Guide to the Human Genome
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Name: ZNF544 Sequence: fasta or formatted (715aa) NCBI GI: 155722996
Description:

zinc finger protein 544

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1         22           2
 C cysteine            6.0         43           2
 D aspartate           2.7         19           2
 E glutamate           9.2         66           2
 F phenylalanine       4.3         31           1
 G glycine             6.0         43           3
 H histidine           5.6         40           2
 I isoleucine          3.1         22           2
 K lysine              7.3         52           2
 L leucine             7.3         52           2
 M methionine          0.8          6           1
 N asparagine          3.5         25           1
 P proline             4.2         30           2
 Q glutamine           6.6         47           2
 R arginine            5.6         40           2
 S serine             10.3         74           2
 T threonine           6.4         46           2
 V valine              4.1         29           2
 W tryptophan          0.7          5           1
 Y tyrosine            3.2         23           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 544 
ZNF184                0.402   zinc finger protein 184 
ZNF606                0.399   zinc finger protein 606 
ZNF569                0.393   zinc finger protein 569 
ZNF585B               0.389   zinc finger protein 585B 
ZNF470                0.384   zinc finger protein 470 
LOC100287429          0.384   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.384   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.384   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.384   zinc finger protein 84 
ZNF84                 0.384   zinc finger protein 84 
ZNF180                0.383   zinc finger protein 180 
ZNF624                0.381   zinc finger protein 624 
ZNF227                0.379   zinc finger protein 227 
ZNF420                0.375   zinc finger protein 420 
ZNF160                0.374   zinc finger protein 160 
ZNF160                0.374   zinc finger protein 160 
ZNF160                0.374   zinc finger protein 160 
ZNF268                0.374   zinc finger protein 268 
ZNF33B                0.370   zinc finger protein 33B 
ZNF484                0.370   zinc finger protein 484 isoform a 
ZNF347                0.370   zinc finger protein 347 
ZNF546                0.368   zinc finger protein 546 
ZNF33A                0.367   zinc finger protein 33A isoform b 
ZNF33A                0.367   zinc finger protein 33A isoform a 
ZNF615                0.365   zinc finger protein 615 
ZNF41                 0.364   zinc finger protein 41 
ZNF41                 0.364   zinc finger protein 41 
ZNF585A               0.364   zinc finger protein 585A 
ZNF585A               0.364   zinc finger protein 585A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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