Guide to the Human Genome
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Name: ZNF85 Sequence: fasta or formatted (595aa) NCBI GI: 169790765
Description:

zinc finger protein 85

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4         20           1
 C cysteine            6.7         40           1
 D aspartate           1.3          8           1
 E glutamate           8.7         52           2
 F phenylalanine       4.4         26           1
 G glycine             6.1         36           2
 H histidine           6.9         41           1
 I isoleucine          5.2         31           2
 K lysine             16.5         98           3
 L leucine             5.2         31           1
 M methionine          1.3          8           1
 N asparagine          4.2         25           1
 P proline             3.4         20           1
 Q glutamine           2.9         17           1
 R arginine            3.0         18           1
 S serine              6.2         37           2
 T threonine           8.6         51           2
 V valine              2.0         12           1
 W tryptophan          1.0          6           1
 Y tyrosine            3.0         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 85 
ZNF726                0.724   PREDICTED: zinc finger protein 726 
ZNF726                0.724   PREDICTED: zinc finger protein 726 
ZNF726                0.724   PREDICTED: zinc finger protein 726 
ZNF93                 0.723   zinc finger protein 93 
ZNF429                0.720   zinc finger protein 429 
ZNF681                0.717   zinc finger protein 681 
ZNF66                 0.717   PREDICTED: zinc finger protein 66 
ZNF66                 0.717   PREDICTED: zinc finger protein 66 
ZNF66                 0.717   PREDICTED: zinc finger protein 66 
ZNF737                0.716   PREDICTED: zinc finger protein 737 
ZNF737                0.716   PREDICTED: zinc finger protein 737 
ZNF737                0.716   PREDICTED: zinc finger protein 737 
ZNF708                0.712   zinc finger protein 708 
ZNF43                 0.711   zinc finger protein 43 
ZNF254                0.706   zinc finger protein 254 
ZNF675                0.704   zinc finger protein 675 
ZNF493                0.698   zinc finger protein 493 isoform 3 
ZNF92                 0.698   zinc finger protein 92 isoform 2 
ZNF728                0.693   PREDICTED: zinc finger protein 728 
ZNF728                0.692   PREDICTED: zinc finger protein 728 
ZNF728                0.692   PREDICTED: zinc finger protein 728 
ZNF208                0.687   zinc finger protein 208 
ZNF99                 0.685   zinc finger protein 99 
ZNF90                 0.681   zinc finger protein 90 
ZNF91                 0.679   zinc finger protein 91 
ZNF737                0.672   zinc finger protein 737 
ZNF257                0.667   zinc finger protein 257 
ZNF98                 0.661   zinc finger protein 98 
ZNF676                0.653   zinc finger protein 676 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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