEELSEASRNTIPLAVVLPTEIPCENP 180
QSIIFKDSEDYFEVNIPTDLRAKHSGEISERKEIEELSEASRNTIPLAVVLPTEIPCENP
Sbjct: 151 QSIIFKDSEDYFEVNIPTDLRAKHSGEISERKEIEELSEASRNTIPLAVVLPTEIPCENP 210
Query: 181 GEIFIILRDEVIGDTVEVEFTSSNKRIRTRPALWNKKVWCMKALEFPAGSVHVNVYCDGI 240
GEIFIILRDEVIGDTVEVEFTSSNKRIRTRPALWNKKVWCMKALEFPAGSVHVNVYCDGI
Sbjct: 211 GEIFIILRDEVIGDTVEVEFTSSNKRIRTRPALWNKKVWCMKALEFPAGSVHVNVYCDGI 270
Query: 241 VKATTKIKYYPTAKAKECLFRMADSGESLCQNSIEELDGVLTSIFKHEIPYYEFQSLQTE 300
VKATTKIKYYPTAKAKECLFRMADSGESLCQNSIEELDGVLTSIFKHEIPYYEFQSLQTE
Sbjct: 271 VKATTKIKYYPTAKAKECLFRMADSGESLCQNSIEELDGVLTSIFKHEIPYYEFQSLQTE 330
Query: 301 ICSQNKYTHFKELPTLLHCAAKFGLKNLAIHLLQCSGATWASKMKNMEGSDPAHIAERHG 360
ICSQNKYTHFKELPTLLHCAAKFGLKNLAIHLLQCSGATWASKMKNMEGSDPAHIAERHG
Sbjct: 331 ICSQNKYTHFKELPTLLHCAAKFGLKNLAIHLLQCSGATWASKMKNMEGSDPAHIAERHG 390
Query: 361 HKELKKIFEDFSIQEIDINNEQENDYEEDIASFSTYIPSTQNPAFHHESRKTYGQSADGA 420
HKELKKIFEDFSIQEIDINNEQENDYEEDIASFSTYIPSTQNPAFHHESRKTYGQSADGA
Sbjct: 391 HKELKKIFEDFSIQEIDINNEQENDYEEDIASFSTYIPSTQNPAFHHESRKTYGQSADGA 450
Query: 421 EANEMEGEGKQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGADPENNSQEPLMSSRPP 480
EANEMEGEGKQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGADPENNSQEPLMSSRPP
Sbjct: 451 EANEMEGEGKQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGADPENNSQEPLMSSRPP 510
Query: 481 LPPPRPVANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKE 540
LPPPRPVANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKE
Sbjct: 511 LPPPRPVANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKE 570
Query: 541 QEEEEDPYTFAEIDDSEYDMILANLSIKKKTGSRSFIINRPPAPTPRPTSIPPKEETTPY 600
QEEEEDPYTFAEIDDSEYDMILANLSIKKKTGSRSFIINRPPAPTPRPTSIPPKEETTPY
Sbjct: 571 QEEEEDPYTFAEIDDSEYDMILANLSIKKKTGSRSFIINRPPAPTPRPTSIPPKEETTPY 630
Query: 601 IAQVFQQKTARRQSDDDKFCGLPKKQDRARIESPAFSTLRGCLTDGQEELILLQEKVKNG 660
IAQVFQQKTARRQSDDDKFCGLPKKQDRARIESPAFSTLRGCLTDGQEELILLQEKVKNG
Sbjct: 631 IAQVFQQKTARRQSDDDKFCGLPKKQDRARIESPAFSTLRGCLTDGQEELILLQEKVKNG 690
Query: 661 KMSMDEALEKFKHWQMGKSGLEMIQQEKLRQLRDCIIGKRPEEENVYNKLTIVHHPGGKE 720
KMSMDEALEKFKHWQMGKSGLEMIQQEKLRQLRDCIIGKRPEEENVYNKLTIVHHPGGKE
Sbjct: 691 KMSMDEALEKFKHWQMGKSGLEMIQQEKLRQLRDCIIGKRPEEENVYNKLTIVHHPGGKE 750
Query: 721 TAHNENKFYNVHFSNKLPARPQVEKEFGFCCKKDH 755
TAHNENKFYNVHFSNKLPARPQVEKEFGFCCKKDH
Sbjct: 751 TAHNENKFYNVHFSNKLPARPQVEKEFGFCCKKDH 785
>gi|189011559 B-cell scaffold protein with ankyrin repeats 1 isoform
3 [Homo sapiens]
Length = 652
Score = 1294 bits (3348), Expect = 0.0
Identities = 629/629 (100%), Positives = 629/629 (100%)
Query: 127 DSEDYFEVNIPTDLRAKHSGEISERKEIEELSEASRNTIPLAVVLPTEIPCENPGEIFII 186
DSEDYFEVNIPTDLRAKHSGEISERKEIEELSEASRNTIPLAVVLPTEIPCENPGEIFII
Sbjct: 24 DSEDYFEVNIPTDLRAKHSGEISERKEIEELSEASRNTIPLAVVLPTEIPCENPGEIFII 83
Query: 187 LRDEVIGDTVEVEFTSSNKRIRTRPALWNKKVWCMKALEFPAGSVHVNVYCDGIVKATTK 246
LRDEVIGDTVEVEFTSSNKRIRTRPALWNKKVWCMKALEFPAGSVHVNVYCDGIVKATTK
Sbjct: 84 LRDEVIGDTVEVEFTSSNKRIRTRPALWNKKVWCMKALEFPAGSVHVNVYCDGIVKATTK 143
Query: 247 IKYYPTAKAKECLFRMADSGESLCQNSIEELDGVLTSIFKHEIPYYEFQSLQTEICSQNK 306
IKYYPTAKAKECLFRMADSGESLCQNSIEELDGVLTSIFKHEIPYYEFQSLQTEICSQNK
Sbjct: 144 IKYYPTAKAKECLFRMADSGESLCQNSIEELDGVLTSIFKHEIPYYEFQSLQTEICSQNK 203
Query: 307 YTHFKELPTLLHCAAKFGLKNLAIHLLQCSGATWASKMKNMEGSDPAHIAERHGHKELKK 366
YTHFKELPTLLHCAAKFGLKNLAIHLLQCSGATWASKMKNMEGSDPAHIAERHGHKELKK
Sbjct: 204 YTHFKELPTLLHCAAKFGLKNLAIHLLQCSGATWASKMKNMEGSDPAHIAERHGHKELKK 263
Query: 367 IFEDFSIQEIDINNEQENDYEEDIASFSTYIPSTQNPAFHHESRKTYGQSADGAEANEME 426
IFEDFSIQEIDINNEQENDYEEDIASFSTYIPSTQNPAFHHESRKTYGQSADGAEANEME
Sbjct: 264 IFEDFSIQEIDINNEQENDYEEDIASFSTYIPSTQNPAFHHESRKTYGQSADGAEANEME 323
Query: 427 GEGKQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGADPENNSQEPLMSSRPPLPPPRP 486
GEGKQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGADPENNSQEPLMSSRPPLPPPRP
Sbjct: 324 GEGKQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGADPENNSQEPLMSSRPPLPPPRP 383
Query: 487 VANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKEQEEEED 546
VANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKEQEEEED
Sbjct: 384 VANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKEQEEEED 443
Query: 547 PYTFAEIDDSEYDMILANLSIKKKTGSRSFIINRPPAPTPRPTSIPPKEETTPYIAQVFQ 606
PYTFAEIDDSEYDMILANLSIKKKTGSRSFIINRPPAPTPRPTSIPPKEETTPYIAQVFQ
Sbjct: 444 PYTFAEIDDSEYDMILANLSIKKKTGSRSFIINRPPAPTPRPTSIPPKEETTPYIAQVFQ 503
Query: 607 QKTARRQSDDDKFCGLPKKQDRARIESPAFSTLRGCLTDGQEELILLQEKVKNGKMSMDE 666
QKTARRQSDDDKFCGLPKKQDRARIESPAFSTLRGCLTDGQEELILLQEKVKNGKMSMDE
Sbjct: 504 QKTARRQSDDDKFCGLPKKQDRARIESPAFSTLRGCLTDGQEELILLQEKVKNGKMSMDE 563
Query: 667 ALEKFKHWQMGKSGLEMIQQEKLRQLRDCIIGKRPEEENVYNKLTIVHHPGGKETAHNEN 726
ALEKFKHWQMGKSGLEMIQQEKLRQLRDCIIGKRPEEENVYNKLTIVHHPGGKETAHNEN
Sbjct: 564 ALEKFKHWQMGKSGLEMIQQEKLRQLRDCIIGKRPEEENVYNKLTIVHHPGGKETAHNEN 623
Query: 727 KFYNVHFSNKLPARPQVEKEFGFCCKKDH 755
KFYNVHFSNKLPARPQVEKEFGFCCKKDH
Sbjct: 624 KFYNVHFSNKLPARPQVEKEFGFCCKKDH 652
>gi|45505139 phosphoinositide-3-kinase adaptor protein 1 [Homo
sapiens]
Length = 805
Score = 206 bits (523), Expect = 8e-53
Identities = 199/735 (27%), Positives = 319/735 (43%), Gaps = 114/735 (15%)
Query: 1 MIYEEDAEEWALYLTEVFL--HVVKREAILLYRL-ENFSFRHLELLNLTSYKCKLLILSN 57
++Y DAEEW YL +FL V+ + IL +RL SF +L S +C +++LS
Sbjct: 14 IVYSPDAEEWCQYLQTLFLSSRQVRSQKILTHRLGPEASFSAEDLSLFLSTRCVVVLLSA 73
Query: 58 SLLRDL-TPKKCQFLEKILHSPKSVVTLLCGVKSSDQLYELLNISQSRWEISTEQEPEDY 116
L++ P L++ H P VV LLCGV+ S++ + E++ + EPE Y
Sbjct: 74 ELVQHFHKPALLPLLQRAFHPPHRVVRLLCGVRDSEEFLDFFPDWAHWQELTCDDEPETY 133
Query: 117 ISVIQSIIFKDSEDYFEVNIPTDLRAKHSGEISERKEIEELSEASRNTIPLAVVLPTEIP 176
++ ++ I +DS + TD + +S K+ + S L VV P I
Sbjct: 134 VAAVKKAISEDSG----CDSVTDTEPEDEKVVSYSKQQNLPTVTSPGN--LMVVQPDRIR 187
Query: 177 CENPGEIFIILRDEVIGDTV--EVEFTSSNK-RIRTRPALWNKKVWCMKALEFPAGSVHV 233
C +++I+R + + D V E EF+ + +R + N+ +KA +G+V +
Sbjct: 188 CGAETTVYVIVRCK-LDDRVATEAEFSPEDSPSVRMEAKVENEYTISVKAPNLSSGNVSL 246
Query: 234 NVYCDGIVKATTKIKYYPTAKA-KECLFRMADSGESLCQN------SIEELDGVLTSIFK 286
+Y +V T I YY + L A+ E +CQ + E LD +LT K
Sbjct: 247 KIYSGDLVVCETVISYYTDMEEIGNLLSNAANPVEFMCQAFKIVPYNTETLDKLLTESLK 306
Query: 287 HEIP-----YYEFQSLQTEICSQNKYTHFKELPTLLHCAAKFGLKNLAIHLLQCSGATWA 341
+ IP + L+ E N+ +ELPTLLH AAK+GLKNL LL C GA A
Sbjct: 307 NNIPASGLHLFGINQLEEEDMMTNQRD--EELPTLLHFAAKYGLKNLTALLLTCPGALQA 364
Query: 342 SKMKNMEGSDPAHIAERHGHKELKKIFEDFSIQEIDINNEQENDYEEDIASFSTYIPSTQ 401
+ N G P IAE+HG ++L++ +++ ++ +D+
Sbjct: 365 YSVANKHGHYPNTIAEKHGFRDLRQFIDEY-VETVDMLKS-------------------- 403
Query: 402 NPAFHHESRKTYGQSADGAEANEMEGEGKQNGSGMETKHSPLEVGSESSEDQYDDLYVFI 461
H + +G+ AD E + S L G + ED Y+ + F+
Sbjct: 404 ----HIKEELMHGEEADAVY------ESMAHLSTDLLMKCSLNPGCD--EDLYESMAAFV 451
Query: 462 PGADPENNSQEPLMSSRPPLPPPRPVANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVR 521
P A + + S+ P+P + F S+ +R
Sbjct: 452 PAATEDLYVEMLQASTSNPIP-----GDGF--------------------SRATKDSMIR 486
Query: 522 QETGDEPKGEKEKKEEEKEQEEEEDPYTFAEIDDSEYDMILANLSIKKKTGSRSFIINRP 581
+ G + ++ +EED Y + DD + + LA+ RP
Sbjct: 487 KFLEGNSMGMTNLERDQCHLGQEEDVYHTVD-DDEAFSVDLAS---------------RP 530
Query: 582 PAPTPRPTSIPPKE----ETTPYIAQVFQQKTARRQ-----SDDDKFCGLPKKQDRARIE 632
P P PRP + P + PYI +VF +K+ R S + G P + R R +
Sbjct: 531 PVPVPRPETTAPGAHQLPDNEPYIFKVFAEKSQERPGNFYVSSESIRKGPPVRPWRDRPQ 590
Query: 633 SPAFSTLRGCLTDGQEELILLQEKVKNGKMSMDEALEKFKHWQMG---KSGLEMIQQEKL 689
S + G T GQ +LI LQE+VK G +++DEA+ FK WQ+ +S QQE L
Sbjct: 591 SSIYDPFAGMKTPGQRQLITLQEQVKLGIVNVDEAVLHFKEWQLNQKKRSESFRFQQENL 650
Query: 690 RQLRDCIIGKRPEEE 704
++LRD I ++ E++
Sbjct: 651 KRLRDSITRRQREKQ 665
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 47.4 bits (111), Expect = 5e-05
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 16/88 (18%)
Query: 479 PPLPPPRPVANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQE--------TGDEPKG 530
PP PPP PV L P GT G G P + ++ + +E +
Sbjct: 841 PPPPPPPPVPGPVTLPPPQLVPEGTPGGG--------GPPALEEDLTVININSSDEEEEE 892
Query: 531 EKEKKEEEKEQEEEEDPYTFAEIDDSEY 558
E+E++EEE+E+EEEE+ + E D+ EY
Sbjct: 893 EEEEEEEEEEEEEEEEDFEEEEEDEEEY 920
Score = 37.4 bits (85), Expect = 0.052
Identities = 24/74 (32%), Positives = 38/74 (51%), Gaps = 15/74 (20%)
Query: 522 QETGDEPKGEKEKKEEEKEQEEEEDPYTFAEIDDSEYDMILANLSIKKKTGSRSFIINRP 581
+E +E +GE E++EEE+++EEEE+ E++D E+ T P
Sbjct: 932 EEEFEEEEGELEEEEEEEDEEEEEE---LEEVEDLEFG-----------TAGGEVEEGAP 977
Query: 582 PAPTPRPTSIPPKE 595
P PT P ++PP E
Sbjct: 978 PPPT-LPPALPPPE 990
>gi|7656879 ALL1 fused gene from 5q31 [Homo sapiens]
Length = 1163
Score = 45.4 bits (106), Expect = 2e-04
Identities = 69/331 (20%), Positives = 127/331 (38%), Gaps = 94/331 (28%)
Query: 351 DPAHIAERHGHKELKKIFEDFSIQEIDINNEQENDYEEDI-ASFSTYIPSTQNPAFHHES 409
+P+ + H K + K ++ +++ +++D E+D + P + + HH S
Sbjct: 366 NPSKTSNGHQSKSMLK-------DDLKLSSSEDSDGEQDCDKTMPRSTPGSNSEPSHHNS 418
Query: 410 RKTYGQSADGAEANEMEGEGKQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGADPENN 469
+ AD + + G ++ SG +++ SESS ++
Sbjct: 419 -----EGADNSRDDSSSHSGSESSSGSDSE-------SESSSS--------------DSE 452
Query: 470 SQEPLMSSRP-PLPPPRPVANAFQLER------PHFTLPGTMVEGQMERSQNWGHPGVRQ 522
+ EP S+ P P PPP N +QL+ PH P + V+ + SQ + G Q
Sbjct: 453 ANEPSQSASPEPEPPP---TNKWQLDNWLNKVNPHKVSPASSVDSNIPSSQGYKKEGREQ 509
Query: 523 ETGD---EPKGEKE-----------------------------------------KKEEE 538
TG+ + G KE K+ ++
Sbjct: 510 GTGNSYTDTSGPKETSSATPGRDSKTIQKGSESGRGRQKSPAQSDSTTQRRTVGKKQPKK 569
Query: 539 KEQEEEEDPYTFAEID-DSEYDMILANLSIKKKT---GSRSFIINRPPAPTPRPTSIPPK 594
E+ E+P +I+ ++ D+ + S + K GSR I + +PRPT+ K
Sbjct: 570 AEKAAAEEPRGGLKIESETPVDLASSMPSSRHKAATKGSRKPNIKKESKSSPRPTAEKKK 629
Query: 595 EETTPYIAQVFQQ--KTARRQSDDDKFCGLP 623
++T +Q ++ +T SD D+ LP
Sbjct: 630 YKSTSKSSQKSREIIETDTSSSDSDESESLP 660
>gi|13375654 PTIP-associated 1 protein [Homo sapiens]
Length = 254
Score = 43.9 bits (102), Expect = 6e-04
Identities = 43/146 (29%), Positives = 61/146 (41%), Gaps = 23/146 (15%)
Query: 411 KTYGQSADGAEANEMEGEGKQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGADPENNS 470
K + G E E EG G + G P G E +E+ +D V P +D E
Sbjct: 45 KAEDEGEGGREETEREGSGGEEAQG----EVPSAGGEEPAEEDSEDWCV--PCSDEE--- 95
Query: 471 QEPLMSSRPPLPPPRPVANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKG 530
E +P +PPP + ++L H TL E Q E R+ E +
Sbjct: 96 VELPADGQPWMPPPSEIQRLYELLAAHGTL-----ELQAEILP-------RRPPTPEAQS 143
Query: 531 EKEKKEEEKE--QEEEEDPYTFAEID 554
E+E+ +EE E +EEEE P+ E D
Sbjct: 144 EEERSDEEPEAKEEEEEKPHMPTEFD 169
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 42.0 bits (97), Expect = 0.002
Identities = 66/302 (21%), Positives = 116/302 (38%), Gaps = 58/302 (19%)
Query: 374 QEIDINNEQENDYEEDIASFSTYIPSTQNPAFHHESRKTYGQSADGAEANEMEGEGKQNG 433
+E N E+ D E+ IA+ + G+ E +E+ EG
Sbjct: 401 EEFTANEEEAEDEEDTIAA----------------EEQLEGEVDHAMELSELAREG---- 440
Query: 434 SGMETKHSPLEVGSESSEDQYDDLYVFIPGA-DPENNSQEPLMSSRPPLPPPRPVANAFQ 492
E+ E QY Y PG+ E+ ++ + ++ P PV +
Sbjct: 441 ----------ELSMEELLQQYAGAYA--PGSGSSEDEDEDEVDANSSDCEPEGPV----E 484
Query: 493 LERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKEQEEEEDPYTFAE 552
E P + + +RS++ +E E G +E E E+ E+ + A+
Sbjct: 485 AEEPPQEDSSSQSDSVEDRSEDEEDEHSEEE---ETSGSSASEESESEESEDAQSQSQAD 541
Query: 553 IDDSEYDMILANLSIKKKTGSRSFIINRPPAPTPRPTSIPPKEETTPYIAQVFQQKTARR 612
++ + D + L + + S + + P PTP PT++ PK+E T A
Sbjct: 542 EEEEDDDFGVEYLLARDEEQSEADAGSGP--PTPGPTTLGPKKEITDI--------AAAA 591
Query: 613 QSDDDKFCGLPKKQDRARIESPAFSTLRGCLTD----GQEELILLQEKVKNGKMSMDEAL 668
+S K L Q +++P LRG L + G + L+ + EK NG ++ + L
Sbjct: 592 ESLQPKGYTLATTQ----VKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGL 647
Query: 669 EK 670
K
Sbjct: 648 GK 649
Score = 34.7 bits (78), Expect = 0.34
Identities = 37/171 (21%), Positives = 72/171 (42%), Gaps = 26/171 (15%)
Query: 523 ETGD-EPKGEKEKKEEEKEQEEEEDPYTFAEIDDSEYDMILANLSIKKKTGSRSF---II 578
E GD +P+ ++E+ +EE + EE+ AE E +++ + + RS ++
Sbjct: 285 EDGDFQPQEDEEEDDEETIEVEEQQEGNDAEAQRREIELLRREGELPLEELLRSLPPQLL 344
Query: 579 NRPPAPTPRPTSIPP---------KEETTPYIAQVFQQKTARRQ---------SDDDKFC 620
P +P+ P+S EE P + ++ +A Q DD++F
Sbjct: 345 EGPSSPSQTPSSHDSDTRDGPEEGAEEEPPQVLEIKPPPSAVTQRNKQPWHPDEDDEEFT 404
Query: 621 GLPKKQDRARIESPAFSTLRGCLTDGQEELILLQEKVKNGKMSMDEALEKF 671
++ + A L G + E L E + G++SM+E L+++
Sbjct: 405 ANEEEAEDEEDTIAAEEQLEGEVDHAME----LSELAREGELSMEELLQQY 451
>gi|31563330 A-kinase anchor protein 13 isoform 1 [Homo sapiens]
Length = 2817
Score = 41.6 bits (96), Expect = 0.003
Identities = 57/239 (23%), Positives = 93/239 (38%), Gaps = 23/239 (9%)
Query: 315 TLLHCAAKFGLKNLAIHLLQCSGATWASKMKNMEGSDPAHIAERHGHKELKKIFEDFSIQ 374
TL+H A + GL L LLQ G A + N EG+ P +A G+ +L ++
Sbjct: 166 TLMHFAVRLGLLRLTWFLLQKPGGRGALSIHNQEGATPVSLALERGYHKLHQLL------ 219
Query: 375 EIDINNEQENDYEEDI-ASFSTYIPSTQNPAFHHESRKTYGQSADGAEANEMEGEGKQNG 433
+EN E D +S S IP HH Y +++ +E G
Sbjct: 220 ------TEENAGEPDSWSSLSYEIPYGDCSVRHHRELDIYTLTSESDSHHEHPFPGDGCT 273
Query: 434 SGMETKHSPLEVGSESSEDQYDDLYVFI-----PGADPENNSQEPLMSSRPPLPPPRPVA 488
+ + + +++ Q D L + P + PE + Q + P P+ ++
Sbjct: 274 GPIFKLMNIQQQLMKTNLKQMDSLMPLMMTAQDPSSAPETDGQ--FLPCAPEPTDPQRLS 331
Query: 489 NAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKEQEEEEDP 547
++ + E PG+ V Q E + V +E D +K K E K +E E P
Sbjct: 332 SSEETESTQ-CCPGSPV-AQTESPCDLSSI-VEEENTDRSCRKKNKGVERKGEEVEPAP 387
>gi|21493029 A-kinase anchor protein 13 isoform 2 [Homo sapiens]
Length = 2813
Score = 41.6 bits (96), Expect = 0.003
Identities = 57/239 (23%), Positives = 93/239 (38%), Gaps = 23/239 (9%)
Query: 315 TLLHCAAKFGLKNLAIHLLQCSGATWASKMKNMEGSDPAHIAERHGHKELKKIFEDFSIQ 374
TL+H A + GL L LLQ G A + N EG+ P +A G+ +L ++
Sbjct: 166 TLMHFAVRLGLLRLTWFLLQKPGGRGALSIHNQEGATPVSLALERGYHKLHQLL------ 219
Query: 375 EIDINNEQENDYEEDI-ASFSTYIPSTQNPAFHHESRKTYGQSADGAEANEMEGEGKQNG 433
+EN E D +S S IP HH Y +++ +E G
Sbjct: 220 ------TEENAGEPDSWSSLSYEIPYGDCSVRHHRELDIYTLTSESDSHHEHPFPGDGCT 273
Query: 434 SGMETKHSPLEVGSESSEDQYDDLYVFI-----PGADPENNSQEPLMSSRPPLPPPRPVA 488
+ + + +++ Q D L + P + PE + Q + P P+ ++
Sbjct: 274 GPIFKLMNIQQQLMKTNLKQMDSLMPLMMTAQDPSSAPETDGQ--FLPCAPEPTDPQRLS 331
Query: 489 NAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKEQEEEEDP 547
++ + E PG+ V Q E + V +E D +K K E K +E E P
Sbjct: 332 SSEETESTQ-CCPGSPV-AQTESPCDLSSI-VEEENTDRSCRKKNKGVERKGEEVEPAP 387
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 41.2 bits (95), Expect = 0.004
Identities = 42/157 (26%), Positives = 61/157 (38%), Gaps = 7/157 (4%)
Query: 462 PGADPENNSQEPLMSSRPPLPPPRPVANAFQLERP-HFTLPGTMVEGQMERSQNWGHP-- 518
P P ++S P PP PP P A F + P H T E+ + P
Sbjct: 197 PSPSPSSSSPSPPPPPPPPAPPAPP-APRFDIYDPFHPTDEAYSPPPAPEQKYDPFEPTG 255
Query: 519 GVRQETGDEPKGEKEKKEEEKEQEEEEDPYTFAEIDD--SEYDMILANLSIKKKTGSRSF 576
+ P E+E++EEE+E+EEEED + S LA + + S+ F
Sbjct: 256 SNPSSSAGTPSPEEEEEEEEEEEEEEEDEEEEEGLSQSISRISETLAGI-YDDNSLSQDF 314
Query: 577 IINRPPAPTPRPTSIPPKEETTPYIAQVFQQKTARRQ 613
+ P P +PT P T P + RR+
Sbjct: 315 PGDESPRPDAQPTQPTPAPGTPPQVDSTRADGAMRRR 351
Score = 35.8 bits (81), Expect = 0.15
Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 17/199 (8%)
Query: 408 ESRKTYGQSADGAEANEMEGEGKQNGSG--METKHSPLEVGSESSEDQYDDLYVFIPGAD 465
+++ T G++ ++ G GSG + K S + S+++ + GA+
Sbjct: 910 KTKGTKGKTKPSKTRKKVRSGGGSGGSGGQVSLKKSKADSCSQAAGTK---------GAE 960
Query: 466 PENNSQEPLMSSRPPLPPPRPVANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQETG 525
+ S E + P PPP+ L T+ + ++ G
Sbjct: 961 ETSWSGEERAAKVPSTPPPKAAPPPPALTPDSQTVDSSCKTPEVSFLPEEATEEAGVRGG 1020
Query: 526 DEPKGEKEKKEEEKEQEEEEDPYTFAEIDDSEYDMILANLS------IKKKTGSRSFIIN 579
E + E+E++EEE+E+EEE+ P T + A + + G S +
Sbjct: 1021 AEEEEEEEEEEEEEEEEEEQQPATTTATSTAAAAPSTAPSAGSTAGDSGAEDGPASRVSQ 1080
Query: 580 RPPAPTPRPTSIPPKEETT 598
P P P P ++P + T
Sbjct: 1081 LPTLPPPMPWNLPAGVDCT 1099
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 40.0 bits (92), Expect = 0.008
Identities = 52/238 (21%), Positives = 86/238 (36%), Gaps = 24/238 (10%)
Query: 369 EDFSIQEIDINNEQENDYEEDI------ASFSTYIPSTQNPAFHHESRKTYGQSADGAEA 422
ED ++ E +E ++D EE + A ++ S+++ F S + S D E
Sbjct: 1079 EDTALSEASEKDEGDSDEEETVSIVTSKAEATSSSESSESSEFESSSESSPSSSEDEEEV 1138
Query: 423 NEMEGEGKQNGSGMETKHSPLEVGSESSEDQYDD--LYVFIPGADPENNSQEPLMSSRPP 480
E E ++ M + S G E E ++ L P D +E + +
Sbjct: 1139 VAREEEEEEEEEEMVAEESMASAGPEDFEQDGEEAALAPGAPAVDSLGMEEEVDIETEAV 1198
Query: 481 LPPPRPVANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKE 540
P RP L+ P + VE + + PG+ QE E KE E
Sbjct: 1199 APEERPS----MLDEPPLPVG---VEEPADSREPPEEPGLSQEGAMLLSPEPPAKEVEAR 1251
Query: 541 QEEEEDPYTFAEIDDSEYDMILANLSIKKKTGSRSFIINRPPAPTPRPTSIPPKEETT 598
+ +++ ++ L ++ PP PRP S PP+ ETT
Sbjct: 1252 PPLSPERAPEHDLEVEPEPPMMLPLPLQPPL---------PPPRPPRPPSPPPEPETT 1300
>gi|83035129 coiled-coil domain containing 108 isoform 1 [Homo
sapiens]
Length = 1925
Score = 39.7 bits (91), Expect = 0.010
Identities = 39/139 (28%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 517 HPGV-RQETGDEPKGEKEKKEEEKEQEEEEDPYTFAEIDDSEYDMILANLSIKKKTGSRS 575
+PG+ ++E G+E KGE+E++E E+E+EEEE+ E+ E + K++ S +
Sbjct: 1754 YPGLGKKEEGEEEKGEEEEEELEEEEEEEEETEE-EELGKEEIEEKEEERDEKEEKVSWA 1812
Query: 576 FIINRPPAPTPRPTSIPPKEETTPYIAQVFQQKTARRQSDDDKFCGLPKKQDRARIESPA 635
I PTP+P S +E Q Q D+K A PA
Sbjct: 1813 GI-----GPTPQPES---QESMQWQWQQQLNVMVKEEQEQDEK---------EAIRRLPA 1855
Query: 636 FSTLRGCLTDGQEELILLQ 654
F+ L+ L + + IL++
Sbjct: 1856 FANLQEALLENMIQNILVE 1874
Score = 30.0 bits (66), Expect = 8.3
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 502 GTMVEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKEQEEEEDPYTFAEI 553
G +G+ E + +ET +E G++E +E+E+E++E+E+ ++A I
Sbjct: 1763 GEEEKGEEEEEELEEEEEEEEETEEEELGKEEIEEKEEERDEKEEKVSWAGI 1814
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 39.3 bits (90), Expect = 0.014
Identities = 43/199 (21%), Positives = 86/199 (43%), Gaps = 26/199 (13%)
Query: 506 EGQMERSQNWGHPGVRQETGDEP-------------KGEKEKKEEEKEQEEEEDPYTFAE 552
+GQ + +N PG E+G+E K EK+++E +K EE+ E
Sbjct: 198 KGQKKNQKN--KPGPNIESGNEDDDASFKIKTVAQKKAEKKERERKKRDEEKAKLRKLKE 255
Query: 553 IDDSEYDMILANLSIKKKTGSRSFIINRPPAPTPRPTSIPPKEE---TTPYIAQVFQQKT 609
++ E K+K R F + T + P E TP A+ +
Sbjct: 256 KEELETG---KKDQSKQKESQRKFEEETVKSKVTVDTGVIPASEEKAETPTAAE-DDNEG 311
Query: 610 ARRQSDDDKFCGLPKKQDRARIESPAFSTLRGCLTDGQEELILLQEKVKNGKMSMDEALE 669
+++ D K G +++++ + + P+ +T++ QE L L+E+ + K +E ++
Sbjct: 312 DKKKKDKKKKKGEKEEKEKEKKKGPSKATVKAM----QEALAKLKEEEERQKREEEERIK 367
Query: 670 KFKHWQMGKSGLEMIQQEK 688
+ + + + E ++QEK
Sbjct: 368 RLEELEAKRKEEERLEQEK 386
Score = 31.2 bits (69), Expect = 3.7
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 520 VRQETGDEPKGEKEKKEEEKEQEE-EEDPYTFAEIDDSEYDMILANLSIKKKTG 572
V E + P+ E+E++EEE+E EE EE+ E + SE D +S +K +G
Sbjct: 523 VHIEVKENPEEEEEEEEEEEEDEESEEEEEEEGESEGSEGDEEDEKVSDEKDSG 576
>gi|4758172 dentin matrix acidic phosphoprotein 1 isoform 1
precursor [Homo sapiens]
Length = 513
Score = 38.9 bits (89), Expect = 0.018
Identities = 54/257 (21%), Positives = 97/257 (37%), Gaps = 23/257 (8%)
Query: 348 EGSDPAHIAERHGHKEL----KKIFEDFSIQEIDINNE-QENDYEEDIASFSTYIPSTQN 402
E S+ A+ + G + L +KIF I E D +E +N+ E++ S ST ++++
Sbjct: 244 ENSEQANTQDSGGSQLLEHPSRKIFRKSRISEEDDRSELDDNNTMEEVKSDSTENSNSRD 303
Query: 403 PAFHHESRKTYGQSADGAEANEMEGE-----GKQNGSGMETKHSPLEVGSESSE------ 451
R + G S + ++ N + E G + S E S E SES E
Sbjct: 304 TGLSQPRRDSKGDSQEDSKENLSQEESQNVDGPSSESSQEANLSSQENSSESQEEVVSES 363
Query: 452 --DQYDDLYVFIPGADPENNSQEPLMS--SRPPLPPPRPVANAFQLERPHFTLPGTMVEG 507
D D ++ + ++S+E S A++ E +F+
Sbjct: 364 RGDNPDPTTSYVEDQEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPE 423
Query: 508 QMERSQNWG---HPGVRQETGDEPKGEKEKKEEEKEQEEEEDPYTFAEIDDSEYDMILAN 564
S G H + +E E++ + + +ED + SE D L N
Sbjct: 424 DENSSSQEGLQSHSSSAESQSEESHSEEDDSDSQDSSRSKEDSNSTESKSSSEEDGQLKN 483
Query: 565 LSIKKKTGSRSFIINRP 581
+ I+ + + N+P
Sbjct: 484 IEIESRKLTVDAYHNKP 500
>gi|121256621 dentin matrix acidic phosphoprotein 1 isoform 2
precursor [Homo sapiens]
Length = 497
Score = 38.9 bits (89), Expect = 0.018
Identities = 54/257 (21%), Positives = 97/257 (37%), Gaps = 23/257 (8%)
Query: 348 EGSDPAHIAERHGHKEL----KKIFEDFSIQEIDINNE-QENDYEEDIASFSTYIPSTQN 402
E S+ A+ + G + L +KIF I E D +E +N+ E++ S ST ++++
Sbjct: 228 ENSEQANTQDSGGSQLLEHPSRKIFRKSRISEEDDRSELDDNNTMEEVKSDSTENSNSRD 287
Query: 403 PAFHHESRKTYGQSADGAEANEMEGE-----GKQNGSGMETKHSPLEVGSESSE------ 451
R + G S + ++ N + E G + S E S E SES E
Sbjct: 288 TGLSQPRRDSKGDSQEDSKENLSQEESQNVDGPSSESSQEANLSSQENSSESQEEVVSES 347
Query: 452 --DQYDDLYVFIPGADPENNSQEPLMS--SRPPLPPPRPVANAFQLERPHFTLPGTMVEG 507
D D ++ + ++S+E S A++ E +F+
Sbjct: 348 RGDNPDPTTSYVEDQEDSDSSEEDSSHTLSHSKSESREEQADSESSESLNFSEESPESPE 407
Query: 508 QMERSQNWG---HPGVRQETGDEPKGEKEKKEEEKEQEEEEDPYTFAEIDDSEYDMILAN 564
S G H + +E E++ + + +ED + SE D L N
Sbjct: 408 DENSSSQEGLQSHSSSAESQSEESHSEEDDSDSQDSSRSKEDSNSTESKSSSEEDGQLKN 467
Query: 565 LSIKKKTGSRSFIINRP 581
+ I+ + + N+P
Sbjct: 468 IEIESRKLTVDAYHNKP 484
>gi|14277690 hypothetical protein LOC9750 isoform 2 [Homo sapiens]
Length = 591
Score = 38.9 bits (89), Expect = 0.018
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 12/112 (10%)
Query: 341 ASKMKNMEGSDPAHIAERHGHKELKKIFEDFSIQEIDINNEQENDYEE------DIASFS 394
ASKMK + PA A R E+ + F++++ I E EN E +A F+
Sbjct: 156 ASKMKQAFATSPASKAARESLTEINRSFKEYTENMCTIEVELENLLGEFSIKMKGLAGFA 215
Query: 395 TYIPSTQNPAFHHESRKTYGQSADGAEANEMEGEGKQNGSGMETKHSPLEVG 446
P Q F R+ + ++E GKQ+ G ET PL VG
Sbjct: 216 RLCPGDQYEIFMKYGRQRWKLK------GKIEVNGKQSWDGEETVFLPLIVG 261
>gi|164414421 hypothetical protein LOC9750 isoform 1 [Homo sapiens]
Length = 1068
Score = 38.9 bits (89), Expect = 0.018
Identities = 33/112 (29%), Positives = 47/112 (41%), Gaps = 12/112 (10%)
Query: 341 ASKMKNMEGSDPAHIAERHGHKELKKIFEDFSIQEIDINNEQENDYEE------DIASFS 394
ASKMK + PA A R E+ + F++++ I E EN E +A F+
Sbjct: 156 ASKMKQAFATSPASKAARESLTEINRSFKEYTENMCTIEVELENLLGEFSIKMKGLAGFA 215
Query: 395 TYIPSTQNPAFHHESRKTYGQSADGAEANEMEGEGKQNGSGMETKHSPLEVG 446
P Q F R+ + ++E GKQ+ G ET PL VG
Sbjct: 216 RLCPGDQYEIFMKYGRQRWKLK------GKIEVNGKQSWDGEETVFLPLIVG 261
>gi|55741655 anoctamin 8 [Homo sapiens]
Length = 1232
Score = 38.5 bits (88), Expect = 0.023
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 8/113 (7%)
Query: 523 ETGDEPKGEKEKKEEEKEQEEEEDPYTFAEIDDSEYDMILANLSIKKKTGSRSFIINRPP 582
E GD P G KE+ E+++E+E+EE+ E + E ++ L +KK + + R P
Sbjct: 572 EEGDGPPGGKEEDEDDEEEEDEEEEED--EEEGEEGGLLDCGLRLKKVSFAERGAGRRRP 629
Query: 583 APTPRPTSIPPKEETTPYIAQVFQQKTARRQSDDDKFCGLPKKQDRARIESPA 635
P+P +E + + + + +DD+ G P +R E PA
Sbjct: 630 GPSPEALL---EEGSPTMVEKGLEPGVFTLAEEDDEAEGAPGSPER---EPPA 676
>gi|117553584 adaptor-related protein complex 3, delta 1 subunit
isoform 1 [Homo sapiens]
Length = 1112
Score = 38.5 bits (88), Expect = 0.023
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 16/102 (15%)
Query: 527 EPKGEKEKKEEEKEQEEEEDPYTFAEIDDSEYDMILANLSIKKKTGSRSFIINR--PPAP 584
E K +K KK+E+K +E+E D E + KK F ++ PPAP
Sbjct: 747 EKKSKKPKKKEKKHKEKERDKEKKKEKE--------------KKAEDLDFWLSTTPPPAP 792
Query: 585 TPRPTSIPPKEETTPYIAQVFQQKTARRQSDDDKFCGLPKKQ 626
P P +P +E + ++ D DK PKK+
Sbjct: 793 APAPAPVPSTDECEDAKTEAQGEEDDAEGQDQDKKSPKPKKK 834
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 38.5 bits (88), Expect = 0.023
Identities = 44/202 (21%), Positives = 77/202 (38%), Gaps = 14/202 (6%)
Query: 349 GSDPAHIAERHGHKELKKIFEDFSIQEIDINNEQENDYEEDIASFSTYIPSTQNPAFHHE 408
G +AE+ K K+ E+ +E + +++E + E + + + E
Sbjct: 690 GEGEKELAEKEEWK--KRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREE 747
Query: 409 SRKTYGQSADGAEANEMEGEG-KQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGADPE 467
+ G+ + E E+EGE K+ G + + + E E DQ + G + E
Sbjct: 748 EEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGE-------GEEEE 800
Query: 468 NNSQEPLMSSRPPLPPPRPVANAFQLERPHFTLPGTMVEGQMERSQNWGHP----GVRQE 523
+ + + E G EG+ E + G G +E
Sbjct: 801 TEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEE 860
Query: 524 TGDEPKGEKEKKEEEKEQEEEE 545
G+E +GE+E +E E E EEEE
Sbjct: 861 EGEEGEGEEEGEEGEGEGEEEE 882
Score = 34.7 bits (78), Expect = 0.34
Identities = 34/136 (25%), Positives = 50/136 (36%), Gaps = 42/136 (30%)
Query: 415 QSADGAEANEMEGEGKQNGSGMETK-HSPLEVGSESSEDQYDDLYVFIPGADPENNSQEP 473
+ D E E EGEGK+ G G E + E G E++ A E +E
Sbjct: 741 EEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEER----------AGKEEKGEEE 790
Query: 474 LMSSRPPLPPPRPVANAFQLERPHFTLPGTMVEGQMERSQNWGHP---GVRQETGDEPKG 530
G EG+ E ++ G G E G+ +G
Sbjct: 791 ----------------------------GDQGEGEEEETEGRGEEKEEGGEVEGGEVEEG 822
Query: 531 EKEKKEEEKEQEEEED 546
+ E++EEE+E E EE+
Sbjct: 823 KGEREEEEEEGEGEEE 838
Score = 32.3 bits (72), Expect = 1.7
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 4/45 (8%)
Query: 506 EGQMERSQNWGHPGVR----QETGDEPKGEKEKKEEEKEQEEEED 546
E Q ++ + GH R +E G+E GE E++E ++E+EEE++
Sbjct: 708 EEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKE 752
Score = 32.3 bits (72), Expect = 1.7
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Query: 505 VEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKEQEEEEDPYTFAEIDDSE 557
VEG++E + G G+E +GE+E +E EKE E EE+ E ++ E
Sbjct: 1021 VEGEVEGEEGEGE-------GEEEEGEEEGEEREKEGEGEENRRNREEEEEEE 1066
Score = 32.0 bits (71), Expect = 2.2
Identities = 14/52 (26%), Positives = 29/52 (55%)
Query: 506 EGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKEQEEEEDPYTFAEIDDSE 557
EG+ ++ + G +E GD+ +GE+E+ E E++EE E+++ +
Sbjct: 772 EGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGK 823
Score = 32.0 bits (71), Expect = 2.2
Identities = 32/134 (23%), Positives = 49/134 (36%), Gaps = 36/134 (26%)
Query: 414 GQSADG-AEANEMEGEGKQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGADPENNSQE 472
G+ +G E E EGEG++ G G + G E E + ++ + E +E
Sbjct: 871 GEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEE-------EEGEGKGEE 923
Query: 473 PLMSSRPPLPPPRPVANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEK 532
G EG+ E + G + G+E +GE
Sbjct: 924 E----------------------------GEEGEGEGEEEEGEGEGEDGEGEGEEEEGEW 955
Query: 533 EKKEEEKEQEEEED 546
E +EEE E E EE+
Sbjct: 956 EGEEEEGEGEGEEE 969
Score = 30.8 bits (68), Expect = 4.9
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 7/59 (11%)
Query: 506 EGQMERSQNWGHPGVRQETGDEPKGEKEKKEE-------EKEQEEEEDPYTFAEIDDSE 557
EG+ E + G + G+E +GE+E +EE E E EEEE+ E++ E
Sbjct: 971 EGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEE 1029
Score = 30.8 bits (68), Expect = 4.9
Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 29/127 (22%)
Query: 414 GQSADGAEANEMEGEGKQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGADPENNSQEP 473
G+ +G E E EGEG++ G G E E++ ++ + G + E +E
Sbjct: 990 GEEEEGEEEGEEEGEGEEEGEG------------EGEEEEEGEVEGEVEGEEGEGEGEE- 1036
Query: 474 LMSSRPPLPPPRPVANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEKE 533
+ E G E + R + G QETG+E + E++
Sbjct: 1037 ---------------EEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEE-ENERQ 1080
Query: 534 KKEEEKE 540
EE K+
Sbjct: 1081 DGEEYKK 1087
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 38.5 bits (88), Expect = 0.023
Identities = 54/192 (28%), Positives = 74/192 (38%), Gaps = 19/192 (9%)
Query: 415 QSADGAEANEMEGEGKQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGADPEN---NSQ 471
Q A+G EA E EGE + G+E + E ES + D A PE+ +Q
Sbjct: 2111 QKAEGIEAPETEGEAQPESEGIEAPEAEGEAQPESEGVEAQDAE---GEAQPESEGIEAQ 2167
Query: 472 EPLMSSRPPL---PPPRPVANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEP 528
E ++P L P A Q E P E Q E + P +E EP
Sbjct: 2168 EAEEEAQPELEGVEAPEAEGEA-QPESEGIEAPEAEGEAQPE-LEGVEAPEAEEEAQPEP 2225
Query: 529 KGEKEKKEEEKEQEEEEDPYTFAEIDDSEYDMILANLSIKKKTGSRSFIINRPPAPTPRP 588
+G E E E E + E + T E S + L + ++ + S S P P RP
Sbjct: 2226 EG-VETPEAEGEAQPESEGETQGEKKGSP-QVSLGDGQSEEASESSS------PVPEDRP 2277
Query: 589 TSIPPKEETTPY 600
T P TP+
Sbjct: 2278 TPPPSPGGDTPH 2289
Score = 33.1 bits (74), Expect = 0.98
Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 11/143 (7%)
Query: 414 GQS--ADGAEANEMEGEGKQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGAD----PE 467
GQS A+G EA E EGE + G+E + + E Q + V P A+ PE
Sbjct: 1827 GQSDGAEGIEAPEAEGEAQPESEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPE 1886
Query: 468 NNSQEPLMSSRPPLPPPRPVANAFQLER----PHFTLPGTMVEGQMERSQNWGHPGVRQE 523
+ E + + P A A + E+ ++ EG+ E +E
Sbjct: 1887 SEDVE-TPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEPESEGAEAQEAEE 1945
Query: 524 TGDEPKGEKEKKEEEKEQEEEED 546
E +G+ + + E E +E E+
Sbjct: 1946 AAQEAEGQTQPESEVIESQEAEE 1968
Score = 31.2 bits (69), Expect = 3.7
Identities = 28/132 (21%), Positives = 48/132 (36%), Gaps = 2/132 (1%)
Query: 421 EANEMEGEGKQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGADPENNSQEPLMSSRPP 480
E E EGE + +E + E+ E Q + V +QE ++
Sbjct: 1985 ETQEAEGEAQPESEDVEAPEAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKT 2044
Query: 481 LPPPRPVANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKE 540
+P ++ +E P EG+++ ++ HP E +GE + + E E
Sbjct: 2045 EGDAQPESDG--VEAPEAEEEAQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVE 2102
Query: 541 QEEEEDPYTFAE 552
E E AE
Sbjct: 2103 APEAEGEAQKAE 2114
>gi|122937434 Rho-guanine nucleotide exchange factor [Homo sapiens]
Length = 1651
Score = 38.1 bits (87), Expect = 0.030
Identities = 37/156 (23%), Positives = 62/156 (39%), Gaps = 13/156 (8%)
Query: 315 TLLHCAAKFGLKNLAIHLLQCSGATWASKMKNMEGSDPAHIAERHGHKELKKIFEDF--- 371
+LLH A ++GL L+ L G A + N EG+ P +A R GH +L + +F
Sbjct: 165 SLLHLAMRWGLAKLSQFFLCLPGGVQALALPNEEGATPLDLALREGHSKLVEDVTNFQGR 224
Query: 372 ---SIQEIDINNEQENDYEEDIASFSTYIPSTQNPAFHHE---SRKTYGQSADGAEANEM 425
S + ++ E Y + + + T + RK + A +A E
Sbjct: 225 WSPSFSRVQLSEEASLHYIHSSETLTLTLNHTAEHLLEADIKLFRKYFWDRAFLVKAFEP 284
Query: 426 EGEGKQN----GSGMETKHSPLEVGSESSEDQYDDL 457
E ++ SG ET+ S S + +D+
Sbjct: 285 EARPEERTAMPSSGAETEEEIKNSVSSRSAAEKEDI 320
>gi|20336205 transcriptional regulator ATRX isoform 2 [Homo sapiens]
Length = 2454
Score = 38.1 bits (87), Expect = 0.030
Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 34/183 (18%)
Query: 378 INNEQENDYEEDIASFSTYIPSTQNPAFHHESRKTYGQSADGAEANEMEGEGKQNGSGME 437
+N+E ++D EE ++ P + H + +DG E + + K++ E
Sbjct: 1282 VNSESDSDSEE-----------SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEH---KE 1327
Query: 438 TK-HSPLEVGSESSEDQYDDLYVFIPGADPENNSQEPLMSSRPPLPPPRPVANAFQLERP 496
K + +V SE SED E+ E + S P A +LE
Sbjct: 1328 VKGRNRRKVSSEDSEDSDFQ----------ESGVSEEVSESEDEQRPRTRSAKKAELEEN 1377
Query: 497 HFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKEQEEEEDPYTFAEIDDS 556
+ ++ + V++++ E K E++EEEKE+EEEE+ E +D
Sbjct: 1378 ---------QRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDE 1428
Query: 557 EYD 559
D
Sbjct: 1429 NDD 1431
>gi|20336209 transcriptional regulator ATRX isoform 1 [Homo sapiens]
Length = 2492
Score = 38.1 bits (87), Expect = 0.030
Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 34/183 (18%)
Query: 378 INNEQENDYEEDIASFSTYIPSTQNPAFHHESRKTYGQSADGAEANEMEGEGKQNGSGME 437
+N+E ++D EE ++ P + H + +DG E + + K++ E
Sbjct: 1320 VNSESDSDSEE-----------SKKPRYRHRLLRHKLTVSDGESGEEKKTKPKEH---KE 1365
Query: 438 TK-HSPLEVGSESSEDQYDDLYVFIPGADPENNSQEPLMSSRPPLPPPRPVANAFQLERP 496
K + +V SE SED E+ E + S P A +LE
Sbjct: 1366 VKGRNRRKVSSEDSEDSDFQ----------ESGVSEEVSESEDEQRPRTRSAKKAELEEN 1415
Query: 497 HFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKEQEEEEDPYTFAEIDDS 556
+ ++ + V++++ E K E++EEEKE+EEEE+ E +D
Sbjct: 1416 ---------QRSYKQKKKRRRIKVQEDSSSENKSNSEEEEEEKEEEEEEEEEEEEEEEDE 1466
Query: 557 EYD 559
D
Sbjct: 1467 NDD 1469
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 37.4 bits (85), Expect = 0.052
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 29/145 (20%)
Query: 415 QSADGAEANEMEGEGKQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGADPENNSQEPL 474
+ A+ + E + + N S + + +V S SSE + ++ + E +EP
Sbjct: 901 RQAEALQEVPEETQAEHNLSSVLDTGAEEDVASSSSESEMEE--------EGEEEEEEPR 952
Query: 475 MSSRPPLPPPRPVANAFQLE--RPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEK 532
+ PP + E R H L G E ++E S+++G P E+
Sbjct: 953 L-------PPSDLGGVPWKEAVRIHALLKGKSEE-ELEASKSFG-----------PGNEE 993
Query: 533 EKKEEEKEQEEEEDPYTFAEIDDSE 557
E++EEE+ +EEEE+ Y E + SE
Sbjct: 994 EEEEEEEYEEEEEEDYDEEEEESSE 1018
>gi|50726968 microfibrillar-associated protein 1 [Homo sapiens]
Length = 439
Score = 37.4 bits (85), Expect = 0.052
Identities = 39/133 (29%), Positives = 58/133 (43%), Gaps = 26/133 (19%)
Query: 430 KQNGSGMETKHSPLEVGSESSEDQYDDLYVFIPGA---DPENNSQEPLMSSRPPLPPPRP 486
K+ SG ++P+E S D+ D+ + FI A + E QE SS P L R
Sbjct: 37 KRYVSGKRPDYAPME-----SSDEEDEEFQFIKKAKEQEAEPEEQEEDSSSDPRL---RR 88
Query: 487 VANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKEQEEEED 546
+ N + VE ++ R + P V E+ E +G+ + E E EEEE+
Sbjct: 89 LQNRISED----------VEERLARHRKIVEPEVVGESDSEVEGDAWRMEREDSSEEEEE 138
Query: 547 PYTFAEIDDSEYD 559
EIDD E +
Sbjct: 139 -----EIDDEEIE 146
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 37.0 bits (84), Expect = 0.068
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 522 QETGDEPKGEKEKKEEEKEQEEEEDPYTFAEIDDSEYDMILANLSIKKKTGSRSF----I 577
+E +E + E+E++EEE+E+EEEE+ E ++ E + ++ ++ T S
Sbjct: 268 EEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTSAQKAPE 327
Query: 578 INRPPAPTPRP 588
+ P +P+P+P
Sbjct: 328 LRGPESPSPKP 338
Score = 31.6 bits (70), Expect = 2.8
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 510 ERSQNWGHPGVRQETGDEPKGEKEKKEEEKEQEEEEDPYTFAEIDDSE 557
E S+ G +E +E + E+E++E+E+E+EEEE+ E ++ E
Sbjct: 247 ESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEE 294
>gi|118600967 shroom family member 4 [Homo sapiens]
Length = 1493
Score = 36.6 bits (83), Expect = 0.088
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 12/84 (14%)
Query: 468 NNSQEPLMSSR----PPLPPPRPVANAFQLERPHFTLPGTMVEGQMERSQNWGHPGVRQE 523
+ +Q L+ +R PP PP P ++L R + Q ++ Q +E
Sbjct: 1085 DETQSDLLGARKKAFPPPRPPPPNWEKYRLFRA--------AQQQKQQQQQQKQQEEEEE 1136
Query: 524 TGDEPKGEKEKKEEEKEQEEEEDP 547
+E + E+E++EEE E+EEEE P
Sbjct: 1137 EEEEEEEEEEEEEEEAEEEEEELP 1160
Score = 32.3 bits (72), Expect = 1.7
Identities = 14/37 (37%), Positives = 26/37 (70%)
Query: 521 RQETGDEPKGEKEKKEEEKEQEEEEDPYTFAEIDDSE 557
+Q+ + + E+E++EEE+E+EEEE+ AE ++ E
Sbjct: 1122 KQQQQQQKQQEEEEEEEEEEEEEEEEEEEEAEEEEEE 1158
Score = 30.0 bits (66), Expect = 8.3
Identities = 12/40 (30%), Positives = 27/40 (67%)
Query: 521 RQETGDEPKGEKEKKEEEKEQEEEEDPYTFAEIDDSEYDM 560
+Q+ + + ++E++EEE+E+EEEE+ E ++ E ++
Sbjct: 1120 QQKQQQQQQKQQEEEEEEEEEEEEEEEEEEEEAEEEEEEL 1159
>gi|20986497 mitogen-activated protein kinase 7 isoform 1 [Homo
sapiens]
Length = 816
Score = 36.6 bits (83), Expect = 0.088
Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 17/121 (14%)
Query: 493 LERPHFTLPGTMVEGQMERSQNWGHPGVRQETGDEPKGEKEKKEEEKEQEEE-------- 544
LE P P T E Q ER + ++ E E+EK+ +E+E++E
Sbjct: 499 LEAPEPRKPVTAQERQREREE-------KRRRRQERAKEREKRRQERERKERGAGASGGP 551
Query: 545 -EDPYTFAEIDDSEYDMILANLSIKKKTGSRSFIINRP-PAPTPRPTSIPPKEETTPYIA 602
DP + D++ ++ + + + P PAPTP PT + P +A
Sbjct: 552 STDPLAGLVLSDNDRSLLERWTRMARPAAPALTSVPAPAPAPTPTPTPVQPTSPPPGPVA 611
Query: 603 Q 603
Q
Sbjct: 612 Q 612
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.132 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,608,175
Number of Sequences: 37866
Number of extensions: 1702363
Number of successful extensions: 16391
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 259
Number of HSP's that attempted gapping in prelim test: 12308
Number of HSP's gapped (non-prelim): 2536
length of query: 755
length of database: 18,247,518
effective HSP length: 110
effective length of query: 645
effective length of database: 14,082,258
effective search space: 9083056410
effective search space used: 9083056410
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.