Guide to the Human Genome
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Name: ZNF485 Sequence: fasta or formatted (441aa) NCBI GI: 197382841
Description:

zinc finger protein 485

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         26           2
 C cysteine            5.2         23           1
 D aspartate           1.8          8           1
 E glutamate           6.8         30           1
 F phenylalanine       4.1         18           1
 G glycine             7.0         31           1
 H histidine           7.0         31           2
 I isoleucine          3.6         16           1
 K lysine             11.8         52           2
 L leucine             5.4         24           2
 M methionine          1.8          8           2
 N asparagine          3.9         17           1
 P proline             3.6         16           1
 Q glutamine           4.5         20           1
 R arginine            6.1         27           1
 S serine              9.1         40           3
 T threonine           5.4         24           1
 V valine              2.9         13           1
 W tryptophan          0.9          4           1
 Y tyrosine            2.9         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 485 
ZNF383                0.480   zinc finger protein 383 
ZNF85                 0.478   zinc finger protein 85 
ZNF93                 0.477   zinc finger protein 93 
LOC646864             0.475   PREDICTED: similar to hCG36734 
LOC646864             0.475   PREDICTED: similar to hCG36734 
LOC646864             0.475   PREDICTED: similar to hCG36734 
ZNF66                 0.473   PREDICTED: zinc finger protein 66 
ZNF66                 0.473   PREDICTED: zinc finger protein 66 
ZNF66                 0.473   PREDICTED: zinc finger protein 66 
ZNF737                0.470   zinc finger protein 737 
ZNF737                0.470   PREDICTED: zinc finger protein 737 
ZNF737                0.470   PREDICTED: zinc finger protein 737 
ZNF737                0.470   PREDICTED: zinc finger protein 737 
ZNF626                0.470   zinc finger protein 626 isoform 1 
ZNF565                0.468   zinc finger protein 565 
ZNF565                0.468   zinc finger protein 565 
ZNF595                0.466   zinc finger protein 595 
ZNF429                0.465   zinc finger protein 429 
DKFZp686E2433         0.465   hypothetical protein LOC345462 
ZNF420                0.464   zinc finger protein 420 
ZNF568                0.463   zinc finger protein 568 
ZNF253                0.463   zinc finger protein 253 
ZNF454                0.461   zinc finger protein 454 
ZNF189                0.460   zinc finger protein 189 isoform 1 
ZNF157                0.457   zinc finger protein 157 
ZNF25                 0.456   zinc finger protein 25 
ZNF30                 0.455   zinc finger protein 30 isoform b 
ZNF730                0.453   PREDICTED: zinc finger protein 730 
ZNF730                0.453   PREDICTED: zinc finger protein 730 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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