RABEP1 3327

Name: RABEP1	Sequence: fasta or formatted (829aa)		NCBI GI: 134152674
Description: rabaptin, RAB GTPase binding effector protein 1 isoform 2		Referenced in: Rab
Other entries for this name: alt prot [862aa] rabaptin, RAB GTPase binding effector protein 1 isoform 1
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 64 2 C cysteine 0.8 7 1 D aspartate 5.9 49 2 E glutamate 13.6 113 3 F phenylalanine 1.8 15 1 G glycine 2.8 23 1 H histidine 1.9 16 1 I isoleucine 3.5 29 2 K lysine 8.0 66 3 L leucine 12.2 101 3 M methionine 2.5 21 1 N asparagine 3.5 29 1 P proline 1.6 13 1 Q glutamine 10.3 85 3 R arginine 5.8 48 3 S serine 7.1 59 2 T threonine 3.9 32 2 V valine 5.2 43 2 W tryptophan 0.6 5 1 Y tyrosine 1.3 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 rabaptin, RAB GTPase binding effector protein 1 iso... RABEP1 0.989 rabaptin, RAB GTPase binding effector protein 1 isof... RABEP2 0.121 rabaptin, RAB GTPase binding effector protein 2 [Ho... GOLGA4 0.051 golgi autoantigen, golgin subfamily a, 4 CEP250 0.051 centrosomal protein 2 MYH11 0.049 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.049 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.048 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.048 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... KTN1 0.048 kinectin 1 isoform c CENPE 0.048 centromere protein E CROCC 0.047 ciliary rootlet coiled-coil PLEC1 0.047 plectin 1 isoform 11 PLEC1 0.047 plectin 1 isoform 10 PLEC1 0.047 plectin 1 isoform 8 PLEC1 0.047 plectin 1 isoform 7 PLEC1 0.047 plectin 1 isoform 6 PLEC1 0.047 plectin 1 isoform 3 PLEC1 0.047 plectin 1 isoform 2 PLEC1 0.047 plectin 1 isoform 1 MYH1 0.045 myosin, heavy chain 1, skeletal muscle, adult [Homo... MYH2 0.045 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.045 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH9 0.045 myosin, heavy polypeptide 9, non-muscle KTN1 0.045 kinectin 1 isoform b MYH15 0.045 myosin, heavy polypeptide 15 KTN1 0.044 kinectin 1 isoform a KTN1 0.044 kinectin 1 isoform a LOC440243 0.043 PREDICTED: Putative golgin subfamily A member 6-lik... TCHH 0.043 trichohyalin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.