RABEP1 25456

Name: RABEP1	Sequence: fasta or formatted (862aa)		NCBI GI: 31377798
Description: rabaptin, RAB GTPase binding effector protein 1 isoform 1		Referenced in: Rab
Other entries for this name: alt prot [829aa] rabaptin, RAB GTPase binding effector protein 1 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.7 66 2 C cysteine 0.8 7 1 D aspartate 5.7 49 2 E glutamate 13.9 120 3 F phenylalanine 1.7 15 1 G glycine 2.7 23 1 H histidine 1.9 16 1 I isoleucine 3.6 31 2 K lysine 8.2 71 3 L leucine 12.4 107 3 M methionine 2.4 21 1 N asparagine 3.4 29 1 P proline 1.5 13 1 Q glutamine 10.3 89 3 R arginine 5.7 49 3 S serine 7.3 63 2 T threonine 3.9 34 2 V valine 5.0 43 2 W tryptophan 0.6 5 1 Y tyrosine 1.3 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 rabaptin, RAB GTPase binding effector protein 1 isof... RABEP1 0.954 rabaptin, RAB GTPase binding effector protein 1 iso... RABEP2 0.101 rabaptin, RAB GTPase binding effector protein 2 [Ho... CEP250 0.059 centrosomal protein 2 MYH10 0.057 myosin, heavy polypeptide 10, non-muscle MYH8 0.054 myosin, heavy chain 8, skeletal muscle, perinatal [... MYH9 0.053 myosin, heavy polypeptide 9, non-muscle CENPE 0.053 centromere protein E PLEC1 0.052 plectin 1 isoform 11 PLEC1 0.052 plectin 1 isoform 10 PLEC1 0.052 plectin 1 isoform 8 PLEC1 0.052 plectin 1 isoform 7 PLEC1 0.052 plectin 1 isoform 6 PLEC1 0.052 plectin 1 isoform 3 PLEC1 0.052 plectin 1 isoform 2 PLEC1 0.052 plectin 1 isoform 1 MYH11 0.052 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.052 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.052 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.052 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... MYH15 0.048 myosin, heavy polypeptide 15 EEA1 0.048 early endosome antigen 1, 162kD MYH2 0.048 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH2 0.048 myosin, heavy chain 2, skeletal muscle, adult [Homo... MYH1 0.047 myosin, heavy chain 1, skeletal muscle, adult [Homo... MYH7 0.046 myosin, heavy chain 7, cardiac muscle, beta TCHH 0.046 trichohyalin MYH13 0.046 myosin, heavy polypeptide 13, skeletal muscle [Homo... CROCC 0.046 ciliary rootlet coiled-coil DSP 0.046 desmoplakin isoform I Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.