Search of human proteins with 14249478

Search of human proteins with 14249478

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14249478 hypothetical protein LOC84886 isoform 1 [Homo
sapiens]
         (327 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14249478 hypothetical protein LOC84886 isoform 1 [Homo sapiens]    655   0.0  
gi|211063485 hypothetical protein LOC84886 isoform 2 [Homo sapiens]   584   e-167
gi|211064487 hypothetical protein LOC84886 isoform 3 [Homo sapiens]   390   e-109
gi|239750815 PREDICTED: StAR-related lipid transfer (START) doma...    40   0.002
gi|239745175 PREDICTED: StAR-related lipid transfer (START) doma...    40   0.002
gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H...    40   0.002
gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H...    40   0.002
gi|239756270 PREDICTED: StAR-related lipid transfer (START) doma...    40   0.003
gi|223972704 hypothetical protein LOC284418 [Homo sapiens]             40   0.004
gi|209862789 microtubule associated monoxygenase, calponin and L...    40   0.004
gi|238624188 diffuse panbronchiolitis critical region 1 protein ...    38   0.011
gi|95147555 microtubule-associated protein 1A [Homo sapiens]           38   0.011
gi|116268091 PHD finger protein 23 [Homo sapiens]                      37   0.024
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]         37   0.024
gi|20336260 retinoblastoma protein-binding zinc finger protein i...    37   0.024
gi|20336258 retinoblastoma protein-binding zinc finger protein i...    37   0.024
gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]     37   0.024
gi|118498345 AT-binding transcription factor 1 [Homo sapiens]          37   0.031
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa...    36   0.041
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]                36   0.053
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        36   0.053
gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sap...    35   0.070
gi|12751497 hypothetical protein LOC65265 [Homo sapiens]               35   0.070
gi|21327710 nucleosome assembly protein 1-like 3 [Homo sapiens]        35   0.091
gi|116325993 c114 SLIT-like testicular protein [Homo sapiens]          35   0.091
gi|110665701 leucine rich repeat containing 37A [Homo sapiens]         35   0.091
gi|58331253 obscurin, cytoskeletal calmodulin and titin-interact...    35   0.12 
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac...    35   0.12 
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]       35   0.12 
gi|217330641 IWS1 homolog [Homo sapiens]                               35   0.12 

>gi|14249478 hypothetical protein LOC84886 isoform 1 [Homo sapiens]
          Length = 327

 Score =  655 bits (1690), Expect = 0.0
 Identities = 327/327 (100%), Positives = 327/327 (100%)

Query: 1   MASMAAAIAASRSAVMSGNRPLDDRERKRFTYFSSLSPMARKIMQDKEKIREKYGPEWAR 60
           MASMAAAIAASRSAVMSGNRPLDDRERKRFTYFSSLSPMARKIMQDKEKIREKYGPEWAR
Sbjct: 1   MASMAAAIAASRSAVMSGNRPLDDRERKRFTYFSSLSPMARKIMQDKEKIREKYGPEWAR 60

Query: 61  LPPAQQDEIIDRCLVGPRAPAPRDPGDSEELTRFPGLRGPTGQKVVRFGDEDLTWQDEHS 120
           LPPAQQDEIIDRCLVGPRAPAPRDPGDSEELTRFPGLRGPTGQKVVRFGDEDLTWQDEHS
Sbjct: 61  LPPAQQDEIIDRCLVGPRAPAPRDPGDSEELTRFPGLRGPTGQKVVRFGDEDLTWQDEHS 120

Query: 121 APFSWETKSQMEFSISALSIQEPSNGTAASEPRPLSKASQGSQALKSSQGSRSSSLDALG 180
           APFSWETKSQMEFSISALSIQEPSNGTAASEPRPLSKASQGSQALKSSQGSRSSSLDALG
Sbjct: 121 APFSWETKSQMEFSISALSIQEPSNGTAASEPRPLSKASQGSQALKSSQGSRSSSLDALG 180

Query: 181 PTRKEEEASFWKINAERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKDREA 240
           PTRKEEEASFWKINAERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKDREA
Sbjct: 181 PTRKEEEASFWKINAERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKDREA 240

Query: 241 KVERPSTLRQEQRPLPNVSTERERPQPVQAFSSALHEAAPSQLEGKLPSPDVRQDDGEDT 300
           KVERPSTLRQEQRPLPNVSTERERPQPVQAFSSALHEAAPSQLEGKLPSPDVRQDDGEDT
Sbjct: 241 KVERPSTLRQEQRPLPNVSTERERPQPVQAFSSALHEAAPSQLEGKLPSPDVRQDDGEDT 300

Query: 301 LFSEPKFAQVSSSNVVLKTGFDFLDNW 327
           LFSEPKFAQVSSSNVVLKTGFDFLDNW
Sbjct: 301 LFSEPKFAQVSSSNVVLKTGFDFLDNW 327


>gi|211063485 hypothetical protein LOC84886 isoform 2 [Homo sapiens]
          Length = 289

 Score =  584 bits (1506), Expect = e-167
 Identities = 289/289 (100%), Positives = 289/289 (100%)

Query: 39  MARKIMQDKEKIREKYGPEWARLPPAQQDEIIDRCLVGPRAPAPRDPGDSEELTRFPGLR 98
           MARKIMQDKEKIREKYGPEWARLPPAQQDEIIDRCLVGPRAPAPRDPGDSEELTRFPGLR
Sbjct: 1   MARKIMQDKEKIREKYGPEWARLPPAQQDEIIDRCLVGPRAPAPRDPGDSEELTRFPGLR 60

Query: 99  GPTGQKVVRFGDEDLTWQDEHSAPFSWETKSQMEFSISALSIQEPSNGTAASEPRPLSKA 158
           GPTGQKVVRFGDEDLTWQDEHSAPFSWETKSQMEFSISALSIQEPSNGTAASEPRPLSKA
Sbjct: 61  GPTGQKVVRFGDEDLTWQDEHSAPFSWETKSQMEFSISALSIQEPSNGTAASEPRPLSKA 120

Query: 159 SQGSQALKSSQGSRSSSLDALGPTRKEEEASFWKINAERSRGEGPEAEFQSLTPSQIKSM 218
           SQGSQALKSSQGSRSSSLDALGPTRKEEEASFWKINAERSRGEGPEAEFQSLTPSQIKSM
Sbjct: 121 SQGSQALKSSQGSRSSSLDALGPTRKEEEASFWKINAERSRGEGPEAEFQSLTPSQIKSM 180

Query: 219 EKGEKVLPPCYRQEPAPKDREAKVERPSTLRQEQRPLPNVSTERERPQPVQAFSSALHEA 278
           EKGEKVLPPCYRQEPAPKDREAKVERPSTLRQEQRPLPNVSTERERPQPVQAFSSALHEA
Sbjct: 181 EKGEKVLPPCYRQEPAPKDREAKVERPSTLRQEQRPLPNVSTERERPQPVQAFSSALHEA 240

Query: 279 APSQLEGKLPSPDVRQDDGEDTLFSEPKFAQVSSSNVVLKTGFDFLDNW 327
           APSQLEGKLPSPDVRQDDGEDTLFSEPKFAQVSSSNVVLKTGFDFLDNW
Sbjct: 241 APSQLEGKLPSPDVRQDDGEDTLFSEPKFAQVSSSNVVLKTGFDFLDNW 289


>gi|211064487 hypothetical protein LOC84886 isoform 3 [Homo sapiens]
          Length = 197

 Score =  390 bits (1003), Expect = e-109
 Identities = 197/197 (100%), Positives = 197/197 (100%)

Query: 131 MEFSISALSIQEPSNGTAASEPRPLSKASQGSQALKSSQGSRSSSLDALGPTRKEEEASF 190
           MEFSISALSIQEPSNGTAASEPRPLSKASQGSQALKSSQGSRSSSLDALGPTRKEEEASF
Sbjct: 1   MEFSISALSIQEPSNGTAASEPRPLSKASQGSQALKSSQGSRSSSLDALGPTRKEEEASF 60

Query: 191 WKINAERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKDREAKVERPSTLRQ 250
           WKINAERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKDREAKVERPSTLRQ
Sbjct: 61  WKINAERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKDREAKVERPSTLRQ 120

Query: 251 EQRPLPNVSTERERPQPVQAFSSALHEAAPSQLEGKLPSPDVRQDDGEDTLFSEPKFAQV 310
           EQRPLPNVSTERERPQPVQAFSSALHEAAPSQLEGKLPSPDVRQDDGEDTLFSEPKFAQV
Sbjct: 121 EQRPLPNVSTERERPQPVQAFSSALHEAAPSQLEGKLPSPDVRQDDGEDTLFSEPKFAQV 180

Query: 311 SSSNVVLKTGFDFLDNW 327
           SSSNVVLKTGFDFLDNW
Sbjct: 181 SSSNVVLKTGFDFLDNW 197


>gi|239750815 PREDICTED: StAR-related lipid transfer (START) domain
            containing 9 [Homo sapiens]
          Length = 4614

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 42/122 (34%), Positives = 53/122 (43%), Gaps = 25/122 (20%)

Query: 197  RSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKDREAKVERPSTLRQEQRPLP 256
            R+ GE P     SL      S E G+  L P           E KV+  S        LP
Sbjct: 2522 RNEGEAPGFHVASL------SAEAGQIDLLP----------DERKVQATSLSADSFESLP 2565

Query: 257  NVSTERERPQPVQAFSSALHEAAPSQLEGKLPSPDVRQDDGEDTLFSEPKFAQVSSSNVV 316
            N  T+RE   PVQAFS     AAP+Q + K  + ++RQ  G     SEP     SSS ++
Sbjct: 2566 NTETDREPWDPVQAFS----HAAPAQ-DRKRRTGELRQFAGA----SEPFICHSSSSEII 2616

Query: 317  LK 318
             K
Sbjct: 2617 EK 2618



 Score = 35.8 bits (81), Expect = 0.053
 Identities = 46/194 (23%), Positives = 77/194 (39%), Gaps = 34/194 (17%)

Query: 59   ARLPPAQQDEIIDRCLV--GPRAPAPRDPGDSEELTRFPGLRGPTGQKVVRFGDEDLTWQ 116
            A LPP+ Q E    CLV   P   +P  PG     + +PG      +   + G     + 
Sbjct: 3754 AFLPPSSQPEE-SYCLVVSSPSPSSPHSPGLFPSTSEYPG----DSRVQKKLGPTSALFV 3808

Query: 117  DEHSAPFSWETKSQMEFSIS--ALSIQEPSNGTAASEPR-------------PLSKASQG 161
            D  S+P    + S  E  +S  +L++  PS        +             P+   SQ 
Sbjct: 3809 DRASSPILTLSASTQEPGLSPGSLTLSAPSTHPVEGHQKLDSSPDPVDAPRTPMDNYSQT 3868

Query: 162  SQALKSSQGSRSSSLDALGPTRKEEEASFWKINAERSRGEGPEAEFQSL--TPSQIK--- 216
            +  L  SQ  RSS        ++    SF ++++  S  + P+ +F  L   P Q++   
Sbjct: 3869 TDELGGSQRGRSS-------LQRSNGRSFLELHSPHSPQQSPKLQFSFLGQHPQQLQPRT 3921

Query: 217  SMEKGEKVLPPCYR 230
            ++    ++LPP  R
Sbjct: 3922 TIGVQSRLLPPPLR 3935


>gi|239745175 PREDICTED: StAR-related lipid transfer (START) domain
            containing 9 [Homo sapiens]
          Length = 4614

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 42/122 (34%), Positives = 53/122 (43%), Gaps = 25/122 (20%)

Query: 197  RSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKDREAKVERPSTLRQEQRPLP 256
            R+ GE P     SL      S E G+  L P           E KV+  S        LP
Sbjct: 2522 RNEGEAPGFHVASL------SAEAGQIDLLP----------DERKVQATSLSADSFESLP 2565

Query: 257  NVSTERERPQPVQAFSSALHEAAPSQLEGKLPSPDVRQDDGEDTLFSEPKFAQVSSSNVV 316
            N  T+RE   PVQAFS     AAP+Q + K  + ++RQ  G     SEP     SSS ++
Sbjct: 2566 NTETDREPWDPVQAFS----HAAPAQ-DRKRRTGELRQFAGA----SEPFICHSSSSEII 2616

Query: 317  LK 318
             K
Sbjct: 2617 EK 2618



 Score = 35.8 bits (81), Expect = 0.053
 Identities = 46/194 (23%), Positives = 77/194 (39%), Gaps = 34/194 (17%)

Query: 59   ARLPPAQQDEIIDRCLV--GPRAPAPRDPGDSEELTRFPGLRGPTGQKVVRFGDEDLTWQ 116
            A LPP+ Q E    CLV   P   +P  PG     + +PG      +   + G     + 
Sbjct: 3754 AFLPPSSQPEE-SYCLVVSSPSPSSPHSPGLFPSTSEYPG----DSRVQKKLGPTSALFV 3808

Query: 117  DEHSAPFSWETKSQMEFSIS--ALSIQEPSNGTAASEPR-------------PLSKASQG 161
            D  S+P    + S  E  +S  +L++  PS        +             P+   SQ 
Sbjct: 3809 DRASSPILTLSASTQEPGLSPGSLTLSAPSTHPVEGHQKLDSSPDPVDAPRTPMDNYSQT 3868

Query: 162  SQALKSSQGSRSSSLDALGPTRKEEEASFWKINAERSRGEGPEAEFQSL--TPSQIK--- 216
            +  L  SQ  RSS        ++    SF ++++  S  + P+ +F  L   P Q++   
Sbjct: 3869 TDELGGSQRGRSS-------LQRSNGRSFLELHSPHSPQQSPKLQFSFLGQHPQQLQPRT 3921

Query: 217  SMEKGEKVLPPCYR 230
            ++    ++LPP  R
Sbjct: 3922 TIGVQSRLLPPPLR 3935


>gi|53832011 calcium channel, voltage-dependent, T type, alpha 1H
            subunit isoform b [Homo sapiens]
          Length = 2347

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 15/158 (9%)

Query: 141  QEPSNGTAASEPRPLSKASQGSQALKSSQGSRSS----SLDALG----PTRKEEEASFWK 192
            +E S+ T+++ P   +    G +A   + G R      S+DA G    P R +E+   W+
Sbjct: 2093 EEVSHITSSACPWQPTAEPHGPEASPVAGGERDLRRLYSVDAQGFLDKPGRADEQ---WR 2149

Query: 193  INAERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKD----REAKVERPSTL 248
             +AE   GE  EA+             + +K+ PPC   EP  +D    R +  E  ST 
Sbjct: 2150 PSAELGSGEPGEAKAWGPEAEPALGARRKKKMSPPCISVEPPAEDEGSARPSAAEGGSTT 2209

Query: 249  RQEQRPLPNVSTERERPQPVQAFSSALHEAAPSQLEGK 286
             + + P    +  R+  +P +   +    AA  +  G+
Sbjct: 2210 LRRRTPSCEATPHRDSLEPTEGSGAGGDPAAKGERWGQ 2247


>gi|53832009 calcium channel, voltage-dependent, T type, alpha 1H
            subunit isoform a [Homo sapiens]
          Length = 2353

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 39/158 (24%), Positives = 67/158 (42%), Gaps = 15/158 (9%)

Query: 141  QEPSNGTAASEPRPLSKASQGSQALKSSQGSRSS----SLDALG----PTRKEEEASFWK 192
            +E S+ T+++ P   +    G +A   + G R      S+DA G    P R +E+   W+
Sbjct: 2099 EEVSHITSSACPWQPTAEPHGPEASPVAGGERDLRRLYSVDAQGFLDKPGRADEQ---WR 2155

Query: 193  INAERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKD----REAKVERPSTL 248
             +AE   GE  EA+             + +K+ PPC   EP  +D    R +  E  ST 
Sbjct: 2156 PSAELGSGEPGEAKAWGPEAEPALGARRKKKMSPPCISVEPPAEDEGSARPSAAEGGSTT 2215

Query: 249  RQEQRPLPNVSTERERPQPVQAFSSALHEAAPSQLEGK 286
             + + P    +  R+  +P +   +    AA  +  G+
Sbjct: 2216 LRRRTPSCEATPHRDSLEPTEGSGAGGDPAAKGERWGQ 2253


>gi|239756270 PREDICTED: StAR-related lipid transfer (START) domain
            containing 9 [Homo sapiens]
          Length = 4614

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 42/122 (34%), Positives = 53/122 (43%), Gaps = 25/122 (20%)

Query: 197  RSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKDREAKVERPSTLRQEQRPLP 256
            R+ GE P     SL      S E G+  L P           E KV+  S        LP
Sbjct: 2522 RNEGEAPGFHVASL------SAEAGQIDLLP----------DERKVQATSLSADSFESLP 2565

Query: 257  NVSTERERPQPVQAFSSALHEAAPSQLEGKLPSPDVRQDDGEDTLFSEPKFAQVSSSNVV 316
            N  T+RE   PVQAFS     AAP+Q + K  + ++RQ  G     SEP     SSS ++
Sbjct: 2566 NTETDREPWDPVQAFS----HAAPAQ-DRKHRTGELRQFAGA----SEPFICHSSSSEII 2616

Query: 317  LK 318
             K
Sbjct: 2617 EK 2618



 Score = 35.8 bits (81), Expect = 0.053
 Identities = 46/194 (23%), Positives = 77/194 (39%), Gaps = 34/194 (17%)

Query: 59   ARLPPAQQDEIIDRCLV--GPRAPAPRDPGDSEELTRFPGLRGPTGQKVVRFGDEDLTWQ 116
            A LPP+ Q E    CLV   P   +P  PG     + +PG      +   + G     + 
Sbjct: 3754 AFLPPSSQPEE-SYCLVVSSPSPSSPHSPGLFPSTSEYPG----DSRVQKKLGPTSALFV 3808

Query: 117  DEHSAPFSWETKSQMEFSIS--ALSIQEPSNGTAASEPR-------------PLSKASQG 161
            D  S+P    + S  E  +S  +L++  PS        +             P+   SQ 
Sbjct: 3809 DRASSPILTLSASTQEPGLSPGSLTLSAPSTHPVEGHQKLDSSPDPVDAPRTPMDNYSQT 3868

Query: 162  SQALKSSQGSRSSSLDALGPTRKEEEASFWKINAERSRGEGPEAEFQSL--TPSQIK--- 216
            +  L  SQ  RSS        ++    SF ++++  S  + P+ +F  L   P Q++   
Sbjct: 3869 TDELGGSQRGRSS-------LQRSNGRSFLELHSPHSPQQSPKLQFSFLGQHPQQLQPRT 3921

Query: 217  SMEKGEKVLPPCYR 230
            ++    ++LPP  R
Sbjct: 3922 TIGVQSRLLPPPLR 3935


>gi|223972704 hypothetical protein LOC284418 [Homo sapiens]
          Length = 922

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 54/210 (25%), Positives = 83/210 (39%), Gaps = 29/210 (13%)

Query: 118 EHSAPFSWETKSQMEFSISALSIQEPSNGTAASEPRPLSKASQGS-QALKSSQGSRSSSL 176
           EHS PFS E  +  +  I+A S ++PS     S P  L    Q S  ++ +S  SR   L
Sbjct: 686 EHSRPFSVEALTLTKLMITANSKEQPSKSALVSLPSWLLATPQASATSMMASVPSRPGQL 745

Query: 177 DALG----PTRKEEEASFWKINAERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQE 232
             L       R++ E+  W    +R  GE             +K    GE   PP   + 
Sbjct: 746 SLLEGKPVVVREQPESHTWVKEGKRPWGE-------------MKEQPWGEMKEPPWDPKG 792

Query: 233 PAPKDREAKVERPSTLRQ--EQRPLPNVSTERE--RPQPV-QAFSSALHEAAPSQLEGKL 287
           P      +K    S  R+   Q P+P  ++  E  RP P+ +   S +   A +  + K 
Sbjct: 793 PPKVPFRSKPTSASLKREGISQAPIPLTASPWEDLRPSPLSETLISKMEATARASQQPKR 852

Query: 288 PSPDVRQDDGEDTLFSEPKFAQVSSSNVVL 317
            S +  +   +  L      A V SS+ +L
Sbjct: 853 VSQEPMRMPAQHPL------ATVGSSSEIL 876


>gi|209862789 microtubule associated monoxygenase, calponin and LIM
            domain containing 3 isoform 1 [Homo sapiens]
          Length = 2002

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 42/177 (23%), Positives = 71/177 (40%), Gaps = 7/177 (3%)

Query: 77   PRAPAPRDPGDSEELTRFPGLRG-----PTGQKVVRFGDEDLTWQDEHSAPFSWETKSQM 131
            PR   PR P  ++E  R P L G       G  +V    ++L  +   +   S ++++  
Sbjct: 1551 PRPEKPRHPPLAKENGRLPALEGTLQPQKRGLPLVSAEAKELAEERMRAREKSVKSQALR 1610

Query: 132  EFSISALS-IQEPSNGTAASEPRPLSKASQGSQALKSSQGSRSSSLDALGPTRKEEEASF 190
            +     LS +Q+    + A  PR  S A    +  +    +R +   +  PT K E  S 
Sbjct: 1611 DAMARQLSRMQQMELASGAPRPRKASSAPSQGKERRPDSPTRPTLRGSEEPTLKHEATSE 1670

Query: 191  WKINAERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKDREAKVERPST 247
              ++     G GP+  F S   S  KS ++     P   ++E   K      E+PS+
Sbjct: 1671 EVLSPPSDSG-GPDGSFTSSEGSSGKSKKRSSLFSPRRNKKEKKSKGEGRPPEKPSS 1726


>gi|238624188 diffuse panbronchiolitis critical region 1 protein [Homo
            sapiens]
          Length = 1393

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 58/297 (19%), Positives = 99/297 (33%), Gaps = 32/297 (10%)

Query: 10   ASRSAVMSGNRPLDDRERKRFTYFSSLSPMARKIMQDKEKIREKYGPEWARLPPAQQDEI 69
            A+ +   S   P ++RER       + +    +   +  + RE    E     PA+  E 
Sbjct: 811  ANENTTSSPAEPTENRER-------TANEKTTQFPAEPTENRESTANEKTTPFPAEPTEN 863

Query: 70   IDRCLVGPRAPAPRDPGDSEELTRFPGLRGPTGQKVVRFGDEDLTWQDEHSAPFSWETKS 129
             +         +P +P + EE+T     +            E   + +E + P S E   
Sbjct: 864  REWTANENTTLSPAEPTEHEEMTPLANEKTTLSPAEPTENGERTPFTNEKTTPSSAEPTE 923

Query: 130  QMEFSISALSIQEPSNGTAASEPRPLSKASQGSQALKSSQGSRSSSLDALGPTRKEEEAS 189
              E +  A  I  PS          ++         K ++   ++  +   P+  E   +
Sbjct: 924  HGERTPLANEITTPSRAEPTEHGERIANEKATPSPAKPTEHGETTVNEDTTPSSAEPTEN 983

Query: 190  FWKINAERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKDREAKVERPSTLR 249
                      GE      ++ T S  +S E GE+      +  P+P +     ER  +  
Sbjct: 984  ----------GERTPLANENTTTSPTESTEHGERTANE--KTTPSPAEPTEHGERTPSAN 1031

Query: 250  QEQRPLPNVSTERERPQPVQAFSSALHEAAPSQLEGKLPSPDVRQDDGEDTLFSEPK 306
            ++  P P   TE E             E  PS  E   PSP    + GE T  +  K
Sbjct: 1032 EKTIPSPAKPTEHE-------------EMTPSANENTTPSPVKPTEHGEKTTLANEK 1075



 Score = 33.5 bits (75), Expect = 0.26
 Identities = 52/260 (20%), Positives = 88/260 (33%), Gaps = 30/260 (11%)

Query: 51  REKYGPEWARLPPAQQDEIIDRCLVGPRAPAPRDPGDSEELTR------FPGLRGPTGQK 104
           RE+   E   L PA+  E  +R      AP P  P ++ E+T       FP      G++
Sbjct: 308 RERTANENTTLSPAEPIENRERTANENTAPFPAGPTENREMTANENTTLFPAEPTEHGER 367

Query: 105 VVRFGDEDLTWQDEHSAPFSWETKSQMEFSISALSIQEPSNGTAASEPRPLSKASQGSQA 164
                       +E++ P   E     E + +  +   P+  T   E  P +     S +
Sbjct: 368 TA----------NENTTPSPAEPTEHGERTANENTTPSPAEPTEHGERTPFANDKTTSSS 417

Query: 165 LKSSQGSRSSSLDALGPTRKEEEASFWKINAERSRGEGPEAEFQSLTPSQIKSMEKGEKV 224
            +S++    + L     T    E +    N ER+  E          P++ +     EK 
Sbjct: 418 AESTEHGERTPLANENTTPSPAEPT---ENRERTANENTTP--SPAGPTENRETTANEKT 472

Query: 225 ----LPPCYRQEPAPKDREAKVERPSTLRQEQRPLPNVSTERERPQPVQAFSSALHEAAP 280
               + P   +E    ++        T   ++ P  N  T     +P +       E  P
Sbjct: 473 TLSPVEPTENRETTANEKTTPSPAEPTENGQRTPFANEKTTSSSAEPTEH-----GERTP 527

Query: 281 SQLEGKLPSPDVRQDDGEDT 300
              E   PSP    ++ E T
Sbjct: 528 LANENTTPSPAEPTENRERT 547


>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
          Length = 2803

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 62/249 (24%), Positives = 88/249 (35%), Gaps = 41/249 (16%)

Query: 60   RLPPAQQDEIIDRCL-----VGPRAPAPRDPGDSEELTRFPGLRGPTGQKVVRFGDEDLT 114
            +L PAQ   I+   +      GP   A   PG    L + PG   P   +V+R+ D  L+
Sbjct: 1089 QLLPAQDKAIVFEIMEAGEPTGPILGAEALPGGLRTLPQEPGK--PQKDEVLRYPDRSLS 1146

Query: 115  WQDEHSAPFSWETKSQMEFSISALSIQEPSNGTAASEPRPLSKASQGSQALKSSQGSRSS 174
             +D  S              +S LS+  PS  TA  EP P S      Q L   +    S
Sbjct: 1147 PEDAES--------------LSVLSV--PSPDTANQEPTPKSPCGLTEQYLHKDRWPEVS 1190

Query: 175  SLDALGPTRKEEEASFWKINAERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQE-- 232
              D    +  EE  S        S+   PE    SL   Q   +  G++ +    + E  
Sbjct: 1191 PEDTQSLSLSEESPSKETSLDVSSKQLSPE----SLGTLQFGELNLGKEEMGHLMQAEDT 1246

Query: 233  ---------PAPKDREAKVERPSTLRQE-QRPLPNVSTERERPQPVQAFSSALHEAAPSQ 282
                     P P    A      T R   Q  + + S +R+   P  +FS +        
Sbjct: 1247 SHHTAPMSVPEPHAATASPPTDGTTRYSAQTDITDDSLDRK--SPASSFSHSTPSGNGKY 1304

Query: 283  LEGKLPSPD 291
            L G + SPD
Sbjct: 1305 LPGAITSPD 1313


>gi|116268091 PHD finger protein 23 [Homo sapiens]
          Length = 403

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 29/205 (14%)

Query: 135 ISALSIQEPSNGTAASEPRPLSKASQGSQALKSSQGSRSSSLDALGPTRKEEEASFWKIN 194
           +S  S+   S   AA  P PLS+        K  + +R      LGP      A F  + 
Sbjct: 149 LSPTSLTHTSRPPAALTPVPLSQGDLSHPPRKKDRKNRK-----LGPGAG---AGFGVLR 200

Query: 195 AER-SRGEGPE-AEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKDREAKVERPSTLRQEQ 252
             R + G+G + +  +     ++K  E+G+++ PP   Q P P D +++ E      +E+
Sbjct: 201 RPRPTPGDGEKRSRIKKSKKRKLKKAERGDRLPPPGPPQAP-PSDTDSEEEEEEEEEEEE 259

Query: 253 R----------PLPNVSTERERPQPVQAFSSALHE--AAPSQLEGKLPSPDVRQDDGEDT 300
                      P+P + T  E P+P     + +H     P+  E K         DG D 
Sbjct: 260 EEMATVVGGEAPVPVLPTPPEAPRP----PATVHPEGVPPADSESKEVGSTETSQDG-DA 314

Query: 301 LFSEPKFAQVSSSNVVLKTGFDFLD 325
             SE +  +V   ++++++G D  D
Sbjct: 315 SSSEGEM-RVMDEDIMVESGDDSWD 338


>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
          Length = 2968

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 42/169 (24%), Positives = 70/169 (41%), Gaps = 27/169 (15%)

Query: 120  SAPFSWETKSQMEFSISALSIQEPSNGTAASEPRPLSKASQGSQALKSSQGSRSSSLDAL 179
            ++P S  + S    S S+ S    S+ +++S     S +S  S +  SS  S SSS  + 
Sbjct: 2610 ASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2669

Query: 180  GPTRKEEEASFWKINAERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCY---RQEPAPK 236
              T  E+ +      A  +   GP A  Q+  P+  K+ ++  K  P  +   ++ PAP 
Sbjct: 2670 SSTTDEDSSCSSDDEAAPAPTAGPSA--QAALPT--KATKQAGKARPSAHSPGKKTPAP- 2724

Query: 237  DREAKVERPSTLRQEQRPLPNVSTERERPQPVQAFSSALHEAAPSQLEG 285
                         Q Q P P      +  QP+Q  + A  ++ P + EG
Sbjct: 2725 -------------QPQAPPP------QPTQPLQPKAQAGAKSRPKKREG 2754



 Score = 30.8 bits (68), Expect = 1.7
 Identities = 31/138 (22%), Positives = 46/138 (33%), Gaps = 28/138 (20%)

Query: 146  GTAASEPRPLSKASQGSQALKSSQGSRSSSLDALGPTRKEEEASFWKINAERSRGEGPEA 205
            GTA SE        +G +    ++G R+++L+   PT +                  P A
Sbjct: 2318 GTAGSEEPGAKARGRGRKPSAKAKGDRAATLEEGNPTDEVPST--------------PLA 2363

Query: 206  EFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKDREAKVERPSTLRQEQRPLPNVSTERERP 265
               S TP   KS               P P D+ AK  +      +  P P   T    P
Sbjct: 2364 LEPSSTPGSKKS--------------PPEPVDKRAKAPKARPAPPQPSPAPPAFTSCPAP 2409

Query: 266  QPVQAFSSALHEAAPSQL 283
            +P     +     AP+ L
Sbjct: 2410 EPFAELPAPATSLAPAPL 2427


>gi|20336260 retinoblastoma protein-binding zinc finger protein
           isoform b [Homo sapiens]
          Length = 1682

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 39/180 (21%), Positives = 66/180 (36%), Gaps = 17/180 (9%)

Query: 143 PSNGTAASEPRPLSKASQGS----QALKSSQGSRSSSLDALGPTRKEEEASFWKINAERS 198
           P    A  E R  +++ + S    +  K SQ +++          K  E  F   N  R 
Sbjct: 146 PEIAAAIEEERASARSKRSSPKSRKGKKKSQENKNKGNKIQDIQLKTSEPDFTSANM-RD 204

Query: 199 RGEGPEAEFQSLTPSQIKS----MEKGEKVLPP-------CYRQEPAPKDR-EAKVERPS 246
             EGP+ + +  + S ++      E   + +PP        +  +P P +R EA     +
Sbjct: 205 SAEGPKEDEEKPSASALEQPATLQEVASQEVPPELATPAPAWEPQPEPDERLEAAACEVN 264

Query: 247 TLRQEQRPLPNVSTERERPQPVQAFSSALHEAAPSQLEGKLPSPDVRQDDGEDTLFSEPK 306
            L +E+        E E             E A    E  +  P++R D+  + L  EPK
Sbjct: 265 DLGEEEEEEEEEDEEEEEDDDDDELEDEGEEEASMPNENSVKEPEIRCDEKPEDLLEEPK 324


>gi|20336258 retinoblastoma protein-binding zinc finger protein
           isoform a [Homo sapiens]
          Length = 1718

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 39/180 (21%), Positives = 66/180 (36%), Gaps = 17/180 (9%)

Query: 143 PSNGTAASEPRPLSKASQGS----QALKSSQGSRSSSLDALGPTRKEEEASFWKINAERS 198
           P    A  E R  +++ + S    +  K SQ +++          K  E  F   N  R 
Sbjct: 146 PEIAAAIEEERASARSKRSSPKSRKGKKKSQENKNKGNKIQDIQLKTSEPDFTSANM-RD 204

Query: 199 RGEGPEAEFQSLTPSQIKS----MEKGEKVLPP-------CYRQEPAPKDR-EAKVERPS 246
             EGP+ + +  + S ++      E   + +PP        +  +P P +R EA     +
Sbjct: 205 SAEGPKEDEEKPSASALEQPATLQEVASQEVPPELATPAPAWEPQPEPDERLEAAACEVN 264

Query: 247 TLRQEQRPLPNVSTERERPQPVQAFSSALHEAAPSQLEGKLPSPDVRQDDGEDTLFSEPK 306
            L +E+        E E             E A    E  +  P++R D+  + L  EPK
Sbjct: 265 DLGEEEEEEEEEDEEEEEDDDDDELEDEGEEEASMPNENSVKEPEIRCDEKPEDLLEEPK 324


>gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]
          Length = 951

 Score = 37.0 bits (84), Expect = 0.024
 Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 9/124 (7%)

Query: 136 SALSIQEPSNGTAASEPRPLSKASQGSQALKSSQGSRSSSLDALGPTRKEEEASFWKINA 195
           S  S++E S     + P PL    +    L+     R SS  +  P R+EE+    K + 
Sbjct: 709 SPFSVEESS-----TTPCPLLTGGRPLPTLEVKPPDRPSS-KSKDPPREEEKEKKKKKHK 762

Query: 196 ERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKDREAKVERPS---TLRQEQ 252
           +RSR      ++ S + S+ +S  K +  LP  YR     + R     R +     R+E+
Sbjct: 763 KRSRTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTVRRSRSRSRSPRRRAHSPERRREE 822

Query: 253 RPLP 256
           R +P
Sbjct: 823 RSVP 826


>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
          Length = 3703

 Score = 36.6 bits (83), Expect = 0.031
 Identities = 53/197 (26%), Positives = 77/197 (39%), Gaps = 29/197 (14%)

Query: 103  QKVVRFGDEDLTWQDEHSAPFSWETKSQMEFSISALSIQEPSNGTAASEPRPLSKASQGS 162
            QK + + DED   QD+          SQ E S+ A+ I  P++ ++ S P P    SQ  
Sbjct: 2347 QKKLCYKDEDEEGQDD----------SQNEDSMDAMEILTPTS-SSCSTPMP----SQAY 2391

Query: 163  QALKSSQGSRSSSLDALGPTRKEEEASFWKINAERSRGEGPEAEFQSLTPSQIKSMEKGE 222
             A   S  + +SS   L  T + EE + +    E    +   AE  S  P+Q  + EK  
Sbjct: 2392 SAPAPSANNTASSA-FLQLTAEAEELATFNSKTEAGDEKPKLAEAPSAQPNQ--TQEKQG 2448

Query: 223  KVLPPCYRQE-PAPKDREAKVERPSTLR-------QEQRPLPNVSTERERPQPVQAFS-- 272
            +  P   +QE P  K    + + P  +          Q P P     +  P P Q     
Sbjct: 2449 QPKPELQQQEQPEQKTNTPQQKLPQLVSLPSLPQPPPQAPPPQCPLPQSSPSPSQLSHLP 2508

Query: 273  -SALHEAAPSQLEGKLP 288
               LH + P QL    P
Sbjct: 2509 LKPLHTSTPQQLANLPP 2525


>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
           sapiens]
          Length = 699

 Score = 36.2 bits (82), Expect = 0.041
 Identities = 38/178 (21%), Positives = 72/178 (40%), Gaps = 15/178 (8%)

Query: 77  PRAPAPRDPGDSEE---LTRFPGLRGPTGQKVVRFGDEDLTWQDEHSAPFSWETKSQMEF 133
           P  PA      S +    T+ P ++     K    G + L  +   S+    E+ S  E 
Sbjct: 377 PSKPAGTTKNSSNKPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEESSSSEE- 435

Query: 134 SISALSIQEPSNGTAASEPRPLSKASQGSQALKSSQGSRSSSLDALGPTRKEEEASFWKI 193
                  ++     A ++P+  +KA+    A ++ QGSR SS D+   + +EEE    K 
Sbjct: 436 -------EKTKKMVATTKPKATAKAALSLPAKQAPQGSRDSSSDSDSSSSEEEEEKTSKS 488

Query: 194 NAERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKDREAKVERPSTLRQE 251
             ++     P+       PS+  S +KG+         + + ++ E K++   + R +
Sbjct: 489 AVKKK----PQKVAGGAAPSKPASAKKGKAESSNSSSSDDSSEEEEEKLKGKGSPRPQ 542


>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
          Length = 2017

 Score = 35.8 bits (81), Expect = 0.053
 Identities = 41/192 (21%), Positives = 81/192 (42%), Gaps = 5/192 (2%)

Query: 103 QKVVRFGDEDLTWQDEHSAPFSWETKSQMEFSISALSIQEPSNGTAASE----PRPLSKA 158
           Q+ +R   + L  + E +       + ++E S   L   E      A E       LS+A
Sbjct: 633 QEELRRQRDRLEEEQEDAVQDGARVRRELERSHRQLEQLEGKRSVLAKELVEVREALSRA 692

Query: 159 SQGSQALKSSQGSRSSSLDALGPTRKEEEASFWKINAERSRGEGPEAEFQSLTPSQIKSM 218
           +     L++ +   + +L      R E E S  K+ AE +  +   ++  +L  S  +  
Sbjct: 693 TLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNESLAQDK 752

Query: 219 EKGEKVLPPCYRQEPAPKDREAKVERPSTL-RQEQRPLPNVSTERERPQPVQAFSSALHE 277
               +++     ++ A + R+ + E+ +T+ R+EQ  L  +  E+E  +     S  + E
Sbjct: 753 LDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAE 812

Query: 278 AAPSQLEGKLPS 289
            A   LE +LP+
Sbjct: 813 QAQEALEQQLPT 824


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 35.8 bits (81), Expect = 0.053
 Identities = 43/167 (25%), Positives = 65/167 (38%), Gaps = 26/167 (15%)

Query: 148 AASEPRPLSKASQGS--------QALKSSQGSRSSSLDALGPTRKEEEASFWKINAERSR 199
           A   P+P S   + S        Q  K  +  R    ++  P R+ +++S  K    RS 
Sbjct: 164 APEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSS--KKKKHRSE 221

Query: 200 GEGPEAEFQSLTP-SQIKSMEKGEKVLPPCYRQEPAPKDREAKVERPSTLRQEQRPLPNV 258
            E  + + +S TP S+ KS +K  K         PAPK R A      +   +     + 
Sbjct: 222 SESKKRKHRSPTPKSKRKSKDKKRK---RSRSTTPAPKSRRAH----RSTSADSASSSDT 274

Query: 259 STERERPQPVQAFSSALHEAAPSQLEGKLPSPDVRQDDGEDTLFSEP 305
           S  R R    +  ++AL         G+ PSP   +    D  FSEP
Sbjct: 275 SRSRSRSAAAKTHTTAL--------AGRSPSPASGRRGEGDAPFSEP 313



 Score = 34.7 bits (78), Expect = 0.12
 Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 27/162 (16%)

Query: 140  IQEPSNGTAASEPRPL-----------SKASQGSQALKSSQGSRSSSLDALGPTRKEEEA 188
            + EP   T A +P  L           S +S  S +  SS  S SSS  + G +  + E 
Sbjct: 2506 VGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEG 2565

Query: 189  SFWKINAERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKDREAKVERPSTL 248
            S   +  E +    P     S TP+  +++ +G    PP    EP P    AK +R S+ 
Sbjct: 2566 SSLPVQPEVALKRVP-----SPTPAPKEAVREGR---PP----EPTP----AKRKRRSSS 2609

Query: 249  RQEQRPLPNVSTERERPQPVQAFSSALHEAAPSQLEGKLPSP 290
                    + S+         + SS+   ++ S      PSP
Sbjct: 2610 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSP 2651



 Score = 31.6 bits (70), Expect = 1.0
 Identities = 33/127 (25%), Positives = 48/127 (37%), Gaps = 21/127 (16%)

Query: 143  PSNGTAASEPRPLSKASQGSQALKSSQGSRSSSLDALGPTRKEEEASFWKINAERSRGEG 202
            P    A  + R  S +S  S +  SS  S SSS                  ++  S    
Sbjct: 2596 PEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSS----------------SSSSSSSSSSS 2639

Query: 203  PEAEFQSLTPSQIKSMEKGEKVLP-PCYRQEPAPKDREAKVER-PSTLRQEQRPLPNVST 260
              +   S +PS  K    G + LP P   ++P P +R ++  R P    ++ R L     
Sbjct: 2640 SSSSSSSSSPSPAK---PGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPV 2696

Query: 261  ERERPQP 267
            ER RP P
Sbjct: 2697 ERRRPSP 2703



 Score = 28.9 bits (63), Expect = 6.5
 Identities = 29/126 (23%), Positives = 50/126 (39%), Gaps = 14/126 (11%)

Query: 151  EPRPLSKASQGSQALKSSQGSRSSSLDALGPTRKEEEASFWKINAERSRGEGPEAEFQSL 210
            +PR L ++   S+  K+    R     +   T +  + S  +    R R  G  + + S 
Sbjct: 1766 KPRGLQRSRSRSRREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGG--SGYHSR 1823

Query: 211  TPSQIKSME------KGEKVLPPCYRQE------PAPKDREAKVERPSTLRQEQRPLPNV 258
            +P++ +S        +G    PP  R+       PAP  R      P+T R+ +   P +
Sbjct: 1824 SPARQESSRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLI 1883

Query: 259  STERER 264
            S  R R
Sbjct: 1884 SRRRSR 1889



 Score = 28.5 bits (62), Expect = 8.5
 Identities = 50/228 (21%), Positives = 75/228 (32%), Gaps = 29/228 (12%)

Query: 78  RAPAPRDPGDSEELTRFPGLRGPTGQKVVRFGDEDLTWQDEHSAP------FSWETKSQM 131
           + PAP  P     +      R PT ++  +   +D   + E S+P       S + K + 
Sbjct: 161 KQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRS 220

Query: 132 EFSISALSIQEPS------------NGTAASEPRPLSKA---SQGSQALKSSQGSRSSSL 176
           E        + P+              + ++ P P S+    S  + +  SS  SRS S 
Sbjct: 221 ESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSR 280

Query: 177 DALGPTRKEEEASFWKINAERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPK 236
            A   T     A      A   RGEG     +  T S  +          P    E   K
Sbjct: 281 SAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDK 340

Query: 237 DREAK-VERPSTLRQEQRPLPNVSTERERPQPVQAFSSALHEAAPSQL 283
           D++ K   RPS       P P  S+    P       +  H  +P  L
Sbjct: 341 DKKEKSATRPS-------PSPERSSTGPEPPAPTPLLAERHGGSPQPL 381



 Score = 28.5 bits (62), Expect = 8.5
 Identities = 46/223 (20%), Positives = 76/223 (34%), Gaps = 15/223 (6%)

Query: 78  RAPAPRDPGDSEELTRFPGLR---GPTGQKVVRFGDEDLTWQDEHSAPFSWETKSQMEFS 134
           R+P P+    S++  R         P  ++  R    D     + S   S    ++   +
Sbjct: 230 RSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTT 289

Query: 135 ISALSIQEPSNGTAASEPRPLSKASQGSQALKSSQGSR----SSSLDALGPTRKEEEASF 190
             A     P++G       P S+    S    SS  +     SS  +     +KE+ A+ 
Sbjct: 290 ALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDKDKDKKEKSATR 349

Query: 191 WKINAERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPC---YRQEPAPKDREAKVERPST 247
              + ERS   GPE       P+ + +   G    P       QEP     EA   R  +
Sbjct: 350 PSPSPERS-STGPEPP----APTPLLAERHGGSPQPLATTPLSQEPVNPPSEASPTRDRS 404

Query: 248 LRQEQRPLPNVSTERERPQPVQAFSSALHEAAPSQLEGKLPSP 290
             +    LP  S+    P   Q    + H ++  +     P+P
Sbjct: 405 PPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAP 447


>gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sapiens]
          Length = 2365

 Score = 35.4 bits (80), Expect = 0.070
 Identities = 40/161 (24%), Positives = 64/161 (39%), Gaps = 28/161 (17%)

Query: 58   WARLPPAQQDEIIDRCLVGPRAPAPRDPGDSEELTRFPGLR-GPTGQKVVRFGDEDLTWQ 116
            WAR+P    + +++  L+  R P     G  ++L R  G   GP G         D+  Q
Sbjct: 1574 WARVPSLDWEGLLE--LLQARLPRKDPAGHRDDLARALGPELGPPGTN-------DVPEQ 1624

Query: 117  DEHSAPFSWETKSQMEFSISALSIQEPSNGTAASEPRPLSKASQGSQALKSSQGSRSSSL 176
            + HS P  W   + +     AL  Q P        P P   ++Q  + +K ++G  +++L
Sbjct: 1625 ESHSQPEGWAEATPVNGHSPALQSQSP-----VQLPSPACTSTQWPK-IKVTRGPATATL 1678

Query: 177  DALGPTRKEEEASFWKINAERSRGEG---PEAEFQSLTPSQ 214
              L  T              RS  +G   PE +FQ   P +
Sbjct: 1679 AGLEQTGP---------LGSRSTAKGPSLPELQFQPEEPEE 1710



 Score = 28.9 bits (63), Expect = 6.5
 Identities = 35/139 (25%), Positives = 49/139 (35%), Gaps = 9/139 (6%)

Query: 154 PLSKASQGSQALKSSQGSRSSSLDALGPTRKEEEASFW---KINAERSRGEGPEAEFQSL 210
           P S  +    +      S SSS+D     R+EEEA  W    +   R   EGP A+    
Sbjct: 130 PGSDPTSSPDSATPDDTSNSSSVDWDTVERQEEEAPSWDELAVMIPRRPREGPRADSSQR 189

Query: 211 TPSQIKSMEKGEKVLPPCYRQEPAPKDREAKVERPSTLRQEQRPLPNVSTERERPQPVQA 270
            PS +     G        ++E       +  +  + LR E      +S ER R    QA
Sbjct: 190 APSLLTRSPVGGDAAG--QKKEDTGGGGRSAGQHWARLRGES----GLSLERHRSTLTQA 243

Query: 271 FSSALHEAAPSQLEGKLPS 289
            S   H    S      P+
Sbjct: 244 SSMTPHSGPRSTTSQASPA 262


>gi|12751497 hypothetical protein LOC65265 [Homo sapiens]
          Length = 229

 Score = 35.4 bits (80), Expect = 0.070
 Identities = 34/134 (25%), Positives = 52/134 (38%), Gaps = 20/134 (14%)

Query: 143 PSNGTAASEPRPLSKASQGS-------QALKSSQGSRSSSLDALGPTRKEEEASFWKINA 195
           P     A  P P+S A   S       Q   S+  SR+  L   G T  +++ +  K   
Sbjct: 20  PCASRGARLPGPVSSARNPSTVCLCPEQPTCSNADSRAHPLGDEGGTASKKQKNKKKTRN 79

Query: 196 ERSRGEGPEAEFQSLTPSQIKSMEKGE-----KVLPPCY--------RQEPAPKDREAKV 242
             S   G E   + L P ++    + +     + L  C         RQ+P PK +E  +
Sbjct: 80  RASVANGGEKASEKLAPEEVPLSAEAQAQQLAQELAWCVEQLELGLKRQKPTPKQKEQAI 139

Query: 243 ERPSTLRQEQRPLP 256
               TLR ++ PLP
Sbjct: 140 GAIRTLRSKRTPLP 153


>gi|21327710 nucleosome assembly protein 1-like 3 [Homo sapiens]
          Length = 506

 Score = 35.0 bits (79), Expect = 0.091
 Identities = 36/125 (28%), Positives = 52/125 (41%), Gaps = 14/125 (11%)

Query: 185 EEEASFWKINAERSRGEGPEAEFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKDREAKVER 244
           EEE  +   + E S  E    E Q  TPS++  +E GE+   P    E   +++E   E 
Sbjct: 159 EEECEWNSEDEEFSSDE----EVQDNTPSEMPPLE-GEEEENPKENPEVKAEEKEVPKEI 213

Query: 245 PSTLRQEQ---RPLPNVSTERERPQPVQAFSSALHEAAPSQLEGKLPSPDVRQDDGEDTL 301
           P    +E+   + +P V  E +      A S    EA P   E     P V+ DD E   
Sbjct: 214 PEVKDEEKEVPKEIPEVKAEEK------ADSKDCMEATPEVKEDPKEVPQVKADDKEQPK 267

Query: 302 FSEPK 306
            +E K
Sbjct: 268 ATEAK 272


>gi|116325993 c114 SLIT-like testicular protein [Homo sapiens]
          Length = 1700

 Score = 35.0 bits (79), Expect = 0.091
 Identities = 65/274 (23%), Positives = 103/274 (37%), Gaps = 43/274 (15%)

Query: 77  PRAPA-PRDPGDSEELTRFPGLRGPTGQKVVRFGDEDLTWQDEHSAPF--SWETKSQ--M 131
           P AP  P DP D + L       GP+    +    ++ T   E+  PF  +W++  +  +
Sbjct: 72  PHAPTLPADPWDFDHL-------GPSASSEMPAPPQEST---ENLVPFLDTWDSAGEQPL 121

Query: 132 EFSISALSIQEPSNGTAASEPRPLSKASQGSQALKSSQGSRSSSLDALGPTRKEEEASFW 191
           E      S Q+  +  +  E  P+S      + LK     R S  + +G TR+       
Sbjct: 122 EPEQFLASQQDLKDKLSPQERLPVSP-----KKLKKDPAQRWSLAEIIGITRQLSTPQSQ 176

Query: 192 KINAERSRGEGPEAEFQSLTPS-QIKSMEK---GEKVLPPCYRQEPAPKDREAKVERPST 247
           K   +            SL P  ++KS E     E+V P  +  EP  ++ E   +  S+
Sbjct: 177 KQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSS 236

Query: 248 LRQEQRPLPNVSTERERPQPVQAFSSAL-------------HEAA-----PSQLEGKLPS 289
             Q++ P        E P  +Q  + AL             HE +       Q    LP+
Sbjct: 237 SLQQEAPAQLPQLLEEEPSSMQQEAPALPPESSMESLTLPNHEVSVQPPGEDQAYYHLPN 296

Query: 290 PDVRQDDGEDTLFSEPKFAQVSSSNVVLKTGFDF 323
             V+  D E T+ SEP   +  SS    +T   F
Sbjct: 297 ITVKPADVEVTITSEPT-NETESSQAQQETPIQF 329


>gi|110665701 leucine rich repeat containing 37A [Homo sapiens]
          Length = 1700

 Score = 35.0 bits (79), Expect = 0.091
 Identities = 65/274 (23%), Positives = 103/274 (37%), Gaps = 43/274 (15%)

Query: 77  PRAPA-PRDPGDSEELTRFPGLRGPTGQKVVRFGDEDLTWQDEHSAPF--SWETKSQ--M 131
           P AP  P DP D + L       GP+    +    ++ T   E+  PF  +W++  +  +
Sbjct: 72  PHAPTLPADPWDFDHL-------GPSASSEMPAPPQEST---ENLVPFLDTWDSAGEQPL 121

Query: 132 EFSISALSIQEPSNGTAASEPRPLSKASQGSQALKSSQGSRSSSLDALGPTRKEEEASFW 191
           E      S Q+  +  +  E  P+S      + LK     R S  + +G TR+       
Sbjct: 122 EPEQFLASQQDLKDKLSPQERLPVSP-----KKLKKDPAQRWSLAEIIGITRQLSTPQSQ 176

Query: 192 KINAERSRGEGPEAEFQSLTPS-QIKSMEK---GEKVLPPCYRQEPAPKDREAKVERPST 247
           K   +            SL P  ++KS E     E+V P  +  EP  ++ E   +  S+
Sbjct: 177 KQTLQNEYSSTDTPYPGSLPPELRVKSDEPPGPSEQVGPSQFHLEPETQNPETLEDIQSS 236

Query: 248 LRQEQRPLPNVSTERERPQPVQAFSSAL-------------HEAA-----PSQLEGKLPS 289
             Q++ P        E P  +Q  + AL             HE +       Q    LP+
Sbjct: 237 SLQQEAPAQLPQLLEEEPSSMQQEAPALPPESSMESLTLPNHEVSVQPPGEDQAYYHLPN 296

Query: 290 PDVRQDDGEDTLFSEPKFAQVSSSNVVLKTGFDF 323
             V+  D E T+ SEP   +  SS    +T   F
Sbjct: 297 ITVKPADVEVTITSEPT-NETESSQAQQETPIQF 329


>gi|58331253 obscurin, cytoskeletal calmodulin and titin-interacting
            RhoGEF isoform a [Homo sapiens]
          Length = 6620

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 14/133 (10%)

Query: 155  LSKASQGSQALKSSQGSRSSSLDALGPTRKEEEASFWKINAERSRGEGPEAEFQSLTPSQ 214
            +S   QG+    S+QG  ++S   LG  RKEE  +  +     S  E    EF     SQ
Sbjct: 5483 ISTFLQGTTQAISAQGLETASFADLGGQRKEEPLAAKEALGHLSLAEVGTEEFLQKLTSQ 5542

Query: 215  IKSMEKGEKVLPPCYRQEPAPKDREAKVERPSTLRQEQRPLPNVSTERERPQPVQAFSSA 274
            I  M               + K  +AK++ P     E    P+ S    R +P  +   +
Sbjct: 5543 ITEM--------------VSAKITQAKLQVPGGDSDEDSKTPSASPRHGRSRPSSSIQES 5588

Query: 275  LHEAAPSQLEGKL 287
              E+      G++
Sbjct: 5589 SSESEDGDARGEI 5601


>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
            RhoGEF isoform b [Homo sapiens]
          Length = 7968

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 14/133 (10%)

Query: 155  LSKASQGSQALKSSQGSRSSSLDALGPTRKEEEASFWKINAERSRGEGPEAEFQSLTPSQ 214
            +S   QG+    S+QG  ++S   LG  RKEE  +  +     S  E    EF     SQ
Sbjct: 5483 ISTFLQGTTQAISAQGLETASFADLGGQRKEEPLAAKEALGHLSLAEVGTEEFLQKLTSQ 5542

Query: 215  IKSMEKGEKVLPPCYRQEPAPKDREAKVERPSTLRQEQRPLPNVSTERERPQPVQAFSSA 274
            I  M               + K  +AK++ P     E    P+ S    R +P  +   +
Sbjct: 5543 ITEM--------------VSAKITQAKLQVPGGDSDEDSKTPSASPRHGRSRPSSSIQES 5588

Query: 275  LHEAAPSQLEGKL 287
              E+      G++
Sbjct: 5589 SSESEDGDARGEI 5601


>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
          Length = 4374

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 57/251 (22%), Positives = 96/251 (38%), Gaps = 33/251 (13%)

Query: 77   PRAPAPRDPGD-SEELTRFPGLRGPTGQKVVRFGDEDLTWQDEHSAPFSWETKSQMEFS- 134
            P  P P   G+  +EL    G  G + Q ++    E+L      + P      +QME S 
Sbjct: 2772 PTLPTPPALGEVPQELQSPAGEGGSSTQLLMPVEPEELG----PTRPSGEAETTQMELSP 2827

Query: 135  ---ISALSIQEPSNGTAAS------EPRPLSKASQGSQALKSSQGSRSSSLDALGPTRKE 185
               I++LS +   +  A +      E  P+  +S  S  L+ + G  S    A G + + 
Sbjct: 2828 APTITSLSPERAEDSDALTAVSSQLEGSPMDTSSLASCTLEEAVGDTS----AAGSSEQP 2883

Query: 186  EEASFWKINAERSRGEGPEA--EFQSLTPSQIKSMEKGEKVLPPCYRQEPAPKDREAKVE 243
               S        + G+ P A  E Q  +    +S +  E   PP   +  + +D    + 
Sbjct: 2884 RAGS-------STPGDAPPAVAEVQGRSDGSGESAQPPEDSSPPASSESSSTRDSAVAIS 2936

Query: 244  RPSTLRQEQRPLPNVSTERERPQPVQAFSSALHEAAPSQLEGKLPSPDVRQDDGEDTLFS 303
               +    + PLP+ S+E E P        +L E         LP  D+R++  ++ L  
Sbjct: 2937 GADSRGILEEPLPSTSSEEEDP----LAGISLPEGVDPSFLAALPD-DIRREVLQNQLGI 2991

Query: 304  EPKFAQVSSSN 314
             P      S+N
Sbjct: 2992 RPPTRTAPSTN 3002


>gi|217330641 IWS1 homolog [Homo sapiens]
          Length = 819

 Score = 34.7 bits (78), Expect = 0.12
 Identities = 54/239 (22%), Positives = 95/239 (39%), Gaps = 28/239 (11%)

Query: 87  DSEELTRFPGLRGPTGQKVVRFGDEDLTWQDEHSAPFSWETKSQMEFSISALSIQE---- 142
           +SEE  + PG      ++++     D   +D    P S     +++ S ++ S  E    
Sbjct: 121 ESEETRKLPG-SDSENEELLNGHASDSENEDVGKHPASDSEIEELQKSPASDSETEDALK 179

Query: 143 PSNGTAASEPRPLSKASQG-SQALKSSQGSRSSSLDALGPTRKEEEASFWKINAERSRGE 201
           P    + SE  P  +AS   ++     + S S S +   P   + E+       E  R +
Sbjct: 180 PQISDSESEEPPRHQASDSENEEPPKPRMSDSESEELPKPQVSDSESE------EPPRHQ 233

Query: 202 GPEAEFQSLTPSQIKSMEKGEKVLPPCYRQE-------PAPKDREAKVERP-----STLR 249
             ++E + L   +I   E  +   PP ++         P P+  +++ E P     S   
Sbjct: 234 ASDSENEELPKPRISDSESED---PPRHQASDSENEELPKPRISDSESEDPPRNQASDSE 290

Query: 250 QEQRPLPNVS-TERERPQPVQAFSSALHEAAPSQLEGKLPSPDVRQDDGEDTLFSEPKF 307
            E+ P P VS +E E PQ   A  S   +A+  + + +      R++ GEDT      F
Sbjct: 291 NEELPKPRVSDSESEGPQKGPASDSETEDASRHKQKPESDDDSDRENKGEDTEMQNDSF 349


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.127    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,361,975
Number of Sequences: 37866
Number of extensions: 787499
Number of successful extensions: 3098
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 164
Number of HSP's that attempted gapping in prelim test: 2916
Number of HSP's gapped (non-prelim): 357
length of query: 327
length of database: 18,247,518
effective HSP length: 103
effective length of query: 224
effective length of database: 14,347,320
effective search space: 3213799680
effective search space used: 3213799680
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.