Guide to the Human Genome
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Name: BANK1 Sequence: fasta or formatted (652aa) NCBI GI: 189011559
Description:

B-cell scaffold protein with ankyrin repeats 1 isoform 3

Referenced in:

Ankyrin Family
B cells
Inositol Pathways

Other entries for this name:
alt prot [755aa] B-cell scaffold protein with ankyrin repeats 1 isoform 2
alt prot [785aa] B-cell scaffold protein with ankyrin repeats 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         39           2
 C cysteine            2.1         14           2
 D aspartate           4.9         32           3
 E glutamate          11.8         77           4
 F phenylalanine       4.0         26           1
 G glycine             6.1         40           2
 H histidine           3.1         20           2
 I isoleucine          5.8         38           2
 K lysine              8.1         53           3
 L leucine             6.4         42           2
 M methionine          2.3         15           1
 N asparagine          4.4         29           2
 P proline             7.7         50           3
 Q glutamine           4.4         29           2
 R arginine            4.1         27           2
 S serine              6.7         44           2
 T threonine           4.9         32           2
 V valine              3.5         23           2
 W tryptophan          0.8          5           1
 Y tyrosine            2.6         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   B-cell scaffold protein with ankyrin repeats 1 isof... 
BANK1                 0.961   B-cell scaffold protein with ankyrin repeats 1 isof...
BANK1                 0.961   B-cell scaffold protein with ankyrin repeats 1 isof...
PIK3AP1               0.094   phosphoinositide-3-kinase adaptor protein 1 
PELP1                 0.017   proline, glutamic acid and leucine rich protein 1 [...
AFF4                  0.015   ALL1 fused gene from 5q31 
C16orf53              0.014   PTIP-associated 1 protein 
SRCAP                 0.013   Snf2-related CBP activator protein 
AKAP13                0.013   A-kinase anchor protein 13 isoform 1 
AKAP13                0.013   A-kinase anchor protein 13 isoform 2 
SCAF1                 0.012   SR-related CTD-associated factor 1 
SETD1B                0.011   SET domain containing 1B 
CCDC108               0.011   coiled-coil domain containing 108 isoform 1 
EIF5B                 0.011   eukaryotic translation initiation factor 5B 
DMP1                  0.011   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.011   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
FAM65B                0.011   hypothetical protein LOC9750 isoform 2 
FAM65B                0.011   hypothetical protein LOC9750 isoform 1 
ANO8                  0.011   anoctamin 8 
AP3D1                 0.011   adaptor-related protein complex 3, delta 1 subunit ...
RPGR                  0.011   retinitis pigmentosa GTPase regulator isoform C [Hom...
RP1L1                 0.011   retinitis pigmentosa 1-like 1 
RGNEF                 0.010   Rho-guanine nucleotide exchange factor 
ATRX                  0.010   transcriptional regulator ATRX isoform 2 
ATRX                  0.010   transcriptional regulator ATRX isoform 1 
MICAL3                0.009   microtubule associated monoxygenase, calponin and L...
MFAP1                 0.009   microfibrillar-associated protein 1 
MYT1                  0.009   myelin transcription factor 1 
SHROOM4               0.009   shroom family member 4 
MAPK7                 0.009   mitogen-activated protein kinase 7 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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