GSDMB 481

Name: GSDMB	Sequence: fasta or formatted (403aa)		NCBI GI: 109689703
Description: gasdermin-like isoform 1		Referenced in: Stomach, Small Intestine, and Colon
Other entries for this name: alt prot [394aa] gasdermin-like isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 19 2 C cysteine 1.2 5 1 D aspartate 7.2 29 1 E glutamate 9.9 40 2 F phenylalanine 4.0 16 2 G glycine 5.2 21 2 H histidine 1.7 7 2 I isoleucine 4.7 19 1 K lysine 7.7 31 2 L leucine 12.9 52 2 M methionine 2.5 10 1 N asparagine 2.7 11 1 P proline 3.0 12 2 Q glutamine 4.5 18 2 R arginine 5.5 22 1 S serine 8.4 34 2 T threonine 4.7 19 2 V valine 6.7 27 3 W tryptophan 0.7 3 1 Y tyrosine 2.0 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 gasdermin-like isoform 1 GSDMB 0.965 gasdermin-like isoform 2 GSDMA 0.144 gasdermin 1 GSDMD 0.082 gasdermin D GSDMC 0.030 melanoma-derived leucine zipper, extra-nuclear facto... DFNA5 0.022 deafness, autosomal dominant 5 protein isoform a [Hom... DFNA5 0.022 deafness, autosomal dominant 5 protein isoform a [H... DFNB59 0.017 deafness, autosomal recessive 59 EEA1 0.017 early endosome antigen 1, 162kD KTN1 0.017 kinectin 1 isoform b KTN1 0.017 kinectin 1 isoform a KTN1 0.017 kinectin 1 isoform c KTN1 0.017 kinectin 1 isoform a GOLGA4 0.013 golgi autoantigen, golgin subfamily a, 4 CEP152 0.013 centrosomal protein 152kDa CEP290 0.013 centrosomal protein 290kDa CCDC110 0.013 coiled-coil domain containing 110 isoform b CCDC110 0.013 coiled-coil domain containing 110 isoform a MYH8 0.012 myosin, heavy chain 8, skeletal muscle, perinatal [... LRRFIP1 0.012 leucine rich repeat (in FLII) interacting protein 1... LRRFIP1 0.012 leucine rich repeat (in FLII) interacting protein 1... LRRFIP1 0.012 leucine rich repeat (in FLII) interacting protein 1... IQGAP3 0.012 IQ motif containing GTPase activating protein 3 [Hom... MYH7 0.010 myosin, heavy chain 7, cardiac muscle, beta RABEP1 0.010 rabaptin, RAB GTPase binding effector protein 1 iso... SH3BP1 0.010 SH3-domain binding protein 1 RABEP1 0.010 rabaptin, RAB GTPase binding effector protein 1 isof... NBPF11 0.009 hypothetical protein LOC728912 LOC200030 0.009 neuroblastoma breakpoint family, member 11-like [Ho... SMC2 0.009 structural maintenance of chromosomes 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.