Guide to the Human Genome
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Name: BANK1 Sequence: fasta or formatted (785aa) NCBI GI: 144953891
Description:

B-cell scaffold protein with ankyrin repeats 1 isoform 1

Referenced in:

Ankyrin Family
B cells
Inositol Pathways

Other entries for this name:
alt prot [755aa] B-cell scaffold protein with ankyrin repeats 1 isoform 2
alt prot [652aa] B-cell scaffold protein with ankyrin repeats 1 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         42           2
 C cysteine            2.2         17           2
 D aspartate           4.7         37           3
 E glutamate          11.6         91           4
 F phenylalanine       3.9         31           1
 G glycine             5.4         42           2
 H histidine           2.9         23           2
 I isoleucine          6.4         50           2
 K lysine              8.0         63           3
 L leucine             8.3         65           2
 M methionine          2.0         16           1
 N asparagine          4.3         34           2
 P proline             6.8         53           3
 Q glutamine           4.3         34           2
 R arginine            4.1         32           2
 S serine              7.3         57           2
 T threonine           4.8         38           2
 V valine              3.8         30           2
 W tryptophan          0.9          7           1
 Y tyrosine            2.9         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   B-cell scaffold protein with ankyrin repeats 1 isof... 
BANK1                 0.959   B-cell scaffold protein with ankyrin repeats 1 isof...
BANK1                 0.803   B-cell scaffold protein with ankyrin repeats 1 isof...
PIK3AP1               0.117   phosphoinositide-3-kinase adaptor protein 1 
PELP1                 0.014   proline, glutamic acid and leucine rich protein 1 [...
AFF4                  0.013   ALL1 fused gene from 5q31 
C16orf53              0.012   PTIP-associated 1 protein 
SRCAP                 0.011   Snf2-related CBP activator protein 
AKAP13                0.011   A-kinase anchor protein 13 isoform 1 
AKAP13                0.011   A-kinase anchor protein 13 isoform 2 
SCAF1                 0.010   SR-related CTD-associated factor 1 
SETD1B                0.009   SET domain containing 1B 
CCDC108               0.009   coiled-coil domain containing 108 isoform 1 
EIF5B                 0.009   eukaryotic translation initiation factor 5B 
DMP1                  0.009   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.009   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
FAM65B                0.009   hypothetical protein LOC9750 isoform 2 
FAM65B                0.009   hypothetical protein LOC9750 isoform 1 
ANO8                  0.009   anoctamin 8 
AP3D1                 0.009   adaptor-related protein complex 3, delta 1 subunit ...
RPGR                  0.009   retinitis pigmentosa GTPase regulator isoform C [Hom...
RP1L1                 0.009   retinitis pigmentosa 1-like 1 
RGNEF                 0.008   Rho-guanine nucleotide exchange factor 
ATRX                  0.008   transcriptional regulator ATRX isoform 2 
ATRX                  0.008   transcriptional regulator ATRX isoform 1 
MICAL3                0.008   microtubule associated monoxygenase, calponin and L...
MFAP1                 0.008   microfibrillar-associated protein 1 
MYT1                  0.008   myelin transcription factor 1 
SHROOM4               0.008   shroom family member 4 
MAPK7                 0.008   mitogen-activated protein kinase 7 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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