BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|14211933 spermatogenesis associated 22 [Homo sapiens] (363 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|14211933 spermatogenesis associated 22 [Homo sapiens] 740 0.0 gi|161169017 neuron navigator 2 isoform 4 [Homo sapiens] 37 0.021 gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens] 37 0.021 gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens] 37 0.021 gi|54112420 Cas-Br-M (murine) ecotropic retroviral transforming ... 34 0.23 gi|189217904 RPGRIP1-like isoform b [Homo sapiens] 33 0.31 gi|118442834 RPGRIP1-like isoform a [Homo sapiens] 33 0.31 gi|239757046 PREDICTED: similar to hCG1790759 [Homo sapiens] 32 0.89 gi|239751558 PREDICTED: similar to hCG1790759 [Homo sapiens] 32 0.89 gi|169212818 PREDICTED: similar to hCG1790759 [Homo sapiens] 32 0.89 gi|38788333 remodeling and spacing factor 1 [Homo sapiens] 31 2.0 gi|4507877 vinculin isoform VCL [Homo sapiens] 30 3.4 gi|7669550 vinculin isoform meta-VCL [Homo sapiens] 30 3.4 gi|32261332 seizure related 6 homolog (mouse)-like precursor [Ho... 30 3.4 gi|145580592 nesprin-3 [Homo sapiens] 30 3.4 gi|136255216 proline-rich transmembrane protein 3 [Homo sapiens] 30 3.4 gi|108860697 zinc finger protein 592 [Homo sapiens] 30 3.4 gi|221139728 pleckstrin homology domain containing, family M (wi... 30 4.4 gi|4557365 Bloom syndrome protein [Homo sapiens] 29 5.8 gi|149944496 UBX domain containing 7 [Homo sapiens] 29 5.8 gi|153792190 neurogenic differentiation 4 [Homo sapiens] 29 7.5 gi|4758646 kinesin family member 3B [Homo sapiens] 28 9.8 gi|57863310 stromal antigen 3 [Homo sapiens] 28 9.8 >gi|14211933 spermatogenesis associated 22 [Homo sapiens] Length = 363 Score = 740 bits (1910), Expect = 0.0 Identities = 363/363 (100%), Positives = 363/363 (100%) Query: 1 MKRSLSENSARSTAGCLPVPLFNQKKRNRQPLTSNPLKDDSGISTPSDNYDFPPLPTDWA 60 MKRSLSENSARSTAGCLPVPLFNQKKRNRQPLTSNPLKDDSGISTPSDNYDFPPLPTDWA Sbjct: 1 MKRSLSENSARSTAGCLPVPLFNQKKRNRQPLTSNPLKDDSGISTPSDNYDFPPLPTDWA 60 Query: 61 WEAVNPELAPVMKTVDTGQIPHSASRPLRSQDSVFNSIQSNTGRSQGGWSYRDGNKNTSL 120 WEAVNPELAPVMKTVDTGQIPHSASRPLRSQDSVFNSIQSNTGRSQGGWSYRDGNKNTSL Sbjct: 61 WEAVNPELAPVMKTVDTGQIPHSASRPLRSQDSVFNSIQSNTGRSQGGWSYRDGNKNTSL 120 Query: 121 KTWNKNDFKPQCKRTNLVANDGKNSCPVSSGAQQQKQLRIPEPPNLSRNKETELLRQTHS 180 KTWNKNDFKPQCKRTNLVANDGKNSCPVSSGAQQQKQLRIPEPPNLSRNKETELLRQTHS Sbjct: 121 KTWNKNDFKPQCKRTNLVANDGKNSCPVSSGAQQQKQLRIPEPPNLSRNKETELLRQTHS 180 Query: 181 SKISGCTMRGLDKNSALQTLKPNFQQNQYKKQMLDDIPEDNTLKETSLYQLQFKEKASSL 240 SKISGCTMRGLDKNSALQTLKPNFQQNQYKKQMLDDIPEDNTLKETSLYQLQFKEKASSL Sbjct: 181 SKISGCTMRGLDKNSALQTLKPNFQQNQYKKQMLDDIPEDNTLKETSLYQLQFKEKASSL 240 Query: 241 RIISAVIESMKYWREHAQKTVLLFEVLAVLDSAVTPGPYYSKTFLMRDGKNTLPCVFYEI 300 RIISAVIESMKYWREHAQKTVLLFEVLAVLDSAVTPGPYYSKTFLMRDGKNTLPCVFYEI Sbjct: 241 RIISAVIESMKYWREHAQKTVLLFEVLAVLDSAVTPGPYYSKTFLMRDGKNTLPCVFYEI 300 Query: 301 DRELPRLIRGRVHRCVGNYDQKKNIFQCVSVRPASVSEQKTFQAFVKIADVEMQYYINVM 360 DRELPRLIRGRVHRCVGNYDQKKNIFQCVSVRPASVSEQKTFQAFVKIADVEMQYYINVM Sbjct: 301 DRELPRLIRGRVHRCVGNYDQKKNIFQCVSVRPASVSEQKTFQAFVKIADVEMQYYINVM 360 Query: 361 NET 363 NET Sbjct: 361 NET 363 >gi|161169017 neuron navigator 2 isoform 4 [Homo sapiens] Length = 1493 Score = 37.4 bits (85), Expect = 0.021 Identities = 56/202 (27%), Positives = 74/202 (36%), Gaps = 29/202 (14%) Query: 2 KRSLSENSARSTAGCLPVPLFNQKKRNR----QPLTSNPLKDDSGISTPSDNYDFPPLPT 57 + +S + + TA V F Q N Q LT + DS ++ + Sbjct: 712 QEKVSALTTQLTANAHLVAAFEQSLGNMTIRLQSLTMTAEQKDSELNELRKTIELLKKQN 771 Query: 58 DWAWEAVN-----PELAPVMKTVDTGQIPHSASRPLRSQDSVFNSIQSNTGRSQGGWSYR 112 A A+N PEL K T Q R S DSV +SI S T S G + Sbjct: 772 AAAQAAINGVINTPELN--CKGNGTAQSADLRIRRQHSSDSV-SSINSATSHSSVGSNIE 828 Query: 113 DGNKNTSLKTWNKNDFKPQCKRTNLVANDGKNSCPVS----SGAQQQKQLRIPEPPNLSR 168 +K K W ++ FK GK P S S ++ +P P L Sbjct: 829 SDSKKKKRKNWLRSSFKQAF---------GKKKSPKSASSHSDIEEMTDSSLPSSPKLPH 879 Query: 169 N---KETELLRQTHS-SKISGC 186 N T LLR +HS S IS C Sbjct: 880 NGSTGSTPLLRNSHSNSLISEC 901 >gi|161169015 neuron navigator 2 isoform 3 [Homo sapiens] Length = 2365 Score = 37.4 bits (85), Expect = 0.021 Identities = 56/202 (27%), Positives = 74/202 (36%), Gaps = 29/202 (14%) Query: 2 KRSLSENSARSTAGCLPVPLFNQKKRNR----QPLTSNPLKDDSGISTPSDNYDFPPLPT 57 + +S + + TA V F Q N Q LT + DS ++ + Sbjct: 1584 QEKVSALTTQLTANAHLVAAFEQSLGNMTIRLQSLTMTAEQKDSELNELRKTIELLKKQN 1643 Query: 58 DWAWEAVN-----PELAPVMKTVDTGQIPHSASRPLRSQDSVFNSIQSNTGRSQGGWSYR 112 A A+N PEL K T Q R S DSV +SI S T S G + Sbjct: 1644 AAAQAAINGVINTPELN--CKGNGTAQSADLRIRRQHSSDSV-SSINSATSHSSVGSNIE 1700 Query: 113 DGNKNTSLKTWNKNDFKPQCKRTNLVANDGKNSCPVS----SGAQQQKQLRIPEPPNLSR 168 +K K W ++ FK GK P S S ++ +P P L Sbjct: 1701 SDSKKKKRKNWLRSSFKQAF---------GKKKSPKSASSHSDIEEMTDSSLPSSPKLPH 1751 Query: 169 N---KETELLRQTHS-SKISGC 186 N T LLR +HS S IS C Sbjct: 1752 NGSTGSTPLLRNSHSNSLISEC 1773 >gi|38044282 neuron navigator 2 isoform 2 [Homo sapiens] Length = 2429 Score = 37.4 bits (85), Expect = 0.021 Identities = 56/202 (27%), Positives = 74/202 (36%), Gaps = 29/202 (14%) Query: 2 KRSLSENSARSTAGCLPVPLFNQKKRNR----QPLTSNPLKDDSGISTPSDNYDFPPLPT 57 + +S + + TA V F Q N Q LT + DS ++ + Sbjct: 1648 QEKVSALTTQLTANAHLVAAFEQSLGNMTIRLQSLTMTAEQKDSELNELRKTIELLKKQN 1707 Query: 58 DWAWEAVN-----PELAPVMKTVDTGQIPHSASRPLRSQDSVFNSIQSNTGRSQGGWSYR 112 A A+N PEL K T Q R S DSV +SI S T S G + Sbjct: 1708 AAAQAAINGVINTPELN--CKGNGTAQSADLRIRRQHSSDSV-SSINSATSHSSVGSNIE 1764 Query: 113 DGNKNTSLKTWNKNDFKPQCKRTNLVANDGKNSCPVS----SGAQQQKQLRIPEPPNLSR 168 +K K W ++ FK GK P S S ++ +P P L Sbjct: 1765 SDSKKKKRKNWLRSSFKQAF---------GKKKSPKSASSHSDIEEMTDSSLPSSPKLPH 1815 Query: 169 N---KETELLRQTHS-SKISGC 186 N T LLR +HS S IS C Sbjct: 1816 NGSTGSTPLLRNSHSNSLISEC 1837 >gi|54112420 Cas-Br-M (murine) ecotropic retroviral transforming sequence b [Homo sapiens] Length = 982 Score = 33.9 bits (76), Expect = 0.23 Identities = 31/82 (37%), Positives = 38/82 (46%), Gaps = 13/82 (15%) Query: 18 PVPLFNQKKRNRQPLTSNPLKDDSGISTPSDNYDF--PPLPTDWAWEAVNPELAPV---- 71 PVPL R P NP S TPSD YD PPL D A++A+ P L P Sbjct: 775 PVPL----PPARPPTRDNPKHGSSLNRTPSD-YDLLIPPLGED-AFDALPPSLPPPPPPA 828 Query: 72 -MKTVDTGQIPHSASRPLRSQD 92 ++ + P S+SRP QD Sbjct: 829 RHSLIEHSKPPGSSSRPSSGQD 850 >gi|189217904 RPGRIP1-like isoform b [Homo sapiens] Length = 1235 Score = 33.5 bits (75), Expect = 0.31 Identities = 39/177 (22%), Positives = 75/177 (42%), Gaps = 27/177 (15%) Query: 83 SASRPLRSQ---DSVFNSIQS--NTGRSQGGWSYRDGNKNTSLKTWNKNDFKPQ------ 131 SA + L++Q + +N++QS NTGR R N+N L+ + K Q Sbjct: 135 SAKQQLQTQGYRQTPYNNVQSRINTGR-------RKANENAGLQECPRKGIKFQDADVAE 187 Query: 132 ------CKRTNLVANDGKNSCPVSSGAQQQKQLRIPEPPNLSRNKETELLRQTHSSKISG 185 K N + + + Q ++ +I E +L+ +T+L R+ + ++S Sbjct: 188 TPHPMFTKYGNSLLEEARGEIRNLENVIQSQRGQIEELEHLAEILKTQLRRKENEIELSL 247 Query: 186 CTMRGLDKNSALQTLKPNFQQNQYKKQMLDDIPEDNTLKETSLYQLQFKEKASSLRI 242 +R ++ N + + KQ+++ + N L +Q +EK +LRI Sbjct: 248 LQLREQQATDQRSNIRDNVEMIKLHKQLVE---KSNALSAMEGKFIQLQEKQRTLRI 301 >gi|118442834 RPGRIP1-like isoform a [Homo sapiens] Length = 1315 Score = 33.5 bits (75), Expect = 0.31 Identities = 39/177 (22%), Positives = 75/177 (42%), Gaps = 27/177 (15%) Query: 83 SASRPLRSQ---DSVFNSIQS--NTGRSQGGWSYRDGNKNTSLKTWNKNDFKPQ------ 131 SA + L++Q + +N++QS NTGR R N+N L+ + K Q Sbjct: 135 SAKQQLQTQGYRQTPYNNVQSRINTGR-------RKANENAGLQECPRKGIKFQDADVAE 187 Query: 132 ------CKRTNLVANDGKNSCPVSSGAQQQKQLRIPEPPNLSRNKETELLRQTHSSKISG 185 K N + + + Q ++ +I E +L+ +T+L R+ + ++S Sbjct: 188 TPHPMFTKYGNSLLEEARGEIRNLENVIQSQRGQIEELEHLAEILKTQLRRKENEIELSL 247 Query: 186 CTMRGLDKNSALQTLKPNFQQNQYKKQMLDDIPEDNTLKETSLYQLQFKEKASSLRI 242 +R ++ N + + KQ+++ + N L +Q +EK +LRI Sbjct: 248 LQLREQQATDQRSNIRDNVEMIKLHKQLVE---KSNALSAMEGKFIQLQEKQRTLRI 301 >gi|239757046 PREDICTED: similar to hCG1790759 [Homo sapiens] Length = 737 Score = 32.0 bits (71), Expect = 0.89 Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 16/141 (11%) Query: 41 SGISTPSDNYDFPPLPTDWAWE---AVNPELAPVMKTVD-----TGQIPHSASRPLRSQD 92 SG+ TPS PP P AW+ +V P AP+ + V ++ + +R L S+ Sbjct: 152 SGLLTPSAARPDPPAPPAQAWDRRGSVTPTGAPIWELVSRVHGYQKEVVFTRNRDLLSKL 211 Query: 93 SVFNSIQSNTGRSQGGWSYRDGNKNTSLKTWNKNDFKPQCKRTNLVANDGKNSCPVSSGA 152 V G+ + G ++G + +K + Q T L A D + V SG Sbjct: 212 GV---CALEEGKDELGLQLKEGQEKEEMKCHDIRPRPSQRTLTRLPARDCQPCLWVPSGG 268 Query: 153 QQQKQLRIPEPPNLSRNKETE 173 L EP L R E Sbjct: 269 -----LSAGEPRRLLRQSVRE 284 >gi|239751558 PREDICTED: similar to hCG1790759 [Homo sapiens] Length = 771 Score = 32.0 bits (71), Expect = 0.89 Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 16/141 (11%) Query: 41 SGISTPSDNYDFPPLPTDWAWE---AVNPELAPVMKTVD-----TGQIPHSASRPLRSQD 92 SG+ TPS PP P AW+ +V P AP+ + V ++ + +R L S+ Sbjct: 186 SGLLTPSAARPDPPAPPAQAWDRRGSVTPTGAPIWELVSRVHGYQKEVVFTRNRDLLSKL 245 Query: 93 SVFNSIQSNTGRSQGGWSYRDGNKNTSLKTWNKNDFKPQCKRTNLVANDGKNSCPVSSGA 152 V G+ + G ++G + +K + Q T L A D + V SG Sbjct: 246 GV---CALEEGKDELGLQLKEGQEKEEMKCHDIRPRPSQRTLTRLPARDCQPCLWVPSGG 302 Query: 153 QQQKQLRIPEPPNLSRNKETE 173 L EP L R E Sbjct: 303 -----LSAGEPRRLLRQSVRE 318 >gi|169212818 PREDICTED: similar to hCG1790759 [Homo sapiens] Length = 771 Score = 32.0 bits (71), Expect = 0.89 Identities = 37/141 (26%), Positives = 55/141 (39%), Gaps = 16/141 (11%) Query: 41 SGISTPSDNYDFPPLPTDWAWE---AVNPELAPVMKTVD-----TGQIPHSASRPLRSQD 92 SG+ TPS PP P AW+ +V P AP+ + V ++ + +R L S+ Sbjct: 186 SGLLTPSAARPDPPAPPAQAWDRRGSVTPTGAPIWELVSRVHGYQKEVVFTRNRDLLSKL 245 Query: 93 SVFNSIQSNTGRSQGGWSYRDGNKNTSLKTWNKNDFKPQCKRTNLVANDGKNSCPVSSGA 152 V G+ + G ++G + +K + Q T L A D + V SG Sbjct: 246 GV---CALEEGKDELGLQLKEGQEKEEMKCHDIRPRPSQRTLTRLPARDCQPCLWVPSGG 302 Query: 153 QQQKQLRIPEPPNLSRNKETE 173 L EP L R E Sbjct: 303 -----LSAGEPRRLLRQSVRE 318 >gi|38788333 remodeling and spacing factor 1 [Homo sapiens] Length = 1441 Score = 30.8 bits (68), Expect = 2.0 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 5/67 (7%) Query: 133 KRTNLVANDGKNSCPVSSGAQQQKQLRIPEPPNLSRNKET-----ELLRQTHSSKISGCT 187 K T + D +S V Q+ Q+ P+PP + + ++ +L +T S CT Sbjct: 504 KETAPLRKDADSSISVLEIHSQKAQIEEPDPPEMETSLDSSEMAKDLSSKTALSSTESCT 563 Query: 188 MRGLDKN 194 M+G +K+ Sbjct: 564 MKGEEKS 570 >gi|4507877 vinculin isoform VCL [Homo sapiens] Length = 1066 Score = 30.0 bits (66), Expect = 3.4 Identities = 15/45 (33%), Positives = 20/45 (44%) Query: 51 DFPPLPTDWAWEAVNPELAPVMKTVDTGQIPHSASRPLRSQDSVF 95 DFPP P D + ELAP + G++P P +D F Sbjct: 841 DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEF 885 >gi|7669550 vinculin isoform meta-VCL [Homo sapiens] Length = 1134 Score = 30.0 bits (66), Expect = 3.4 Identities = 15/45 (33%), Positives = 20/45 (44%) Query: 51 DFPPLPTDWAWEAVNPELAPVMKTVDTGQIPHSASRPLRSQDSVF 95 DFPP P D + ELAP + G++P P +D F Sbjct: 841 DFPPPPPDLEQLRLTDELAPPKPPLPEGEVPPPRPPPPEEKDEEF 885 >gi|32261332 seizure related 6 homolog (mouse)-like precursor [Homo sapiens] Length = 1024 Score = 30.0 bits (66), Expect = 3.4 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 7/90 (7%) Query: 19 VPLFNQKKRNRQPLTSNPLKDDSGISTPSDNYDFPPLP------TDWAWEAVNPELAPVM 72 VPL+ +K + P T PL+ S P + P P D A EA + +P M Sbjct: 182 VPLWLDRKESAVPTTPAPLQISPFTSQPYVAHTLPQRPEPGEPGPDMAQEAPQEDTSP-M 240 Query: 73 KTVDTGQIPHSASRPLRSQDSVFNSIQSNT 102 +D G+ + S SQ++ ++I + T Sbjct: 241 ALMDKGENELTGSASEESQETTTSTIITTT 270 >gi|145580592 nesprin-3 [Homo sapiens] Length = 975 Score = 30.0 bits (66), Expect = 3.4 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 3/75 (4%) Query: 157 QLRIPEPPNLSRNKETELLRQTHSSKISGCTMRGLDKNSALQTLKPNFQQNQYKKQMLDD 216 Q+R+ L R+ +Q S++ G GLD + ++ +P Q+N + +D Sbjct: 568 QVRVQAEKGLQRDLPG---KQAQLSRLQGLQEEGLDLGAQMEAARPLVQENPNHQHKMDQ 624 Query: 217 IPEDNTLKETSLYQL 231 + D + SL L Sbjct: 625 LSSDFQALQRSLEDL 639 >gi|136255216 proline-rich transmembrane protein 3 [Homo sapiens] Length = 981 Score = 30.0 bits (66), Expect = 3.4 Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 4/61 (6%) Query: 158 LRIPEPPNLSRNKETELLRQ--THSSKISGCTMRGLDKNSALQTLKPNFQQNQYKKQMLD 215 LR P P NLSR+ + L R+ S C +RGL L+P ++ + K LD Sbjct: 804 LRPPSPINLSRSIDAALFREHLVRDSVFQRCGLRGLASPPPGGALRP--RRGSHPKAELD 861 Query: 216 D 216 D Sbjct: 862 D 862 >gi|108860697 zinc finger protein 592 [Homo sapiens] Length = 1267 Score = 30.0 bits (66), Expect = 3.4 Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 8/59 (13%) Query: 5 LSENSARSTAGCL------PVPLFNQKKRNRQPLTSNPLKDDSGISTP--SDNYDFPPL 55 ++ +SARS G L P+P FNQ P +P+KD+ P SD+Y PPL Sbjct: 115 MNGDSARSFPGKLEPPKSEPLPTFNQFSPISSPEPEDPIKDNGFGIKPKHSDSYFPPPL 173 >gi|221139728 pleckstrin homology domain containing, family M (with RUN domain) member 2 [Homo sapiens] Length = 1019 Score = 29.6 bits (65), Expect = 4.4 Identities = 47/190 (24%), Positives = 78/190 (41%), Gaps = 50/190 (26%) Query: 32 LTSNPLK-DDSGISTPSDNYD----FPPLP----TDWAWEAVNPELAPVMKTVDTGQIPH 82 +TS L+ DDS I+ S++YD FP +P TDW + G + Sbjct: 200 VTSTNLEWDDSAIAPSSEDYDFGDVFPAVPSVPSTDW----------------EDGDLTD 243 Query: 83 SASRPLRSQDSVFNSIQSNTGRSQGGWSYRDGNKNTSLKTWNKNDFKPQCKRTNLVANDG 142 + S P RS S S +++T RS T +N F + T Sbjct: 244 TVSGP-RSTASDLTSSKAST-RS---------------PTQRQNPFNEEPAET----VSS 282 Query: 143 KNSCPVSSGAQQQKQLRIPEPPNLSRNKETELLRQTHSSKISGCTMRGLDKNSALQTLKP 202 ++ PV + +Q++++ + +PP+ E E++R T KI D+ ++ L P Sbjct: 283 SDTTPVHTTSQEKEEAQALDPPDAC--TELEVIRVTKKKKIGKKKKSRSDEEAS--PLHP 338 Query: 203 NFQQNQYKKQ 212 Q + KQ Sbjct: 339 ACSQKKCAKQ 348 >gi|4557365 Bloom syndrome protein [Homo sapiens] Length = 1417 Score = 29.3 bits (64), Expect = 5.8 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 1/77 (1%) Query: 25 KKRNRQPLTSNPLKDDSGISTPSDNYDFPPLPTDWAWEAVNPELAPVMKTVDTGQIPHSA 84 K +N+ + N L+ ++ S DN+D D WE + LA K+ P Sbjct: 531 KDQNKHTASINDLERETQPSYDIDNFDIDDFDDDDDWEDIMHNLA-ASKSSTAAYQPIKE 589 Query: 85 SRPLRSQDSVFNSIQSN 101 RP++S +S +++ Sbjct: 590 GRPIKSVSERLSSAKTD 606 >gi|149944496 UBX domain containing 7 [Homo sapiens] Length = 489 Score = 29.3 bits (64), Expect = 5.8 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 8/53 (15%) Query: 21 LFNQKKRNRQPLTSNPLKDDSGIST--------PSDNYDFPPLPTDWAWEAVN 65 L ++K+ NR+PLT P++ D G +T S+ + PP D E ++ Sbjct: 355 LGHRKEENRRPLTEPPVRTDPGTATNHQGLPAVDSEILEMPPEKADGVVEGID 407 >gi|153792190 neurogenic differentiation 4 [Homo sapiens] Length = 331 Score = 28.9 bits (63), Expect = 7.5 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 9/58 (15%) Query: 3 RSLSENSARSTAGCL---PVPLFNQKKRNRQPLTSNPLKDDSGISTPSDNYDFPPLPT 57 + LS+ ++ AGCL P + +K ++ P+ DS IS + NY P LP+ Sbjct: 160 KGLSQPTSNLVAGCLQLGPQSVLLEKHEDKSPIC------DSAISVHNFNYQSPGLPS 211 >gi|4758646 kinesin family member 3B [Homo sapiens] Length = 747 Score = 28.5 bits (62), Expect = 9.8 Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 12/100 (12%) Query: 152 AQQQKQLRIPEPPNLSRNKETELLRQTHSSKISGCTMRGLDKNSALQT--LKPNFQQNQY 209 A+Q+++ R + SR++ET L++T+SS L + ++T LK F + Q Sbjct: 500 AEQKRREREIQQQMESRDEETLELKETYSS---------LQQEVDIKTKKLKKLFSKLQA 550 Query: 210 KKQMLDDIPEDNTLKETSLYQLQFKEKASSLRIISAVIES 249 K + D+ E++ + L Q Q E L++ +IE+ Sbjct: 551 VKAEIHDLQEEHIKERQELEQTQ-NELTRELKLKHLIIEN 589 >gi|57863310 stromal antigen 3 [Homo sapiens] Length = 1225 Score = 28.5 bits (62), Expect = 9.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Query: 61 WEAVNPELAPVMKTVDTGQIPHSASRP 87 WE P + K VDTG++PH P Sbjct: 718 WELYEPCCQLLQKAVDTGEVPHQVILP 744 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.314 0.129 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 14,231,646 Number of Sequences: 37866 Number of extensions: 660515 Number of successful extensions: 1453 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 5 Number of HSP's successfully gapped in prelim test: 18 Number of HSP's that attempted gapping in prelim test: 1447 Number of HSP's gapped (non-prelim): 24 length of query: 363 length of database: 18,247,518 effective HSP length: 104 effective length of query: 259 effective length of database: 14,309,454 effective search space: 3706148586 effective search space used: 3706148586 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.