Guide to the Human Genome
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Search of human proteins with 14211933

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|14211933 spermatogenesis associated 22 [Homo sapiens]
         (363 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|14211933 spermatogenesis associated 22 [Homo sapiens]              740   0.0  
gi|161169017 neuron navigator 2 isoform 4 [Homo sapiens]               37   0.021
gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens]               37   0.021
gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens]                37   0.021
gi|54112420 Cas-Br-M (murine) ecotropic retroviral transforming ...    34   0.23 
gi|189217904 RPGRIP1-like isoform b [Homo sapiens]                     33   0.31 
gi|118442834 RPGRIP1-like isoform a [Homo sapiens]                     33   0.31 
gi|239757046 PREDICTED: similar to hCG1790759 [Homo sapiens]           32   0.89 
gi|239751558 PREDICTED: similar to hCG1790759 [Homo sapiens]           32   0.89 
gi|169212818 PREDICTED: similar to hCG1790759 [Homo sapiens]           32   0.89 
gi|38788333 remodeling and spacing factor 1 [Homo sapiens]             31   2.0  
gi|4507877 vinculin isoform VCL [Homo sapiens]                         30   3.4  
gi|7669550 vinculin isoform meta-VCL [Homo sapiens]                    30   3.4  
gi|32261332 seizure related 6 homolog (mouse)-like precursor [Ho...    30   3.4  
gi|145580592 nesprin-3 [Homo sapiens]                                  30   3.4  
gi|136255216 proline-rich transmembrane protein 3 [Homo sapiens]       30   3.4  
gi|108860697 zinc finger protein 592 [Homo sapiens]                    30   3.4  
gi|221139728 pleckstrin homology domain containing, family M (wi...    30   4.4  
gi|4557365 Bloom syndrome protein [Homo sapiens]                       29   5.8  
gi|149944496 UBX domain containing 7 [Homo sapiens]                    29   5.8  
gi|153792190 neurogenic differentiation 4 [Homo sapiens]               29   7.5  
gi|4758646 kinesin family member 3B [Homo sapiens]                     28   9.8  
gi|57863310 stromal antigen 3 [Homo sapiens]                           28   9.8  

>gi|14211933 spermatogenesis associated 22 [Homo sapiens]
          Length = 363

 Score =  740 bits (1910), Expect = 0.0
 Identities = 363/363 (100%), Positives = 363/363 (100%)

Query: 1   MKRSLSENSARSTAGCLPVPLFNQKKRNRQPLTSNPLKDDSGISTPSDNYDFPPLPTDWA 60
           MKRSLSENSARSTAGCLPVPLFNQKKRNRQPLTSNPLKDDSGISTPSDNYDFPPLPTDWA
Sbjct: 1   MKRSLSENSARSTAGCLPVPLFNQKKRNRQPLTSNPLKDDSGISTPSDNYDFPPLPTDWA 60

Query: 61  WEAVNPELAPVMKTVDTGQIPHSASRPLRSQDSVFNSIQSNTGRSQGGWSYRDGNKNTSL 120
           WEAVNPELAPVMKTVDTGQIPHSASRPLRSQDSVFNSIQSNTGRSQGGWSYRDGNKNTSL
Sbjct: 61  WEAVNPELAPVMKTVDTGQIPHSASRPLRSQDSVFNSIQSNTGRSQGGWSYRDGNKNTSL 120

Query: 121 KTWNKNDFKPQCKRTNLVANDGKNSCPVSSGAQQQKQLRIPEPPNLSRNKETELLRQTHS 180
           KTWNKNDFKPQCKRTNLVANDGKNSCPVSSGAQQQKQLRIPEPPNLSRNKETELLRQTHS
Sbjct: 121 KTWNKNDFKPQCKRTNLVANDGKNSCPVSSGAQQQKQLRIPEPPNLSRNKETELLRQTHS 180

Query: 181 SKISGCTMRGLDKNSALQTLKPNFQQNQYKKQMLDDIPEDNTLKETSLYQLQFKEKASSL 240
           SKISGCTMRGLDKNSALQTLKPNFQQNQYKKQMLDDIPEDNTLKETSLYQLQFKEKASSL
Sbjct: 181 SKISGCTMRGLDKNSALQTLKPNFQQNQYKKQMLDDIPEDNTLKETSLYQLQFKEKASSL 240

Query: 241 RIISAVIESMKYWREHAQKTVLLFEVLAVLDSAVTPGPYYSKTFLMRDGKNTLPCVFYEI 300
           RIISAVIESMKYWREHAQKTVLLFEVLAVLDSAVTPGPYYSKTFLMRDGKNTLPCVFYEI
Sbjct: 241 RIISAVIESMKYWREHAQKTVLLFEVLAVLDSAVTPGPYYSKTFLMRDGKNTLPCVFYEI 300

Query: 301 DRELPRLIRGRVHRCVGNYDQKKNIFQCVSVRPASVSEQKTFQAFVKIADVEMQYYINVM 360
           DRELPRLIRGRVHRCVGNYDQKKNIFQCVSVRPASVSEQKTFQAFVKIADVEMQYYINVM
Sbjct: 301 DRELPRLIRGRVHRCVGNYDQKKNIFQCVSVRPASVSEQKTFQAFVKIADVEMQYYINVM 360

Query: 361 NET 363
           NET
Sbjct: 361 NET 363


>gi|161169017 neuron navigator 2 isoform 4 [Homo sapiens]
          Length = 1493

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 56/202 (27%), Positives = 74/202 (36%), Gaps = 29/202 (14%)

Query: 2   KRSLSENSARSTAGCLPVPLFNQKKRNR----QPLTSNPLKDDSGISTPSDNYDFPPLPT 57
           +  +S  + + TA    V  F Q   N     Q LT    + DS ++      +      
Sbjct: 712 QEKVSALTTQLTANAHLVAAFEQSLGNMTIRLQSLTMTAEQKDSELNELRKTIELLKKQN 771

Query: 58  DWAWEAVN-----PELAPVMKTVDTGQIPHSASRPLRSQDSVFNSIQSNTGRSQGGWSYR 112
             A  A+N     PEL    K   T Q      R   S DSV +SI S T  S  G +  
Sbjct: 772 AAAQAAINGVINTPELN--CKGNGTAQSADLRIRRQHSSDSV-SSINSATSHSSVGSNIE 828

Query: 113 DGNKNTSLKTWNKNDFKPQCKRTNLVANDGKNSCPVS----SGAQQQKQLRIPEPPNLSR 168
             +K    K W ++ FK            GK   P S    S  ++     +P  P L  
Sbjct: 829 SDSKKKKRKNWLRSSFKQAF---------GKKKSPKSASSHSDIEEMTDSSLPSSPKLPH 879

Query: 169 N---KETELLRQTHS-SKISGC 186
           N     T LLR +HS S IS C
Sbjct: 880 NGSTGSTPLLRNSHSNSLISEC 901


>gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens]
          Length = 2365

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 56/202 (27%), Positives = 74/202 (36%), Gaps = 29/202 (14%)

Query: 2    KRSLSENSARSTAGCLPVPLFNQKKRNR----QPLTSNPLKDDSGISTPSDNYDFPPLPT 57
            +  +S  + + TA    V  F Q   N     Q LT    + DS ++      +      
Sbjct: 1584 QEKVSALTTQLTANAHLVAAFEQSLGNMTIRLQSLTMTAEQKDSELNELRKTIELLKKQN 1643

Query: 58   DWAWEAVN-----PELAPVMKTVDTGQIPHSASRPLRSQDSVFNSIQSNTGRSQGGWSYR 112
              A  A+N     PEL    K   T Q      R   S DSV +SI S T  S  G +  
Sbjct: 1644 AAAQAAINGVINTPELN--CKGNGTAQSADLRIRRQHSSDSV-SSINSATSHSSVGSNIE 1700

Query: 113  DGNKNTSLKTWNKNDFKPQCKRTNLVANDGKNSCPVS----SGAQQQKQLRIPEPPNLSR 168
              +K    K W ++ FK            GK   P S    S  ++     +P  P L  
Sbjct: 1701 SDSKKKKRKNWLRSSFKQAF---------GKKKSPKSASSHSDIEEMTDSSLPSSPKLPH 1751

Query: 169  N---KETELLRQTHS-SKISGC 186
            N     T LLR +HS S IS C
Sbjct: 1752 NGSTGSTPLLRNSHSNSLISEC 1773


>gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens]
          Length = 2429

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 56/202 (27%), Positives = 74/202 (36%), Gaps = 29/202 (14%)

Query: 2    KRSLSENSARSTAGCLPVPLFNQKKRNR----QPLTSNPLKDDSGISTPSDNYDFPPLPT 57
            +  +S  + + TA    V  F Q   N     Q LT    + DS ++      +      
Sbjct: 1648 QEKVSALTTQLTANAHLVAAFEQSLGNMTIRLQSLTMTAEQKDSELNELRKTIELLKKQN 1707

Query: 58   DWAWEAVN-----PELAPVMKTVDTGQIPHSASRPLRSQDSVFNSIQSNTGRSQGGWSYR 112
              A  A+N     PEL    K   T Q      R   S DSV +SI S T  S  G +  
Sbjct: 1708 AAAQAAINGVINTPELN--CKGNGTAQSADLRIRRQHSSDSV-SSINSATSHSSVGSNIE 1764

Query: 113  DGNKNTSLKTWNKNDFKPQCKRTNLVANDGKNSCPVS----SGAQQQKQLRIPEPPNLSR 168
              +K    K W ++ FK            GK   P S    S  ++     +P  P L  
Sbjct: 1765 SDSKKKKRKNWLRSSFKQAF---------GKKKSPKSASSHSDIEEMTDSSLPSSPKLPH 1815

Query: 169  N---KETELLRQTHS-SKISGC 186
            N     T LLR +HS S IS C
Sbjct: 1816 NGSTGSTPLLRNSHSNSLISEC 1837


>gi|54112420 Cas-Br-M (murine) ecotropic retroviral transforming
           sequence b [Homo sapiens]
          Length = 982

 Score = 33.9 bits (76), Expect = 0.23
 Identities = 31/82 (37%), Positives = 38/82 (46%), Gaps = 13/82 (15%)

Query: 18  PVPLFNQKKRNRQPLTSNPLKDDSGISTPSDNYDF--PPLPTDWAWEAVNPELAPV---- 71
           PVPL       R P   NP    S   TPSD YD   PPL  D A++A+ P L P     
Sbjct: 775 PVPL----PPARPPTRDNPKHGSSLNRTPSD-YDLLIPPLGED-AFDALPPSLPPPPPPA 828

Query: 72  -MKTVDTGQIPHSASRPLRSQD 92
               ++  + P S+SRP   QD
Sbjct: 829 RHSLIEHSKPPGSSSRPSSGQD 850


>gi|189217904 RPGRIP1-like isoform b [Homo sapiens]
          Length = 1235

 Score = 33.5 bits (75), Expect = 0.31
 Identities = 39/177 (22%), Positives = 75/177 (42%), Gaps = 27/177 (15%)

Query: 83  SASRPLRSQ---DSVFNSIQS--NTGRSQGGWSYRDGNKNTSLKTWNKNDFKPQ------ 131
           SA + L++Q    + +N++QS  NTGR       R  N+N  L+   +   K Q      
Sbjct: 135 SAKQQLQTQGYRQTPYNNVQSRINTGR-------RKANENAGLQECPRKGIKFQDADVAE 187

Query: 132 ------CKRTNLVANDGKNSCPVSSGAQQQKQLRIPEPPNLSRNKETELLRQTHSSKISG 185
                  K  N +  + +          Q ++ +I E  +L+   +T+L R+ +  ++S 
Sbjct: 188 TPHPMFTKYGNSLLEEARGEIRNLENVIQSQRGQIEELEHLAEILKTQLRRKENEIELSL 247

Query: 186 CTMRGLDKNSALQTLKPNFQQNQYKKQMLDDIPEDNTLKETSLYQLQFKEKASSLRI 242
             +R          ++ N +  +  KQ+++   + N L       +Q +EK  +LRI
Sbjct: 248 LQLREQQATDQRSNIRDNVEMIKLHKQLVE---KSNALSAMEGKFIQLQEKQRTLRI 301


>gi|118442834 RPGRIP1-like isoform a [Homo sapiens]
          Length = 1315

 Score = 33.5 bits (75), Expect = 0.31
 Identities = 39/177 (22%), Positives = 75/177 (42%), Gaps = 27/177 (15%)

Query: 83  SASRPLRSQ---DSVFNSIQS--NTGRSQGGWSYRDGNKNTSLKTWNKNDFKPQ------ 131
           SA + L++Q    + +N++QS  NTGR       R  N+N  L+   +   K Q      
Sbjct: 135 SAKQQLQTQGYRQTPYNNVQSRINTGR-------RKANENAGLQECPRKGIKFQDADVAE 187

Query: 132 ------CKRTNLVANDGKNSCPVSSGAQQQKQLRIPEPPNLSRNKETELLRQTHSSKISG 185
                  K  N +  + +          Q ++ +I E  +L+   +T+L R+ +  ++S 
Sbjct: 188 TPHPMFTKYGNSLLEEARGEIRNLENVIQSQRGQIEELEHLAEILKTQLRRKENEIELSL 247

Query: 186 CTMRGLDKNSALQTLKPNFQQNQYKKQMLDDIPEDNTLKETSLYQLQFKEKASSLRI 242
             +R          ++ N +  +  KQ+++   + N L       +Q +EK  +LRI
Sbjct: 248 LQLREQQATDQRSNIRDNVEMIKLHKQLVE---KSNALSAMEGKFIQLQEKQRTLRI 301


>gi|239757046 PREDICTED: similar to hCG1790759 [Homo sapiens]
          Length = 737

 Score = 32.0 bits (71), Expect = 0.89
 Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 16/141 (11%)

Query: 41  SGISTPSDNYDFPPLPTDWAWE---AVNPELAPVMKTVD-----TGQIPHSASRPLRSQD 92
           SG+ TPS     PP P   AW+   +V P  AP+ + V        ++  + +R L S+ 
Sbjct: 152 SGLLTPSAARPDPPAPPAQAWDRRGSVTPTGAPIWELVSRVHGYQKEVVFTRNRDLLSKL 211

Query: 93  SVFNSIQSNTGRSQGGWSYRDGNKNTSLKTWNKNDFKPQCKRTNLVANDGKNSCPVSSGA 152
            V        G+ + G   ++G +   +K  +      Q   T L A D +    V SG 
Sbjct: 212 GV---CALEEGKDELGLQLKEGQEKEEMKCHDIRPRPSQRTLTRLPARDCQPCLWVPSGG 268

Query: 153 QQQKQLRIPEPPNLSRNKETE 173
                L   EP  L R    E
Sbjct: 269 -----LSAGEPRRLLRQSVRE 284


>gi|239751558 PREDICTED: similar to hCG1790759 [Homo sapiens]
          Length = 771

 Score = 32.0 bits (71), Expect = 0.89
 Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 16/141 (11%)

Query: 41  SGISTPSDNYDFPPLPTDWAWE---AVNPELAPVMKTVD-----TGQIPHSASRPLRSQD 92
           SG+ TPS     PP P   AW+   +V P  AP+ + V        ++  + +R L S+ 
Sbjct: 186 SGLLTPSAARPDPPAPPAQAWDRRGSVTPTGAPIWELVSRVHGYQKEVVFTRNRDLLSKL 245

Query: 93  SVFNSIQSNTGRSQGGWSYRDGNKNTSLKTWNKNDFKPQCKRTNLVANDGKNSCPVSSGA 152
            V        G+ + G   ++G +   +K  +      Q   T L A D +    V SG 
Sbjct: 246 GV---CALEEGKDELGLQLKEGQEKEEMKCHDIRPRPSQRTLTRLPARDCQPCLWVPSGG 302

Query: 153 QQQKQLRIPEPPNLSRNKETE 173
                L   EP  L R    E
Sbjct: 303 -----LSAGEPRRLLRQSVRE 318


>gi|169212818 PREDICTED: similar to hCG1790759 [Homo sapiens]
          Length = 771

 Score = 32.0 bits (71), Expect = 0.89
 Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 16/141 (11%)

Query: 41  SGISTPSDNYDFPPLPTDWAWE---AVNPELAPVMKTVD-----TGQIPHSASRPLRSQD 92
           SG+ TPS     PP P   AW+   +V P  AP+ + V        ++  + +R L S+ 
Sbjct: 186 SGLLTPSAARPDPPAPPAQAWDRRGSVTPTGAPIWELVSRVHGYQKEVVFTRNRDLLSKL 245

Query: 93  SVFNSIQSNTGRSQGGWSYRDGNKNTSLKTWNKNDFKPQCKRTNLVANDGKNSCPVSSGA 152
            V        G+ + G   ++G +   +K  +      Q   T L A D +    V SG 
Sbjct: 246 GV---CALEEGKDELGLQLKEGQEKEEMKCHDIRPRPSQRTLTRLPARDCQPCLWVPSGG 302

Query: 153 QQQKQLRIPEPPNLSRNKETE 173
                L   EP  L R    E
Sbjct: 303 -----LSAGEPRRLLRQSVRE 318


>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
          Length = 1441

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 5/67 (7%)

Query: 133 KRTNLVANDGKNSCPVSSGAQQQKQLRIPEPPNLSRNKET-----ELLRQTHSSKISGCT 187
           K T  +  D  +S  V     Q+ Q+  P+PP +  + ++     +L  +T  S    CT
Sbjct: 504 KETAPLRKDADSSISVLEIHSQKAQIEEPDPPEMETSLDSSEMAKDLSSKTALSSTESCT 563

Query: 188 MRGLDKN 194
           M+G +K+
Sbjct: 564 MKGEEKS 570


>gi|4507877 vinculin isoform VCL [Homo sapiens]
          Length = 1066

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 15/45 (33%), Positives = 20/45 (44%)

Query: 51  DFPPLPTDWAWEAVNPELAPVMKTVDTGQIPHSASRPLRSQDSVF 95
           DFPP P D     +  ELAP    +  G++P     P   +D  F
Sbjct: 841 DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEF 885


>gi|7669550 vinculin isoform meta-VCL [Homo sapiens]
          Length = 1134

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 15/45 (33%), Positives = 20/45 (44%)

Query: 51  DFPPLPTDWAWEAVNPELAPVMKTVDTGQIPHSASRPLRSQDSVF 95
           DFPP P D     +  ELAP    +  G++P     P   +D  F
Sbjct: 841 DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEF 885


>gi|32261332 seizure related 6 homolog (mouse)-like precursor [Homo
           sapiens]
          Length = 1024

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 7/90 (7%)

Query: 19  VPLFNQKKRNRQPLTSNPLKDDSGISTPSDNYDFPPLP------TDWAWEAVNPELAPVM 72
           VPL+  +K +  P T  PL+     S P   +  P  P       D A EA   + +P M
Sbjct: 182 VPLWLDRKESAVPTTPAPLQISPFTSQPYVAHTLPQRPEPGEPGPDMAQEAPQEDTSP-M 240

Query: 73  KTVDTGQIPHSASRPLRSQDSVFNSIQSNT 102
             +D G+   + S    SQ++  ++I + T
Sbjct: 241 ALMDKGENELTGSASEESQETTTSTIITTT 270


>gi|145580592 nesprin-3 [Homo sapiens]
          Length = 975

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 3/75 (4%)

Query: 157 QLRIPEPPNLSRNKETELLRQTHSSKISGCTMRGLDKNSALQTLKPNFQQNQYKKQMLDD 216
           Q+R+     L R+      +Q   S++ G    GLD  + ++  +P  Q+N   +  +D 
Sbjct: 568 QVRVQAEKGLQRDLPG---KQAQLSRLQGLQEEGLDLGAQMEAARPLVQENPNHQHKMDQ 624

Query: 217 IPEDNTLKETSLYQL 231
           +  D    + SL  L
Sbjct: 625 LSSDFQALQRSLEDL 639


>gi|136255216 proline-rich transmembrane protein 3 [Homo sapiens]
          Length = 981

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 4/61 (6%)

Query: 158 LRIPEPPNLSRNKETELLRQ--THSSKISGCTMRGLDKNSALQTLKPNFQQNQYKKQMLD 215
           LR P P NLSR+ +  L R+     S    C +RGL        L+P  ++  + K  LD
Sbjct: 804 LRPPSPINLSRSIDAALFREHLVRDSVFQRCGLRGLASPPPGGALRP--RRGSHPKAELD 861

Query: 216 D 216
           D
Sbjct: 862 D 862


>gi|108860697 zinc finger protein 592 [Homo sapiens]
          Length = 1267

 Score = 30.0 bits (66), Expect = 3.4
 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 8/59 (13%)

Query: 5   LSENSARSTAGCL------PVPLFNQKKRNRQPLTSNPLKDDSGISTP--SDNYDFPPL 55
           ++ +SARS  G L      P+P FNQ      P   +P+KD+     P  SD+Y  PPL
Sbjct: 115 MNGDSARSFPGKLEPPKSEPLPTFNQFSPISSPEPEDPIKDNGFGIKPKHSDSYFPPPL 173


>gi|221139728 pleckstrin homology domain containing, family M (with
           RUN domain) member 2 [Homo sapiens]
          Length = 1019

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 50/190 (26%)

Query: 32  LTSNPLK-DDSGISTPSDNYD----FPPLP----TDWAWEAVNPELAPVMKTVDTGQIPH 82
           +TS  L+ DDS I+  S++YD    FP +P    TDW                + G +  
Sbjct: 200 VTSTNLEWDDSAIAPSSEDYDFGDVFPAVPSVPSTDW----------------EDGDLTD 243

Query: 83  SASRPLRSQDSVFNSIQSNTGRSQGGWSYRDGNKNTSLKTWNKNDFKPQCKRTNLVANDG 142
           + S P RS  S   S +++T RS                T  +N F  +   T       
Sbjct: 244 TVSGP-RSTASDLTSSKAST-RS---------------PTQRQNPFNEEPAET----VSS 282

Query: 143 KNSCPVSSGAQQQKQLRIPEPPNLSRNKETELLRQTHSSKISGCTMRGLDKNSALQTLKP 202
            ++ PV + +Q++++ +  +PP+     E E++R T   KI        D+ ++   L P
Sbjct: 283 SDTTPVHTTSQEKEEAQALDPPDAC--TELEVIRVTKKKKIGKKKKSRSDEEAS--PLHP 338

Query: 203 NFQQNQYKKQ 212
              Q +  KQ
Sbjct: 339 ACSQKKCAKQ 348


>gi|4557365 Bloom syndrome protein [Homo sapiens]
          Length = 1417

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 1/77 (1%)

Query: 25  KKRNRQPLTSNPLKDDSGISTPSDNYDFPPLPTDWAWEAVNPELAPVMKTVDTGQIPHSA 84
           K +N+   + N L+ ++  S   DN+D      D  WE +   LA   K+      P   
Sbjct: 531 KDQNKHTASINDLERETQPSYDIDNFDIDDFDDDDDWEDIMHNLA-ASKSSTAAYQPIKE 589

Query: 85  SRPLRSQDSVFNSIQSN 101
            RP++S     +S +++
Sbjct: 590 GRPIKSVSERLSSAKTD 606


>gi|149944496 UBX domain containing 7 [Homo sapiens]
          Length = 489

 Score = 29.3 bits (64), Expect = 5.8
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 8/53 (15%)

Query: 21  LFNQKKRNRQPLTSNPLKDDSGIST--------PSDNYDFPPLPTDWAWEAVN 65
           L ++K+ NR+PLT  P++ D G +T         S+  + PP   D   E ++
Sbjct: 355 LGHRKEENRRPLTEPPVRTDPGTATNHQGLPAVDSEILEMPPEKADGVVEGID 407


>gi|153792190 neurogenic differentiation 4 [Homo sapiens]
          Length = 331

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 9/58 (15%)

Query: 3   RSLSENSARSTAGCL---PVPLFNQKKRNRQPLTSNPLKDDSGISTPSDNYDFPPLPT 57
           + LS+ ++   AGCL   P  +  +K  ++ P+       DS IS  + NY  P LP+
Sbjct: 160 KGLSQPTSNLVAGCLQLGPQSVLLEKHEDKSPIC------DSAISVHNFNYQSPGLPS 211


>gi|4758646 kinesin family member 3B [Homo sapiens]
          Length = 747

 Score = 28.5 bits (62), Expect = 9.8
 Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 12/100 (12%)

Query: 152 AQQQKQLRIPEPPNLSRNKETELLRQTHSSKISGCTMRGLDKNSALQT--LKPNFQQNQY 209
           A+Q+++ R  +    SR++ET  L++T+SS         L +   ++T  LK  F + Q 
Sbjct: 500 AEQKRREREIQQQMESRDEETLELKETYSS---------LQQEVDIKTKKLKKLFSKLQA 550

Query: 210 KKQMLDDIPEDNTLKETSLYQLQFKEKASSLRIISAVIES 249
            K  + D+ E++  +   L Q Q  E    L++   +IE+
Sbjct: 551 VKAEIHDLQEEHIKERQELEQTQ-NELTRELKLKHLIIEN 589


>gi|57863310 stromal antigen 3 [Homo sapiens]
          Length = 1225

 Score = 28.5 bits (62), Expect = 9.8
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 61  WEAVNPELAPVMKTVDTGQIPHSASRP 87
           WE   P    + K VDTG++PH    P
Sbjct: 718 WELYEPCCQLLQKAVDTGEVPHQVILP 744


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.129    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,231,646
Number of Sequences: 37866
Number of extensions: 660515
Number of successful extensions: 1453
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1447
Number of HSP's gapped (non-prelim): 24
length of query: 363
length of database: 18,247,518
effective HSP length: 104
effective length of query: 259
effective length of database: 14,309,454
effective search space: 3706148586
effective search space used: 3706148586
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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